Moc06g11460 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g11460
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr6: 8681522 .. 8682448 (+)
RNA-Seq Expression	Moc06g11460
Synteny	Moc06g11460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTTTGGCTTGGAATGTTAGAGGGCTGGGTTCGGCCTTTAAACGAGGCGCCATAAAGGATACTATTTCTACTATCTGCCCCGACATTGTTATCTTATCGAAATCGAAAGCTTCCTGTATCTCTAGTCGCTTTATTAAATCTATATGGAGCTCCATAAGCATAGCTTGGGCCTCTCTTGATGCATCGGGTTCATCTGGTGGCATTATAATCCTTTGGGAAAGACTCTCTATTGAGGCTGAGGAAGTCATTTGTGGCACATACACGATTTCTGTCCTTTTCAAACTTGCTGACAACACACATTGGTGGTTAACAGGGGTCTACGGGCCTGTTCGACGAAGGAAACGAGAACTTTTATGGCAAGAGCTTTATGCTCGAAACGGGCTATGTAGTCCTTTGTGGTTATTAGGGGGCGATTTCAATATCTATAGATGGAGCCATGAAACATCCTCGGCAAACCCCCATCGAGCTGGTATGAGACATTTTAACAAGTTTACTGATTTTGCAGGGCTTATCGATCCTAGTCTCGAAAATGGGCCTTATACATGGTCAAATCTCCGCCATAGACTAGTTCTCTCGCGCATTGACCATTTTCTCTTCTCACAAAGCTGGTCTGAAAAGCCCTCCTTCCATAACACCAGACACTTCCCACGAATTTGTTCGGATCACTACCCTCTTCTCCTTGAATCTCCGACTCATAAATGGAGACCTTGCCCATTTCGATTAGAAAATCTATGGATTCAAGATAAAAATTTCCAGCAGCTCATATCTACTCAGTGGAGTTCAATCACCTCCCATGGATATCCTGGTCATGCCATTATTAAAAAGCTTTATATTTTGGCTCAGAACATAAAAAGGTGGAAAAAGACTTGCGGCCCAAATTTCCCTATAGAAAAGGCTCGCATCACAAAAGAATCTCTCTAA

mRNA sequence

ATGAAGATTTTGGCTTGGAATGTTAGAGGGCTGGGTTCGGCCTTTAAACGAGGCGCCATAAAGGATACTATTTCTACTATCTGCCCCGACATTGTTATCTTATCGAAATCGAAAGCTTCCTGTATCTCTAGTCGCTTTATTAAATCTATATGGAGCTCCATAAGCATAGCTTGGGCCTCTCTTGATGCATCGGGTTCATCTGGTGGCATTATAATCCTTTGGGAAAGACTCTCTATTGAGGCTGAGGAAGTCATTTGTGGCACATACACGATTTCTGTCCTTTTCAAACTTGCTGACAACACACATTGGTGGTTAACAGGGGTCTACGGGCCTGTTCGACGAAGGAAACGAGAACTTTTATGGCAAGAGCTTTATGCTCGAAACGGGCTATGTAGTCCTTTGTGGTTATTAGGGGGCGATTTCAATATCTATAGATGGAGCCATGAAACATCCTCGGCAAACCCCCATCGAGCTGGTATGAGACATTTTAACAAGTTTACTGATTTTGCAGGGCTTATCGATCCTAGTCTCGAAAATGGGCCTTATACATGGTCAAATCTCCGCCATAGACTAGTTCTCTCGCGCATTGACCATTTTCTCTTCTCACAAAGCTGGTCTGAAAAGCCCTCCTTCCATAACACCAGACACTTCCCACGAATTTGTTCGGATCACTACCCTCTTCTCCTTGAATCTCCGACTCATAAATGGAGACCTTGCCCATTTCGATTAGAAAATCTATGGATTCAAGATAAAAATTTCCAGCAGCTCATATCTACTCAGTGGAGTTCAATCACCTCCCATGGATATCCTGGTCATGCCATTATTAAAAAGCTTTATATTTTGGCTCAGAACATAAAAAGGTGGAAAAAGACTTGCGGCCCAAATTTCCCTATAGAAAAGGCTCGCATCACAAAAGAATCTCTCTAA

Coding sequence (CDS)

ATGAAGATTTTGGCTTGGAATGTTAGAGGGCTGGGTTCGGCCTTTAAACGAGGCGCCATAAAGGATACTATTTCTACTATCTGCCCCGACATTGTTATCTTATCGAAATCGAAAGCTTCCTGTATCTCTAGTCGCTTTATTAAATCTATATGGAGCTCCATAAGCATAGCTTGGGCCTCTCTTGATGCATCGGGTTCATCTGGTGGCATTATAATCCTTTGGGAAAGACTCTCTATTGAGGCTGAGGAAGTCATTTGTGGCACATACACGATTTCTGTCCTTTTCAAACTTGCTGACAACACACATTGGTGGTTAACAGGGGTCTACGGGCCTGTTCGACGAAGGAAACGAGAACTTTTATGGCAAGAGCTTTATGCTCGAAACGGGCTATGTAGTCCTTTGTGGTTATTAGGGGGCGATTTCAATATCTATAGATGGAGCCATGAAACATCCTCGGCAAACCCCCATCGAGCTGGTATGAGACATTTTAACAAGTTTACTGATTTTGCAGGGCTTATCGATCCTAGTCTCGAAAATGGGCCTTATACATGGTCAAATCTCCGCCATAGACTAGTTCTCTCGCGCATTGACCATTTTCTCTTCTCACAAAGCTGGTCTGAAAAGCCCTCCTTCCATAACACCAGACACTTCCCACGAATTTGTTCGGATCACTACCCTCTTCTCCTTGAATCTCCGACTCATAAATGGAGACCTTGCCCATTTCGATTAGAAAATCTATGGATTCAAGATAAAAATTTCCAGCAGCTCATATCTACTCAGTGGAGTTCAATCACCTCCCATGGATATCCTGGTCATGCCATTATTAAAAAGCTTTATATTTTGGCTCAGAACATAAAAAGGTGGAAAAAGACTTGCGGCCCAAATTTCCCTATAGAAAAGGCTCGCATCACAAAAGAATCTCTCTAA

Protein sequence

MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWASLDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELLWQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENGPYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCPFRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKKTCGPNFPIEKARITKESL

Homology

[Close]

BLAST of Moc06g11460 vs. NCBI nr
Match: XP_022145142.1 (uncharacterized protein LOC111014657 [Momordica charantia])

HSP 1 Score: 446.0 bits (1146), Expect = 2.6e-121
Identity = 207/308 (67.21%), Postives = 250/308 (81.17%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           M ILAWNVRGLGSA KR  IKDTI+++CPDIVILS++K+S I+++FIKS+WSSISIAWAS
Sbjct: 1   MNILAWNVRGLGSASKRATIKDTITSLCPDIVILSETKSSSINNKFIKSLWSSISIAWAS 60

Query: 61  LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
           LDASG+SGGII+LW++LS  A EVICG ++ISV FKLADN  WWLTGVY PV+++KR+L 
Sbjct: 61  LDASGASGGIILLWDQLSTSAVEVICGHFSISVHFKLADNFTWWLTGVYSPVKQKKRKLF 120

Query: 121 WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
           WQEL+  NGLC P+WLLG DFNIYRWSHETSSANP + GM  FN F DFAGLIDP + NG
Sbjct: 121 WQELFDLNGLCGPIWLLGEDFNIYRWSHETSSANPPQTGMNKFNHFIDFAGLIDPFMNNG 180

Query: 181 PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
            YTWSNLR  +VLSRI+ FL+S+ WS+K S H+ +  PR CSDHYP+LLE P  +W  CP
Sbjct: 181 QYTWSNLRPHIVLSRINRFLYSKGWSDKFSHHHIKRLPRACSDHYPILLEPPNQQWGHCP 240

Query: 241 FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKKTCGPNFPIEK 300
           FRLENLW+QDK+FQQ I   WSS +S GY G+A+IKKL  LAQ+IKR +K  GPN P EK
Sbjct: 241 FRLENLWLQDKHFQQHIEAIWSSGSSDGYLGYALIKKLNTLAQDIKRLRKNFGPNIPREK 300

Query: 301 ARITKESL 309
           A+I ++ L
Sbjct: 301 AKIMEKIL 308

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BLAST of Moc06g11460 vs. NCBI nr
Match: XP_028075126.1 (uncharacterized protein LOC114277426 [Camellia sinensis])

HSP 1 Score: 248.1 bits (632), Expect = 1.0e-61
Identity = 120/292 (41.10%), Postives = 171/292 (58.56%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           MKI +WNVRGL S  KR  +KD + T  PD+V+  ++K       FI+S+W +    WA 
Sbjct: 1   MKIFSWNVRGLRSRRKRDVVKDILKTQQPDVVMFQETKCEECDRVFIRSVWGTRFRRWAV 60

Query: 61  LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
           L ++G SGGI+I+W+   +   EV+ G +++S+ F+  DN  WWLTGVYGP R   R+  
Sbjct: 61  LPSTGRSGGILIMWDDRVVSECEVVVGVFSLSIKFRNRDNKEWWLTGVYGPNRPWSRQDW 120

Query: 121 WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
           W EL    GLC+P W +G DFN+ R + E  +       MR F+ F     LIDP L N 
Sbjct: 121 WDELGGLFGLCTPNWCVGWDFNVVRLASEKLNGVSTNRSMRDFDSFIRECELIDPPLSNA 180

Query: 181 PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRH--FPRICSDHYPLLLESPTHKWRP 240
            +TWSNL+   V  R+D FL +  W E   F N R    PR+ SDH+P++LES   KW P
Sbjct: 181 RFTWSNLQENRVCRRLDRFLHTLGWEE--LFLNIRKEVRPRVVSDHFPVILESCPFKWGP 240

Query: 241 CPFRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKK 291
            PFR EN+W+++++F++     W +   HG+ G   I+KL  +  N+K WK+
Sbjct: 241 SPFRFENMWLENRSFKEFFRDWWENGRVHGWEGFKFIQKLRGVKDNLKVWKR 290

[Close]

BLAST of Moc06g11460 vs. NCBI nr
Match: KAA0058980.1 (uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 9.5e-60
Identity = 128/295 (43.39%), Postives = 172/295 (58.31%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           MK+L WN RGLGS  KR  IK+ I +  PD VIL+++     + R IKS W S SI W  
Sbjct: 472 MKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKITNKRIIKSFWPSNSINWIV 531

Query: 61  LDASGSSGGIIILWERLS---IEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKR 120
            +ASGSSGGI+ILW+  S   +  EE I   +++S  F L +N+ WWLTG+YGP +RRKR
Sbjct: 532 KNASGSSGGILILWDAQSHSLLSQEEAI---FSLSANFFLNNNSSWWLTGLYGPDKRRKR 591

Query: 121 ELLWQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSL 180
              W +L+    L S  W L  D N+ R   ET+S        R  N F     LIDP L
Sbjct: 592 IHFWADLHNLQHLNSFPWSLERDLNVIRMREETTSILSSSHSSRMLNNFISNNLLIDPPL 651

Query: 181 ENGPYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLE--SPTHK 240
            N  +TWSNLR+    SRID FL++ SW    S H TR  PR  SDH+PL+ E  +P  +
Sbjct: 652 TNNRFTWSNLRNPSTFSRIDRFLYNSSWENLFSPHTTRTLPRPTSDHFPLVCEDSNPKLR 711

Query: 241 WRPCPFRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKK 291
           W P PFRL ++ + D  F++ +   W +   +G+PG + I++L  LA +IK W+K
Sbjct: 712 WGPAPFRLNSIALNDPEFKRNMERWWENSVQNGHPGFSFIQRLKSLANHIKPWQK 763

[Close]

BLAST of Moc06g11460 vs. NCBI nr
Match: RVW64408.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 239.6 bits (610), Expect = 3.6e-59
Identity = 114/288 (39.58%), Postives = 160/288 (55.56%), Query Frame = 0


Query: 1    MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
            MKIL+WN RGLGS  KR  ++  +ST  PDIV+L ++K      RF+ S+W    + WA+
Sbjct: 736  MKILSWNTRGLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAA 795

Query: 61   LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
            L A G+SGGI+ILW+   +E  E + G+++++V F   +   +WLT VYGP+    R+  
Sbjct: 796  LPACGASGGIVILWDSSKLECTEKVLGSFSVTVKFNSGEEGSFWLTSVYGPINPLWRKDF 855

Query: 121  WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
            W EL    GL  P W +GGDFN+ R   E          MR F++F   +GLIDP L N 
Sbjct: 856  WLELQDLYGLTFPRWCVGGDFNVIRRISEKLGETRLTLNMRCFDEFIRESGLIDPPLRNA 915

Query: 181  PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
             +TWSN++   +  R+D FLFS  W    S       PR  SDH P+ LE+   KW P P
Sbjct: 916  AFTWSNMQADPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTP 975

Query: 241  FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRW 289
            FR EN+W+    F++     W   T  G+ GH  ++KL  +   +K W
Sbjct: 976  FRFENMWLLHPEFKEKFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEW 1023

[Close]

BLAST of Moc06g11460 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 238.8 bits (608), Expect = 6.2e-59
Identity = 111/290 (38.28%), Postives = 163/290 (56.21%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           MKI++WN+RGLGS  KR  +K+ +  + PDIVIL ++K   +  + +  +W S    W  
Sbjct: 8   MKIISWNIRGLGSRRKRLLVKEQLRRLKPDIVILLETKKEIVDRQLVTGVWGSRFKEWVF 67

Query: 61  LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
             + G SGGI +LW   S+   + + G +++S+       T WWL+G+YGP R+R+R   
Sbjct: 68  SPSLGRSGGIAVLWNSQSVSVIDSMVGDFSVSIRIVENIGTDWWLSGIYGPCRQRERISF 127

Query: 121 WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
           W+EL    G C   W LGGDFN+ R+S E S+       MR FN F     L DP+L N 
Sbjct: 128 WEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNA 187

Query: 181 PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
            +TWSNLR   V  R+D FL S SW +    +  +  PRI SDH P+ L++   KW P P
Sbjct: 188 SFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPSP 247

Query: 241 FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKK 291
           FR EN+W++  +F++ I   W    + G+ G+  + +L +L   +K W K
Sbjct: 248 FRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWSK 297

[Close]

BLAST of Moc06g11460 vs. ExPASy TrEMBL
Match: A0A6J1CVN2 (uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014657 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.2e-121
Identity = 207/308 (67.21%), Postives = 250/308 (81.17%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           M ILAWNVRGLGSA KR  IKDTI+++CPDIVILS++K+S I+++FIKS+WSSISIAWAS
Sbjct: 1   MNILAWNVRGLGSASKRATIKDTITSLCPDIVILSETKSSSINNKFIKSLWSSISIAWAS 60

Query: 61  LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
           LDASG+SGGII+LW++LS  A EVICG ++ISV FKLADN  WWLTGVY PV+++KR+L 
Sbjct: 61  LDASGASGGIILLWDQLSTSAVEVICGHFSISVHFKLADNFTWWLTGVYSPVKQKKRKLF 120

Query: 121 WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
           WQEL+  NGLC P+WLLG DFNIYRWSHETSSANP + GM  FN F DFAGLIDP + NG
Sbjct: 121 WQELFDLNGLCGPIWLLGEDFNIYRWSHETSSANPPQTGMNKFNHFIDFAGLIDPFMNNG 180

Query: 181 PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
            YTWSNLR  +VLSRI+ FL+S+ WS+K S H+ +  PR CSDHYP+LLE P  +W  CP
Sbjct: 181 QYTWSNLRPHIVLSRINRFLYSKGWSDKFSHHHIKRLPRACSDHYPILLEPPNQQWGHCP 240

Query: 241 FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKKTCGPNFPIEK 300
           FRLENLW+QDK+FQQ I   WSS +S GY G+A+IKKL  LAQ+IKR +K  GPN P EK
Sbjct: 241 FRLENLWLQDKHFQQHIEAIWSSGSSDGYLGYALIKKLNTLAQDIKRLRKNFGPNIPREK 300

Query: 301 ARITKESL 309
           A+I ++ L
Sbjct: 301 AKIMEKIL 308

[Close]

BLAST of Moc06g11460 vs. ExPASy TrEMBL
Match: A0A5A7UV84 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001710 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 4.6e-60
Identity = 128/295 (43.39%), Postives = 172/295 (58.31%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           MK+L WN RGLGS  KR  IK+ I +  PD VIL+++     + R IKS W S SI W  
Sbjct: 472 MKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKITNKRIIKSFWPSNSINWIV 531

Query: 61  LDASGSSGGIIILWERLS---IEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKR 120
            +ASGSSGGI+ILW+  S   +  EE I   +++S  F L +N+ WWLTG+YGP +RRKR
Sbjct: 532 KNASGSSGGILILWDAQSHSLLSQEEAI---FSLSANFFLNNNSSWWLTGLYGPDKRRKR 591

Query: 121 ELLWQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSL 180
              W +L+    L S  W L  D N+ R   ET+S        R  N F     LIDP L
Sbjct: 592 IHFWADLHNLQHLNSFPWSLERDLNVIRMREETTSILSSSHSSRMLNNFISNNLLIDPPL 651

Query: 181 ENGPYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLE--SPTHK 240
            N  +TWSNLR+    SRID FL++ SW    S H TR  PR  SDH+PL+ E  +P  +
Sbjct: 652 TNNRFTWSNLRNPSTFSRIDRFLYNSSWENLFSPHTTRTLPRPTSDHFPLVCEDSNPKLR 711

Query: 241 WRPCPFRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKK 291
           W P PFRL ++ + D  F++ +   W +   +G+PG + I++L  LA +IK W+K
Sbjct: 712 WGPAPFRLNSIALNDPEFKRNMERWWENSVQNGHPGFSFIQRLKSLANHIKPWQK 763

[Close]

BLAST of Moc06g11460 vs. ExPASy TrEMBL
Match: M5WJ76 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015871mg PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 7.9e-60
Identity = 112/290 (38.62%), Postives = 162/290 (55.86%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           MKI++WN+RGLGS  KR  +K+ +  + PDIVIL ++K   +  + +  +W S    W  
Sbjct: 323 MKIISWNIRGLGSRRKRLLVKEQLRRLKPDIVILLETKKEIVDRQLVAGVWGSRFKEWVF 382

Query: 61  LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
             + G SGGI +LW   S+   + + G +++S+  +    T WWL+G+YGP R+R+R   
Sbjct: 383 SPSLGRSGGIAVLWNSQSVSVIDSMVGEFSVSIRIEENIGTDWWLSGIYGPCRQRERNSF 442

Query: 121 WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
           W+EL    G C  +W LGGDFN+ R+S E S+       MR FN F     L DP L N 
Sbjct: 443 WEELADLYGYCGDMWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPILLNA 502

Query: 181 PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
            +TWSNLR   V  R+D FL S SW E    +  +  PRI SDH P+ L++   KW P P
Sbjct: 503 SFTWSNLRENAVCRRLDRFLVSGSWEEHFPHYRHKALPRITSDHCPIELDTSRVKWGPSP 562

Query: 241 FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKK 291
           FR EN+W+   +F++ I   W      G+ G+  + +L +L   +K W K
Sbjct: 563 FRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKSKLKVWSK 612

[Close]

BLAST of Moc06g11460 vs. ExPASy TrEMBL
Match: A0A438FWU5 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_70 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59
Identity = 114/288 (39.58%), Postives = 160/288 (55.56%), Query Frame = 0


Query: 1    MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
            MKIL+WN RGLGS  KR  ++  +ST  PDIV+L ++K      RF+ S+W    + WA+
Sbjct: 736  MKILSWNTRGLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAA 795

Query: 61   LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
            L A G+SGGI+ILW+   +E  E + G+++++V F   +   +WLT VYGP+    R+  
Sbjct: 796  LPACGASGGIVILWDSSKLECTEKVLGSFSVTVKFNSGEEGSFWLTSVYGPINPLWRKDF 855

Query: 121  WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
            W EL    GL  P W +GGDFN+ R   E          MR F++F   +GLIDP L N 
Sbjct: 856  WLELQDLYGLTFPRWCVGGDFNVIRRISEKLGETRLTLNMRCFDEFIRESGLIDPPLRNA 915

Query: 181  PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
             +TWSN++   +  R+D FLFS  W    S       PR  SDH P+ LE+   KW P P
Sbjct: 916  AFTWSNMQADPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTP 975

Query: 241  FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRW 289
            FR EN+W+    F++     W   T  G+ GH  ++KL  +   +K W
Sbjct: 976  FRFENMWLLHPEFKEKFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEW 1023

[Close]

BLAST of Moc06g11460 vs. ExPASy TrEMBL
Match: A0A5E4F090 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035017 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.0e-59
Identity = 111/290 (38.28%), Postives = 163/290 (56.21%), Query Frame = 0


Query: 1   MKILAWNVRGLGSAFKRGAIKDTISTICPDIVILSKSKASCISSRFIKSIWSSISIAWAS 60
           MKI++WN+RGLGS  KR  +K+ +  + PDIVIL ++K   +  + +  +W S    W  
Sbjct: 8   MKIISWNIRGLGSRRKRLLVKEQLRRLKPDIVILLETKKEIVDRQLVTGVWGSRFKEWVF 67

Query: 61  LDASGSSGGIIILWERLSIEAEEVICGTYTISVLFKLADNTHWWLTGVYGPVRRRKRELL 120
             + G SGGI +LW   S+   + + G +++S+       T WWL+G+YGP R+R+R   
Sbjct: 68  SPSLGRSGGIAVLWNSQSVSVIDSMVGDFSVSIRIVENIGTDWWLSGIYGPCRQRERISF 127

Query: 121 WQELYARNGLCSPLWLLGGDFNIYRWSHETSSANPHRAGMRHFNKFTDFAGLIDPSLENG 180
           W+EL    G C   W LGGDFN+ R+S E S+       MR FN F     L DP+L N 
Sbjct: 128 WEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNA 187

Query: 181 PYTWSNLRHRLVLSRIDHFLFSQSWSEKPSFHNTRHFPRICSDHYPLLLESPTHKWRPCP 240
            +TWSNLR   V  R+D FL S SW +    +  +  PRI SDH P+ L++   KW P P
Sbjct: 188 SFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPSP 247

Query: 241 FRLENLWIQDKNFQQLISTQWSSITSHGYPGHAIIKKLYILAQNIKRWKK 291
           FR EN+W++  +F++ I   W    + G+ G+  + +L +L   +K W K
Sbjct: 248 FRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWSK 297

The following BLAST results are available for this feature:

BLAST of Moc06g11460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145142.1	2.6e-121	67.21	uncharacterized protein LOC111014657 [Momordica charantia]	[more]
XP_028075126.1	1.0e-61	41.10	uncharacterized protein LOC114277426 [Camellia sinensis]	[more]
KAA0058980.1	9.5e-60	43.39	uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa]	[more]
RVW64408.1	3.6e-59	39.58	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
VVA20479.1	6.2e-59	38.28	Hypothetical predicted protein, partial [Prunus dulcis]	[more]

BLAST of Moc06g11460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g11460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVN2	1.2e-121	67.21	uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5A7UV84	4.6e-60	43.39	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
M5WJ76	7.9e-60	38.62	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A438FWU5	1.8e-59	39.58	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A5E4F090	3.0e-59	38.28	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]

BLAST of Moc06g11460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 1..230 e-value: 1.1E-33 score: 119.0
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 1..230
None	No IPR available	PANTHER	PTHR33710:SF32	SUBFAMILY NOT NAMED	coord: 88..290
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 88..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g11460.1	Moc06g11460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0110165	cellular anatomical entity