Moc06g12120 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g12120
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNase H domain-containing protein
Location	chr6: 9269927 .. 9273582 (+)
RNA-Seq Expression	Moc06g12120
Synteny	Moc06g12120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTTCCAGTGCGAAGAACCAGGGATCTTGACACAGCGCTTTCGCTTTAAATCAATCTCGCTCATCTGGTCTGCCCGCCCCCTGAGCTCGAAAACCTGGTGGAGGACGAATAGAAACGCCGGTGTCTCTTGTGTGCCTCATTTATGCTGGTGGCATACCGTACCGTATTGTGCTGAACCCAATATGAGATAAGTTGGCTATAGTCCGAACAGAGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGGCTGTTATTTTCGTTGAAGAAGGAGGATGTAAATATGGCCACAACCACTTGCCACACACATAGTAGGAGAGCAATACGTCAGGTGTTCTTTTATTTGAGTTACGCATTAAACGATCATGTACACGTATCTTATTCATGATTGTTTTAAGGGATTAGCACTATCCCCATTGTAGCGACCTGACTACAATACCGACGACACAGGTGAAACCTTTGAGAGTTGTTTGTGATCAACACTCGACATAATACATGCCTTGATTTCATTAAGAGTTAGACATCACAATTATGAGCACTACCACCTTAGGAAAGAGATTCGAAGTAATCCTCCATTATTATAATTAGTGCTCCCATAGTCAAACTTTCAACTATGTTATTACCCATTGAACCTATTTCTTGGAATCTCCAATCTTGAGGTCGGGTGTCCATTGCGGTGACTATCTTTATAGGTCTTCCTTTCCTCTTGGTGATTTCATCTCTCAATGATTCCAACACGTACATTCATCTCTGAGATGATTTCGATAATTATTCTGATGCGCCAATCTATTGTTCTTTGCATATATGCTATGAGGAACAACTCAATCAACACTCATTAATAGAAAAAAAATATTTTCTTACGTTGCAATATTGGCTTTTAAAAAAATTCTCTCCCACATTTTGAGATATTTTGTATAACATATATACTTTCATCTCTCAACATTTTTCACGACCATAAGTCATGAACACTACAACAATTTGATATGTCATAATCAAAATTGTTAGATATGAGGAAAATCAAAACATCACAAAATACAAATTAATTATTCCAGCAATAATTAATTTAATTTCACATAATTATATTATATTTTTTTAGAGCTCCACAATTATATTATAGATTCCACCAAGAAAATATTTTCTGATAGTTTTCTATATAACATCACATCATTAATTACACTCGATAACACATGAGTATTTAACCAATCATAAATTTACAATTTCTACCTCCAATAATATGTATTAATTTTCAAATACATGTTAACACATAAATTGTACAAGATAGACATGCTGAATAAAATAATTTTATTTCTTTATGTAAGATAAAACTATATATGTAAATATAGTTTAACAAGATCTCAAACCACCGTGAAAATATATATGCAAATATAGCCATCAAGATTTTAAACCATCTTAAAAATCAATATGATTACTAACTTTATTAACATTGCAATATAATTACCACATTAGCGTGTAAGACTTTTCTACCCTTCTTACACCAGCAAAAAAGGAAATTATACGCCAATTTAATATAATTCTCAAGTTAATAAAAATTCATGGCTAAATAAAATTCTCAATAACAACCTAATTTAAGGTATGAGATCATAACTTACATTTTTAATTTAAGCGGCATCACCAAAACATATAAGAATTGGAAGAAGTTTTGGAGATCAAAGGCCCTTCCTAAAGCCAAAATTTGTTGCTGGATCGGAAGATTTTCAACAACATCACCTCCACTAAAACAAATCTTTTGATTAAAGGAATAGTAACTGACCCTTGGTGTGTTTTTTGGAGGACGAAAGAGGAGACAAACTGCCATATATTTTGGAATTGTCAGGTAACAGAAGACATCTGGGCTAAATACTTTAAGTCTAACTTAGATTTATGGTGTGTTGACAGGAGCAACTGGAGCGTACAAGACTACTGGAGTTGGCTGGTAGAGCATTCTACAGAAGGAGATATGACAAATATTTTGACAATCATGTGGCAAATTTGGGAATGCAGGAATAGGGTGGTGTTCTGTGGTGAAAAGCCTTCTTTCGAGGGTATTTGCAATTTAGCAATTATGAAGCAGAAAGAGAAATGTGCACAACCAACACACAAACATCAGTCCGAGGTGATAAATTGGATCCCCCCTCCGTTACATACCTGGAAGCTCAACTCTGATGCAGCCTAGAATGATGGTCTCGGAACAGGCGGAATCGGATGGGTGATTCGAGATTGGGATGGTCACATTGGGTGTGCAGGTTGTCTTTTTACAGCTATCAAACAAGAGATCAAATTTCTGGAAACAATGGCTATTTGTGAAGGTTTTAAAGGTTTGAAAGAAGGAGGTTTTTACTCGAGTATAGCTGAATCGGACTCCCTCGAGGTGGTTCGTTTGCTGAATGGAGATGCTGAAGACCTCATTGAGATTCGATGGTTGATCAACGAGGTGAAATTTCGTGCTTTATACGCCGGTGTAATTTCGATTCACCATATTGCGAGAGTTGGGAACGATTTGGCTCATGAAATTGCACGTTGGGCAATGGTTACAGAGAGATCGCTAGTGTGGGAGGCGTGTTCCCTGCAAGTTTGTTGCTTTAGTTCTTTTATGGGGTCTTATTCAAAAAAAAAAAAAAAATGTAATTATCACACGTGAGCGTTGCGTACAAATAGGGAAAATTATTTCTAACATGCTAAATGAAATGGCCATAGGCGAAATCACTAACATTTTAGCATGCTATCTCACACAAAAAACACAATAATTATGATACTCAAAATATGAATCGATTTGAATTAAAAATCGATAAGTCCTCGTAAGTCACATAAATTTTAAAACTCTTTATGTCCTAACTATTAACCGGATAAAAAACTTAACAATTTTCAGCTGAATGATAATGAAGTAGTATATAGAGTTTGTGGTTTGTTGCACGATCCAAGAGTATTTCTACCACAAGTCTCATGAATGATAATTAAAAGTACATTAAATTCAATTCCATCTAACAAAAGAGAGGTAATATGTAATATATATGGGCTCCAAACGAGTGAATAATTATACTTCACTGGTAGAGTACAGAAAGATCAAGATAAGAAATCCGTCCAAATTACATGGGGGAGAATTAACAGATTTCTCCTGGATTAAACTCCCAACTATCTTTAACATAAATTTACCAAATTAAAAGATTTTTGAGATGATATCTTCGGAGGGTTATTTTTAAATCTTAATTTCATAAATGTCTTTAGTTTTTAAGATTTTCACTTTTAATGTTTGGATTTTTTATTAATGACCATTCTTTGCTTTTTATTTTATTATAATTTTTAAATTTAAAAGATTTGAATCGTTAATTTGTAATTATATTCCTTTAATTAGCGTGGACCCCATTCAATTTTTCAACACTAATCCCTCAAATGTCTCTTTCAAAAAAGATTTTGTTAAATCAAAGTTTTAAATATTTTTTAATCCGTCTGCTGCCATCTCCGTGCGTTGTTTCCAGTAGTCGGCTGCCCTCTCGCCAACCACCGTGTTTATTCCCCGTCGTCGTCGTTTCAGACCTTCAGGGCTTCCGTCAACGAGGTATTGATTCCTTCTTCCCCAGAGACGTCCAGACCTTCAATTTCCGTCGTCAAATAAAGTTTCCGTCGACGTCTTTGCAGGTTTCCGACGCCGTGTAG

mRNA sequence

ATGATCTTCCAGTGCGAAGAACCAGGGATCTTGACACAGCGCTTTCGCTTTAAATCAATCTCGCTCATCTGGAGCAACTGGAGCGTACAAGACTACTGGAGTTGGCTGGTAGAGCATTCTACAGAAGGAGATATGACAAATATTTTGACAATCATGTGGCAAATTTGGGAATGCAGGAATAGGGTGGTGTTCTGTGGTGAAAAGCCTTCTTTCGAGGGCGGAATCGGATGGGTGATTCGAGATTGGGATGGTCACATTGGGTGTGCAGGTTGTCTTTTTACAGCTATCAAACAAGAGATCAAATTTCTGGAAACAATGGCTATTTGTGAAGGTTTTAAAGGTTTGAAAGAAGGAGGTTTTTACTCGAGTATAGCTGAATCGGACTCCCTCGAGGTGGTTCGTTTGCTGAATGGAGATGCTGAAGACCTCATTGAGATTCGATGGTTGATCAACGAGGTGAAATTTCGTGCTTTATACGCCGGTGTAATTTCGATTCACCATATTGCGAGAGTTGGGAACGATTTGGCTCATGAAATTGCACGTTGGGCAATGGTTACAGAGAGATCGCTAGTTAGTCGGCTGCCCTCTCGCCAACCACCGTGTTTATTCCCCGTCGTCGTCGTTTCAGACCTTCAGGGCTTCCGTCAACGAGGTATTGATTCCTTCTTCCCCAGAGACGTCCAGACCTTCAATTTCCGTCGTCAAATAAAGTTTCCGTCGACGTCTTTGCAGGTTTCCGACGCCGTGTAG

Coding sequence (CDS)

ATGATCTTCCAGTGCGAAGAACCAGGGATCTTGACACAGCGCTTTCGCTTTAAATCAATCTCGCTCATCTGGAGCAACTGGAGCGTACAAGACTACTGGAGTTGGCTGGTAGAGCATTCTACAGAAGGAGATATGACAAATATTTTGACAATCATGTGGCAAATTTGGGAATGCAGGAATAGGGTGGTGTTCTGTGGTGAAAAGCCTTCTTTCGAGGGCGGAATCGGATGGGTGATTCGAGATTGGGATGGTCACATTGGGTGTGCAGGTTGTCTTTTTACAGCTATCAAACAAGAGATCAAATTTCTGGAAACAATGGCTATTTGTGAAGGTTTTAAAGGTTTGAAAGAAGGAGGTTTTTACTCGAGTATAGCTGAATCGGACTCCCTCGAGGTGGTTCGTTTGCTGAATGGAGATGCTGAAGACCTCATTGAGATTCGATGGTTGATCAACGAGGTGAAATTTCGTGCTTTATACGCCGGTGTAATTTCGATTCACCATATTGCGAGAGTTGGGAACGATTTGGCTCATGAAATTGCACGTTGGGCAATGGTTACAGAGAGATCGCTAGTTAGTCGGCTGCCCTCTCGCCAACCACCGTGTTTATTCCCCGTCGTCGTCGTTTCAGACCTTCAGGGCTTCCGTCAACGAGGTATTGATTCCTTCTTCCCCAGAGACGTCCAGACCTTCAATTTCCGTCGTCAAATAAAGTTTCCGTCGACGTCTTTGCAGGTTTCCGACGCCGTGTAG

Protein sequence

MIFQCEEPGILTQRFRFKSISLIWSNWSVQDYWSWLVEHSTEGDMTNILTIMWQIWECRNRVVFCGEKPSFEGGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLKEGGFYSSIAESDSLEVVRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWAMVTERSLVSRLPSRQPPCLFPVVVVSDLQGFRQRGIDSFFPRDVQTFNFRRQIKFPSTSLQVSDAV

Homology

[Close]

BLAST of Moc06g12120 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-14
Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 73  GGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLKEGGFYSSIAESDSLEV 132
           GGIGW++RD  G +  A C     ++ I +LE MAICEG + +++        ESDSLE 
Sbjct: 102 GGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEA 161

Query: 133 VRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWAM 185
           + LL+   +D  EI WL+ E+        ++S+ HI+R  N +AH +AR AM
Sbjct: 162 IHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRAM 213

[Close]

BLAST of Moc06g12120 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 85.1 bits (209), Expect = 9.2e-13
Identity = 57/213 (26.76%), Postives = 83/213 (38.97%), Query Frame = 0


Query: 36  LVEHSTEGDMTNILTIMWQIWECRNRVVFCGEKPSF------------------------ 95
           +++ +++ D+  +L   W IW  RN V+F GE  SF                        
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 96  --------------------------------EGGIGWVIRDWDGHIGCAGCLFTAIKQE 155
                                            GGIGW+IR WDG I  AG  F      
Sbjct: 61  LHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNN 120

Query: 156 IKFLETMAICEGFKGLKEGGFYSSI-AESDSLEVVRLLNGDAEDLIEIRWLINEVKFRAL 192
           +K LE  AI EG + L   G    +  E+DS EV  LLN   EDL +  W++ E+     
Sbjct: 121 VKLLEASAILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRD 180

[Close]

BLAST of Moc06g12120 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 2.7e-12
Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 73  GGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLK--------EGGFYSSI 132
           GGIGW++RD  G +  A C     ++ I +LE MAICEG + ++        +       
Sbjct: 102 GGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIH 161

Query: 133 AESDSLEVVRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWAM 185
            ESDSLE + LL+   +D  EI WL+ E+        ++S+ HI+R  N +AH++AR AM
Sbjct: 162 LESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAM 221

[Close]

BLAST of Moc06g12120 vs. NCBI nr
Match: XP_022148737.1 (uncharacterized protein LOC111017329 [Momordica charantia])

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-09
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 73  GGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLKEGGFYSSIAESDSLEV 132
           GG+GW+IR+    I  AG       ++I +LE MAI  G + +      S I ES+SLE 
Sbjct: 28  GGLGWIIRNEKREIKKAGGQTITDARDITYLELMAIWLGIEAVVSSSSVSLIIESESLEA 87

Query: 133 VRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWA 184
           + L+ G  +++ EI WL+ ++K     A +    H+ R GN +A EIA  A
Sbjct: 88  IHLIQGIQQNVTEILWLVQDIKNFGERARLKRFQHVQRDGNSVAQEIANRA 138

[Close]

BLAST of Moc06g12120 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-08
Identity = 44/176 (25.00%), Postives = 67/176 (38.07%), Query Frame = 0


Query: 25  SNWSVQDYWSWLVEHSTEGDMTNILTIMWQIWECRNRVVFCGE----------------- 84
           +NW+ ++YW WL++ + E +    + I  QIWE RN+ +F G                  
Sbjct: 167 TNWTTKEYWEWLMDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIIN 226

Query: 85  -----------------------------KPSFEG-----------------GIGWVIRD 138
                                        KP                     GIGW++RD
Sbjct: 227 SAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRD 286

[Close]

BLAST of Moc06g12120 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14
Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 73  GGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLKEGGFYSSIAESDSLEV 132
           GGIGW++RD  G +  A C     ++ I +LE MAICEG + +++        ESDSLE 
Sbjct: 102 GGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEA 161

Query: 133 VRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWAM 185
           + LL+   +D  EI WL+ E+        ++S+ HI+R  N +AH +AR AM
Sbjct: 162 IHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRAM 213

[Close]

BLAST of Moc06g12120 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.5e-13
Identity = 57/213 (26.76%), Postives = 83/213 (38.97%), Query Frame = 0


Query: 36  LVEHSTEGDMTNILTIMWQIWECRNRVVFCGEKPSF------------------------ 95
           +++ +++ D+  +L   W IW  RN V+F GE  SF                        
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 96  --------------------------------EGGIGWVIRDWDGHIGCAGCLFTAIKQE 155
                                            GGIGW+IR WDG I  AG  F      
Sbjct: 61  LHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNN 120

Query: 156 IKFLETMAICEGFKGLKEGGFYSSI-AESDSLEVVRLLNGDAEDLIEIRWLINEVKFRAL 192
           +K LE  AI EG + L   G    +  E+DS EV  LLN   EDL +  W++ E+     
Sbjct: 121 VKLLEASAILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRD 180

[Close]

BLAST of Moc06g12120 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12
Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 73  GGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLK--------EGGFYSSI 132
           GGIGW++RD  G +  A C     ++ I +LE MAICEG + ++        +       
Sbjct: 102 GGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIH 161

Query: 133 AESDSLEVVRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWAM 185
            ESDSLE + LL+   +D  EI WL+ E+        ++S+ HI+R  N +AH++AR AM
Sbjct: 162 LESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAM 221

[Close]

BLAST of Moc06g12120 vs. ExPASy TrEMBL
Match: A0A6J1D5W1 (uncharacterized protein LOC111017329 OS=Momordica charantia OX=3673 GN=LOC111017329 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 73  GGIGWVIRDWDGHIGCAGCLFTAIKQEIKFLETMAICEGFKGLKEGGFYSSIAESDSLEV 132
           GG+GW+IR+    I  AG       ++I +LE MAI  G + +      S I ES+SLE 
Sbjct: 28  GGLGWIIRNEKREIKKAGGQTITDARDITYLELMAIWLGIEAVVSSSSVSLIIESESLEA 87

Query: 133 VRLLNGDAEDLIEIRWLINEVKFRALYAGVISIHHIARVGNDLAHEIARWA 184
           + L+ G  +++ EI WL+ ++K     A +    H+ R GN +A EIA  A
Sbjct: 88  IHLIQGIQQNVTEILWLVQDIKNFGERARLKRFQHVQRDGNSVAQEIANRA 138

[Close]

BLAST of Moc06g12120 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.1e-09
Identity = 44/176 (25.00%), Postives = 67/176 (38.07%), Query Frame = 0


Query: 25  SNWSVQDYWSWLVEHSTEGDMTNILTIMWQIWECRNRVVFCGE----------------- 84
           +NW+ ++YW WL++ + E +    + I  QIWE RN+ +F G                  
Sbjct: 167 TNWTTKEYWEWLMDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIIN 226

Query: 85  -----------------------------KPSFEG-----------------GIGWVIRD 138
                                        KP                     GIGW++RD
Sbjct: 227 SAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRD 286

The following BLAST results are available for this feature:

BLAST of Moc06g12120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143535.1	2.9e-14	39.29	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_022155262.1	9.2e-13	26.76	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022156777.1	2.7e-12	36.67	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
XP_022148737.1	3.6e-09	36.04	uncharacterized protein LOC111017329 [Momordica charantia]	[more]
XP_022154990.1	1.1e-08	25.00	uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]	[more]

BLAST of Moc06g12120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g12120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP26	1.4e-14	39.29	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DNV9	4.5e-13	26.76	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DSV1	1.3e-12	36.67	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1D5W1	1.8e-09	36.04	uncharacterized protein LOC111017329 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DL64	5.1e-09	25.00	uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Moc06g12120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 58..185 e-value: 1.2E-8 score: 37.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 72..183 e-value: 2.0E-14 score: 53.5
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 73..181 e-value: 2.02191E-12 score: 60.4056
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 72..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g12120.1	Moc06g12120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity