Moc06g14160 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g14160
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionORF43m
Locationchr6: 11038626 .. 11041779 (-)
RNA-Seq ExpressionMoc06g14160
SyntenyMoc06g14160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGAGGGTCGATACGAGGAGTCCTTTGGAGGGAAGACTATTGGGGCCTTGGGTATAAATGGTCAAGGGCCAATAGAGGGTGAAGTCATCGGGGCCTCGGGTATAAATGGTCGAGGGCTGATGTAGCAGGGTCGGGGCTCTGGGTATAAATGGTCAGGGGCCGACTCTACTCGAAGGAAAGATAACCGTGGAAGGTTAGGATAGCTGTGATGAACGTAGAGGTATTTGAGATGTTAGGGGGTCTAAAGGTTGCCTGTTAATATGTTTTCCCTAGTTGTGGTTGTCACTAAATGTTATGGAATGTGTTATGCTTGAATGCATAATGTGTTGCGAAGCATGACTATGAATGTTTCATGATATAGTTGAGCATGATGTGTGCATGTGTTGGCGAGGGCTACTTACGGAGTATGTTTTATATACTCACCCCCCCCCCCCCTCTAAATTGATTGTTTCAGGTCAAGGACTCGTGGGCGACCATGGTGATGGGACGAAGGAGACATGACGAGCGGGGACCATAGGCTACTTAGTCACTCTTGCTTAGTTTAGGTGATTGGTTAAGACCTTATGTTATGGTCAATAAACCTTTGTCGTATCTGAATAATTGGGAGGTTCCCCTTTTGTTGTTAGTTTCATTTCGAGGATGGGTGACTATCTTAGTTCTATTCCATTTATTGAGTTTTGCCAGTTTGATTAATAAACTTGTCTCATGGGGTGGTCCACGAATGGTCTTGAATGCTACTCTGGGAGATTGTTATATTGTTAATTTGATGAGAATTGGGACTTGATGTATATATACTTGTTTGCTTAAGGGGTTGGCATGCCGTATTTGGGGGTTAAGTTTAACTAGTTGGGTAGTTAACGTGACCTAGAAGCGTGTGGGAAATTCTGGGGCGTTACACAACTAATTGCACATAAAATTCAACTACTCCACTAGCCATAAGAATAGCAACCTACCTAGTTGACTTAACTATAACAAAAAATAAACCGAACAACTCCCTAGAAACTAGGACTTCGACTACACAAATTCAAAAACCAAAAAAATCAAACTTGCGATTTGAGTTAACTAAGTTAGTCAAGCTAACAGTAAAATTGACTCGAGGACCATTTAGAATCATTTCTCAAACCCTAGGGACTAAAGTGTCGCTTTTTGAACTTCATGACCAAATTGATACCTAACTCAAAACTCAGGGATTAAAAGTATATTTTACCCTATTTTTTATTATTTCTCTATCCAAAATTTCATCTTTATGTATTTTTATTGTTTTTATTCTAACAGATCACTCTCATTTCTCTCTTAAAATTAATATTTTCTCGAACTTTTCTCTCTTTACAAATTCGCTTTTTAAAATTTTCTTTCTCTTGTCAATCTATTTTTCCTCTAAAAATTATATTTTATTTTCTTGTTCAGTTTTTTTCACTATAATTTTTATTTATTTATTTTCTGTAAAAGGTATATTTTGAATATTGTTTTTATCTTTAAATTTTTTCTCGCTATAATTTTTCTCTTTCTTTTCATTACGTATCTTTTCCTCCCAACTTTATTTTTTTCCTCTAAAATTTTTCTCTTTTTTTCTTTAAATTGTCTTTCATTATTTTTTTTTGTTCTAAATTTGTTTTTTTATCCCTCTAAAATTTCTATTTAAAAAGTTTTTTTCTATCTCTCTAAACCTCTATTTTTGTGTCTCTACATTGGTCAAGTTCCACTCCAAAAATAGAAAATTGATGTCCCAAACATTATATTTTTTAAATAATTAATATATTTTATTAACATATTTACTAAATTGTGAATAAAATATTAAATATTTTTAAAAATTGATTATTAAATAACGATTCTAAAAATAATAAATATATATTTATCACACCTTTTTTTAATTGTACAAATAATTCAAATTAATTATAAAATGGTAATTTTCTCGCGAATATTCGCGTCCCCAAAAAAGGGTTCTTTAACCATGGAAGAAACTGGTGTTTTCACGACTCTACCACCCAGTCAATTCTGTTCCACTTAATCCCTATTTCATGGCCACATATTTTTCCGGCTAAGGAATGGGAAACCTTTCTCTTGTTACATGAATCCAATTTTCATTTCATCCGGGAAAAGCCATCTTTTTCTCAACAATGTCTTTGTCATTTGATCCAATAGCGTTCCGTTAGATAGGAACAGATTTGATAAATACTGATAACTCTCGGATGGAGTATTAGAACGGAAAAATCCATTAGATAATGAACTATTGGTTCTAAGCCATCTCTGGCGATGAATCAACAATCCGAAGTGCTTTTCTTGCGTATTCTTGATAAACCAGCGTTTATATATAGATGTAGGAAGATCTGTTTGGGAAGTAAGCAGCCCTAGTGGGAATCATCACTCTTAGATACATTATTTTTATAAGTAGAGTTACGAAAACTATAAAAAGCACTTTCTAGTTCACTTACAAAAGAAGGATCATTGTCAATCTCAAAAATTTGATTTTCAATATCCAAATATATGGAATAACAGCTGCTATTACTATCCCTAACTAAAAAAGTGTCATCAGATACGAAATTCCGAATGCCGACTAAATCATCAACAGTACTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAATTGTCCAGGCGGTAATGATAGTATCTTGTACCTGAACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGATGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG

mRNA sequence

ATGGTCGAGGGTCGATACGAGGAGTCCTTTGGAGGGAAGACTATTGGGGCCTTGGGTATAAATGGTCAAGGGCCAATAGAGGGTGAAGTCATCGGGGCCTCGGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGATGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG

Coding sequence (CDS)

ATGGTCGAGGGTCGATACGAGGAGTCCTTTGGAGGGAAGACTATTGGGGCCTTGGGTATAAATGGTCAAGGGCCAATAGAGGGTGAAGTCATCGGGGCCTCGGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGATGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG

Protein sequence

MVEGRYEESFGGKTIGALGINGQGPIEGEVIGASGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDDGQLVRSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
Homology
BLAST of Moc06g14160 vs. NCBI nr
Match: KAF4348549.1 (hypothetical protein F8388_000228 [Cannabis sativa])

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-55
Identity = 112/125 (89.60%), Postives = 114/125 (91.20%), Query Frame = 0

Query: 45  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDDGQLVRSSMDRTWTVVGVGGS 104
           KRIEEA DSFM APLGSGGYSSVGRAPLLQLGRCDYG        SSMDRTWTVVGVGGS
Sbjct: 154 KRIEEAFDSFMHAPLGSGGYSSVGRAPLLQLGRCDYG--------SSMDRTWTVVGVGGS 213

Query: 105 LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCL 164
           LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG L
Sbjct: 214 LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRL 270

Query: 165 RYPGV 170
           R+PG+
Sbjct: 274 RHPGL 270

BLAST of Moc06g14160 vs. NCBI nr
Match: OVA05688.1 (hypothetical protein BVC80_4285g1 [Macleaya cordata])

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43
Identity = 98/125 (78.40%), Postives = 100/125 (80.00%), Query Frame = 0

Query: 45  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDDGQLVRSSMDRTWTVVGVGGS 104
           KRIEEASDSFM APLGSGGYSSVGRAPLLQL                      VVGVGGS
Sbjct: 227 KRIEEASDSFMHAPLGSGGYSSVGRAPLLQL----------------------VVGVGGS 286

Query: 105 LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCL 164
            RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG L
Sbjct: 287 PRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRL 329

Query: 165 RYPGV 170
           R+PG+
Sbjct: 347 RHPGL 329

BLAST of Moc06g14160 vs. NCBI nr
Match: QHE65624.1 (ORF43m [Nitraria roborowskii] >QHE65704.1 ORF43m [Nitraria sibirica] >QHE65784.1 ORF43m [Nitraria tangutorum] >QHE65637.1 ORF43m [Nitraria roborowskii] >QHE65717.1 ORF43m [Nitraria sibirica])

HSP 1 Score: 171.8 bits (434), Expect = 5.2e-39
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 92  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 151
           MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL
Sbjct: 1   MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 60

Query: 152 HPVGTTRSPQGCLRYPGVADRP 174
           HPVGTTRSPQG LRYPGVADRP
Sbjct: 61  HPVGTTRSPQGRLRYPGVADRP 82

BLAST of Moc06g14160 vs. NCBI nr
Match: KAG9438705.1 (hypothetical protein H6P81_021364 [Aristolochia fimbriata])

HSP 1 Score: 171.0 bits (432), Expect = 8.9e-39
Identity = 96/146 (65.75%), Postives = 100/146 (68.49%), Query Frame = 0

Query: 59  LGSGGYSSVGRAPLLQLGRCDYG---------------------LDDGQLVRSS--MDRT 118
           L  GGYSSVGRAPLLQLGRCDYG                     L +G+  R+    D T
Sbjct: 74  LALGGYSSVGRAPLLQLGRCDYGLMSNCPGGNDSILYLNRWLTFLSNGEEDRNMPLKDST 133

Query: 119 WTV--------VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDR 174
            T         VGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEM QKEGK MDR
Sbjct: 134 ETKMGCQERRGVGVGGSPRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMWQKEGKPMDR 193

BLAST of Moc06g14160 vs. NCBI nr
Match: ERM97427.1 (hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda])

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-38
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 92  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 151
           MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL
Sbjct: 1   MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 60

Query: 152 HPVGTTRSPQGCLRYPGVADRP 174
           HPVGTTRSPQG LR+PGVADRP
Sbjct: 61  HPVGTTRSPQGRLRHPGVADRP 82

BLAST of Moc06g14160 vs. ExPASy TrEMBL
Match: A0A7J6DSE9 (Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.5e-55
Identity = 112/125 (89.60%), Postives = 114/125 (91.20%), Query Frame = 0

Query: 45  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDDGQLVRSSMDRTWTVVGVGGS 104
           KRIEEA DSFM APLGSGGYSSVGRAPLLQLGRCDYG        SSMDRTWTVVGVGGS
Sbjct: 154 KRIEEAFDSFMHAPLGSGGYSSVGRAPLLQLGRCDYG--------SSMDRTWTVVGVGGS 213

Query: 105 LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCL 164
           LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG L
Sbjct: 214 LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRL 270

Query: 165 RYPGV 170
           R+PG+
Sbjct: 274 RHPGL 270

BLAST of Moc06g14160 vs. ExPASy TrEMBL
Match: A0A200Q5G5 (Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.8e-44
Identity = 98/125 (78.40%), Postives = 100/125 (80.00%), Query Frame = 0

Query: 45  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDDGQLVRSSMDRTWTVVGVGGS 104
           KRIEEASDSFM APLGSGGYSSVGRAPLLQL                      VVGVGGS
Sbjct: 227 KRIEEASDSFMHAPLGSGGYSSVGRAPLLQL----------------------VVGVGGS 286

Query: 105 LRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCL 164
            RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG L
Sbjct: 287 PRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRL 329

Query: 165 RYPGV 170
           R+PG+
Sbjct: 347 RHPGL 329

BLAST of Moc06g14160 vs. ExPASy TrEMBL
Match: A0A6B9QFK3 (ORF43m OS=Nitraria tangutorum OX=357929 GN=trnA-UGC PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.5e-39
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 92  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 151
           MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL
Sbjct: 1   MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 60

Query: 152 HPVGTTRSPQGCLRYPGVADRP 174
           HPVGTTRSPQG LRYPGVADRP
Sbjct: 61  HPVGTTRSPQGRLRYPGVADRP 82

BLAST of Moc06g14160 vs. ExPASy TrEMBL
Match: A0A6B9QF48 (ORF43m OS=Nitraria roborowskii OX=357932 GN=trnA-UGC PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.5e-39
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 92  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 151
           MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL
Sbjct: 1   MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 60

Query: 152 HPVGTTRSPQGCLRYPGVADRP 174
           HPVGTTRSPQG LRYPGVADRP
Sbjct: 61  HPVGTTRSPQGRLRYPGVADRP 82

BLAST of Moc06g14160 vs. ExPASy TrEMBL
Match: A0A6B9QGL2 (ORF43m OS=Nitraria sibirica OX=357931 GN=trnA-UGC PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.5e-39
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 92  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 151
           MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL
Sbjct: 1   MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRL 60

Query: 152 HPVGTTRSPQGCLRYPGVADRP 174
           HPVGTTRSPQG LRYPGVADRP
Sbjct: 61  HPVGTTRSPQGRLRYPGVADRP 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF4348549.13.0e-5589.60hypothetical protein F8388_000228 [Cannabis sativa][more]
OVA05688.11.2e-4378.40hypothetical protein BVC80_4285g1 [Macleaya cordata][more]
QHE65624.15.2e-3998.78ORF43m [Nitraria roborowskii] >QHE65704.1 ORF43m [Nitraria sibirica] >QHE65784.1... [more]
KAG9438705.18.9e-3965.75hypothetical protein H6P81_021364 [Aristolochia fimbriata][more]
ERM97427.12.0e-3897.56hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7J6DSE91.5e-5589.60Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV... [more]
A0A200Q5G55.8e-4478.40Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 ... [more]
A0A6B9QFK32.5e-3998.78ORF43m OS=Nitraria tangutorum OX=357929 GN=trnA-UGC PE=4 SV=1[more]
A0A6B9QF482.5e-3998.78ORF43m OS=Nitraria roborowskii OX=357932 GN=trnA-UGC PE=4 SV=1[more]
A0A6B9QGL22.5e-3998.78ORF43m OS=Nitraria sibirica OX=357931 GN=trnA-UGC PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g14160.1Moc06g14160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006101 citrate metabolic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0004108 citrate (Si)-synthase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0032549 ribonucleoside binding