Moc06g14930 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g14930
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Girdin-like
Location	chr6: 11711233 .. 11714004 (+)
RNA-Seq Expression	Moc06g14930
Synteny	Moc06g14930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCAGTAAGGCTCTTACCCAACAGTGGAGAGAGCAAGACCAAGAAGTTGTCCGTCAATGGTCAGAGAACATGCAGCATACTCATGGTGACGCATTATCACATAATGTAATCATGCCATTTCAAAATGTAACGTTTACAGAAAATCAACTGGATATCTTGAAACGTTTATGGGAAGGTTTAAGACCAGATAGAAAGACCCAGTTCATAAAAAAATATGGCCACATAGCGCAGCTCCTGTACGTGCGAGTAAACTTCTCAGTGTTAAGAGCATTAGTTCGACATTGGGATCCGGCCTATCGATGCTTTACTTTTAGCTCAATGGATATAACCCCAACTATCGAGGAATACCACACCCTCTTACAAATACCACTACAAGAGAAAATTGAGGTTTATTCCTATGATGGTGAGTTTACGTTGAGAAGGGCAGTATCGCTGCTTGTAGGCAAGATATCTGCTGGTGAGATTGAAAAACATGTGAAAAGGAAAGGAGAAAACACATTCTTGTCGATAGAATATATCTTGAGTCTTCAGCAGAGATTCGTTAATGAAGAAAGAGAGCTATCGCTATTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGGTACGTTGAAGAGCGGGTGGTCAAGCAATTTGTCAAGGTATAGATGGGGGTTAATCTCGTAATACCCATCCTTGCAGAAACTTTCCGAGCACTAAATTTTTGCAGATCGAGAGGAGTAGGGAAATTTATAAGCTGTGCTCAGCTGCTATACATTTGGATCCTCAGCCATATAAATTGTCCACCATAGTTCAAGTGTCCTCAGGTCAAATTTTCAAGATTGTGGAGTAGATTACAAAATCCCATCCTTGAATTCAACCAAGGGGATTGTGGTCAAATCTACCCAGGGAAAGAAGAATTGAGCATTTTCTTTCCAGGACTAAAGCTATAAGACGTAGAGTGGAGGGCCCGATGGATGTCAATTAAACCTATGATGTATAGGTGTGGTAAATTTCACAGTCTACCATTATTGGGTCCATGGGGATGTTTATCTTATGCCCTATTAATGGTACTGCGCCAGATATGGGTACGTCAGTTTATCCCAGCCACACATGACTTAAGAAACTCTGAATTTGCCTATGATTTTGGGTTTTGCAAAAACAAAATTTAGGAGGTCGTAAAGGCGTGGAAGGCGATTGTCAGAATCCAAAGTGGCAATTACCACGATAATATATTTGAAGGATACGAACAGTGGCATTCGAGTAGGGGAAAAACTGTGGTTCTCCTACCAACCGACAAGGGCAAATGGAAGCTAGAGGTTCCCACTAGGATAATTCTTTCTGAAATGAGTTGAAATCAGTCCACTCAGCGGACGGTTCACAAGATAGAATACGAGCTGCGAGAAGGGGACCCCACATTAGCTAAAGAAAGACTACAACTAGGGTTCAGTCAAAACCTACCTCGAAGCATTGAGCTGGAATTACAGCAGGCAAGAAGGGAGGTCAGTTACCAAGGGAAAGAAAACACACTACTAGAAGTAGTGGTTCGGGACCCTAACAGAAGAAAGTATGAAGAGAGCTTACAAGCAGTCTTGAGGGCGCGAGACAATCAAATATCACAACAAATATCTTCTCTACAAACAAAAATCATGTCCCTTCGTGAAAAAGCCATTGTGTTGGAGGAGAAAGAAGCACAGTTAGCTCAGTATGCTCAAGAAAGTCAAAGATTAAGGGAAACTGTTCAGGCGCTTTCAAGCCGTCTCAACAAAACCCATAATGATGTTGATGGGTTAATGCAACAACCAAGTGGGGTATGAATTAGACCATGTGAGGCGTGATAACACATTGTTGCATCATAATTCAGAACATGTACTCACCCAAGTCAGATAGGCAGCCCGTAGGGCAGATGGTTTAGCTGAAGAGGCACGAGCTCTCACGTCTGCCATTGCCCCTACACAGTCAAATGGCAAAAGCACACTCAAGTTCTTAGGCAAACTTCGGCAAGATCAAGAGCATTGGGGACAATTTTATTGACACTCTGCTTTAATGTACTTTCAATTTCATGATTTAAGCATGGGGGTTCAAATTTGGCATAATTGTTGTTTTCTTGTAATCTTTTATTTATTTATTTATCCAATTTATAATAAAGCCACGAACTTATTTATATATGGTTTCTTTCTCCTTCTTTTTGTCTTCTATTTTTCTAAAAACGAAAGGGATTGTTCAAGATAGCTCGCTCACCGGCACCACATCGCACTTACCGTACCAGACACAGGGCAAGATTAATGATGAAAGATCAAAAGGCCAAGCAGGAGAAAACAAGGAAGGATATTGAGGAGTTGCGCGAAAAGTTAGATGTCATCCTCCTCGCGTTGGAAAAAGGCAAAGCGGCTACGGATTCTGCTACATCTAGCAACCCTGTCCATGAGCCGCAAGAAACCTCACCTTATCCATCTAGGTACGGTTCACCTCTTAGGTCAGTGGTAGAGGATTTCATGCCACAATATACAACGTACAACCCTCTGTATGACGTCCTGCATCCCTTTGTTAAGGGAGCTCAGCAAATCCCAAACAACATCATTTTTCAAGAGCCTGAGCAAATGATGTCACCCCCTACAGTCCTTAATCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTGGGACAAAGTGCTCCCAGTAAAGAGAAGTTCGAAGTTCTGGAGGAAATATTAAGAGCAGTAGAGGGGACGAACGTTTTTGGCAACATCGATACCTCACAATTGTGCTTGGTGTCTTAA

mRNA sequence

ATGAGTTCCAGTAAGGCTCTTACCCAACAGTGGAGAGAGCAAGACCAAGAAGTTGTCCGTCAATGGTCAGAGAACATGCAGCATACTCATGGTGACGCATTATCACATAATGTAATCATGCCATTTCAAAATGTAACGTTTACAGAAAATCAACTGGATATCTTGAAACGTTTATGGGAAGGTTTAAGACCAGATAGAAAGACCCAGTTCATAAAAAAATATGGCCACATAGCGCAGCTCCTGTACGTGCGAGTAAACTTCTCAGTGTTAAGAGCATTAGTTCGACATTGGGATCCGGCCTATCGATGCTTTACTTTTAGCTCAATGGATATAACCCCAACTATCGAGGAATACCACACCCTCTTACAAATACCACTACAAGAGAAAATTGAGGTTTATTCCTATGATGGTGAGTTTACGTTGAGAAGGGCAGTATCGCTGCTTGTAGGCAAGATATCTGCTGGTGAGATTGAAAAACATGTGAAAAGGAAAGGAGAAAACACATTCTTGTCGATAGAATATATCTTGAGTCTTCAGCAGAGATTCGTTAATGAAGAAAGAGAGCTATCGCTATTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGGTACGTTGAAGAGCGGGTGGTCAAGCAATTTGTCAAGTCCACTCAGCGGACGGTTCACAAGATAGAATACGAGCTGCGAGAAGGGGACCCCACATTAGCTAAAGAAAGACTACAACTAGGGTTCAGTCAAAACCTACCTCGAAGCATTGAGCTGGAATTACAGCAGGCAAGAAGGGAGGTCAGTTACCAAGGGAAAGAAAACACACTACTAGAAGTAGTGGTTCGGGACCCTAACAGAAGAAAGTATGAAGAGAGCTTACAAGCAGTCTTGAGGGCGCGAGACAATCAAATATCACAACAAATATCTTCTCTACAAACAAAAATCATGTCCCTTCGTGAAAAAGCCATTGTGTTGGAGGAGAAAGAAGCACAGTTAGCTCAGTATGCTCAAGAAAGTCAAAGATTAAGGGAAACTGTTCAGGCGCTTTCAAGCCGTCTCAACAAAACCCATAATGATGTTGATGGGTTAATGCAACAACCAAGTGGGGGATTGTTCAAGATAGCTCGCTCACCGGCACCACATCGCACTTACCGTACCAGACACAGGGCAAGATTAATGATGAAAGATCAAAAGGCCAAGCAGGAGAAAACAAGGAAGGATATTGAGGAGTTGCGCGAAAAGTTAGATGTCATCCTCCTCGCGTTGGAAAAAGGCAAAGCGGCTACGGATTCTGCTACATCTAGCAACCCTGTCCATGAGCCGCAAGAAACCTCACCTTATCCATCTAGGTACGGTTCACCTCTTAGGTCAGTGGTAGAGGATTTCATGCCACAATATACAACGTACAACCCTCTGTATGACGTCCTGCATCCCTTTGTTAAGGGAGCTCAGCAAATCCCAAACAACATCATTTTTCAAGAGCCTGAGCAAATGATGTCACCCCCTACAGTCCTTAATCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTGGGACAAAGTGCTCCCAGTAAAGAGAAGTTCGAAGTTCTGGAGGAAATATTAAGAGCAGTAGAGGGGACGAACGTTTTTGGCAACATCGATACCTCACAATTGTGCTTGGTGTCTTAA

Coding sequence (CDS)

ATGAGTTCCAGTAAGGCTCTTACCCAACAGTGGAGAGAGCAAGACCAAGAAGTTGTCCGTCAATGGTCAGAGAACATGCAGCATACTCATGGTGACGCATTATCACATAATGTAATCATGCCATTTCAAAATGTAACGTTTACAGAAAATCAACTGGATATCTTGAAACGTTTATGGGAAGGTTTAAGACCAGATAGAAAGACCCAGTTCATAAAAAAATATGGCCACATAGCGCAGCTCCTGTACGTGCGAGTAAACTTCTCAGTGTTAAGAGCATTAGTTCGACATTGGGATCCGGCCTATCGATGCTTTACTTTTAGCTCAATGGATATAACCCCAACTATCGAGGAATACCACACCCTCTTACAAATACCACTACAAGAGAAAATTGAGGTTTATTCCTATGATGGTGAGTTTACGTTGAGAAGGGCAGTATCGCTGCTTGTAGGCAAGATATCTGCTGGTGAGATTGAAAAACATGTGAAAAGGAAAGGAGAAAACACATTCTTGTCGATAGAATATATCTTGAGTCTTCAGCAGAGATTCGTTAATGAAGAAAGAGAGCTATCGCTATTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGGTACGTTGAAGAGCGGGTGGTCAAGCAATTTGTCAAGTCCACTCAGCGGACGGTTCACAAGATAGAATACGAGCTGCGAGAAGGGGACCCCACATTAGCTAAAGAAAGACTACAACTAGGGTTCAGTCAAAACCTACCTCGAAGCATTGAGCTGGAATTACAGCAGGCAAGAAGGGAGGTCAGTTACCAAGGGAAAGAAAACACACTACTAGAAGTAGTGGTTCGGGACCCTAACAGAAGAAAGTATGAAGAGAGCTTACAAGCAGTCTTGAGGGCGCGAGACAATCAAATATCACAACAAATATCTTCTCTACAAACAAAAATCATGTCCCTTCGTGAAAAAGCCATTGTGTTGGAGGAGAAAGAAGCACAGTTAGCTCAGTATGCTCAAGAAAGTCAAAGATTAAGGGAAACTGTTCAGGCGCTTTCAAGCCGTCTCAACAAAACCCATAATGATGTTGATGGGTTAATGCAACAACCAAGTGGGGGATTGTTCAAGATAGCTCGCTCACCGGCACCACATCGCACTTACCGTACCAGACACAGGGCAAGATTAATGATGAAAGATCAAAAGGCCAAGCAGGAGAAAACAAGGAAGGATATTGAGGAGTTGCGCGAAAAGTTAGATGTCATCCTCCTCGCGTTGGAAAAAGGCAAAGCGGCTACGGATTCTGCTACATCTAGCAACCCTGTCCATGAGCCGCAAGAAACCTCACCTTATCCATCTAGGTACGGTTCACCTCTTAGGTCAGTGGTAGAGGATTTCATGCCACAATATACAACGTACAACCCTCTGTATGACGTCCTGCATCCCTTTGTTAAGGGAGCTCAGCAAATCCCAAACAACATCATTTTTCAAGAGCCTGAGCAAATGATGTCACCCCCTACAGTCCTTAATCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTGGGACAAAGTGCTCCCAGTAAAGAGAAGTTCGAAGTTCTGGAGGAAATATTAAGAGCAGTAGAGGGGACGAACGTTTTTGGCAACATCGATACCTCACAATTGTGCTTGGTGTCTTAA

Protein sequence

MSSSKALTQQWREQDQEVVRQWSENMQHTHGDALSHNVIMPFQNVTFTENQLDILKRLWEGLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALVRHWDPAYRCFTFSSMDITPTIEEYHTLLQIPLQEKIEVYSYDGEFTLRRAVSLLVGKISAGEIEKHVKRKGENTFLSIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEERVVKQFVKSTQRTVHKIEYELREGDPTLAKERLQLGFSQNLPRSIELELQQARREVSYQGKENTLLEVVVRDPNRRKYEESLQAVLRARDNQISQQISSLQTKIMSLREKAIVLEEKEAQLAQYAQESQRLRETVQALSSRLNKTHNDVDGLMQQPSGGLFKIARSPAPHRTYRTRHRARLMMKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRYGSPLRSVVEDFMPQYTTYNPLYDVLHPFVKGAQQIPNNIIFQEPEQMMSPPTVLNLGGLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS

Homology

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BLAST of Moc06g14930 vs. NCBI nr
Match: XP_022147190.1 (uncharacterized protein LOC111016201 [Momordica charantia])

HSP 1 Score: 469.9 bits (1208), Expect = 3.0e-128
Identity = 298/545 (54.68%), Postives = 345/545 (63.30%), Query Frame = 0


Query: 1   MSSSKALTQQWREQDQEVVRQWSENMQHTHGDALSHNVIMPFQNVTFTENQLDILKRLWE 60
           MSSSK  TQ+WR+QDQE+V QWSENMQHTHGDALS NVIMPF NVTF ENQLD LKRLWE
Sbjct: 1   MSSSKVPTQEWRKQDQEIVCQWSENMQHTHGDALSQNVIMPFPNVTFPENQLDTLKRLWE 60

Query: 61  GLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALVRHWDPAYRCFTFSSMDITPTIEEYHT 120
           GLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALV+HWDP YRCFTFSSMDITPTIEEYHT
Sbjct: 61  GLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALVQHWDPPYRCFTFSSMDITPTIEEYHT 120

Query: 121 LLQIPLQEKIEVYSYDGEFTLRRAVSLLVGKISAGEIEKHVKRKGENTFLSIEYILSLQQ 180
           LLQIPLQEKIEVYSYDG FTL+RAVSLLVGKISA EIEKHVKRKGENT L IEYI SLQ 
Sbjct: 121 LLQIPLQEKIEVYSYDGGFTLKRAVSLLVGKISAXEIEKHVKRKGENTCLPIEYIXSLQX 180

Query: 181 RFVNEERELSLLALCLFNLVLFPKVSGYVEERVVKQFVKSTQRTVHKIEYELREGDPTLA 240
           RFVNEERELSLLALCLFNLVLFP VS YVEE VVK FV        K+E  +    P LA
Sbjct: 181 RFVNEERELSLLALCLFNLVLFPXVSXYVEEXVVKLFV--------KVEMGVNLVIPILA 240

Query: 241 KERLQLGF--SQNLPRSI------------------ELELQQARREVSYQGKENTLLEVV 300
           +    L F  S+ + + I                  E +  Q +   S+   +N +LE  
Sbjct: 241 ETFRALNFCRSRGVGKFIGCAQLLYIWILSHINCPPEFKCPQVKFSRSWSRLQNLMLEFN 300

Query: 301 VRD-----PNRRKYEESLQAVLRARDNQISQQISSLQ----------------------- 360
             D     P + ++     A LR  D +   +  S +                       
Sbjct: 301 QADWSQIHPGKEEW-SIFFAGLRPEDVEWRARWMSTKPMMYRCGKFHSLSLLGPWGCVSY 360

Query: 361 TKIMSLRE---KAIVLEEKEAQLAQYAQE----SQRLRETVQALSS----RLNKTHNDV- 420
             +M LR+   +  +    + + +++A +      +++E V+A  +    +    H+++ 
Sbjct: 361 APLMVLRQIWVRQFIPATHDLRNSEFAYDIGFCKNKIQEVVKAWKTIVRIQSGNYHDNIF 420

Query: 421 ----------------------DGLMQQPS---------------GGLFKIARSPAPHRT 449
                                  G ++ P+                GLFKIARS APHRT
Sbjct: 421 EGYEKWHSSRGKTVVLLPTDKGKGKLEVPTRRILSEMSPNQSTQRKGLFKIARSLAPHRT 480

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BLAST of Moc06g14930 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 251.9 bits (642), Expect = 1.3e-62
Identity = 131/167 (78.44%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 394 MKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRYGS 453
           M+DQKA+QEKTRKDIEELREKLD I L LEKGKA  D ATSSNP+HEPQET PYP  YG 
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 454 PLRSVVEDFMPQYTTYNPLYDV-----LHPFVKGAQQIPNNIIFQEPEQMMSPPTVLNLG 513
           PLR V E FMPQYTTYNPLYDV      H FVKGAQQIP NIIF+EPEQMMSPPTV NLG
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVXNLG 120

Query: 514 GLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS 556
           G PAKTDPV Q+A S EK EVLEE LRA+EGT+VFGNID SQLCLVS
Sbjct: 121 GXPAKTDPVXQNAXSXEKXEVLEERLRAIEGTDVFGNIDASQLCLVS 167

[Close]

BLAST of Moc06g14930 vs. NCBI nr
Match: XP_022149382.1 (uncharacterized protein LOC111017812 [Momordica charantia])

HSP 1 Score: 239.6 bits (610), Expect = 6.5e-59
Identity = 127/167 (76.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 394 MKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRYGS 453
           MKDQKA+QEK RKDIEELREKLDVILLALEKGK   D  TSSNPVH+ QE  PYP  Y  
Sbjct: 1   MKDQKAEQEKIRKDIEELREKLDVILLALEKGKTVADPTTSSNPVHDQQEIPPYPLGYDP 60

Query: 454 PLRSVVEDFMPQYTTYNPLYDVL-----HPFVKGAQQIPNNIIFQEPEQMMSPPTVLNLG 513
           PLR V E FM Q TTYNPLYD+L      PFVKG QQIP NIIF+EPEQMM PPTVLNLG
Sbjct: 61  PLRLVAEGFMQQNTTYNPLYDILVGQYPPPFVKGTQQIPTNIIFREPEQMMPPPTVLNLG 120

Query: 514 GLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS 556
           GL  KTDPVGQS PS EKFEVLEE L AVEGT+VFGNID SQLCL+S
Sbjct: 121 GLLVKTDPVGQSTPSNEKFEVLEERLIAVEGTDVFGNIDASQLCLIS 167

[Close]

BLAST of Moc06g14930 vs. NCBI nr
Match: XP_022150759.1 (uncharacterized protein LOC111018820 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-47
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 109 MDITPTIEEYHTLLQIPLQEKIEVYSYDGEFTLRRAVSLLVGKISAGEIEKHVKRKGENT 168
           M+ITPTI+EYHTLLQIPLQEKIEVYSYDG FTL+RAVSLLVGKISAGEIEKHVKRKGENT
Sbjct: 1   MEITPTIKEYHTLLQIPLQEKIEVYSYDGGFTLKRAVSLLVGKISAGEIEKHVKRKGENT 60

Query: 169 FLSIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEERVVKQFVKSTQR 224
            L IEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEER+VK FVK   R
Sbjct: 61  CLPIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEERLVKLFVKVEMR 115

[Close]

BLAST of Moc06g14930 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-42
Identity = 107/175 (61.14%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 393 MMKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRY- 452
           M  D+K++QEKTRKDIEELREKLD ILLALEKGK     A +SNP+HEP  T  +P  + 
Sbjct: 1   MEDDRKSEQEKTRKDIEELREKLDAILLALEKGKTI---AETSNPIHEP-PTPQFPPGFE 60

Query: 453 ------GSPLRSVVEDFMPQYTTYNPLYDV-----LHPFVKGAQQIPNNIIFQEPEQMMS 512
                 G   R + E FM QYTTYNPLYD+       P V+G  Q P  IIFQEPEQ+++
Sbjct: 61  PSFRPAGPSFRPMTEGFMSQYTTYNPLYDIPAGQFPPPLVRGPPQAPAGIIFQEPEQVIA 120

Query: 513 PPTVLNLGGLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS 556
           PPTVLNLGG  A  DP  Q APS EK EVLEE LRAVEGT+VFGNID SQLCL S
Sbjct: 121 PPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLXS 171

[Close]

BLAST of Moc06g14930 vs. ExPASy TrEMBL
Match: A0A6J1CZG4 (uncharacterized protein LOC111016201 OS=Momordica charantia OX=3673 GN=LOC111016201 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 298/545 (54.68%), Postives = 345/545 (63.30%), Query Frame = 0


Query: 1   MSSSKALTQQWREQDQEVVRQWSENMQHTHGDALSHNVIMPFQNVTFTENQLDILKRLWE 60
           MSSSK  TQ+WR+QDQE+V QWSENMQHTHGDALS NVIMPF NVTF ENQLD LKRLWE
Sbjct: 1   MSSSKVPTQEWRKQDQEIVCQWSENMQHTHGDALSQNVIMPFPNVTFPENQLDTLKRLWE 60

Query: 61  GLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALVRHWDPAYRCFTFSSMDITPTIEEYHT 120
           GLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALV+HWDP YRCFTFSSMDITPTIEEYHT
Sbjct: 61  GLRPDRKTQFIKKYGHIAQLLYVRVNFSVLRALVQHWDPPYRCFTFSSMDITPTIEEYHT 120

Query: 121 LLQIPLQEKIEVYSYDGEFTLRRAVSLLVGKISAGEIEKHVKRKGENTFLSIEYILSLQQ 180
           LLQIPLQEKIEVYSYDG FTL+RAVSLLVGKISA EIEKHVKRKGENT L IEYI SLQ 
Sbjct: 121 LLQIPLQEKIEVYSYDGGFTLKRAVSLLVGKISAXEIEKHVKRKGENTCLPIEYIXSLQX 180

Query: 181 RFVNEERELSLLALCLFNLVLFPKVSGYVEERVVKQFVKSTQRTVHKIEYELREGDPTLA 240
           RFVNEERELSLLALCLFNLVLFP VS YVEE VVK FV        K+E  +    P LA
Sbjct: 181 RFVNEERELSLLALCLFNLVLFPXVSXYVEEXVVKLFV--------KVEMGVNLVIPILA 240

Query: 241 KERLQLGF--SQNLPRSI------------------ELELQQARREVSYQGKENTLLEVV 300
           +    L F  S+ + + I                  E +  Q +   S+   +N +LE  
Sbjct: 241 ETFRALNFCRSRGVGKFIGCAQLLYIWILSHINCPPEFKCPQVKFSRSWSRLQNLMLEFN 300

Query: 301 VRD-----PNRRKYEESLQAVLRARDNQISQQISSLQ----------------------- 360
             D     P + ++     A LR  D +   +  S +                       
Sbjct: 301 QADWSQIHPGKEEW-SIFFAGLRPEDVEWRARWMSTKPMMYRCGKFHSLSLLGPWGCVSY 360

Query: 361 TKIMSLRE---KAIVLEEKEAQLAQYAQE----SQRLRETVQALSS----RLNKTHNDV- 420
             +M LR+   +  +    + + +++A +      +++E V+A  +    +    H+++ 
Sbjct: 361 APLMVLRQIWVRQFIPATHDLRNSEFAYDIGFCKNKIQEVVKAWKTIVRIQSGNYHDNIF 420

Query: 421 ----------------------DGLMQQPS---------------GGLFKIARSPAPHRT 449
                                  G ++ P+                GLFKIARS APHRT
Sbjct: 421 EGYEKWHSSRGKTVVLLPTDKGKGKLEVPTRRILSEMSPNQSTQRKGLFKIARSLAPHRT 480

[Close]

BLAST of Moc06g14930 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.2e-63
Identity = 131/167 (78.44%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 394 MKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRYGS 453
           M+DQKA+QEKTRKDIEELREKLD I L LEKGKA  D ATSSNP+HEPQET PYP  YG 
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 454 PLRSVVEDFMPQYTTYNPLYDV-----LHPFVKGAQQIPNNIIFQEPEQMMSPPTVLNLG 513
           PLR V E FMPQYTTYNPLYDV      H FVKGAQQIP NIIF+EPEQMMSPPTV NLG
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVXNLG 120

Query: 514 GLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS 556
           G PAKTDPV Q+A S EK EVLEE LRA+EGT+VFGNID SQLCLVS
Sbjct: 121 GXPAKTDPVXQNAXSXEKXEVLEERLRAIEGTDVFGNIDASQLCLVS 167

[Close]

BLAST of Moc06g14930 vs. ExPASy TrEMBL
Match: A0A6J1D7T3 (uncharacterized protein LOC111017812 OS=Momordica charantia OX=3673 GN=LOC111017812 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-59
Identity = 127/167 (76.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 394 MKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRYGS 453
           MKDQKA+QEK RKDIEELREKLDVILLALEKGK   D  TSSNPVH+ QE  PYP  Y  
Sbjct: 1   MKDQKAEQEKIRKDIEELREKLDVILLALEKGKTVADPTTSSNPVHDQQEIPPYPLGYDP 60

Query: 454 PLRSVVEDFMPQYTTYNPLYDVL-----HPFVKGAQQIPNNIIFQEPEQMMSPPTVLNLG 513
           PLR V E FM Q TTYNPLYD+L      PFVKG QQIP NIIF+EPEQMM PPTVLNLG
Sbjct: 61  PLRLVAEGFMQQNTTYNPLYDILVGQYPPPFVKGTQQIPTNIIFREPEQMMPPPTVLNLG 120

Query: 514 GLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS 556
           GL  KTDPVGQS PS EKFEVLEE L AVEGT+VFGNID SQLCL+S
Sbjct: 121 GLLVKTDPVGQSTPSNEKFEVLEERLIAVEGTDVFGNIDASQLCLIS 167

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BLAST of Moc06g14930 vs. ExPASy TrEMBL
Match: A0A6J1DB13 (uncharacterized protein LOC111018820 OS=Momordica charantia OX=3673 GN=LOC111018820 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.5e-48
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 109 MDITPTIEEYHTLLQIPLQEKIEVYSYDGEFTLRRAVSLLVGKISAGEIEKHVKRKGENT 168
           M+ITPTI+EYHTLLQIPLQEKIEVYSYDG FTL+RAVSLLVGKISAGEIEKHVKRKGENT
Sbjct: 1   MEITPTIKEYHTLLQIPLQEKIEVYSYDGGFTLKRAVSLLVGKISAGEIEKHVKRKGENT 60

Query: 169 FLSIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEERVVKQFVKSTQR 224
            L IEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEER+VK FVK   R
Sbjct: 61  CLPIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGYVEERLVKLFVKVEMR 115

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BLAST of Moc06g14930 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.1e-43
Identity = 107/175 (61.14%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 393 MMKDQKAKQEKTRKDIEELREKLDVILLALEKGKAATDSATSSNPVHEPQETSPYPSRY- 452
           M  D+K++QEKTRKDIEELREKLD ILLALEKGK     A +SNP+HEP  T  +P  + 
Sbjct: 1   MEDDRKSEQEKTRKDIEELREKLDAILLALEKGKTI---AETSNPIHEP-PTPQFPPGFE 60

Query: 453 ------GSPLRSVVEDFMPQYTTYNPLYDV-----LHPFVKGAQQIPNNIIFQEPEQMMS 512
                 G   R + E FM QYTTYNPLYD+       P V+G  Q P  IIFQEPEQ+++
Sbjct: 61  PSFRPAGPSFRPMTEGFMSQYTTYNPLYDIPAGQFPPPLVRGPPQAPAGIIFQEPEQVIA 120

Query: 513 PPTVLNLGGLPAKTDPVGQSAPSKEKFEVLEEILRAVEGTNVFGNIDTSQLCLVS 556
           PPTVLNLGG  A  DP  Q APS EK EVLEE LRAVEGT+VFGNID SQLCL S
Sbjct: 121 PPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLXS 171

The following BLAST results are available for this feature:

BLAST of Moc06g14930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147190.1	3.0e-128	54.68	uncharacterized protein LOC111016201 [Momordica charantia]	[more]
XP_022157796.1	1.3e-62	78.44	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022149382.1	6.5e-59	76.05	uncharacterized protein LOC111017812 [Momordica charantia]	[more]
XP_022150759.1	2.0e-47	90.43	uncharacterized protein LOC111018820 [Momordica charantia]	[more]
XP_022155098.1	1.5e-42	61.14	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]

BLAST of Moc06g14930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g14930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZG4	1.4e-128	54.68	uncharacterized protein LOC111016201 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DZ90	6.2e-63	78.44	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1D7T3	3.2e-59	76.05	uncharacterized protein LOC111017812 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DB13	9.5e-48	90.43	uncharacterized protein LOC111018820 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DM29	7.1e-43	61.14	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]

BLAST of Moc06g14930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 394..414
None	No IPR available	COILS	Coil	Coil	coord: 308..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..451
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 46..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g14930.1	Moc06g14930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity