Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAG
mRNA sequence
ATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAG
Coding sequence (CDS)
ATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAG
Protein sequence
MSTVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHRVCYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFNLQLIRVLGTCYVLFLIFLNSI
Homology
BLAST of Moc06g11870 vs. NCBI nr
Match:
XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])
HSP 1 Score: 250.0 bits (637), Expect = 2.2e-62
Identity = 143/256 (55.86%), Postives = 162/256 (63.28%), Query Frame = 0
Query: 1 MSTVASFSFHSNF--PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPP---GEAF 60
M VA F FH +F S ISIVN CNGLLCC H T KMPP E
Sbjct: 88 MCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTT----------KMPPYENVEVC 147
Query: 61 ILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFG 120
ILNPMTNEYFKPPIS+A KD W YY Y FGFSPKTKQYKL RF + DK A L+E FTFG
Sbjct: 148 ILNPMTNEYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG 207
Query: 121 TTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPH 180
T K T + +P + MEEH VYFNG LYW+G L+ P T V+Y LDIE+E+ QEISFP
Sbjct: 208 TNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHP-TNVLYRLDIEKEELQEISFP- 267
Query: 181 RVCYCCFIGVFNGALLLILD----YVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFN 240
+ CC IGVFNG+L L L + Y VWKMEEDFSWTKAFD+ +P Y+H
Sbjct: 268 QSGGCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQ 327
Query: 241 LQLIRVLGTCYVLFLI 248
LQLIR +L LI
Sbjct: 328 LQLIRACDDGKILCLI 330
BLAST of Moc06g11870 vs. NCBI nr
Match:
XP_022154078.1 (F-box/LRR-repeat protein At2g43260-like [Momordica charantia])
HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 112/176 (63.64%), Postives = 126/176 (71.59%), Query Frame = 0
Query: 2 STVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMT 61
S+VASFSFHSNFP ASISI++SCNGLLCCYL H RT PP E FILNPMT
Sbjct: 80 SSVASFSFHSNFPFASISIIDSCNGLLCCYLVHERT----------ARPPREPFILNPMT 139
Query: 62 NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH-KW 121
NEYFKPP S+A D+W YY +GFGFS KTKQYKL R SF +K ATLVEIFT GT+ KW
Sbjct: 140 NEYFKPPFSNA--DVW-YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKW 199
Query: 122 TSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHR 177
+GFLPP + M + GVYFNGGLYWV T V+Y LDIE+E+ EISFP R
Sbjct: 200 NPVGFLPPDMTMXDDGVYFNGGLYWVANQ-PFGRTNVMYRLDIEDEELLEISFPQR 241
BLAST of Moc06g11870 vs. NCBI nr
Match:
XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])
HSP 1 Score: 203.0 bits (515), Expect = 3.1e-48
Identity = 118/254 (46.46%), Postives = 147/254 (57.87%), Query Frame = 0
Query: 1 MSTVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAF----- 60
MS+V SF+FH F ++SISI+NSCNGLL ISK G
Sbjct: 87 MSSVVSFTFHPKFFTSSISIINSCNGLL--------------SLLISKRKSGSPISYVLC 146
Query: 61 ILNPMTNEYFKPPISDADKD--IWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFT 120
ILNPMTNEYFK P + + Y YG GFSP+TKQYK+AR SF+RD+ T VEIF
Sbjct: 147 ILNPMTNEYFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDESTTSVEIFA 206
Query: 121 FGTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQ-LPVTKVIYSLDIEEEKFQEIS 180
FGTT +WT +G LP V +E+HGVYFNGGLYW LQ IY LDIE EK ++IS
Sbjct: 207 FGTTREWTPVGVLPSLV-VEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEKLEKIS 266
Query: 181 FPHRVCYCCFIGVFNGALLL-----ILDYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCG 240
PH F GVF+G L L +D +Y+VWKMEE+ SW KAF + P H
Sbjct: 267 CPHYGGGHFFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHPEHD 325
Query: 241 RPFNLQLIRVLGTC 242
+P+ + ++ + C
Sbjct: 327 QPWGVSQLQPIKVC 325
BLAST of Moc06g11870 vs. NCBI nr
Match:
XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])
HSP 1 Score: 195.3 bits (495), Expect = 6.4e-46
Identity = 126/268 (47.01%), Postives = 161/268 (60.07%), Query Frame = 0
Query: 1 MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILN 60
MSTVASF+FH N S S ISI+NSC+GL+ + R + PG +LN
Sbjct: 87 MSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRR---------GHRPGVVCVLN 146
Query: 61 PMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH 120
PMTNEYFK P + D + YFYG GFSP+TKQYKLAR +V + +VEIF FGT+
Sbjct: 147 PMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEF--IVEIFAFGTSC 206
Query: 121 KWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP---VTKVIYSLDIEEEKFQEISFP- 180
+WT +G + PY E HGVYFNGGLYWVG QLP ++ VIY LD+E++KF++ISFP
Sbjct: 207 EWTPVGSV-PYFLNEYHGVYFNGGLYWVGGQ-QLPNAGLSDVIYRLDLEDDKFKQISFPL 266
Query: 181 --HRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGR- 240
+IGV+N L L L D+ Y VWKMEEDFSW K F + +P + +H R
Sbjct: 267 DGDDEGDFPYIGVYNDTLYLTLCCGDFEYHVWKMEEDFSWIKEFVLALP-ENVHHSLPRH 326
Query: 241 ---PFNLQLIR------VLGTCYVLFLI 248
+ LQLI+ +L C L+LI
Sbjct: 327 HPIGYCLQLIKACEDGNILCLCAGLYLI 340
BLAST of Moc06g11870 vs. NCBI nr
Match:
XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 188.3 bits (477), Expect = 7.8e-44
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 0
Query: 1 MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYL----GHGRTKTLPCKAFISKMPPGEA 60
MS VASF+FH +F SAS I+I+NSC+GL+ + G+ + + C
Sbjct: 86 MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC------------ 145
Query: 61 FILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTF 120
+LNP+TNEYFK P D Y YG GFSPKT QYKLAR F ++ +V+IF F
Sbjct: 146 -VLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAF 205
Query: 121 GTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKF 180
GT+ +WT +G +P ++ E HGVYFNGGLYWVG+ QLP T V+Y LD+ +EKF
Sbjct: 206 GTSCEWTPIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKF 265
Query: 181 QEISFPHRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
++IS P ++GV+NG L L L D+ Y VWKM+EDFSW+K F + +P LH
Sbjct: 266 KKISIPFGGDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILH 306
BLAST of Moc06g11870 vs. ExPASy Swiss-Prot
Match:
Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06
Identity = 69/275 (25.09%), Postives = 108/275 (39.27%), Query Frame = 0
Query: 9 FHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPM-TNEYFKP 68
F S+ P +V SCNGLLC + ++ NP TN P
Sbjct: 110 FASSMP--EFDVVGSCNGLLC---------------LSDSLYNDSLYLYNPFTTNSLELP 169
Query: 69 PISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLA----------------TLVEI 128
S+ D Q +GFGF TK+YK+ + + R + + V+I
Sbjct: 170 ECSNKYHD--QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQI 229
Query: 129 FTFGT-----THKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEE 188
T + + W SLG P NG L++V + + S D+E+E
Sbjct: 230 LTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDE 289
Query: 189 KFQEISFP---------HRV-----CYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKA 239
+F+EI P HR+ C C + G L + +V + + ++E SW K
Sbjct: 290 EFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDI---WVMKTYGVKE--SWGKE 349
BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match:
A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)
HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 143/256 (55.86%), Postives = 162/256 (63.28%), Query Frame = 0
Query: 1 MSTVASFSFHSNF--PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPP---GEAF 60
M VA F FH +F S ISIVN CNGLLCC H T KMPP E
Sbjct: 88 MCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTT----------KMPPYENVEVC 147
Query: 61 ILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFG 120
ILNPMTNEYFKPPIS+A KD W YY Y FGFSPKTKQYKL RF + DK A L+E FTFG
Sbjct: 148 ILNPMTNEYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG 207
Query: 121 TTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPH 180
T K T + +P + MEEH VYFNG LYW+G L+ P T V+Y LDIE+E+ QEISFP
Sbjct: 208 TNCKSTYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHP-TNVLYRLDIEKEELQEISFP- 267
Query: 181 RVCYCCFIGVFNGALLLILD----YVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFN 240
+ CC IGVFNG+L L L + Y VWKMEEDFSWTKAFD+ +P Y+H
Sbjct: 268 QSGGCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQ 327
Query: 241 LQLIRVLGTCYVLFLI 248
LQLIR +L LI
Sbjct: 328 LQLIRACDDGKILCLI 330
BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match:
A0A6J1DJA3 (F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111021424 PE=4 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51
Identity = 112/176 (63.64%), Postives = 126/176 (71.59%), Query Frame = 0
Query: 2 STVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMT 61
S+VASFSFHSNFP ASISI++SCNGLLCCYL H RT PP E FILNPMT
Sbjct: 80 SSVASFSFHSNFPFASISIIDSCNGLLCCYLVHERT----------ARPPREPFILNPMT 139
Query: 62 NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH-KW 121
NEYFKPP S+A D+W YY +GFGFS KTKQYKL R SF +K ATLVEIFT GT+ KW
Sbjct: 140 NEYFKPPFSNA--DVW-YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKW 199
Query: 122 TSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHR 177
+GFLPP + M + GVYFNGGLYWV T V+Y LDIE+E+ EISFP R
Sbjct: 200 NPVGFLPPDMTMXDDGVYFNGGLYWVANQ-PFGRTNVMYRLDIEDEELLEISFPQR 241
BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match:
A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 3.8e-44
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 0
Query: 1 MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYL----GHGRTKTLPCKAFISKMPPGEA 60
MS VASF+FH +F SAS I+I+NSC+GL+ + G+ + + C
Sbjct: 86 MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC------------ 145
Query: 61 FILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTF 120
+LNP+TNEYFK P D Y YG GFSPKT QYKLAR F ++ +V+IF F
Sbjct: 146 -VLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAF 205
Query: 121 GTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKF 180
GT+ +WT +G +P ++ E HGVYFNGGLYWVG+ QLP T V+Y LD+ +EKF
Sbjct: 206 GTSCEWTPIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKF 265
Query: 181 QEISFPHRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
++IS P ++GV+NG L L L D+ Y VWKM+EDFSW+K F + +P LH
Sbjct: 266 KKISIPFGGDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILH 306
BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match:
A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 3.8e-44
Identity = 109/238 (45.80%), Postives = 145/238 (60.92%), Query Frame = 0
Query: 1 MSTVASFSFHSNFPSAS--ISIVNSCNGLLCCYL----GHGRTKTLPCKAFISKMPPGEA 60
MS VASF+FH +F SAS I+I+NSC+GL+ + G+ + + C
Sbjct: 86 MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC------------ 145
Query: 61 FILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTF 120
+LNP+TNEYFK P D Y YG GFSPKT QYKLAR F ++ +V+IF F
Sbjct: 146 -VLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAF 205
Query: 121 GTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKF 180
GT+ +WT +G +P ++ E HGVYFNGGLYWVG+ QLP T V+Y LD+ +EKF
Sbjct: 206 GTSCEWTPIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKF 265
Query: 181 QEISFPHRVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
++IS P ++GV+NG L L L D+ Y VWKM+EDFSW+K F + +P LH
Sbjct: 266 KKISIPFGGDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILH 306
BLAST of Moc06g11870 vs. ExPASy TrEMBL
Match:
A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 5.0e-44
Identity = 113/236 (47.88%), Postives = 141/236 (59.75%), Query Frame = 0
Query: 1 MSTVASFSFHSNF--PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAF--- 60
M++V SFSFH F S+SISI+N+CNGLL ISK PG
Sbjct: 84 MNSVGSFSFHPKFSTSSSSISIINACNGLL--------------SLLISKRKPGSVSYVL 143
Query: 61 -ILNPMTNEYFKPPISDADKD--IWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIF 120
ILNPMTNEYFK P + + Y YG GF+PK KQYK+AR SF D+ TLVEIF
Sbjct: 144 GILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIF 203
Query: 121 TFGTTHK-WTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKV--IYSLDIEEEKFQ 180
FG+T++ WTS+GFLP V +E+HGVYFNGGLYWV + + IY LDIE E +
Sbjct: 204 AFGSTYQVWTSVGFLPSLV-VEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLE 263
Query: 181 EISFPHRVCYCCFIGVFNGALLLIL--DYVYRVWKMEEDFSWTKAFDIFIPNQYLH 224
+IS P + F GVF+G L L + + Y+VWKM+++FSW KAF I P H
Sbjct: 264 KISCPQHLGGHFFFGVFDGTLYLTVSKNNKYQVWKMKDNFSWIKAFVISSPRNLCH 304
BLAST of Moc06g11870 vs. TAIR 10
Match:
AT3G07870.1 (F-box and associated interaction domains-containing protein )
HSP 1 Score: 53.1 bits (126), Expect = 3.7e-07
Identity = 69/275 (25.09%), Postives = 108/275 (39.27%), Query Frame = 0
Query: 9 FHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPM-TNEYFKP 68
F S+ P +V SCNGLLC + ++ NP TN P
Sbjct: 110 FASSMP--EFDVVGSCNGLLC---------------LSDSLYNDSLYLYNPFTTNSLELP 169
Query: 69 PISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLA----------------TLVEI 128
S+ D Q +GFGF TK+YK+ + + R + + V+I
Sbjct: 170 ECSNKYHD--QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQI 229
Query: 129 FTFGT-----THKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEE 188
T + + W SLG P NG L++V + + S D+E+E
Sbjct: 230 LTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDE 289
Query: 189 KFQEISFP---------HRV-----CYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKA 239
+F+EI P HR+ C C + G L + +V + + ++E SW K
Sbjct: 290 EFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDI---WVMKTYGVKE--SWGKE 349
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022143297.1 | 2.2e-62 | 55.86 | F-box/kelch-repeat protein At3g06240-like [Momordica charantia] | [more] |
XP_022154078.1 | 1.1e-50 | 63.64 | F-box/LRR-repeat protein At2g43260-like [Momordica charantia] | [more] |
XP_038883771.1 | 3.1e-48 | 46.46 | putative F-box protein At1g60370 [Benincasa hispida] | [more] |
XP_038880514.1 | 6.4e-46 | 47.01 | putative F-box protein At1g46984 [Benincasa hispida] | [more] |
XP_008450717.1 | 7.8e-44 | 45.80 | PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... | [more] |
Match Name | E-value | Identity | Description | |
Q9SFC7 | 5.2e-06 | 25.09 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CQE2 | 1.1e-62 | 55.86 | F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
A0A6J1DJA3 | 5.5e-51 | 63.64 | F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
A0A5D3CIX9 | 3.8e-44 | 45.80 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
A0A1S3BQV8 | 3.8e-44 | 45.80 | putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... | [more] |
A0A5D3CM94 | 5.0e-44 | 47.88 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
Match Name | E-value | Identity | Description | |
AT3G07870.1 | 3.7e-07 | 25.09 | F-box and associated interaction domains-containing protein | [more] |