Moc06g12500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g12500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein FAR-RED ELONGATED HYPOCOTYL 3-like
Location	chr6: 9595686 .. 9598036 (-)
RNA-Seq Expression	Moc06g12500
Synteny	Moc06g12500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGGCTAGATGTTGATGAAACGATAACATATGTCAACCTAGTAAGTGTCTTGCACATGCTTACTAGAATTGATCCTGACCAATTTGATCTTATATATTGTACAATATGTATATTGATTTGATTTTCGGTACGAAGTCCTGAACTATCTGATATTTGATGACAGCAGTTTGAGATTTTATTTGAATGACCTTCTCGATCCGTCACAAGTACCCTTGTACGTAACCGTCGTACCTAAAACATCATATGGTAGTGGGAGCAGGAGAGGAAATAATTTTTTCGAAACCCATACATCGTCTTCATTCCAATACTACCCAGGACAGAATGATCCATGTTTCAGCCGTTGTATTTCTATTGACTCTCCTCTGGATGATGTCGGTTCCTCTCATTTGTCCCACAGATTACACCATTGGCCGATAACGTTGTCCCATGTAACCTAGGCGACGACGAATGTCCATATTATGGTCAACTGTACGAGAATGAGGTTGAGTACAAATTTCAACGGGATGATGAGTATGATTATGACGAATATTGTACAGAGGATGGGGTTGAGGACGATGGTGGGAATGGATATGATAATGGGGAGGAGGATGAATATCATACCGAGGATGTGCTTGACGACCATTATGAGGATGAAGGTCAACATGTTCACGAGTCTCATACAGTGAGTGGGAATGTACCTTATCAAACAGTTGAAGAAGTTGTTTCACGTCTGATGCAGAATATCATAACTGGCAATGGGTCCGACTTCGTAGGTGAAATTGTTGTTAAGGGTATTTTCCGTTCGAAGGAAGAACTACACTTCAAGCTGTCTGTGTTAGCTATAAAGCTGAATTTTGAATTTAAGGTTAAAAAATCGACGAAGACATTGTATACCGTTGGGTGTACCGAACAAGGTTGCAAATGAGGTTTGCGTGCAAAGATTATCCGAGGTGGTGACTCATTCATCATTTCGAAGTTTAATGATGTTCACAAGTGCAAATGTGAAGTACTGAACCATGACCATAGGCAAGCTCGGAGTTGGGTGGTTGGTCAGTTATTGAAGTCCAATTTGGAGGATGTCAGCCGTTAGTACAGACCTAAGGACATTATTAACGACATGCGAAAGAATTATGGGGTGAACATTAGATATGAAAAGGCATGGCAGGCTGTTAACGCAGGCACTGTTTTTGAAGTGGAGCTGGAGGAAGATAAGTTTTTTAAGTACACGTTCATGGCCCTCGGTTGCTGTATTAGAGGGTTTTCCAGTTGTATCCGCCCAGTGCTGGTGATAGATGGTGCACATCTCAAGGGTAAATATAAAGGTGTTATTCTTATTACTTCTTCTGTTGATGGCAACAATCAAATATATCCTCTTGCCTTTGGAATTGTCGATCAAGAGAGTGATCAATCCTAGACTTGGTTTCTGAACATGGTCAAGACATGTATTGGAGAGGTCGATGGGTTATTATACGTATCTGATCGACATGTGTGCATTACGAAATCTGCTAGGCAGGTCTTTCCACAAGCTGCTCATGGAATATACATGCAGCACTTGTCTACTAACCTGAAGGACAAGTTCAAGGATGATGTCATGCAAGAAATGTTCATATTAGCGGCAAAGGCCTGTCGAAAATTAGAGTTCATATACTATTTCTCCCAACTAGCAGGATTTCCAGAGGTCCAGCGATACTTGGAAGGAATTGGTTTTGAAAAATGGACTCGTGCATTTCAACCGGGTTTGAGGTATGACCAGATGACATCAAATATTGTGGAGTCGATGAATTAAGTCCTTGTCCATGCACGTTATTTGCCAGTCACTGCACTTTTGGAACATGCTTGTGCACTCTTACAGCGCTAGTTTTACGAAAGCGAACCTACGCATCCAGTCGCGAAACTATTCTCACTGACTATGGTGAGAATAAGATGCGGACTGTAGAGAACCTATCTCGTACTCATTCCACCATACCCATTGACCATCACGAGTTGGAACTTAGCAATGGACTAAAAAGGGTGCGTGTGAATTTAAATGCAATGATCTATGGATGTAAAGAGTTTGACTACTTTCAGCTTCCTTGCTCCCACGCTATTGCAGCGACCACCTATCGGAACGTGAACAGGTACACACTATGCTCACCTACATATACTCTTCAAACTCTCATTAACGCATATGCCGAACCTGTGTACCCTCTTCGCGATGAGGATGATTGGATATTACCTGATGACTTCGTCGACCGTAAAGTGGAGTCGCCCAGATATGTTCCGCGTATTGGCCGACATCAAACTATACGAATTCCATCTGCTGGGGAGACCCGCCAAGTCCACAAATGCGGTCGATGTGGCAACATGGGTCATAATAGAAAAACATGA

mRNA sequence

ATGGGTGGGCTAGATGTTGATGAAACGATAACATATGTCAACCTAATTACACCATTGGCCGATAACGTTGTCCCATGTAACCTAGGCGACGACGAATGTCCATATTATGGTCAACTGTACGAGAATGAGGTTGAGTACAAATTTCAACGGGATGATGAGTATGATTATGACGAATATTGTACAGAGGATGGGGTTGAGGACGATGGTGGGAATGGATATGATAATGGGGAGGAGGATGAATATCATACCGAGGATGTGCTTGACGACCATTATGAGGATGAAGGTCAACATGTTCACGAGTCTCATACAGTGAGTGGGAATGTACCTTATCAAACAGTTGAAGAAGTTGTTTCACGTCTGATGCAGAATATCATAACTGGCAATGGGTCCGACTTCGTAGGTGAAATTGTTGTTAAGGGTATTTTCCGTTCGAAGGAAGAACTACACTTCAAGCTGTCTGTGTTAGCTATAAAGCTGAATTTTGAATTTAAGGACAAGTTCAAGGATGATGTCATGCAAGAAATGTTCATATTAGCGGCAAAGGCCTGTCGAAAATTAGAGTTCATATACTATTTCTCCCAACTAGCAGGATTTCCAGAGGTCCAGCGATACTTGGAAGGAATTGGTTTTGAAAAATGGACTCGTGCATTTCAACCGGCGCTAGTTTTACGAAAGCGAACCTACGCATCCAGTCGCGAAACTATTCTCACTGACTATGGTGAGAATAAGATGCGGACTGTAGAGAACCTATCTCGTACTCATTCCACCATACCCATTGACCATCACGAGTTGGAACTTAGCAATGGACTAAAAAGGGTGCGTGTGAATTTAAATGCAATGATCTATGGATGTAAAGAGTTTGACTACTTTCAGCTTCCTTGCTCCCACGCTATTGCAGCGACCACCTATCGGAACGTGAACAGGTACACACTATGCTCACCTACATATACTCTTCAAACTCTCATTAACGCATATGCCGAACCTGTGTACCCTCTTCGCGATGAGGATGATTGGATATTACCTGATGACTTCGTCGACCGTAAAGTGGAGTCGCCCAGATATGTTCCGCGTATTGGCCGACATCAAACTATACGAATTCCATCTGCTGGGGAGACCCGCCAAGTCCACAAATGCGGTCGATGTGGCAACATGGGTCATAATAGAAAAACATGA

Coding sequence (CDS)

ATGGGTGGGCTAGATGTTGATGAAACGATAACATATGTCAACCTAATTACACCATTGGCCGATAACGTTGTCCCATGTAACCTAGGCGACGACGAATGTCCATATTATGGTCAACTGTACGAGAATGAGGTTGAGTACAAATTTCAACGGGATGATGAGTATGATTATGACGAATATTGTACAGAGGATGGGGTTGAGGACGATGGTGGGAATGGATATGATAATGGGGAGGAGGATGAATATCATACCGAGGATGTGCTTGACGACCATTATGAGGATGAAGGTCAACATGTTCACGAGTCTCATACAGTGAGTGGGAATGTACCTTATCAAACAGTTGAAGAAGTTGTTTCACGTCTGATGCAGAATATCATAACTGGCAATGGGTCCGACTTCGTAGGTGAAATTGTTGTTAAGGGTATTTTCCGTTCGAAGGAAGAACTACACTTCAAGCTGTCTGTGTTAGCTATAAAGCTGAATTTTGAATTTAAGGACAAGTTCAAGGATGATGTCATGCAAGAAATGTTCATATTAGCGGCAAAGGCCTGTCGAAAATTAGAGTTCATATACTATTTCTCCCAACTAGCAGGATTTCCAGAGGTCCAGCGATACTTGGAAGGAATTGGTTTTGAAAAATGGACTCGTGCATTTCAACCGGCGCTAGTTTTACGAAAGCGAACCTACGCATCCAGTCGCGAAACTATTCTCACTGACTATGGTGAGAATAAGATGCGGACTGTAGAGAACCTATCTCGTACTCATTCCACCATACCCATTGACCATCACGAGTTGGAACTTAGCAATGGACTAAAAAGGGTGCGTGTGAATTTAAATGCAATGATCTATGGATGTAAAGAGTTTGACTACTTTCAGCTTCCTTGCTCCCACGCTATTGCAGCGACCACCTATCGGAACGTGAACAGGTACACACTATGCTCACCTACATATACTCTTCAAACTCTCATTAACGCATATGCCGAACCTGTGTACCCTCTTCGCGATGAGGATGATTGGATATTACCTGATGACTTCGTCGACCGTAAAGTGGAGTCGCCCAGATATGTTCCGCGTATTGGCCGACATCAAACTATACGAATTCCATCTGCTGGGGAGACCCGCCAAGTCCACAAATGCGGTCGATGTGGCAACATGGGTCATAATAGAAAAACATGA

Protein sequence

MGGLDVDETITYVNLITPLADNVVPCNLGDDECPYYGQLYENEVEYKFQRDDEYDYDEYCTEDGVEDDGGNGYDNGEEDEYHTEDVLDDHYEDEGQHVHESHTVSGNVPYQTVEEVVSRLMQNIITGNGSDFVGEIVVKGIFRSKEELHFKLSVLAIKLNFEFKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQPALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHELELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLINAYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGNMGHNRKT

Homology

[Close]

BLAST of Moc06g12500 vs. NCBI nr
Match: XP_022148915.1 (uncharacterized protein LOC111017466 [Momordica charantia])

HSP 1 Score: 462.6 bits (1189), Expect = 3.3e-126
Identity = 228/247 (92.31%), Postives = 229/247 (92.71%), Query Frame = 0


Query: 159 LNFEFKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ 218
           L+   KDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ
Sbjct: 42  LSTNLKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ 101

Query: 219 P---------------ALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHE 278
           P               ALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHE
Sbjct: 102 PGLSHCTFGTCLCTLTALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHE 161

Query: 279 LELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLIN 338
           LELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLIN
Sbjct: 162 LELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLIN 221

Query: 339 AYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGN 391
           AYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGN
Sbjct: 222 AYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGN 281

[Close]

BLAST of Moc06g12500 vs. NCBI nr
Match: XP_022155392.1 (uncharacterized protein LOC111022536 [Momordica charantia])

HSP 1 Score: 387.9 bits (995), Expect = 1.0e-103
Identity = 194/266 (72.93%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 164 KDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQPAL-- 223
           KDKFKDD MQEMFILAAKACRK EF YYFSQLAGFP+VQRYLEGIGFEKWTRAFQP L  
Sbjct: 124 KDKFKDDAMQEMFILAAKACRKSEFRYYFSQLAGFPKVQRYLEGIGFEKWTRAFQPGLRY 183

Query: 224 -------------------------------------VLRKRTYASSRETILTDYGENKM 283
                                                   +RTYAS+RETILTDYGENKM
Sbjct: 184 DQMTSNIVESMNAVLVHARSLLVTTLLEHAHVLLQRWFYERRTYASNRETILTDYGENKM 243

Query: 284 RTVENLSRTHSTIPIDHHELELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYR 343
           RT ENLSRTHS  PIDHHELE+SNGLKRVRVNLNA   GCKEFDYFQLPCSHAIAA TYR
Sbjct: 244 RTAENLSRTHSITPIDHHELEVSNGLKRVRVNLNARTCGCKEFDYFQLPCSHAIAAATYR 303

Query: 344 NVNRYTLCSPTYTLQTLINAYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTI 391
           NVNRYTLCSP YTLQTLINAY EP YP  DE+DWILPDDFVDR VE PR VPR+GR QT+
Sbjct: 304 NVNRYTLCSPAYTLQTLINAYXEPXYPXGDEEDWILPDDFVDRXVEPPRXVPRVGRXQTV 363

[Close]

BLAST of Moc06g12500 vs. NCBI nr
Match: XP_022153251.1 (uncharacterized protein LOC111020787 [Momordica charantia])

HSP 1 Score: 383.3 bits (983), Expect = 2.6e-102
Identity = 194/271 (71.59%), Postives = 204/271 (75.28%), Query Frame = 0


Query: 159 LNFEFKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ 218
           L+   KD+FKDD MQEMFILAAKAC+K EF YYFSQLAGF EVQRYLE IGFEKWTRAFQ
Sbjct: 188 LSTNLKDEFKDDAMQEMFILAAKACQKSEFRYYFSQLAGFLEVQRYLERIGFEKWTRAFQ 247

Query: 219 PAL---------------------------------------VLRKRTYASSRETILTDY 278
           P L                                          +RTY SSRETILTDY
Sbjct: 248 PGLRYDQMTSNIAESMNAVLVHARSLPVTALLEHARALLQRWFYERRTYVSSRETILTDY 307

Query: 279 GENKMRTVENLSRTHSTIPIDHHELELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIA 338
           GENKMRT ENLSRTHS  PIDHHELE+ +GLKRVRVNLNA   GCKEFDYFQLPCSHAIA
Sbjct: 308 GENKMRTAENLSRTHSITPIDHHELEVIDGLKRVRVNLNARTCGCKEFDYFQLPCSHAIA 367

Query: 339 ATTYRNVNRYTLCSPTYTLQTLINAYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIG 391
             TYR VNRYTLCSP YTLQTLINAYA+ VYPL DE+DWILPDDFVDR VE+PRYVPRIG
Sbjct: 368 VATYRKVNRYTLCSPAYTLQTLINAYAKHVYPLGDEEDWILPDDFVDRIVETPRYVPRIG 427

[Close]

BLAST of Moc06g12500 vs. NCBI nr
Match: XP_022154930.1 (uncharacterized protein LOC111022077 [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-86
Identity = 244/673 (36.26%), Postives = 286/673 (42.50%), Query Frame = 0


Query: 23  VVPCNLGDDECPYYGQLYENEVEYKFQRDDEYDYDEYCTEDGVED---------DGGNGY 82
           +VPCNL DD+ PYY +LYENEVEY   R++EYD  E     GVED         +G +G+
Sbjct: 1   MVPCNLSDDDPPYYDELYENEVEYDI-RNEEYDLHEDDVMHGVEDEDDQAESEFEGEHGH 60

Query: 83  DNGEEDEYHTE-DVLDDHYEDEGQHVHESHTVSGNVPYQTVEEVVSRLMQNIITGNGSDF 142
           DNG +DE + + D   D   +EG+ V E  +VS N    TV+E+     QNI + +  D 
Sbjct: 61  DNGNDDEINDQPDNGSDQPGNEGEPVFEVQSVSANACTHTVQELPRCSTQNITSTDAKDC 120

Query: 143 VGEIVVKGIFRSKEELHFKLSVLAIKLNFEF----------------------------- 202
           VG+IVV GIFRSK+EL FKL VLA+KLNFEF                             
Sbjct: 121 VGDIVVGGIFRSKDELRFKLLVLAMKLNFEFRVKKSTKTLYIVGCIEVGCKWGLHANRIR 180

Query: 203 ------------------------------------------------------------ 262
                                                                       
Sbjct: 181 GADSFTISKYTDVHNCTQEVLNHDHRQARSWVVGQLLKANLEDVSRLYRPKDIMTDMRKQ 240

Query: 263 ------------------------------------------------------------ 322
                                                                       
Sbjct: 241 YGVNIRYEKAWRAKEVALNILVGSPKESYNCLRRYEEALKVVNTGTIFEMELEEDKYFKY 300

Query: 323 ------------------------------------------------------------ 382
                                                                       
Sbjct: 301 AFMALGCCIRGFSSCIRPVLVIDGAHLKGKYKGVILTASSVDGNNQIYPIAFGIVDIESB 360

Query: 383 ------------------------------------------------------KDKFKD 384
                                                                 KDKFK+
Sbjct: 361 ASWSWFLERLKHCIGEVDGLLFVSDRHVSITKSVREVFPEAAHGICMHHLSMNLKDKFKN 420

[Close]

BLAST of Moc06g12500 vs. NCBI nr
Match: XP_022156830.1 (uncharacterized protein LOC111023664 [Momordica charantia])

HSP 1 Score: 296.2 bits (757), Expect = 4.1e-76
Identity = 142/176 (80.68%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 215 RAFQPALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHELELSNGLKRVR 274
           RA        +RTYASSRETILT+YGENKMRT ENLSRTHS  PIDHH+LE+S+GLKRVR
Sbjct: 29  RALLQRWFYERRTYASSRETILTNYGENKMRTTENLSRTHSITPIDHHKLEVSDGLKRVR 88

Query: 275 VNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLINAYAEPVYPLRD 334
           VNLNA    CKEFDYFQ PCSHAIAATTY NVNRYTLCSP YT+QTLIN Y EPVYPL D
Sbjct: 89  VNLNARTCECKEFDYFQFPCSHAIAATTYWNVNRYTLCSPAYTIQTLINTYVEPVYPLGD 148

Query: 335 EDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGNMGHNRKT 391
           +DDWILPDDFVDR VE PRYV R+GR QTIRIPSAGETRQVHKCG CGNMGHNRKT
Sbjct: 149 KDDWILPDDFVDRIVEPPRYVSRVGRRQTIRIPSAGETRQVHKCGWCGNMGHNRKT 204

[Close]

BLAST of Moc06g12500 vs. ExPASy TrEMBL
Match: A0A6J1D499 (uncharacterized protein LOC111017466 OS=Momordica charantia OX=3673 GN=LOC111017466 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.6e-126
Identity = 228/247 (92.31%), Postives = 229/247 (92.71%), Query Frame = 0


Query: 159 LNFEFKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ 218
           L+   KDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ
Sbjct: 42  LSTNLKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ 101

Query: 219 P---------------ALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHE 278
           P               ALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHE
Sbjct: 102 PGLSHCTFGTCLCTLTALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHE 161

Query: 279 LELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLIN 338
           LELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLIN
Sbjct: 162 LELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLIN 221

Query: 339 AYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGN 391
           AYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGN
Sbjct: 222 AYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGN 281

[Close]

BLAST of Moc06g12500 vs. ExPASy TrEMBL
Match: A0A6J1DP73 (uncharacterized protein LOC111022536 OS=Momordica charantia OX=3673 GN=LOC111022536 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 5.1e-104
Identity = 194/266 (72.93%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 164 KDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQPAL-- 223
           KDKFKDD MQEMFILAAKACRK EF YYFSQLAGFP+VQRYLEGIGFEKWTRAFQP L  
Sbjct: 124 KDKFKDDAMQEMFILAAKACRKSEFRYYFSQLAGFPKVQRYLEGIGFEKWTRAFQPGLRY 183

Query: 224 -------------------------------------VLRKRTYASSRETILTDYGENKM 283
                                                   +RTYAS+RETILTDYGENKM
Sbjct: 184 DQMTSNIVESMNAVLVHARSLLVTTLLEHAHVLLQRWFYERRTYASNRETILTDYGENKM 243

Query: 284 RTVENLSRTHSTIPIDHHELELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIAATTYR 343
           RT ENLSRTHS  PIDHHELE+SNGLKRVRVNLNA   GCKEFDYFQLPCSHAIAA TYR
Sbjct: 244 RTAENLSRTHSITPIDHHELEVSNGLKRVRVNLNARTCGCKEFDYFQLPCSHAIAAATYR 303

Query: 344 NVNRYTLCSPTYTLQTLINAYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIGRHQTI 391
           NVNRYTLCSP YTLQTLINAY EP YP  DE+DWILPDDFVDR VE PR VPR+GR QT+
Sbjct: 304 NVNRYTLCSPAYTLQTLINAYXEPXYPXGDEEDWILPDDFVDRXVEPPRXVPRVGRXQTV 363

[Close]

BLAST of Moc06g12500 vs. ExPASy TrEMBL
Match: A0A6J1DK28 (uncharacterized protein LOC111020787 OS=Momordica charantia OX=3673 GN=LOC111020787 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.2e-102
Identity = 194/271 (71.59%), Postives = 204/271 (75.28%), Query Frame = 0


Query: 159 LNFEFKDKFKDDVMQEMFILAAKACRKLEFIYYFSQLAGFPEVQRYLEGIGFEKWTRAFQ 218
           L+   KD+FKDD MQEMFILAAKAC+K EF YYFSQLAGF EVQRYLE IGFEKWTRAFQ
Sbjct: 188 LSTNLKDEFKDDAMQEMFILAAKACQKSEFRYYFSQLAGFLEVQRYLERIGFEKWTRAFQ 247

Query: 219 PAL---------------------------------------VLRKRTYASSRETILTDY 278
           P L                                          +RTY SSRETILTDY
Sbjct: 248 PGLRYDQMTSNIAESMNAVLVHARSLPVTALLEHARALLQRWFYERRTYVSSRETILTDY 307

Query: 279 GENKMRTVENLSRTHSTIPIDHHELELSNGLKRVRVNLNAMIYGCKEFDYFQLPCSHAIA 338
           GENKMRT ENLSRTHS  PIDHHELE+ +GLKRVRVNLNA   GCKEFDYFQLPCSHAIA
Sbjct: 308 GENKMRTAENLSRTHSITPIDHHELEVIDGLKRVRVNLNARTCGCKEFDYFQLPCSHAIA 367

Query: 339 ATTYRNVNRYTLCSPTYTLQTLINAYAEPVYPLRDEDDWILPDDFVDRKVESPRYVPRIG 391
             TYR VNRYTLCSP YTLQTLINAYA+ VYPL DE+DWILPDDFVDR VE+PRYVPRIG
Sbjct: 368 VATYRKVNRYTLCSPAYTLQTLINAYAKHVYPLGDEEDWILPDDFVDRIVETPRYVPRIG 427

[Close]

BLAST of Moc06g12500 vs. ExPASy TrEMBL
Match: A0A6J1DL12 (uncharacterized protein LOC111022077 OS=Momordica charantia OX=3673 GN=LOC111022077 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 9.6e-87
Identity = 244/673 (36.26%), Postives = 286/673 (42.50%), Query Frame = 0


Query: 23  VVPCNLGDDECPYYGQLYENEVEYKFQRDDEYDYDEYCTEDGVED---------DGGNGY 82
           +VPCNL DD+ PYY +LYENEVEY   R++EYD  E     GVED         +G +G+
Sbjct: 1   MVPCNLSDDDPPYYDELYENEVEYDI-RNEEYDLHEDDVMHGVEDEDDQAESEFEGEHGH 60

Query: 83  DNGEEDEYHTE-DVLDDHYEDEGQHVHESHTVSGNVPYQTVEEVVSRLMQNIITGNGSDF 142
           DNG +DE + + D   D   +EG+ V E  +VS N    TV+E+     QNI + +  D 
Sbjct: 61  DNGNDDEINDQPDNGSDQPGNEGEPVFEVQSVSANACTHTVQELPRCSTQNITSTDAKDC 120

Query: 143 VGEIVVKGIFRSKEELHFKLSVLAIKLNFEF----------------------------- 202
           VG+IVV GIFRSK+EL FKL VLA+KLNFEF                             
Sbjct: 121 VGDIVVGGIFRSKDELRFKLLVLAMKLNFEFRVKKSTKTLYIVGCIEVGCKWGLHANRIR 180

Query: 203 ------------------------------------------------------------ 262
                                                                       
Sbjct: 181 GADSFTISKYTDVHNCTQEVLNHDHRQARSWVVGQLLKANLEDVSRLYRPKDIMTDMRKQ 240

Query: 263 ------------------------------------------------------------ 322
                                                                       
Sbjct: 241 YGVNIRYEKAWRAKEVALNILVGSPKESYNCLRRYEEALKVVNTGTIFEMELEEDKYFKY 300

Query: 323 ------------------------------------------------------------ 382
                                                                       
Sbjct: 301 AFMALGCCIRGFSSCIRPVLVIDGAHLKGKYKGVILTASSVDGNNQIYPIAFGIVDIESD 360

Query: 383 ------------------------------------------------------KDKFKD 384
                                                                 KDKFK+
Sbjct: 361 ASWSWFLERLKHCIGEVDGLLFVSDRHVSITKSVREVFPEAAHGICMHHLSMNLKDKFKN 420

[Close]

BLAST of Moc06g12500 vs. ExPASy TrEMBL
Match: A0A6J1DRF6 (uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023664 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-76
Identity = 142/176 (80.68%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 215 RAFQPALVLRKRTYASSRETILTDYGENKMRTVENLSRTHSTIPIDHHELELSNGLKRVR 274
           RA        +RTYASSRETILT+YGENKMRT ENLSRTHS  PIDHH+LE+S+GLKRVR
Sbjct: 29  RALLQRWFYERRTYASSRETILTNYGENKMRTTENLSRTHSITPIDHHKLEVSDGLKRVR 88

Query: 275 VNLNAMIYGCKEFDYFQLPCSHAIAATTYRNVNRYTLCSPTYTLQTLINAYAEPVYPLRD 334
           VNLNA    CKEFDYFQ PCSHAIAATTY NVNRYTLCSP YT+QTLIN Y EPVYPL D
Sbjct: 89  VNLNARTCECKEFDYFQFPCSHAIAATTYWNVNRYTLCSPAYTIQTLINTYVEPVYPLGD 148

Query: 335 EDDWILPDDFVDRKVESPRYVPRIGRHQTIRIPSAGETRQVHKCGRCGNMGHNRKT 391
           +DDWILPDDFVDR VE PRYV R+GR QTIRIPSAGETRQVHKCG CGNMGHNRKT
Sbjct: 149 KDDWILPDDFVDRIVEPPRYVSRVGRRQTIRIPSAGETRQVHKCGWCGNMGHNRKT 204

The following BLAST results are available for this feature:

BLAST of Moc06g12500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148915.1	3.3e-126	92.31	uncharacterized protein LOC111017466 [Momordica charantia]	[more]
XP_022155392.1	1.0e-103	72.93	uncharacterized protein LOC111022536 [Momordica charantia]	[more]
XP_022153251.1	2.6e-102	71.59	uncharacterized protein LOC111020787 [Momordica charantia]	[more]
XP_022154930.1	2.0e-86	36.26	uncharacterized protein LOC111022077 [Momordica charantia]	[more]
XP_022156830.1	4.1e-76	80.68	uncharacterized protein LOC111023664 [Momordica charantia]	[more]

BLAST of Moc06g12500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g12500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D499	1.6e-126	92.31	uncharacterized protein LOC111017466 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DP73	5.1e-104	72.93	uncharacterized protein LOC111022536 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DK28	1.2e-102	71.59	uncharacterized protein LOC111020787 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DL12	9.6e-87	36.26	uncharacterized protein LOC111022077 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DRF6	2.0e-76	80.68	uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc06g12500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 283..307 e-value: 0.0072 score: 21.2
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 284..304 e-value: 5.1E-4 score: 19.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g12500.1	Moc06g12500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding