Moc06g11580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g11580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr6: 8786336 .. 8790542 (-)
RNA-Seq Expression	Moc06g11580
Synteny	Moc06g11580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAATTTTTGGGGTCATGTTGTTCCAAGTTGGTGGGAGGAGTTGATCATGCATTAGAAGGTGAAGAATACATAGAAAAAGGAAACAAATTGGTGAAATGGAAGATGCCAAAAGTCCCCACTTCCAAAATCTACAGAAAAACAACAAAGCCCTTCACTTTATTCTCTTCTTCAGATCGCTCCATAAGAACCTCAGAGAGCAAAATCAGCTTCGGAAATGGTGGAGGAGCCTTCAAATTGTTTGATAAAGCCCCTTTTTCCTATCGTGGCAAAGGAAAATACTACAACATTATGAACATAGGCTCAGTTCAATTGGGAGTCAAAACCACAACCAGAAAAATCCCTTCAAACGCCTCCATAATTCTGTGCCTTCGTGACAACAGAGTAGAGAGAGTCCCAGATCGTGTTGTGGCCTTGGTGGAATCAAATTTGGGGGATGGCCCATTTTACTTCAATGTTTTTCCAAACATAAATTTGTCTCTGTCTGATGATTCACTGACTAATGTTTTTAGTATCCATGTTTTGATCAATGGGTTTGAGCAGCTCCCAGAAGGGTCTCAGCCAATTGTTTTGAGCTGTAGAACATGTTACAAGTTGAGTTCTAGCAGCTTTGGACCAGAGGCATTGATTGAGAGTCCTGTCGGGAAAACTGTGTTTTTTCAGACACAGATTCGTGAGTCGAATGATGTTGTTCAGAAGGTCACAAATTGGGAGCAAGTTCAGTTGCCACCCAATTGGCCTCCTCAGCTGCAGAAAAGAAAGAGTCTAAAACTGGTTTCTGTTGAAAATGGAATAGCTCGACTGGTGCTTGAATGAATAAAAGTAAGTATTATTGGGTAATTAATTGTAATATTATGTGTGAGCTTAGTTTGAACCACAACAGTTGTGTTTTGGAAAATCCGAGTAGAATGTCTTTAGGTTAATGTATTTTTATCTTTTTTTTGGATCGAAAGAATATGTCATTGCGTAGGTGGAGGGTCGAAGATCTCTACTGGGTTTTATGTAGTTTGGTAGTTGTGAAAATGTTGTCGTTAGCGAATGTATTCCACATTCGAGATTATGTCTTACCAAGCTCTCGTACTCACCAGGGTTGAGGAGGCAGTCTGTGAGTTGGTGCTCAATCTTAGATCTTAGGTGTGGATCGGATCATGAAAAAGAAGGTTCAGTGGTTGTATAATAACCTAAATATAGCTCAATCGTTAATTAAGACCGTCTACTACTTTTGTTGAGATGGAAAGCTTAAAGCTATACTCCCCACATCAAAACGTACAAGTTTCGTGATGTTACTTTATATGCACTTTTGTTCACCCACCTCTCCCTCTCTAAGTATATTAGAGAATAATATCATTTTGATTCTTCCATTAGCATGACATTTAGGCAATTGAGCAAAATACTCTCTGCAAATGTTTTCTGATTCAACAATCCAACAAAATAAACTACTCATATCAGCTGCTGAAAAGAAAGACTAAAAACTTGGTTTTTGGAACAAATTGTGTTCAAATAATTAACTAATGGTTGAATCTTATTTACTTGTAATGAGAAATGGTCTTTTATTTTATTTTGTTTTTTTAAATCGTTTTGAAGGATGTTATTAATATCATATAGGAATATAGGAAATAAGTAGCTGTATTTGCCATTTGGGTAATTTTTATGTTATTCTGTGGATTTGTATGGAGAGAGGAGAGCTGGAAATAAAAATTTTTTATGTCCTCAAATATGATTTAGGATAGACATATAAGAAGTTGAATTAGCACTTTCGATAATTTGGCTAGGTATTTCTAATAACCAAGTCAAATTATACTCCTACTCACGATCATATTAATTTAACACTTTTGGCTTGAGTAGTGATTTTCATTGCAAATATATCTTAAACCTAAATCATACGACGTTATATTCTCTTCGGTATAAGTTCATGTGTTCAACTTTGAAAATCAAATTAATATTGGAGTCCCACATGCGTGAGAAAAACAAAAAGGACGGAACTCCTATGTTGTACACAATCCCGAGTCCGACCCGTAGGTATAAACCAAATGACCCTTCAGCTATTATCTGAAAGGGATTAAAAAAAATATTAGGGTGTGTTTGGTTGGTAATCATAAAAAGAGATTCAATGAAACCCAAGGTTGTATCCTTTGTTTGTAGTATTTTTAAATATGTGTTTGGTAGTAGATTTAGTAATTGAATCTCTTACAAATTAAATATTTAATTTAATCTAAAGTTATATCAATTAATTTATGATATTTTTTATGAATTTCGTATAATTACTATTTTACAACGTTAAATAATTTAGAATACATTATATTTTATGTTTCAATTTTAACGAACATAAAATAAATTTATAATATGAAATAATATATTTATTAAAGTTTTTACCATTTTTTGATATAATTCTATAACTTAAATATTTCGAATTCTAAATCCGAAAACACTCGAAACATAAAAAAAAGTCGTTTTCATAATTTGTATCGTTTGGATTGCAGAATCCAAAAATAATTTTGAAAAACTAATCTCCCAAATCCTATCAAATGCGTGTTGGCTGAATCAAATCCGAAAACAACAAAGAGAATCCGAGCTTCAGACGAAGCTTAATCGTCCATGTACTTTTTTTTTTTAAAATTAATCCTCCATGTACTTAACTTTCACTACTTTTGAACTCACCACTTCACACACATCTACTTTTGAACTGTCTTTTCAAAGTACTTTTCGTATACCATCACTCCACAGTAAGACACAGCTCTTTTTCCAACAAGATTCCATGTCTCTGTAAACTTAGCACAAGGGCCTGAAGCTAGGGCAAGGGGACTTTGGCCAATACATTCCAAGAGAGATCAGTCAGTCTTTTCACTCAGAAAATGGTTCTCTGTTAAAGTTTGTACTTGCTAACTGAGGCTCCCCCTAAACCATGATTTTGTTAAGAAAGGAATTTCCCATTCAACAATTGCAATAGGGATTAAACTTTTTATATATCTTGTCACTGAACTATATATGATCGGGTTACGCACTAGCCTAATTGTAAGTTTAGGAATAGTACTTGATACGTACCTCATAAACCAAATTATATATTTAGTCTGTGTAAATACGTCTATTTTAAAATCGGTAACGATTCTTTTGAAACTATGTCAAACTCTAGTTATGAAATTTTAGTCGTAGACAATCTTAACAACACAATATCAAACTTGAAATTGAAAAGTCAAAACTTCCGTTAGAACCATCAACAGGGACAAATTCTGATGAATCCTCATTATTGAATACAGTCTAAGTAGCCGTAGCCATCGATATGTTGATATTAATATAAATATTCAAGAAGTTGGTCAATATTTATGATATACTGTAAAAACATCAATAAATTTTTTCCTCGAACATCTCCTCCATGACCATGTCTTGGGAGCCTTTTGGATGTGGCTCAAAATAAAATTTTTGGAACTTGTGAAAGATGATGTTTTTTTTCTCAAATGTATTTTGAACTTTAAGCATTAAAAACACTTCAATTTTTTTTTAACCATTCAATCACATACAAATGAGGTGTTTTCTCTAAGTATTCTTATTATAATTTTGAGATTAAAAGCCACATTTGGTCCTGAAAGTTTCATTAAAGTAATGATTCAGTTCTTGAATTTTTAAAAATAATAATTTAATCCTTGTACTTTAAATTTGTCACAATTTAGTCTCTACCGTTAAAAATTTGGTTAGATTTAACAGAAGTATGATGCGGCTTGTATGTGTACAAATTAAATGGCCAACTATGTGGGTCGGTTCAATATCGGATCGGTTTAATTTTAGACCGATCTAGAACTTAAAAAATAATTATTAAAAGAAAAATGTCTTTCTTTCGCCCCGTACTCTTTCATCACCCATATCTCTCCATTTTCCCGTAGTTTTAGTAGGCCACAGCGAAGAGGCACTCGTCAAGAATCACCGAATGGTAACTGCATCGGCTCAAGGTCCCCAATTCCGACTTTGGAATTTCCTAAAATTGCTTGTCGGCCAAGTCGAACGACATGAGGCTACGGCCGAGGTTGTGCCGCCACGACAAAGATACCTAGTGGAGTTTGTCATTGACTCCACTAGGCCGGACAGTGGCAAATTTGCCAATGCTCCTCCAATTGGAGGTTCCAAGAGTGAAAATTTGAACCTTCGAGTGGAGATAAGAGTATCTCTCAATCCAACGAAACCCTACGAAACCCTAGAGAGTACACAATTTTAG

mRNA sequence

ATGCCTCAATTTTTGGGGTCATGTTGTTCCAAGTTGGTGGGAGGAGTTGATCATGCATTAGAAGGTGAAGAATACATAGAAAAAGGAAACAAATTGGTGAAATGGAAGATGCCAAAAGTCCCCACTTCCAAAATCTACAGAAAAACAACAAAGCCCTTCACTTTATTCTCTTCTTCAGATCGCTCCATAAGAACCTCAGAGAGCAAAATCAGCTTCGGAAATGGTGGAGGAGCCTTCAAATTGTTTGATAAAGCCCCTTTTTCCTATCGTGGCAAAGGAAAATACTACAACATTATGAACATAGGCTCAGTTCAATTGGGAGTCAAAACCACAACCAGAAAAATCCCTTCAAACGCCTCCATAATTCTGTGCCTTCGTGACAACAGAGTAGAGAGAGTCCCAGATCGTGTTGTGGCCTTGGTGGAATCAAATTTGGGGGATGGCCCATTTTACTTCAATGTTTTTCCAAACATAAATTTGTCTCTGTCTGATGATTCACTGACTAATGTTTTTAGTATCCATGTTTTGATCAATGGGTTTGAGCAGCTCCCAGAAGGGTCTCAGCCAATTGTTTTGAGCTGTAGAACATGTTACAAGTTGAGTTCTAGCAGCTTTGGACCAGAGGCATTGATTGAGAGTCCTGTCGGGAAAACTGTGTTTTTTCAGACACAGATTCGTGAGTCGAATGATGTTGTTCAGAAGGTCACAAATTGGGAGCAAGTTCAGTTGCCACCCAATTGGCCTCCTCAGCTGCAGAAAAGAAAGAGTCTAAAACTGGTTTCTGTTGAAAATGGAATAGCTCGACTGCGAATGTATTCCACATTCGAGATTATGTCTTACCAAGCTCTCGTACTCACCAGGGTTGAGGAGGCAGTCTTTTTAGTAGGCCACAGCGAAGAGGCACTCGTCAAGAATCACCGAATGGTAACTGCATCGGCTCAAGGTCCCCAATTCCGACTTTGGAATTTCCTAAAATTGCTTGTCGGCCAAGTCGAACGACATGAGGCTACGGCCGAGGTTGTGCCGCCACGACAAAGATACCTAGTGGAGTTTGTCATTGACTCCACTAGGCCGGACAGTGGCAAATTTGCCAATGCTCCTCCAATTGGAGGTTCCAAGAGTGAAAATTTGAACCTTCGAGTGGAGATAAGAGTATCTCTCAATCCAACGAAACCCTACGAAACCCTAGAGAGTACACAATTTTAG

Coding sequence (CDS)

ATGCCTCAATTTTTGGGGTCATGTTGTTCCAAGTTGGTGGGAGGAGTTGATCATGCATTAGAAGGTGAAGAATACATAGAAAAAGGAAACAAATTGGTGAAATGGAAGATGCCAAAAGTCCCCACTTCCAAAATCTACAGAAAAACAACAAAGCCCTTCACTTTATTCTCTTCTTCAGATCGCTCCATAAGAACCTCAGAGAGCAAAATCAGCTTCGGAAATGGTGGAGGAGCCTTCAAATTGTTTGATAAAGCCCCTTTTTCCTATCGTGGCAAAGGAAAATACTACAACATTATGAACATAGGCTCAGTTCAATTGGGAGTCAAAACCACAACCAGAAAAATCCCTTCAAACGCCTCCATAATTCTGTGCCTTCGTGACAACAGAGTAGAGAGAGTCCCAGATCGTGTTGTGGCCTTGGTGGAATCAAATTTGGGGGATGGCCCATTTTACTTCAATGTTTTTCCAAACATAAATTTGTCTCTGTCTGATGATTCACTGACTAATGTTTTTAGTATCCATGTTTTGATCAATGGGTTTGAGCAGCTCCCAGAAGGGTCTCAGCCAATTGTTTTGAGCTGTAGAACATGTTACAAGTTGAGTTCTAGCAGCTTTGGACCAGAGGCATTGATTGAGAGTCCTGTCGGGAAAACTGTGTTTTTTCAGACACAGATTCGTGAGTCGAATGATGTTGTTCAGAAGGTCACAAATTGGGAGCAAGTTCAGTTGCCACCCAATTGGCCTCCTCAGCTGCAGAAAAGAAAGAGTCTAAAACTGGTTTCTGTTGAAAATGGAATAGCTCGACTGCGAATGTATTCCACATTCGAGATTATGTCTTACCAAGCTCTCGTACTCACCAGGGTTGAGGAGGCAGTCTTTTTAGTAGGCCACAGCGAAGAGGCACTCGTCAAGAATCACCGAATGGTAACTGCATCGGCTCAAGGTCCCCAATTCCGACTTTGGAATTTCCTAAAATTGCTTGTCGGCCAAGTCGAACGACATGAGGCTACGGCCGAGGTTGTGCCGCCACGACAAAGATACCTAGTGGAGTTTGTCATTGACTCCACTAGGCCGGACAGTGGCAAATTTGCCAATGCTCCTCCAATTGGAGGTTCCAAGAGTGAAAATTTGAACCTTCGAGTGGAGATAAGAGTATCTCTCAATCCAACGAAACCCTACGAAACCCTAGAGAGTACACAATTTTAG

Protein sequence

MPQFLGSCCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKPFTLFSSSDRSIRTSESKISFGNGGGAFKLFDKAPFSYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCLRDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPEGSQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESNDVVQKVTNWEQVQLPPNWPPQLQKRKSLKLVSVENGIARLRMYSTFEIMSYQALVLTRVEEAVFLVGHSEEALVKNHRMVTASAQGPQFRLWNFLKLLVGQVERHEATAEVVPPRQRYLVEFVIDSTRPDSGKFANAPPIGGSKSENLNLRVEIRVSLNPTKPYETLESTQF

Homology

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BLAST of Moc06g11580 vs. NCBI nr
Match: KAG6590198.1 (hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-89
Identity = 174/276 (63.04%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MPQFLGSCCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKP--FTLFSS 60
           M  F  SC SK V   DH+LE EEY+EKGN LVKW MP VP  K+Y   TK   FT  + 
Sbjct: 1   MSLFFRSCSSKFVD--DHSLEDEEYVEKGNNLVKWTMPNVPIHKLYEHQTKKKLFTFSTK 60

Query: 61  SDRSIRTSESKISFGNGGGAFKLFDKAPFSYRGKGKYYNIMNIGSVQLGVKTTTRKIPSN 120
            DRSIR +E +ISFGNGGG+FKL+ +AP SY  KGK+Y++MNIG VQ+GVKT TRKIPSN
Sbjct: 61  IDRSIRITEGQISFGNGGGSFKLYKQAPSSYGQKGKFYSVMNIGLVQIGVKTITRKIPSN 120

Query: 121 ASIILCLRDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSL-TNVFSIHVLI 180
           ASIILC+RDNR+E+V D ++A+VES LGDGPFYFNVFPN+N SL + SL  NV S+HVL+
Sbjct: 121 ASIILCVRDNRIEKVEDSIIAMVESKLGDGPFYFNVFPNMNFSLFEASLIMNVLSVHVLV 180

Query: 181 NGFEQLPEGSQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQI--------RESN 240
            GF+QL +GS+PIV+SCRTCYKL+ + FGPEAL+ESPVGKTVFFQTQI            
Sbjct: 181 KGFDQLAKGSEPIVVSCRTCYKLNQTKFGPEALLESPVGKTVFFQTQIVGKLNGGGGGGG 240

Query: 241 DVVQKVTNWEQVQLPPNWPPQLQKRKSLKLVSVENG 266
           DVVQKVT W+QVQLP NWPPQL   K   +    NG
Sbjct: 241 DVVQKVTQWDQVQLPSNWPPQLHIPKFPNVFKRLNG 274

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BLAST of Moc06g11580 vs. NCBI nr
Match: KGN66493.1 (hypothetical protein Csa_007053 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 4.0e-82
Identity = 162/257 (63.04%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 1   MPQFLGSCCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKP--FTLFSS 60
           M  F  SC SK   G DH+LE EEY+EKG  LVKWKMP+VP  KIY +  K   F   S 
Sbjct: 1   MSLFFKSCSSKNFVG-DHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSK 60

Query: 61  SDRSIRTSESKISFGNGGGAFKLFDKAPFSY--RGKGKYYNIMNIGSVQLGVKTTTRKIP 120
           +D SIRT+E +ISFGN GG+FKL+ + P SY  R +  ++N MNIG VQ+GVKT T+KIP
Sbjct: 61  NDPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIP 120

Query: 121 SNASIILCLRDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVL 180
            NASIILCLRDNR+E++ D ++ALVES LGDGPFYFNVFPNINLSL   S+TNV S+HVL
Sbjct: 121 PNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVL 180

Query: 181 INGFEQLPEGSQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRE--SNDVVQK 240
           + G +++P+GS PIV++CRTCYKL+ + FG EALIESPVGKTVFFQ +I E   +DVVQK
Sbjct: 181 VKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQK 240

Query: 241 VTNWEQVQLPPNWPPQL 252
           VT W QVQLP +WPP+L
Sbjct: 241 VTMWNQVQLPSDWPPRL 256

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BLAST of Moc06g11580 vs. NCBI nr
Match: KGN66494.1 (hypothetical protein Csa_006902 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-52
Identity = 114/236 (48.31%), Postives = 153/236 (64.83%), Query Frame = 0


Query: 8   CCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKPFTLFSSSDRSIRTSE 67
           C S   GG  H+L+ EEYI+KG  L+KWK+PK+PT+KIY+  + PF  F  SD  I+T E
Sbjct: 5   CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIYK--SNPFIFF--SDPFIKTKE 64

Query: 68  SKISFGNGGGAFKLFDKAPF--SYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCL 127
             +   NG   F+L    P   +++ K ++Y  +N+G +Q+GVKT T KIPSNASIILC+
Sbjct: 65  ETMPCENGSQVFRLISGNPMVDNFQEK-RFYTRLNMGMIQIGVKTLTTKIPSNASIILCV 124

Query: 128 RDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPE 187
            D R +   D ++ LVES L DGP +FN+FPNI + +    L   F +  ++ GFEQLP+
Sbjct: 125 FDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQLPQ 184

Query: 188 GSQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESNDVVQKVTNWEQV 242
           G+ PI L  RTCYKL +S+  P ALIESP GKTVFFQT    S    QKV+ W++V
Sbjct: 185 GTSPISLMWRTCYKLQASAL-PTALIESPQGKTVFFQTNFENSKVADQKVSQWDEV 234

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BLAST of Moc06g11580 vs. NCBI nr
Match: XP_038880673.1 (uncharacterized protein LOC120072292 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 6.4e-48
Identity = 113/235 (48.09%), Postives = 144/235 (61.28%), Query Frame = 0


Query: 8   CCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKPFTLFSSSDRSIRTSE 67
           CCS   GG  HAL+ EEYI+KGN L+KWK+PKVPT+KIY++   PFT F  SD SI+T E
Sbjct: 8   CCSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKR--NPFTFF--SDPSIKTEE 67

Query: 68  SKISFGNGGGAFKLFDKAP-FSYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCLR 127
            K+S  NG  AF+L  K P  +     ++Y  +N+G +Q+GVK  T KIPSNASIILC+ 
Sbjct: 68  EKMSCENGSQAFRLIAKNPIMASFNDNRFYTTINVGMIQIGVKIMTTKIPSNASIILCVF 127

Query: 128 DNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPEG 187
           D+R E   D ++ LVESNL                                 GFEQLPEG
Sbjct: 128 DSRNENFEDAILGLVESNL---------------------------------GFEQLPEG 187

Query: 188 SQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESNDVVQKVTNWEQV 242
           ++PI L  RTCYKL  S+  P AL+ESP GKTV+FQT ++ S   VQKV+ W++V
Sbjct: 188 TRPISLMWRTCYKLQESAL-PNALLESPQGKTVYFQTDLQNSKVAVQKVSKWDEV 204

[Close]

BLAST of Moc06g11580 vs. NCBI nr
Match: KAG6588193.1 (hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-39
Identity = 108/252 (42.86%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 7   SCCSKLVGGVDHALEGEEY--IEKG-NKLVKWKMPKVPTSKIYRKTTKPFTLFSSSDRSI 66
           S CSK      H L+ +EY  +EKG + L+ W +P +PTSKIY+  T  FT FS +   +
Sbjct: 8   SSCSK--SASSHTLDTDEYDIVEKGKDDLLTWNIPTLPTSKIYK--TNLFTHFSRNS-LL 67

Query: 67  RTSESKISFGNGGGAFKLFDKAPFSYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIIL 126
           +T E      NGGG   L  +    +  + KY  I +IG VQ+GVK  TR  P NA ++L
Sbjct: 68  KTKEGNSPLSNGGGYLNLIREDDDLWHLQNKYRTI-HIGMVQIGVKALTRG-PLNAKVLL 127

Query: 127 CLRDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQL 186
           CLRD R   + D ++ +VE+NL DGP YFNVFPNI  SLS   L ++  ++  +  FEQL
Sbjct: 128 CLRDARHRNLQDSLLGMVEANLKDGPLYFNVFPNIVESLSAPRLDDLLFLNAKVREFEQL 187

Query: 187 PEGSQPIVLSCRTCYKLSSSSFGPEALIESPV-GKTVFFQTQIRES-NDVVQKVTNWEQV 246
           PEG + IV+  R CYK+         L+++P  G+T+FFQT    + ND  Q VT W +V
Sbjct: 188 PEGPKNIVVMYRVCYKVLKPGVETRVLLKTPSNGRTIFFQTDFETAMNDFEQGVTVWNEV 247

Query: 247 QLPPNWPPQLQK 254
           QLP NWP    K
Sbjct: 248 QLPENWPTPRSK 252

[Close]

BLAST of Moc06g11580 vs. ExPASy TrEMBL
Match: A0A0A0LXM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82
Identity = 162/257 (63.04%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 1   MPQFLGSCCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKP--FTLFSS 60
           M  F  SC SK   G DH+LE EEY+EKG  LVKWKMP+VP  KIY +  K   F   S 
Sbjct: 1   MSLFFKSCSSKNFVG-DHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSK 60

Query: 61  SDRSIRTSESKISFGNGGGAFKLFDKAPFSY--RGKGKYYNIMNIGSVQLGVKTTTRKIP 120
           +D SIRT+E +ISFGN GG+FKL+ + P SY  R +  ++N MNIG VQ+GVKT T+KIP
Sbjct: 61  NDPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIP 120

Query: 121 SNASIILCLRDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVL 180
            NASIILCLRDNR+E++ D ++ALVES LGDGPFYFNVFPNINLSL   S+TNV S+HVL
Sbjct: 121 PNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVL 180

Query: 181 INGFEQLPEGSQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRE--SNDVVQK 240
           + G +++P+GS PIV++CRTCYKL+ + FG EALIESPVGKTVFFQ +I E   +DVVQK
Sbjct: 181 VKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQK 240

Query: 241 VTNWEQVQLPPNWPPQL 252
           VT W QVQLP +WPP+L
Sbjct: 241 VTMWNQVQLPSDWPPRL 256

[Close]

BLAST of Moc06g11580 vs. ExPASy TrEMBL
Match: A0A0A0LZS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 114/236 (48.31%), Postives = 153/236 (64.83%), Query Frame = 0


Query: 8   CCSKLVGGVDHALEGEEYIEKGNKLVKWKMPKVPTSKIYRKTTKPFTLFSSSDRSIRTSE 67
           C S   GG  H+L+ EEYI+KG  L+KWK+PK+PT+KIY+  + PF  F  SD  I+T E
Sbjct: 5   CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIYK--SNPFIFF--SDPFIKTKE 64

Query: 68  SKISFGNGGGAFKLFDKAPF--SYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCL 127
             +   NG   F+L    P   +++ K ++Y  +N+G +Q+GVKT T KIPSNASIILC+
Sbjct: 65  ETMPCENGSQVFRLISGNPMVDNFQEK-RFYTRLNMGMIQIGVKTLTTKIPSNASIILCV 124

Query: 128 RDNRVERVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPE 187
            D R +   D ++ LVES L DGP +FN+FPNI + +    L   F +  ++ GFEQLP+
Sbjct: 125 FDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQLPQ 184

Query: 188 GSQPIVLSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESNDVVQKVTNWEQV 242
           G+ PI L  RTCYKL +S+  P ALIESP GKTVFFQT    S    QKV+ W++V
Sbjct: 185 GTSPISLMWRTCYKLQASAL-PTALIESPQGKTVFFQTNFENSKVADQKVSQWDEV 234

[Close]

BLAST of Moc06g11580 vs. ExPASy TrEMBL
Match: A0A5D3D5V1 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-37
Identity = 86/170 (50.59%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 74  NGGGAFKLFDKAPF--SYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCLRDNRVE 133
           NG  AF+L    P   S++ K ++  ++N+G +Q+GVKT T KIPSNASIILC+ D R +
Sbjct: 5   NGSQAFRLIYDNPILASFQEK-RFCTMLNMGMIQIGVKTLTTKIPSNASIILCVFDTRND 64

Query: 134 RVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPEGSQPIV 193
              D ++ LVE+ L DGP +FN+FPNI +SL    L     +  ++ GFEQLP+G+ PI 
Sbjct: 65  NFEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTSPIS 124

Query: 194 LSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESNDVVQKVTNWEQV 242
           L  RTCYKL  S+F P ALIESP GKTVFFQT    S   VQKV+ W++V
Sbjct: 125 LMWRTCYKLQGSAF-PTALIESPQGKTVFFQTDFENSKVAVQKVSEWDEV 172

[Close]

BLAST of Moc06g11580 vs. ExPASy TrEMBL
Match: A0A5A7U9X3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 85/170 (50.00%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 74  NGGGAFKLFDKAPF--SYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCLRDNRVE 133
           NG  AF+L    P   S++ K ++  ++N+G +Q+GVKT T KI SNASIILC+ D R +
Sbjct: 5   NGSQAFRLIYDNPILASFQEK-RFCTMLNMGMIQIGVKTLTTKISSNASIILCVFDTRND 64

Query: 134 RVPDRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPEGSQPIV 193
              D ++ LVE+ L DGP +FN+FPNI +SL    L     +  ++ GFEQLP+G+ PI 
Sbjct: 65  NFEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTSPIS 124

Query: 194 LSCRTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESNDVVQKVTNWEQV 242
           L  RTCYKL  S+F P ALIESP GKTVFFQT    S   VQKV+ W++V
Sbjct: 125 LMWRTCYKLQGSAF-PTALIESPQGKTVFFQTDFENSKVAVQKVSEWDEV 172

[Close]

BLAST of Moc06g11580 vs. ExPASy TrEMBL
Match: A5CBG1 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_020242 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.4e-26
Identity = 83/269 (30.86%), Postives = 137/269 (50.93%), Query Frame = 0


Query: 17  DHALEGEE--YIEKGNKLVKWKMPKVPTSKIYRKTTKPFTLFSSSDRSIRTSESKISFGN 76
           D  +  EE  Y +  N L  WK+PKV   +IY+K T  F     +D +I+TSE  +S   
Sbjct: 10  DTVVNSEEINYPKIQNDLDDWKLPKVSNQEIYKKGTFKF----FTDYTIKTSEMSVSLEQ 69

Query: 77  GGGAFKLFDKAPFSYRGKGKYYNIMNIGSVQLGVKTTTRKIPSNASIILCLRDNRVERVP 136
                +L D      + K   YN ++ G +Q+  K  TR +  N SI++CLRDNR     
Sbjct: 70  DDQVIRLLDNRSIE-KHKRDGYNFIHFGMIQVVAKPLTR-LGLNTSIVMCLRDNRHLEYQ 129

Query: 137 DRVVALVESNLGDGPFYFNVFPNINLSLSDDSLTNVFSIHVLINGFEQLPEGSQPIVLSC 196
           D ++  V++ L DGP YF  +PN  + + D  + +   +H+  +GF+  P G+ P+ +  
Sbjct: 130 DSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDYVVLHIKTHGFKIKP-GNSPVSIIT 189

Query: 197 RTCYKLSSSSFGPEALIESPVGKTVFFQTQIRESND-VVQKVTNWEQVQLPPNW------ 256
           R  YK  ++S G  AL  SP  +T +F + + + +D ++ K   W+ V+ P NW      
Sbjct: 190 RFAYKSMNTSVGSGALCTSPKCETTYFHSDMLDKSDFIIPKKILWKDVEFPENWHFANVV 249

Query: 257 PPQLQKRKSL-KLVSVENGIARLRMYSTF 276
           P   Q+ +S+ ++V   +G   L   ++F
Sbjct: 250 PAIAQRSESIEQIVQYPDGGGELVFSNSF 271

The following BLAST results are available for this feature:

BLAST of Moc06g11580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6590198.1	1.5e-89	63.04	hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN66493.1	4.0e-82	63.04	hypothetical protein Csa_007053 [Cucumis sativus]	[more]
KGN66494.1	2.5e-52	48.31	hypothetical protein Csa_006902 [Cucumis sativus]	[more]
XP_038880673.1	6.4e-48	48.09	uncharacterized protein LOC120072292 [Benincasa hispida]	[more]
KAG6588193.1	1.4e-39	42.86	hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc06g11580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g11580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXM3	1.9e-82	63.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1	[more]
A0A0A0LZS0	1.2e-52	48.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1	[more]
A0A5D3D5V1	1.9e-37	50.59	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE...	[more]
A0A5A7U9X3	1.6e-36	50.00	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 P...	[more]
A5CBG1	7.4e-26	30.86	CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_020242 ...	[more]

BLAST of Moc06g11580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028919	Viral movement protein	PFAM	PF01107	MP	coord: 63..203 e-value: 3.4E-13 score: 49.6
None	No IPR available	PANTHER	PTHR46249:SF37	VIRAL MOVEMENT PROTEIN	coord: 35..247
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 35..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g11580.1	Moc06g11580.1	mRNA