Moc06g11870 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g11870
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionF-box protein
Locationchr6: 8987625 .. 8988383 (+)
RNA-Seq ExpressionMoc06g11870
SyntenyMoc06g11870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAG

mRNA sequence

ATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAG

Coding sequence (CDS)

ATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAG

Protein sequence

MSTVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHRVCYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFNLQLIRVLGTCYVLFLIFLNSI
Homology
BLAST of Moc06g11870 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 2.2e-62
Identity = 143/256 (55.86%), Postives = 162/256 (63.28%), Query Frame = 0

Query: 1   MSTVASFSFHSNF--PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPP---GEAF 60
           M  VA F FH +F   S  ISIVN CNGLLCC   H  T          KMPP    E  
Sbjct: 88  MCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTT----------KMPPYENVEVC 147

Query: 61  ILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFG 120
           ILNPMTNEYFKPPIS+A KD W YY Y FGFSPKTKQYKL RF +  DK A L+E FTFG
Sbjct: 148 ILNPMTNEYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG 207

Query: 121 TTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPH 180
           T  K T +  +P  + MEEH VYFNG LYW+G  L+ P T V+Y LDIE+E+ QEISFP 
Sbjct: 208 TNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHP-TNVLYRLDIEKEELQEISFP- 267

Query: 181 RVCYCCFIGVFNGALLLILD----YVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFN 240
           +   CC IGVFNG+L L L     + Y VWKMEEDFSWTKAFD+ +P  Y+H        
Sbjct: 268 QSGGCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQ 327

Query: 241 LQLIRVLGTCYVLFLI 248
           LQLIR      +L LI
Sbjct: 328 LQLIRACDDGKILCLI 330

BLAST of Moc06g11870 vs. NCBI nr
Match: XP_022154078.1 (F-box/LRR-repeat protein At2g43260-like [Momordica charantia])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 112/176 (63.64%), Postives = 126/176 (71.59%), Query Frame = 0

Query: 2   STVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMT 61
           S+VASFSFHSNFP ASISI++SCNGLLCCYL H RT            PP E FILNPMT
Sbjct: 80  SSVASFSFHSNFPFASISIIDSCNGLLCCYLVHERT----------ARPPREPFILNPMT 139

Query: 62  NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH-KW 121
           NEYFKPP S+A  D+W YY +GFGFS KTKQYKL R SF  +K ATLVEIFT GT+  KW
Sbjct: 140 NEYFKPPFSNA--DVW-YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKW 199

Query: 122 TSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHR 177
             +GFLPP + M + GVYFNGGLYWV        T V+Y LDIE+E+  EISFP R
Sbjct: 200 NPVGFLPPDMTMXDDGVYFNGGLYWVANQ-PFGRTNVMYRLDIEDEELLEISFPQR 241

BLAST of Moc06g11870 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 3.1e-48
Identity = 118/254 (46.46%), Postives = 147/254 (57.87%), Query Frame = 0

Query: 1   MSTVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAF----- 60
           MS+V SF+FH  F ++SISI+NSCNGLL                 ISK   G        
Sbjct: 87  MSSVVSFTFHPKFFTSSISIINSCNGLL--------------SLLISKRKSGSPISYVLC 146

Query: 61  ILNPMTNEYFKPPISDADKD--IWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFT 120
           ILNPMTNEYFK P   +       + Y YG GFSP+TKQYK+AR SF+RD+  T VEIF 
Sbjct: 147 ILNPMTNEYFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDESTTSVEIFA 206

Query: 121 FGTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQ-LPVTKVIYSLDIEEEKFQEIS 180
           FGTT +WT +G LP  V +E+HGVYFNGGLYW    LQ       IY LDIE EK ++IS
Sbjct: 207 FGTTREWTPVGVLPSLV-VEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEKLEKIS 266

Query: 181 FPHRVCYCCFIGVFNGALLL-----ILDYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCG 240
            PH      F GVF+G L L      +D +Y+VWKMEE+ SW KAF +  P    H    
Sbjct: 267 CPHYGGGHFFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHPEHD 325

Query: 241 RPFNLQLIRVLGTC 242
           +P+ +  ++ +  C
Sbjct: 327 QPWGVSQLQPIKVC 325

BLAST of Moc06g11870 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 6.4e-46
Identity = 126/268 (47.01%), Postives = 161/268 (60.07%), Query Frame = 0

Query: 1   MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILN 60
           MSTVASF+FH N  S S  ISI+NSC+GL+   +   R +            PG   +LN
Sbjct: 87  MSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRR---------GHRPGVVCVLN 146

Query: 61  PMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH 120
           PMTNEYFK P   +  D  + YFYG GFSP+TKQYKLAR  +V  +   +VEIF FGT+ 
Sbjct: 147 PMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEF--IVEIFAFGTSC 206

Query: 121 KWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP---VTKVIYSLDIEEEKFQEISFP- 180
           +WT +G + PY   E HGVYFNGGLYWVG   QLP   ++ VIY LD+E++KF++ISFP 
Sbjct: 207 EWTPVGSV-PYFLNEYHGVYFNGGLYWVGGQ-QLPNAGLSDVIYRLDLEDDKFKQISFPL 266

Query: 181 --HRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGR- 240
                    +IGV+N  L L L   D+ Y VWKMEEDFSW K F + +P + +H    R 
Sbjct: 267 DGDDEGDFPYIGVYNDTLYLTLCCGDFEYHVWKMEEDFSWIKEFVLALP-ENVHHSLPRH 326

Query: 241 ---PFNLQLIR------VLGTCYVLFLI 248
               + LQLI+      +L  C  L+LI
Sbjct: 327 HPIGYCLQLIKACEDGNILCLCAGLYLI 340

BLAST of Moc06g11870 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 7.8e-44
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 0

Query: 1   MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYL----GHGRTKTLPCKAFISKMPPGEA 60
           MS VASF+FH +F SAS  I+I+NSC+GL+   +      G+ + + C            
Sbjct: 86  MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC------------ 145

Query: 61  FILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTF 120
            +LNP+TNEYFK P      D    Y YG GFSPKT QYKLAR  F  ++   +V+IF F
Sbjct: 146 -VLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAF 205

Query: 121 GTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKF 180
           GT+ +WT +G +P ++  E HGVYFNGGLYWVG+  QLP       T V+Y LD+ +EKF
Sbjct: 206 GTSCEWTPIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKF 265

Query: 181 QEISFPHRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
           ++IS P       ++GV+NG L L L   D+ Y VWKM+EDFSW+K F + +P   LH
Sbjct: 266 KKISIPFGGDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILH 306

BLAST of Moc06g11870 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06
Identity = 69/275 (25.09%), Postives = 108/275 (39.27%), Query Frame = 0

Query: 9   FHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPM-TNEYFKP 68
           F S+ P     +V SCNGLLC                   +     ++ NP  TN    P
Sbjct: 110 FASSMP--EFDVVGSCNGLLC---------------LSDSLYNDSLYLYNPFTTNSLELP 169

Query: 69  PISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLA----------------TLVEI 128
             S+   D  Q   +GFGF   TK+YK+ +  + R   +                + V+I
Sbjct: 170 ECSNKYHD--QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQI 229

Query: 129 FTFGT-----THKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEE 188
            T  +     +  W SLG  P            NG L++V    +    +   S D+E+E
Sbjct: 230 LTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDE 289

Query: 189 KFQEISFP---------HRV-----CYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKA 239
           +F+EI  P         HR+     C C  +    G L +   +V + + ++E  SW K 
Sbjct: 290 EFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDI---WVMKTYGVKE--SWGKE 349

BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 143/256 (55.86%), Postives = 162/256 (63.28%), Query Frame = 0

Query: 1   MSTVASFSFHSNF--PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPP---GEAF 60
           M  VA F FH +F   S  ISIVN CNGLLCC   H  T          KMPP    E  
Sbjct: 88  MCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTT----------KMPPYENVEVC 147

Query: 61  ILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFG 120
           ILNPMTNEYFKPPIS+A KD W YY Y FGFSPKTKQYKL RF +  DK A L+E FTFG
Sbjct: 148 ILNPMTNEYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG 207

Query: 121 TTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPH 180
           T  K T +  +P  + MEEH VYFNG LYW+G  L+ P T V+Y LDIE+E+ QEISFP 
Sbjct: 208 TNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHP-TNVLYRLDIEKEELQEISFP- 267

Query: 181 RVCYCCFIGVFNGALLLILD----YVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFN 240
           +   CC IGVFNG+L L L     + Y VWKMEEDFSWTKAFD+ +P  Y+H        
Sbjct: 268 QSGGCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQ 327

Query: 241 LQLIRVLGTCYVLFLI 248
           LQLIR      +L LI
Sbjct: 328 LQLIRACDDGKILCLI 330

BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match: A0A6J1DJA3 (F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111021424 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51
Identity = 112/176 (63.64%), Postives = 126/176 (71.59%), Query Frame = 0

Query: 2   STVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMT 61
           S+VASFSFHSNFP ASISI++SCNGLLCCYL H RT            PP E FILNPMT
Sbjct: 80  SSVASFSFHSNFPFASISIIDSCNGLLCCYLVHERT----------ARPPREPFILNPMT 139

Query: 62  NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH-KW 121
           NEYFKPP S+A  D+W YY +GFGFS KTKQYKL R SF  +K ATLVEIFT GT+  KW
Sbjct: 140 NEYFKPPFSNA--DVW-YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKW 199

Query: 122 TSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHR 177
             +GFLPP + M + GVYFNGGLYWV        T V+Y LDIE+E+  EISFP R
Sbjct: 200 NPVGFLPPDMTMXDDGVYFNGGLYWVANQ-PFGRTNVMYRLDIEDEELLEISFPQR 241

BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.8e-44
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 0

Query: 1   MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYL----GHGRTKTLPCKAFISKMPPGEA 60
           MS VASF+FH +F SAS  I+I+NSC+GL+   +      G+ + + C            
Sbjct: 86  MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC------------ 145

Query: 61  FILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTF 120
            +LNP+TNEYFK P      D    Y YG GFSPKT QYKLAR  F  ++   +V+IF F
Sbjct: 146 -VLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAF 205

Query: 121 GTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKF 180
           GT+ +WT +G +P ++  E HGVYFNGGLYWVG+  QLP       T V+Y LD+ +EKF
Sbjct: 206 GTSCEWTPIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKF 265

Query: 181 QEISFPHRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
           ++IS P       ++GV+NG L L L   D+ Y VWKM+EDFSW+K F + +P   LH
Sbjct: 266 KKISIPFGGDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILH 306

BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.8e-44
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 0

Query: 1   MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYL----GHGRTKTLPCKAFISKMPPGEA 60
           MS VASF+FH +F SAS  I+I+NSC+GL+   +      G+ + + C            
Sbjct: 86  MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC------------ 145

Query: 61  FILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTF 120
            +LNP+TNEYFK P      D    Y YG GFSPKT QYKLAR  F  ++   +V+IF F
Sbjct: 146 -VLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAF 205

Query: 121 GTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKF 180
           GT+ +WT +G +P ++  E HGVYFNGGLYWVG+  QLP       T V+Y LD+ +EKF
Sbjct: 206 GTSCEWTPIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKF 265

Query: 181 QEISFPHRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
           ++IS P       ++GV+NG L L L   D+ Y VWKM+EDFSW+K F + +P   LH
Sbjct: 266 KKISIPFGGDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILH 306

BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.0e-44
Identity = 113/236 (47.88%), Postives = 141/236 (59.75%), Query Frame = 0

Query: 1   MSTVASFSFHSNF--PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAF--- 60
           M++V SFSFH  F   S+SISI+N+CNGLL                 ISK  PG      
Sbjct: 84  MNSVGSFSFHPKFSTSSSSISIINACNGLL--------------SLLISKRKPGSVSYVL 143

Query: 61  -ILNPMTNEYFKPPISDADKD--IWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIF 120
            ILNPMTNEYFK P   +       + Y YG GF+PK KQYK+AR SF  D+  TLVEIF
Sbjct: 144 GILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIF 203

Query: 121 TFGTTHK-WTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKV--IYSLDIEEEKFQ 180
            FG+T++ WTS+GFLP  V +E+HGVYFNGGLYWV        + +  IY LDIE E  +
Sbjct: 204 AFGSTYQVWTSVGFLPSLV-VEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLE 263

Query: 181 EISFPHRVCYCCFIGVFNGALLLIL--DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
           +IS P  +    F GVF+G L L +  +  Y+VWKM+++FSW KAF I  P    H
Sbjct: 264 KISCPQHLGGHFFFGVFDGTLYLTVSKNNKYQVWKMKDNFSWIKAFVISSPRNLCH 304

BLAST of Moc06g11870 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-07
Identity = 69/275 (25.09%), Postives = 108/275 (39.27%), Query Frame = 0

Query: 9   FHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPM-TNEYFKP 68
           F S+ P     +V SCNGLLC                   +     ++ NP  TN    P
Sbjct: 110 FASSMP--EFDVVGSCNGLLC---------------LSDSLYNDSLYLYNPFTTNSLELP 169

Query: 69  PISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLA----------------TLVEI 128
             S+   D  Q   +GFGF   TK+YK+ +  + R   +                + V+I
Sbjct: 170 ECSNKYHD--QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQI 229

Query: 129 FTFGT-----THKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEE 188
            T  +     +  W SLG  P            NG L++V    +    +   S D+E+E
Sbjct: 230 LTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDE 289

Query: 189 KFQEISFP---------HRV-----CYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKA 239
           +F+EI  P         HR+     C C  +    G L +   +V + + ++E  SW K 
Sbjct: 290 EFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDI---WVMKTYGVKE--SWGKE 349

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143297.12.2e-6255.86F-box/kelch-repeat protein At3g06240-like [Momordica charantia][more]
XP_022154078.11.1e-5063.64F-box/LRR-repeat protein At2g43260-like [Momordica charantia][more]
XP_038883771.13.1e-4846.46putative F-box protein At1g60370 [Benincasa hispida][more]
XP_038880514.16.4e-4647.01putative F-box protein At1g46984 [Benincasa hispida][more]
XP_008450717.17.8e-4445.80PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... [more]
Match NameE-valueIdentityDescription
Q9SFC75.2e-0625.09F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CQE21.1e-6255.86F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1DJA35.5e-5163.64F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A5D3CIX93.8e-4445.80Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BQV83.8e-4445.80putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... [more]
A0A5D3CM945.0e-4447.88Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
Match NameE-valueIdentityDescription
AT3G07870.13.7e-0725.09F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 23..220
e-value: 2.2E-18
score: 64.4
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 8..231
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 8..231
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 109..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g11870.1Moc06g11870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding