Moc06g11420 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g11420
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat-containing protein
Location	chr6: 8660956 .. 8668207 (+)
RNA-Seq Expression	Moc06g11420
Synteny	Moc06g11420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATTAAAACCTCGAAAACCCTCAATTTCGATCGCTCAACTTGCCCAGATCCACGCCCAACTCGTCACAAATCCGAACCCTCTCAACTTCAACCCTTTCCTCGGCGCTTTTGTAGCTTCCATCGCTCCTGAAAATGGCCTCTTCCTCTACAACCAAATGCTTCGCCACCCATCTTCATCTTCCCACAACCACTACACCTTCACCTACGCCCTCAAAGCCTGTTCCTCGCTCCATCAAACCCACAAGGGCCTCGAAATCCACGGCCATCTAGTTAAATCTGGCCACCTTTCCGACATCTTCATCCAAAATTCACTGCTCCATTTCTACATTGTCGATGGCGATGTTCCTTCTGCTTCTCGAATCTTCGCGTCCATGCCTGACCCAGATGTGGTTTCCTGGACATCCATCATTTCGGGGCTCTCCAAGCTGGGTTTTGAGGAGGAAGCTCTAGTTAAGTTCTTGTCTATGAATGTGAGGCCTAATTCTGCTACTCTTGTCACTGCTTTATCTGCTTGTTCTAGTCTTGGATATCTCAAGCTTGGGAAAGCTATACATGGGCTGAGATTGCGGAGTGTGGATGAGGAAAGCGTTAGTTTGGACAATGCCCTTCTGGACTTCTACGTCAAATGTGGGTCCTTGAGGAGTGCAGAGAACCTGTTTGTTAAAATGCCTAATAGAGACGTAGTGTCATGGACTACAATAATTGGGGGTTATGCTCAGAGTGGATTGTGTGAAGAGGCTGTGAGGATCTTCCAAAACATGGTCCAAGAGGGAGAGGCTGAGCCCAATGAGGCCACTCTCATTAATGTATTATCTGCTTGTTCTTCCATGTCTGCTCTGAATTTGGGTCAATGGATTCATTCCTATATCATCTCTAGGCCTGATGTGATACTTAATGGAAATATCGGAAATGCTTTAATAAACATGTATGTCAAATGTGGTAGCATGGAAATGGCAGTTAGGATCTTCAAAACTGTTGAACACAGGGATATCATATCATGCAGCACAGTCATAACTGGGTTAGCCATGAATGGCCTAGGCAAGCAAGCTTTTGTTCTGTTCTCACTCATGCTAGTTCATGGCGTTTCTCCAGACGACATAACATTTCTTGGCCTGTTATCTGGATGCAGCCATGGTGGGCTGATCAATCAAGGCTTGATGGTGTTTAAAGCCATGAAAGATGTTTATAATGTTGCACCTCAGATGAGGCATTATGGCTGCATGGTGGACATGTATGGAAGGGCTGGACTTTTTAGATGAAGCAGAGGCATTCATGAAGGAGATGCCTGTGGAAGCAGAAGGCCCAGTATGGGGAGCTCTGCTGAATGCTTGCCAGATTCATGGGAATGAGAAGAAGTATGAGAAGGTTAGGGAATGGCTGGTTAGAACTAGAAGCAAGGGGGTGACAGTGGGAACTTTGGCTTTGTTGTCAAATACTTATGCAAGTTGTGACAGATGGAAGGATGCTAATGAAGTGAGAGACACCATGAGAAGTAGAGGGTTGAAGAAAATGGCGGGATGTAGTTGGATCGAATTGGTTGACCATTGAATCCTCTGGGTTAGATAGAGAGTAATATGGGTGAGTCCTTCCTAATGGATTAGCCCATTTGACTCTTCTTGAATATCTTAGAGGCAAAGGGATTTTTTTCGTTTGTTTTGTTTTTGGTCTTAATAAGCTTGGTAGAGTTTTTGTCTTGGCGGTGTAGAGTAATTTGCTCGATCAATGGTTCTCATGTATCGTTTCCAAGGGATTAAGTACTGTATGCCCACCAAGTGTCTGTTTATATACATTGGTTTGATGCAATCTGTTGATCAGCTTGCTCTCTGAGTTGGGCTTATAATTATATGTTCGTTCTTCAGCATTTTGAATTTATCACTATTTTTTAATTTAGTTTTAAGATAGCTATTTGAGTTTGAATTTGGTATCAGATAAAAAATTGGATTAAAAGCTCCTTTTATGGTTGGTTAAGAAGTGTAAAGTAATCAATTTTTTTGCATTTGATTTTAGAGAAACCACCCAGAAGTAGGGTGAGTTTAAAATAACGGTTAGAAAGGTGAGGAGTGCCTAACTCATTAAATACACTTTTCAATAATTTTATACAGTTTAGATAGATTAATGATTATTAAACGTCATTTAAGAAACCCTTTCTTAAAACGTTTTGTCGTTTTTCTTACTGTTTCTTCTAAAAGTGGTTATTGGAGAAATGCTTCGTTTGAAAAAGTAAAAGTCATCCTAAACTTGAGCAAGGTCTTCAGTTAACTTACTGTGTCAAGCCTCACTTTTAGTCTTGCTGAGGATTTTGAAATTGGATTTTCTTTCTTTCTACTCTGGTTTGACTAGGACGAAGCTTGATTGTGGCAAAGGTGGCTGTGGAGCATGCACTGTTATGGTTTCTAATTATGATCCAAATTTAAATAACTGCGTGTGTCTCTGCTTGGTTTCTTTCATGTATATTTTCTGAAATATATTGCAATTGAAGTTTTATCAAACTAAACCTTGAATATATACTATCTTATTTCAGGCACTATGATGTTAATGCTTGCTTGGCTCCTGTGTATTCTGTAGAAGAGATGTATGCAATAACAGTTGAGGGTCTGAGTGGTCATAAACGTGGATTGCTTCCAATTCATGTAATATATGCCACTTTTCAGATTCTTTATTATCAGGTACTTTACTTATTTATGTTGTCATTTAGTATCCCATTAGGCTGTGATTCTGGTGATAAAATTTCAACTCAGTTGTACTAAATTGTGAAGACTCTGATCCTTTTATCCCATTTCATTTGAAATTCTGGATCTTATTTTTCTCTTTTGATGGCAATCTTGATCTTATTGGGTTTAAAACTGTATATAAAAGTTGACTAGGACCCTAAGCCTTATATCTCAGTCACACTAGAGAGGGTAGAGGATAACAAAGAAGACTTCAAGCTTGCCATGGTCATATAATTGCAGTTTTATGAATCAAACCGTCAACTTTTTCTAAATGAATTCATTGCAGGAGGCATTGGCAAGTTGACATGGTTCACAGTGTGGATTTTGTACTCCTGGCCTTATCATGTCCATATATGCATTATTAAGGTCAAGTAAAAGTCCACCTAGTGAAGACTGGAGAGCAAATTGAAAAATGCTTTGTAGGAAATCTGTGTCGATAGCTTCAAGAGCAAAGTTCAGAATTATTAATTGCAAGGGAAAGATTAAAACAACATTGGCTGAATTTTTTTTCCTGGGTTACCGTAAAGTGGATTTGGCAAATGATAAATTATTACTCTCTATATTCTTGCCGTGGAGTAGGATTTTTGAGTATGTGAAAGAGTTTAAACAGGCTCACAGGCGAGACGATGACATGTAAATGCTGGTATATGTGTCTTTCTCAAGGAAGAAGATAAAAATTGGTTTGTTTCGGATGCATCCATTGTTTATGGTGGGGTTGCTCCATTATTACTTTCAACAAAAAAGACTAAAAATATCTAATTGGGAAAATTTGGGATCGAGTGCTACTCAAGGATGCATTAAAAGTCTTAGAAGAAGATATTTCGCTGCAGGAAAATGCTCCAGGAGGTACGGTGGAGTTCCGCAAACCTTTGACTCTAAGATTCTTCTTTAAATTTTATCTTTGGGTTTCTCTTGAGATGGAGAGGCATAACCTTGGAGAGAGTATCATTGTCACTTCTCTCTGCCGTAAAATCATTTCAATGGCCACATGTCATTGGAAGTTAGGACTATTTAATCAAAAGACATGGGACAGTTGTCGGCTCTTCTGAAGTTCATCTTTCTGTAAGACTTCAGGTATGTAAATATGTATCAGTTTATATATTGCAATGAACCAAATACATGTATAACGAACTAATATCTGGTATATATCTCCAGAATAACATGTTTCAATTATCTCCTCATGGTCTGGATGCTGCTTTGATTCTGAGCTAGAAACCTCATGCGTGCATATGTTCCATAGATGATTTGGAACTTGGAAGCTAGGAAATCTGCTGGTTTTGCTGGCATCTTCCTGGCCAAGGACATCCCAGGTGATAATAAGTTTGGGCCAGTTATTCCTGATGAGGAACTTTTTGCTTCAGAATTTGTCACTTGCATGGCTCAGGTAATGAAAGCTTATTCTACATTCTGACTGCACCTTGCTTTATGTTTTAATATGATATGTATGTTAGAAAATGTATGGATTAGTAAACCATCTTGGGATGGTCTAGTGGTCAATGAGCACGAATGTAAATAGAAAATGACCTTGAGCACGAATGTAAATAGAAAATGACCTTGAGCACGAATGTAAATAGAAAATGACCTAGAGGGAATAGGTTCAAACCATGGTGGCCACCTACCTAGGGATTAAATATCTTACGAAACTGTCCTGGCACATGTTTGGAGCTTGGTACTTTTTATTGGGATTCTTTAAAGAACTTACTAACTCTAAGAAGGCTAAGAAGGTTTGCAAAGATCTCAATAAGCCAAGACAAGAAATCAACTGAATACAGCTAGGATAAAAGTTTGCTTTTTGAGATATCTATGAATTTATTTCCTCTATATTATTCACCAAGGATCCTAGTTTCTTACTCTTAACCATGCACTTTTAATTTTTAGGGGAGAAAAAGGGAAAATAAACCATAGTTACAAGGAATGATCAGGTTGGACACAAGGCTATGGGAGAGAGAGATGCAAGAGGAGAGAAAACAAGTAATTTGCATAGTAAATCTCTCATTTCTTTAGGCATCACACTCTAAAATTTAGGACTAATCTGTTTTTATTTTAATATAATGTTCTATTTTATATTGTTGAAGAAAATGTAACTTTTTTACAGACTATAGGAGTAGTAGTTACTGATACGCATGAAAATGCAAAACTAGTGACAAGAATTGATGCAAGAAATATAAATAGTAGCTACAAAGAAAAGAAAATGAAATCCTTGCCTATTAGGATAAGAAAACACTTACATATTAGAACAAGGAAATCCTAACTATTAAAACCTAAATACAAAACCATCCTGTTGTAGCTAGTGGTCAATAAGGGCCAATGTAAATAGCAAAGGGCTTAGAGGGAATAGGTTCAAACTATGGTAGCTACTTATCTAGGATTTAATATCCTACGAATTACCTTGACAACCAAATATAGTACGATTAGTATTCGGATGGGACGGTCGTAAAAGAATATAATTTAACGCTCCTTTTCTCCATTCCCATTTATAGAATCTAAAAATAATTTTAAAAAACAAATCTACAAAACGATTTGAGGGAAGAGTGGAGTTGTCAAACTCCCTCGGCTGGACAATTTAGTTTTTTTGGAATTTGTTTTATGTTAAGTTGTTTTCTTCTTATTTTCTCAAAAAATAAAATAAAATAATTTTGTGAATTTGGAAGTCCGGATTACATGTTAAACAATAGAAAAATGTTTTTTTCCCTTCTTTTTGGTCTTGGAGGAGAAGCACAAAAAAACAAATGCTCTACCTTGGTAGAGATTTTTGCATTTGGCAGTACAAGTCGAAGCCCGGAATGGACCCCTGTCGGCCTTGAGCCTTTCTCAATTGATGATCATGGTGTTTATTTCAATGGAGGCCTCTATTGGGTTAGAGGAAATATGATGCAAATATCATTATACGTTTGGATATAGAAGATGAGAAATTAGAGGAAATTTCTTGTCCCCAACTTAGGATGCTGATCACTTTGCCATTGAAGTCTTTAATGGCACCTTCTGTCTAACTTGTTGTATGGAATTGGAGTTCGAGTACCATGTGTGGAAGATGTAAGATTCTTCGTGGGCTAAAGCATTTGTTGTTGCTATACCAGAAAAATACATGTACTCCTCTTGATGGCTTCCAACTCATCAAACTCTGTGAAGATGGGAAGATCTTGTGTCTTGTTGCTGGATTTCATTTAATCTTGTATGACTCAGCCACTCAGAGGAAGATGTTGAAATTAAGGAACATTTAGTGAATGTTCATCAAATTGACTCCTTCAATTTTGGTTCTCTCCGCAAAATTTTAGTGGGCGAACCAAAGGTATGATTGAAGTGAAGGATGATTTTTGTTTCATTTGATTCCTAAGTTTATTTAATTTCTCAAGTGTAACCTATCAAAGAAGTATTATATTCGAGTATGAATTTTTATGCATGGGTAAAGAATATTGGGCAAATTAATAATACTTTGGTTGTAAAATATATAAAAAAAAGACATAGAATATAAATATATTAAAAAATATTTTAAGAAAATCGCGTACAATGGAAGTCAACGTAAAATGTAGGCTATTTCTCCTACTGACTTATCTCTCCATATCCTCATATACGATGCATTGGCACTTAAATTGCATCAATTACACACTTAACCTACTTTTGTAAATAGTTTGAATATCTAATTTTTTTTATTTAAATTACATTTATTTTGTTATTACTTTCAAATTTGCATTAATATTTTTTAAAATTACATTATTCTTTGAGGAAAAAAAAGTAAGTATAGGTTCCCACAGAGTAAAAAACAAATGTTGATCTCAAACCCTATTTATCATATATTGGATTAAAAATAGTGTATGTGCTCCCTTGATAATTTATTAGTTCGGCCACTGGCTTTTTATGTATTTTTTTTTTCTCGTAAAAATAGTGAGGGTGAGCCGAGAGAGAATCTGAGAGCTCAGTTAGAATTTTTTTTATGTCCCGTGATATCCATCGAAGAGTTTGAAGAGACTTGTGTAGAGTAATTCGTTAGGGAAAGGTTGAGAGAAATTATTGTAAACTATACAGTAAACTCTGGGCAAATTCTCCCGACAACAGTAGTATAGAGTTGCCAGGTGAGGTATGCAGTGAGCTGAGAAGAGAGCGAGATTGACGAGCGTGAGCGAGCTAAGAGTCACCTTCTAAGAACAGGTAGCGAGGTCCAAGGTCAGTACTCTCAGACCGTCTCTCGACATGGGGGCTGGCGTTGGTCGAACTTTTACCCTGTATCTGACACGAAAATCGAGGTCGAGATATCAAGGTGGGTTGGGTTTGAACGTTTTCACCCTACATAGGGAGGGATTCGTGCCTTCGACCTTCGATCCAAAAGCCCAAACATCGAAATAGGAGTAGTAATGGTCAAGTGAAGGTAGCTCGGGAGAGAGTGGCTTTTCCCTTTGGGGGCCTAAGTTTGTGTTCACACCCTGGAGTATGGAGTAGGTCGTCTTCTGGTGGCTTGGCCAAGGACTTAGGAATCCAAAGTATGGAAATTCAAGCATATGAGGGTTCAGCTACTTGCAGACAAGACCCTAGCCTTCATTAA

mRNA sequence

ATGCTATTAAAACCTCGAAAACCCTCAATTTCGATCGCTCAACTTGCCCAGATCCACGCCCAACTCGTCACAAATCCGAACCCTCTCAACTTCAACCCTTTCCTCGGCGCTTTTGTAGCTTCCATCGCTCCTGAAAATGGCCTCTTCCTCTACAACCAAATGCTTCGCCACCCATCTTCATCTTCCCACAACCACTACACCTTCACCTACGCCCTCAAAGCCTGTTCCTCGCTCCATCAAACCCACAAGGGCCTCGAAATCCACGGCCATCTAGTTAAATCTGGCCACCTTTCCGACATCTTCATCCAAAATTCACTGCTCCATTTCTACATTGTCGATGGCGATGTTCCTTCTGCTTCTCGAATCTTCGCGTCCATGCCTGACCCAGATGTGGTTTCCTGGACATCCATCATTTCGGGGCTCTCCAAGCTGGGTTTTGAGGAGGAAGCTCTAGTTAAGTTCTTGTCTATGAATGTGAGGCCTAATTCTGCTACTCTTGTCACTGCTTTATCTGCTTGTTCTAGTCTTGGATATCTCAAGCTTGGGAAAGCTATACATGGGCTGAGATTGCGGAGTGTGGATGAGGAAAGCGTTAGTTTGGACAATGCCCTTCTGGACTTCTACGTCAAATGTGGGTCCTTGAGGAGTGCAGAGAACCTGTTTGTTAAAATGCCTAATAGAGACGTAGTGTCATGGACTACAATAATTGGGGGTTATGCTCAGAGTGGATTGTGTGAAGAGGCTGTGAGGATCTTCCAAAACATGGTCCAAGAGGGAGAGGCTGAGCCCAATGAGGCCACTCTCATTAATGTATTATCTGCTTGTTCTTCCATGTCTGCTCTGAATTTGGGTCAATGGATTCATTCCTATATCATCTCTAGGCCTGATGTGATACTTAATGGAAATATCGGAAATGCTTTAATAAACATGTATGTCAAATGTGGTAGCATGGAAATGGCAGTTAGGATCTTCAAAACTGTTGAACACAGGGATATCATATCATGCAGCACAGTCATAACTGGGTTAGCCATGAATGGCCTAGGCAAGCAAGCTTTTGTTCTGTTCTCACTCATGCTAGTTCATGGCGTTTCTCCAGACGACATAACATTTCTTGGCCTGTTATCTGGATGCAGCCATGGGCTGGACTTTTTAGATGAAGCAGAGGCATTCATGAAGGAGATGCCTGTGGAAGCAGAAGGCCCAGTATGGGGAGCTCTGCTGAATGCTTGCCAGATTCATGGGAATGAGAAGAAGTATGAGAAGGTTAGGGAATGGCTGGTTAGAACTAGAAGCAAGGGGGTGACAGTGGGAACTTTGGCTTTGTTGTCAAATACTTATGCAAGTTGTGACAGATGGAAGGATGCTAATGAAGTGAGAGACACCATGAGAAGACGAAGCTTGATTGTGGCAAAGGTGGCTGTGGAGCATGCACTGTTATGGCACTATGATGTTAATGCTTGCTTGGCTCCTGTGTATTCTGTAGAAGAGATGTATGCAATAACAGTTGAGGGTCTGAGTGGTCATAAACGTGGATTGCTTCCAATTCATGTAATATATGCCACTTTTCAGATTCTTTATTATCAGGACTATTTAATCAAAAGACATGGGACAGTTGTCGGCTCTTCTGAAGTTCATCTTTCTGTAAGACTTCAGATGATTTGGAACTTGGAAGCTAGGAAATCTGCTGGTTTTGCTGGCATCTTCCTGGCCAAGGACATCCCAGGTGATAATAAGTTTGGGCCAGTTATTCCTGATGAGGAACTTTTTGCTTCAGAATTTGTCACTTGCATGGCTCAGGATGCTGATCACTTTGCCATTGAAGTCTTTAATGGCACCTTCTGTCTAACTTGTTGTATGGAATTGGAGTTCGAGTACCATGTGTGGAAGATCCACTCAGAGGAAGATGTTGAAATTAAGGAACATTTAGTGAATGTTCATCAAATTGACTCCTTCAATTTTGGTTCTCTCCGCAAAATTTTAGTGGGCGAACCAAAGGGAAAGGTTGAGAGAAATTATTGTAAACTATACAGTAAACTCTGGGCAAATTCTCCCGACAACAGTAGTATAGAGTTGCCAGGGAGGGATTCGTGCCTTCGACCTTCGATCCAAAAGCCCAAACATCGAAATAGGAGTAGTAATGGTCAAGTGAAGGTAGCTCGGGAGAGAGTGGCTTTTCCCTTTGGGGGCCTAAGTTTGTGTTCACACCCTGGAGTATGGAGTAGGTCGTCTTCTGGTGGCTTGGCCAAGGACTTAGGAATCCAAAGTATGGAAATTCAAGCATATGAGGGTTCAGCTACTTGCAGACAAGACCCTAGCCTTCATTAA

Coding sequence (CDS)

ATGCTATTAAAACCTCGAAAACCCTCAATTTCGATCGCTCAACTTGCCCAGATCCACGCCCAACTCGTCACAAATCCGAACCCTCTCAACTTCAACCCTTTCCTCGGCGCTTTTGTAGCTTCCATCGCTCCTGAAAATGGCCTCTTCCTCTACAACCAAATGCTTCGCCACCCATCTTCATCTTCCCACAACCACTACACCTTCACCTACGCCCTCAAAGCCTGTTCCTCGCTCCATCAAACCCACAAGGGCCTCGAAATCCACGGCCATCTAGTTAAATCTGGCCACCTTTCCGACATCTTCATCCAAAATTCACTGCTCCATTTCTACATTGTCGATGGCGATGTTCCTTCTGCTTCTCGAATCTTCGCGTCCATGCCTGACCCAGATGTGGTTTCCTGGACATCCATCATTTCGGGGCTCTCCAAGCTGGGTTTTGAGGAGGAAGCTCTAGTTAAGTTCTTGTCTATGAATGTGAGGCCTAATTCTGCTACTCTTGTCACTGCTTTATCTGCTTGTTCTAGTCTTGGATATCTCAAGCTTGGGAAAGCTATACATGGGCTGAGATTGCGGAGTGTGGATGAGGAAAGCGTTAGTTTGGACAATGCCCTTCTGGACTTCTACGTCAAATGTGGGTCCTTGAGGAGTGCAGAGAACCTGTTTGTTAAAATGCCTAATAGAGACGTAGTGTCATGGACTACAATAATTGGGGGTTATGCTCAGAGTGGATTGTGTGAAGAGGCTGTGAGGATCTTCCAAAACATGGTCCAAGAGGGAGAGGCTGAGCCCAATGAGGCCACTCTCATTAATGTATTATCTGCTTGTTCTTCCATGTCTGCTCTGAATTTGGGTCAATGGATTCATTCCTATATCATCTCTAGGCCTGATGTGATACTTAATGGAAATATCGGAAATGCTTTAATAAACATGTATGTCAAATGTGGTAGCATGGAAATGGCAGTTAGGATCTTCAAAACTGTTGAACACAGGGATATCATATCATGCAGCACAGTCATAACTGGGTTAGCCATGAATGGCCTAGGCAAGCAAGCTTTTGTTCTGTTCTCACTCATGCTAGTTCATGGCGTTTCTCCAGACGACATAACATTTCTTGGCCTGTTATCTGGATGCAGCCATGGGCTGGACTTTTTAGATGAAGCAGAGGCATTCATGAAGGAGATGCCTGTGGAAGCAGAAGGCCCAGTATGGGGAGCTCTGCTGAATGCTTGCCAGATTCATGGGAATGAGAAGAAGTATGAGAAGGTTAGGGAATGGCTGGTTAGAACTAGAAGCAAGGGGGTGACAGTGGGAACTTTGGCTTTGTTGTCAAATACTTATGCAAGTTGTGACAGATGGAAGGATGCTAATGAAGTGAGAGACACCATGAGAAGACGAAGCTTGATTGTGGCAAAGGTGGCTGTGGAGCATGCACTGTTATGGCACTATGATGTTAATGCTTGCTTGGCTCCTGTGTATTCTGTAGAAGAGATGTATGCAATAACAGTTGAGGGTCTGAGTGGTCATAAACGTGGATTGCTTCCAATTCATGTAATATATGCCACTTTTCAGATTCTTTATTATCAGGACTATTTAATCAAAAGACATGGGACAGTTGTCGGCTCTTCTGAAGTTCATCTTTCTGTAAGACTTCAGATGATTTGGAACTTGGAAGCTAGGAAATCTGCTGGTTTTGCTGGCATCTTCCTGGCCAAGGACATCCCAGGTGATAATAAGTTTGGGCCAGTTATTCCTGATGAGGAACTTTTTGCTTCAGAATTTGTCACTTGCATGGCTCAGGATGCTGATCACTTTGCCATTGAAGTCTTTAATGGCACCTTCTGTCTAACTTGTTGTATGGAATTGGAGTTCGAGTACCATGTGTGGAAGATCCACTCAGAGGAAGATGTTGAAATTAAGGAACATTTAGTGAATGTTCATCAAATTGACTCCTTCAATTTTGGTTCTCTCCGCAAAATTTTAGTGGGCGAACCAAAGGGAAAGGTTGAGAGAAATTATTGTAAACTATACAGTAAACTCTGGGCAAATTCTCCCGACAACAGTAGTATAGAGTTGCCAGGGAGGGATTCGTGCCTTCGACCTTCGATCCAAAAGCCCAAACATCGAAATAGGAGTAGTAATGGTCAAGTGAAGGTAGCTCGGGAGAGAGTGGCTTTTCCCTTTGGGGGCCTAAGTTTGTGTTCACACCCTGGAGTATGGAGTAGGTCGTCTTCTGGTGGCTTGGCCAAGGACTTAGGAATCCAAAGTATGGAAATTCAAGCATATGAGGGTTCAGCTACTTGCAGACAAGACCCTAGCCTTCATTAA

Protein sequence

MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLVHGVSPDDITFLGLLSGCSHGLDFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNTYASCDRWKDANEVRDTMRRRSLIVAKVAVEHALLWHYDVNACLAPVYSVEEMYAITVEGLSGHKRGLLPIHVIYATFQILYYQDYLIKRHGTVVGSSEVHLSVRLQMIWNLEARKSAGFAGIFLAKDIPGDNKFGPVIPDEELFASEFVTCMAQDADHFAIEVFNGTFCLTCCMELEFEYHVWKIHSEEDVEIKEHLVNVHQIDSFNFGSLRKILVGEPKGKVERNYCKLYSKLWANSPDNSSIELPGRDSCLRPSIQKPKHRNRSSNGQVKVARERVAFPFGGLSLCSHPGVWSRSSSGGLAKDLGIQSMEIQAYEGSATCRQDPSLH

Homology

[Close]

BLAST of Moc06g11420 vs. NCBI nr
Match: XP_022154335.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momordica charantia] >XP_022154336.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momordica charantia] >XP_022154337.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momordica charantia])

HSP 1 Score: 904.4 bits (2336), Expect = 6.6e-259
Identity = 462/502 (92.03%), Postives = 462/502 (92.03%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS
Sbjct: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS
Sbjct: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
           RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK
Sbjct: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA
Sbjct: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN
Sbjct: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV
Sbjct: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HGVSPDDITFLGLLSGCSHG                                      LD
Sbjct: 361 HGVSPDDITFLGLLSGCSHGGLINQGLMVFKAMKDVYNVAPQMRHYGCMVDMYGRAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT
Sbjct: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 480

[Close]

BLAST of Moc06g11420 vs. NCBI nr
Match: XP_011660133.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745752.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745757.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745768.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >KGN66483.1 hypothetical protein Csa_006958 [Cucumis sativus])

HSP 1 Score: 740.3 bits (1910), Expect = 1.6e-209
Identity = 378/502 (75.30%), Postives = 416/502 (82.87%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M LKP KPSISIAQ  QIHA+L+TNP P  FNP LG+ V SI PENGLFLYNQMLR+P  
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYP-- 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LHQT KGLEIH HL+KSGHLSDIFIQNSLLHFYI+DGDV SAS
Sbjct: 61  SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
            IF S+PDPDVVSWTSIISGLSKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 121 LIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLR+R+++EE+V L+NALLDFYV+C  LRSAENLF KMP RDVVSWTT+IGGYA
Sbjct: 181 LGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVR+FQNMV  GEA PNEATL+NVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 241 QSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IFK +EH+DI+S ST+I+GLAMNGLGKQAFVLFSLMLV
Sbjct: 301 GNVGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HGVSPDDITFLGLLS CSHG                                      LD
Sbjct: 361 HGVSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEGPVWGALL+ACQ+HGNEKKYEKVREWL+   SKGVTVGT ALLSNT
Sbjct: 421 EAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLL--GSKGVTVGTFALLSNT 480

[Close]

BLAST of Moc06g11420 vs. NCBI nr
Match: XP_038878297.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 739.6 bits (1908), Expect = 2.8e-209
Identity = 377/502 (75.10%), Postives = 416/502 (82.87%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           MLLKP KPSI IAQLAQIH  L+ NP P   NP LG+ V S++PENGLFLYNQMLR+P  
Sbjct: 1   MLLKPPKPSILIAQLAQIHTNLLINPKPHILNPLLGSLVNSVSPENGLFLYNQMLRYP-- 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LH+T KGLEIH HL+KSGHLSDIF+QNSLLHFYI+DGDVPSAS
Sbjct: 61  SSHNHFTFTYALKACCFLHETQKGLEIHAHLIKSGHLSDIFLQNSLLHFYILDGDVPSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
           RIF S+PDPDV+SWTSIISGLSKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 121 RIFDSIPDPDVISWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLRS++EE+VSLDNALLDFYV+CG LRSAE LF +MP RDVVSWTT+IGGYA
Sbjct: 181 LGKAIHGLRLRSLNEENVSLDNALLDFYVRCGYLRSAEYLFDEMPKRDVVSWTTMIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           Q GLCEEAVR+FQNMV  GEA PNEATLINVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 241 QRGLCEEAVRVFQNMVHVGEAIPNEATLINVLSACSSISALHLGQWVHSYINSRHDVIID 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IFK +EH+DIIS ST+I+GLAMNGLG QAF LFSLMLV
Sbjct: 301 GNVGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTIISGLAMNGLGNQAFGLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HG+SPDDITFL LLS CSHG                                      LD
Sbjct: 361 HGISPDDITFLSLLSACSHGGLINQGLMVFEAMKDVYNISPQMRHYACMVDLYGKAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEG VWGALL+ACQIHGNEKKYEKV+EWL+   SKGVTVGT ALLSNT
Sbjct: 421 EAEAFIKEMPMEAEGSVWGALLHACQIHGNEKKYEKVKEWLL--GSKGVTVGTFALLSNT 480

[Close]

BLAST of Moc06g11420 vs. NCBI nr
Match: TYK18848.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 729.2 bits (1881), Expect = 3.8e-206
Identity = 376/502 (74.90%), Postives = 414/502 (82.47%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M LKP KPSISIAQ  QIHA+L+TNP P  FNP LG+ V SI+PENGLFLYNQML +P  
Sbjct: 106 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYP-- 165

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LHQT KGLEIH HL+KSGHLSDIFIQNSLLHFYI++GDV SAS
Sbjct: 166 SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSAS 225

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
            IF S+P+PDVVSWTSIISGLSKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 226 LIFDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLK 285

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLR+++EE+VSL+NALLDFYV+C  LRSAENLF KM  RDVVSWTT+IGGYA
Sbjct: 286 LGKAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYA 345

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVR+FQNMV  GEA PNEATL+NVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 346 QSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 405

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IF  +EH+DIIS STVI+GLAMNGLGKQAFVLFSLMLV
Sbjct: 406 GNVGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLV 465

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HG+SPDDITFLGLLS CSHG                                      LD
Sbjct: 466 HGISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLD 525

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEGPVWGALL+ACQIHGNEKKYEKVRE L+   SKGVTVG  ALLSNT
Sbjct: 526 EAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLL--GSKGVTVGAFALLSNT 585

[Close]

BLAST of Moc06g11420 vs. NCBI nr
Match: XP_008450427.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo] >XP_016900885.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo] >XP_016900886.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 727.6 bits (1877), Expect = 1.1e-205
Identity = 375/502 (74.70%), Postives = 412/502 (82.07%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M LKP KPSIS AQ  QIHA+L+TNP P  FNP LG+ V SI+PENGLFLYNQML +P  
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYP-- 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LHQT KGLEIH HL+KSGHLSDIFIQNSLLHFYI+ GDV SAS
Sbjct: 61  SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
            IF S+P+PDVVSWTSIISG SKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 121 LIFDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLR+++EE+VSL+NALLDFYV+C  LRSAENLF KM  RDVVSWTT+IGGYA
Sbjct: 181 LGKAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVR+FQNMV  GEA PNEATL+NVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 241 QSGLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IFK +EH+DIIS STVI+GLAMNGLGKQAFVLFSLMLV
Sbjct: 301 GNVGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HG+SPDDITFLGLLS CSHG                                      LD
Sbjct: 361 HGISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEGPVWGALL+ACQIHGNEKKYEKVRE L+   SKGVTVG  ALLSNT
Sbjct: 421 EAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLL--GSKGVTVGAFALLSNT 480

[Close]

BLAST of Moc06g11420 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.8e-76
Identity = 171/515 (33.20%), Postives = 269/515 (52.23%), Query Frame = 0


Query: 23  VTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTH 82
           +  PN L +N        S  P + L LY  M+        N YTF + LK+C+      
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI--SLGLLPNSYTFPFVLKSCAKSKAFK 153

Query: 83  KGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGD--------------------------- 142
           +G +IHGH++K G   D+++  SL+  Y+ +G                            
Sbjct: 154 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 213

Query: 143 ----VPSASRIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSM---NVRPNSATLVT 202
               + +A ++F  +P  DVVSW ++ISG ++ G  +EAL  F  M   NVRP+ +T+VT
Sbjct: 214 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 273

Query: 203 ALSACSSLGYLKLGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRD 262
            +SAC+  G ++LG+ +H          ++ + NAL+D Y KCG L +A  LF ++P +D
Sbjct: 274 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 333

Query: 263 VVSWTTIIGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIH 322
           V+SW T+IGGY    L +EA+ +FQ M++ GE  PN+ T++++L AC+ + A+++G+WIH
Sbjct: 334 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIH 393

Query: 323 SYIISRPDVILN-GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGL 382
            YI  R   + N  ++  +LI+MY KCG +E A ++F ++ H+ + S + +I G AM+G 
Sbjct: 394 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 453

Query: 383 GKQAFVLFSLMLVHGVSPDDITFLGLLSGCSHG--------------------------- 442
              +F LFS M   G+ PDDITF+GLLS CSH                            
Sbjct: 454 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 513

Query: 443 --LDFL------DEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSK 468
             +D L       EAE  +  M +E +G +W +LL AC++HGN +  E   E L++   +
Sbjct: 514 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 573

[Close]

BLAST of Moc06g11420 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.3e-71
Identity = 160/514 (31.13%), Postives = 256/514 (49.81%), Query Frame = 0


Query: 23  VTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSH-NHYTFTYALKACSSLHQT 82
           + NPN  ++N  +  F  S  P+    LY QMLRH    S  +H+T+    K C+ L  +
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172

Query: 83  HKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGL 142
             G  I GH++K        + N+ +H +   GD+ +A ++F   P  D+VSW  +I+G 
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232

Query: 143 SKLGFEEEALVKFLSM---NVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESV 202
            K+G  E+A+  +  M    V+P+  T++  +S+CS LG L  GK  +     +    ++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292

Query: 203 SLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYAQSGLCEEAVRIFQNM--- 262
            L NAL+D + KCG +  A  +F  +  R +VSWTT+I GYA+ GL + + ++F +M   
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352

Query: 263 ---------------------------VQEGEAEPNEATLINVLSACSSMSALNLGQWIH 322
                                      +Q    +P+E T+I+ LSACS + AL++G WIH
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412

Query: 323 SYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLG 382
            Y I +  + LN  +G +L++MY KCG++  A+ +F  ++ R+ ++ + +I GLA++G  
Sbjct: 413 RY-IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 472

Query: 383 KQAFVLFSLMLVHGVSPDDITFLGLLSGCSHG---------------------------- 442
             A   F+ M+  G++PD+ITF+GLLS C HG                            
Sbjct: 473 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 532

Query: 443 -------LDFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKG 468
                     L+EA+  M+ MP+EA+  VWGALL  C++HGN +  EK  + L+      
Sbjct: 533 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS- 592

[Close]

BLAST of Moc06g11420 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-69
Identity = 163/510 (31.96%), Postives = 256/510 (50.20%), Query Frame = 0


Query: 23  VTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTH 82
           +  PN   +N  + A+ +   P   ++ +  M+   S    N YTF + +KA + +    
Sbjct: 90  IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE-SQCYPNKYTFPFLIKAAAEVSSLS 149

Query: 83  KGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLS 142
            G  +HG  VKS   SD+F+ NSL+H Y   GD+ SA ++F ++ + DVVSW S+I+G  
Sbjct: 150 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 209

Query: 143 KLGFEEEALVKFLSM---NVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESVS 202
           + G  ++AL  F  M   +V+ +  T+V  LSAC+ +  L+ G+ +      +    +++
Sbjct: 210 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 269

Query: 203 LDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA------------------- 262
           L NA+LD Y KCGS+  A+ LF  M  +D V+WTT++ GYA                   
Sbjct: 270 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 329

Query: 263 ------------QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIH 322
                       Q+G   EA+ +F  +  +   + N+ TL++ LSAC+ + AL LG+WIH
Sbjct: 330 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 389

Query: 323 SYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLG 382
           SY I +  + +N ++ +ALI+MY KCG +E +  +F +VE RD+   S +I GLAM+G G
Sbjct: 390 SY-IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 449

Query: 383 KQAFVLFSLMLVHGVSPDDITFLGLLSGCSH-GL-------------------------- 442
            +A  +F  M    V P+ +TF  +   CSH GL                          
Sbjct: 450 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 509

Query: 443 --------DFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKG 464
                    +L++A  F++ MP+     VWGALL AC+IH N    E     L+    + 
Sbjct: 510 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR- 569

[Close]

BLAST of Moc06g11420 vs. ExPASy Swiss-Prot
Match: Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.7e-68
Identity = 159/477 (33.33%), Postives = 248/477 (51.99%), Query Frame = 0


Query: 30  NFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTHKGLEIHG 89
           ++N  L ++     P   +F Y   +   +  S + +TF    KAC       +G +IHG
Sbjct: 73  SYNTLLSSYAVCDKPRVTIFAYKTFV--SNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 132

Query: 90  HLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLSKLGFEEE 149
            + K G   DI++QNSL+HFY V G+  +A ++F  MP  DVVSWT II+G ++ G  +E
Sbjct: 133 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 192

Query: 150 ALVKFLSMNVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESVSLDNALLDFYV 209
           AL  F  M+V PN AT V  L +   +G L LGK IHGL L+     S+   NAL+D YV
Sbjct: 193 ALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 252

Query: 210 KCGSLRSAENLFVKMPNRDVVSWTTIIGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLI 269
           KC  L  A  +F ++  +D VSW ++I G       +EA+ +F  M      +P+   L 
Sbjct: 253 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT 312

Query: 270 NVLSACSSMSALNLGQWIHSYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEH 329
           +VLSAC+S+ A++ G+W+H YI++   +  + +IG A+++MY KCG +E A+ IF  +  
Sbjct: 313 SVLSACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 372

Query: 330 RDIISCSTVITGLAMNGLGKQAFVLFSLMLVHGVSPDDITFLGLLSGCSH-GL------- 389
           +++ + + ++ GLA++G G ++   F  M+  G  P+ +TFL  L+ C H GL       
Sbjct: 373 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRY 432

Query: 390 ----------------------------DFLDEAEAFMKEMPVEAEGPVWGALLNACQIH 449
                                         LDEA   +K MPV+ +  + GA+L+AC+  
Sbjct: 433 FHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNR 492

Query: 450 GN--EKKYEKVREWL-VRTRSKGVTVGTLALLSNTYASCDRWKDANEVRDTMRRRSL 468
           G   E   E +  +L +     GV V    LLSN +A+  RW D   +R  M+ + +
Sbjct: 493 GTLMELPKEILDSFLDIEFEDSGVYV----LLSNIFAANRRWDDVARIRRLMKVKGI 542

[Close]

BLAST of Moc06g11420 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.5e-67
Identity = 161/512 (31.45%), Postives = 247/512 (48.24%), Query Frame = 0


Query: 31  FNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTHKGLEIHGH 90
           +N  +  F      E  L  +  M  H      N Y+F   L ACS L+  +KG+++H  
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMM--HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 179

Query: 91  LVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLSKLGFEEEA 150
           + KS  LSD++I ++L+  Y   G+V  A R+F  M D +VVSW S+I+   + G   EA
Sbjct: 180 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 239

Query: 151 LVKF---LSMNVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVD-EESVSLDNALLD 210
           L  F   L   V P+  TL + +SAC+SL  +K+G+ +HG  +++      + L NA +D
Sbjct: 240 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 299

Query: 211 FYVKC-------------------------------GSLRSAENLFVKMPNRDVVSWTTI 270
            Y KC                                S ++A  +F KM  R+VVSW  +
Sbjct: 300 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 359

Query: 271 IGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRP 330
           I GY Q+G  EEA+ +F  + +E    P   +  N+L AC+ ++ L+LG   H +++   
Sbjct: 360 IAGYTQNGENEEALSLFCLLKRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHG 419

Query: 331 DVILNGN-----IGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQ 390
               +G      +GN+LI+MYVKCG +E    +F+ +  RD +S + +I G A NG G +
Sbjct: 420 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 479

Query: 391 AFVLFSLMLVHGVSPDDITFLGLLSGCSHG------------------------------ 450
           A  LF  ML  G  PD IT +G+LS C H                               
Sbjct: 480 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 539

Query: 451 -----LDFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVT 468
                  FL+EA++ ++EMP++ +  +WG+LL AC++H N    + V E L+        
Sbjct: 540 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPS--N 599

[Close]

BLAST of Moc06g11420 vs. ExPASy TrEMBL
Match: A0A6J1DJC1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021620 PE=4 SV=1)

HSP 1 Score: 904.4 bits (2336), Expect = 3.2e-259
Identity = 462/502 (92.03%), Postives = 462/502 (92.03%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS
Sbjct: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS
Sbjct: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
           RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK
Sbjct: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA
Sbjct: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN
Sbjct: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV
Sbjct: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HGVSPDDITFLGLLSGCSHG                                      LD
Sbjct: 361 HGVSPDDITFLGLLSGCSHGGLINQGLMVFKAMKDVYNVAPQMRHYGCMVDMYGRAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT
Sbjct: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 480

[Close]

BLAST of Moc06g11420 vs. ExPASy TrEMBL
Match: A0A0A0LXJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 8.0e-210
Identity = 378/502 (75.30%), Postives = 416/502 (82.87%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M LKP KPSISIAQ  QIHA+L+TNP P  FNP LG+ V SI PENGLFLYNQMLR+P  
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYP-- 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LHQT KGLEIH HL+KSGHLSDIFIQNSLLHFYI+DGDV SAS
Sbjct: 61  SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
            IF S+PDPDVVSWTSIISGLSKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 121 LIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLR+R+++EE+V L+NALLDFYV+C  LRSAENLF KMP RDVVSWTT+IGGYA
Sbjct: 181 LGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVR+FQNMV  GEA PNEATL+NVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 241 QSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IFK +EH+DI+S ST+I+GLAMNGLGKQAFVLFSLMLV
Sbjct: 301 GNVGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HGVSPDDITFLGLLS CSHG                                      LD
Sbjct: 361 HGVSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEGPVWGALL+ACQ+HGNEKKYEKVREWL+   SKGVTVGT ALLSNT
Sbjct: 421 EAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLL--GSKGVTVGTFALLSNT 480

[Close]

BLAST of Moc06g11420 vs. ExPASy TrEMBL
Match: A0A5D3D5L6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00410 PE=4 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 1.8e-206
Identity = 376/502 (74.90%), Postives = 414/502 (82.47%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M LKP KPSISIAQ  QIHA+L+TNP P  FNP LG+ V SI+PENGLFLYNQML +P  
Sbjct: 106 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYP-- 165

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LHQT KGLEIH HL+KSGHLSDIFIQNSLLHFYI++GDV SAS
Sbjct: 166 SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSAS 225

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
            IF S+P+PDVVSWTSIISGLSKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 226 LIFDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLK 285

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLR+++EE+VSL+NALLDFYV+C  LRSAENLF KM  RDVVSWTT+IGGYA
Sbjct: 286 LGKAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYA 345

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVR+FQNMV  GEA PNEATL+NVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 346 QSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 405

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IF  +EH+DIIS STVI+GLAMNGLGKQAFVLFSLMLV
Sbjct: 406 GNVGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLV 465

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HG+SPDDITFLGLLS CSHG                                      LD
Sbjct: 466 HGISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLD 525

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEGPVWGALL+ACQIHGNEKKYEKVRE L+   SKGVTVG  ALLSNT
Sbjct: 526 EAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLL--GSKGVTVGAFALLSNT 585

[Close]

BLAST of Moc06g11420 vs. ExPASy TrEMBL
Match: A0A1S4DY27 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492035 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 5.3e-206
Identity = 375/502 (74.70%), Postives = 412/502 (82.07%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M LKP KPSIS AQ  QIHA+L+TNP P  FNP LG+ V SI+PENGLFLYNQML +P  
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYP-- 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNH+TFTYALKAC  LHQT KGLEIH HL+KSGHLSDIFIQNSLLHFYI+ GDV SAS
Sbjct: 61  SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
            IF S+P+PDVVSWTSIISG SKLGFE+EAL KFLSMNVRPNS TLVTALSACSSL  LK
Sbjct: 121 LIFDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           LGKAIHGLRLR+++EE+VSL+NALLDFYV+C  LRSAENLF KM  RDVVSWTT+IGGYA
Sbjct: 181 LGKAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
           QSGLCEEAVR+FQNMV  GEA PNEATL+NVLSACSS+SAL+LGQW+HSYI SR DVI++
Sbjct: 241 QSGLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GN+GNALINMYVKCG+MEMA+ IFK +EH+DIIS STVI+GLAMNGLGKQAFVLFSLMLV
Sbjct: 301 GNVGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HG+SPDDITFLGLLS CSHG                                      LD
Sbjct: 361 HGISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMP+EAEGPVWGALL+ACQIHGNEKKYEKVRE L+   SKGVTVG  ALLSNT
Sbjct: 421 EAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLL--GSKGVTVGAFALLSNT 480

[Close]

BLAST of Moc06g11420 vs. ExPASy TrEMBL
Match: A0A6J1H7Z9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461372 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 2.0e-205
Identity = 373/502 (74.30%), Postives = 413/502 (82.27%), Query Frame = 0


Query: 1   MLLKPRKPSISIAQLAQIHAQLVTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSS 60
           M  +P K  IS AQL+QIHAQL+TNP P  FNP LGA V S+APENGLFLYNQMLRHP  
Sbjct: 1   MPFRPPKLWISSAQLSQIHAQLLTNPKPRVFNPLLGALVDSVAPENGLFLYNQMLRHP-- 60

Query: 61  SSHNHYTFTYALKACSSLHQTHKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120
           SSHNHYTFTYALKAC  LH+THKGLEIH  L+KSGHLSDIFIQNSLLHFYIVDGDVPSAS
Sbjct: 61  SSHNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSAS 120

Query: 121 RIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSMNVRPNSATLVTALSACSSLGYLK 180
           R+F S+PDPDVVSWTSIISGLSKLGF+EEAL KFLSMNV PNSATLV+ALSACSSL  +K
Sbjct: 121 RVFDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVK 180

Query: 181 LGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA 240
           +GKAIHGL+LRS++EESV+LDNALLDFYV+CGSLR A+NLF +MP RDVVSWTT+IGGYA
Sbjct: 181 IGKAIHGLKLRSLNEESVNLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYA 240

Query: 241 QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRPDVILN 300
            +GLCEEAVR+FQNMV   EA PNEATLINVLSACSSMSAL+LGQW+HSYI SR DVI++
Sbjct: 241 LTGLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHLGQWVHSYINSRHDVIID 300

Query: 301 GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQAFVLFSLMLV 360
           GNIGNALINMYVKCGSM+ A+ IFKTVEH+DIIS ST+I+GLAMNG GKQAF LFSLMLV
Sbjct: 301 GNIGNALINMYVKCGSMDKAISIFKTVEHKDIISWSTIISGLAMNGQGKQAFGLFSLMLV 360

Query: 361 HGVSPDDITFLGLLSGCSHG-----------------------------------LDFLD 420
           HG++PD ITFL LLS CSHG                                      LD
Sbjct: 361 HGITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRHYACMVDMYGKAGLLD 420

Query: 421 EAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVTVGTLALLSNT 468
           EAEAF+KEMPVEAEGPVWGALL+ACQ+HGNE +YEKVR+WL+   SK +TVGT ALLSNT
Sbjct: 421 EAEAFIKEMPVEAEGPVWGALLHACQLHGNE-RYEKVRQWLL--SSKSITVGTYALLSNT 480

[Close]

BLAST of Moc06g11420 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 287.7 bits (735), Expect = 2.7e-77
Identity = 171/515 (33.20%), Postives = 269/515 (52.23%), Query Frame = 0


Query: 23  VTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTH 82
           +  PN L +N        S  P + L LY  M+        N YTF + LK+C+      
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI--SLGLLPNSYTFPFVLKSCAKSKAFK 153

Query: 83  KGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGD--------------------------- 142
           +G +IHGH++K G   D+++  SL+  Y+ +G                            
Sbjct: 154 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 213

Query: 143 ----VPSASRIFASMPDPDVVSWTSIISGLSKLGFEEEALVKFLSM---NVRPNSATLVT 202
               + +A ++F  +P  DVVSW ++ISG ++ G  +EAL  F  M   NVRP+ +T+VT
Sbjct: 214 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 273

Query: 203 ALSACSSLGYLKLGKAIHGLRLRSVDEESVSLDNALLDFYVKCGSLRSAENLFVKMPNRD 262
            +SAC+  G ++LG+ +H          ++ + NAL+D Y KCG L +A  LF ++P +D
Sbjct: 274 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 333

Query: 263 VVSWTTIIGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIH 322
           V+SW T+IGGY    L +EA+ +FQ M++ GE  PN+ T++++L AC+ + A+++G+WIH
Sbjct: 334 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIH 393

Query: 323 SYIISRPDVILN-GNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGL 382
            YI  R   + N  ++  +LI+MY KCG +E A ++F ++ H+ + S + +I G AM+G 
Sbjct: 394 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 453

Query: 383 GKQAFVLFSLMLVHGVSPDDITFLGLLSGCSHG--------------------------- 442
              +F LFS M   G+ PDDITF+GLLS CSH                            
Sbjct: 454 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 513

Query: 443 --LDFL------DEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSK 468
             +D L       EAE  +  M +E +G +W +LL AC++HGN +  E   E L++   +
Sbjct: 514 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 573

[Close]

BLAST of Moc06g11420 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 272.7 bits (696), Expect = 9.0e-73
Identity = 160/514 (31.13%), Postives = 256/514 (49.81%), Query Frame = 0


Query: 23  VTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSH-NHYTFTYALKACSSLHQT 82
           + NPN  ++N  +  F  S  P+    LY QMLRH    S  +H+T+    K C+ L  +
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172

Query: 83  HKGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGL 142
             G  I GH++K        + N+ +H +   GD+ +A ++F   P  D+VSW  +I+G 
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232

Query: 143 SKLGFEEEALVKFLSM---NVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESV 202
            K+G  E+A+  +  M    V+P+  T++  +S+CS LG L  GK  +     +    ++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292

Query: 203 SLDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYAQSGLCEEAVRIFQNM--- 262
            L NAL+D + KCG +  A  +F  +  R +VSWTT+I GYA+ GL + + ++F +M   
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352

Query: 263 ---------------------------VQEGEAEPNEATLINVLSACSSMSALNLGQWIH 322
                                      +Q    +P+E T+I+ LSACS + AL++G WIH
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412

Query: 323 SYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLG 382
            Y I +  + LN  +G +L++MY KCG++  A+ +F  ++ R+ ++ + +I GLA++G  
Sbjct: 413 RY-IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 472

Query: 383 KQAFVLFSLMLVHGVSPDDITFLGLLSGCSHG---------------------------- 442
             A   F+ M+  G++PD+ITF+GLLS C HG                            
Sbjct: 473 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 532

Query: 443 -------LDFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKG 468
                     L+EA+  M+ MP+EA+  VWGALL  C++HGN +  EK  + L+      
Sbjct: 533 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS- 592

[Close]

BLAST of Moc06g11420 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-70
Identity = 163/510 (31.96%), Postives = 256/510 (50.20%), Query Frame = 0


Query: 23  VTNPNPLNFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTH 82
           +  PN   +N  + A+ +   P   ++ +  M+   S    N YTF + +KA + +    
Sbjct: 90  IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE-SQCYPNKYTFPFLIKAAAEVSSLS 149

Query: 83  KGLEIHGHLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLS 142
            G  +HG  VKS   SD+F+ NSL+H Y   GD+ SA ++F ++ + DVVSW S+I+G  
Sbjct: 150 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 209

Query: 143 KLGFEEEALVKFLSM---NVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESVS 202
           + G  ++AL  F  M   +V+ +  T+V  LSAC+ +  L+ G+ +      +    +++
Sbjct: 210 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 269

Query: 203 LDNALLDFYVKCGSLRSAENLFVKMPNRDVVSWTTIIGGYA------------------- 262
           L NA+LD Y KCGS+  A+ LF  M  +D V+WTT++ GYA                   
Sbjct: 270 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 329

Query: 263 ------------QSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIH 322
                       Q+G   EA+ +F  +  +   + N+ TL++ LSAC+ + AL LG+WIH
Sbjct: 330 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 389

Query: 323 SYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLG 382
           SY I +  + +N ++ +ALI+MY KCG +E +  +F +VE RD+   S +I GLAM+G G
Sbjct: 390 SY-IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 449

Query: 383 KQAFVLFSLMLVHGVSPDDITFLGLLSGCSH-GL-------------------------- 442
            +A  +F  M    V P+ +TF  +   CSH GL                          
Sbjct: 450 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 509

Query: 443 --------DFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKG 464
                    +L++A  F++ MP+     VWGALL AC+IH N    E     L+    + 
Sbjct: 510 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR- 569

[Close]

BLAST of Moc06g11420 vs. TAIR 10
Match: AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-69
Identity = 159/477 (33.33%), Postives = 248/477 (51.99%), Query Frame = 0


Query: 30  NFNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTHKGLEIHG 89
           ++N  L ++     P   +F Y   +   +  S + +TF    KAC       +G +IHG
Sbjct: 73  SYNTLLSSYAVCDKPRVTIFAYKTFV--SNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 132

Query: 90  HLVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLSKLGFEEE 149
            + K G   DI++QNSL+HFY V G+  +A ++F  MP  DVVSWT II+G ++ G  +E
Sbjct: 133 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 192

Query: 150 ALVKFLSMNVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVDEESVSLDNALLDFYV 209
           AL  F  M+V PN AT V  L +   +G L LGK IHGL L+     S+   NAL+D YV
Sbjct: 193 ALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 252

Query: 210 KCGSLRSAENLFVKMPNRDVVSWTTIIGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLI 269
           KC  L  A  +F ++  +D VSW ++I G       +EA+ +F  M      +P+   L 
Sbjct: 253 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT 312

Query: 270 NVLSACSSMSALNLGQWIHSYIISRPDVILNGNIGNALINMYVKCGSMEMAVRIFKTVEH 329
           +VLSAC+S+ A++ G+W+H YI++   +  + +IG A+++MY KCG +E A+ IF  +  
Sbjct: 313 SVLSACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 372

Query: 330 RDIISCSTVITGLAMNGLGKQAFVLFSLMLVHGVSPDDITFLGLLSGCSH-GL------- 389
           +++ + + ++ GLA++G G ++   F  M+  G  P+ +TFL  L+ C H GL       
Sbjct: 373 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRY 432

Query: 390 ----------------------------DFLDEAEAFMKEMPVEAEGPVWGALLNACQIH 449
                                         LDEA   +K MPV+ +  + GA+L+AC+  
Sbjct: 433 FHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNR 492

Query: 450 GN--EKKYEKVREWL-VRTRSKGVTVGTLALLSNTYASCDRWKDANEVRDTMRRRSL 468
           G   E   E +  +L +     GV V    LLSN +A+  RW D   +R  M+ + +
Sbjct: 493 GTLMELPKEILDSFLDIEFEDSGVYV----LLSNIFAANRRWDDVARIRRLMKVKGI 542

[Close]

BLAST of Moc06g11420 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 258.5 bits (659), Expect = 1.8e-68
Identity = 161/512 (31.45%), Postives = 247/512 (48.24%), Query Frame = 0


Query: 31  FNPFLGAFVASIAPENGLFLYNQMLRHPSSSSHNHYTFTYALKACSSLHQTHKGLEIHGH 90
           +N  +  F      E  L  +  M  H      N Y+F   L ACS L+  +KG+++H  
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMM--HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 179

Query: 91  LVKSGHLSDIFIQNSLLHFYIVDGDVPSASRIFASMPDPDVVSWTSIISGLSKLGFEEEA 150
           + KS  LSD++I ++L+  Y   G+V  A R+F  M D +VVSW S+I+   + G   EA
Sbjct: 180 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 239

Query: 151 LVKF---LSMNVRPNSATLVTALSACSSLGYLKLGKAIHGLRLRSVD-EESVSLDNALLD 210
           L  F   L   V P+  TL + +SAC+SL  +K+G+ +HG  +++      + L NA +D
Sbjct: 240 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 299

Query: 211 FYVKC-------------------------------GSLRSAENLFVKMPNRDVVSWTTI 270
            Y KC                                S ++A  +F KM  R+VVSW  +
Sbjct: 300 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 359

Query: 271 IGGYAQSGLCEEAVRIFQNMVQEGEAEPNEATLINVLSACSSMSALNLGQWIHSYIISRP 330
           I GY Q+G  EEA+ +F  + +E    P   +  N+L AC+ ++ L+LG   H +++   
Sbjct: 360 IAGYTQNGENEEALSLFCLLKRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHG 419

Query: 331 DVILNGN-----IGNALINMYVKCGSMEMAVRIFKTVEHRDIISCSTVITGLAMNGLGKQ 390
               +G      +GN+LI+MYVKCG +E    +F+ +  RD +S + +I G A NG G +
Sbjct: 420 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 479

Query: 391 AFVLFSLMLVHGVSPDDITFLGLLSGCSHG------------------------------ 450
           A  LF  ML  G  PD IT +G+LS C H                               
Sbjct: 480 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 539

Query: 451 -----LDFLDEAEAFMKEMPVEAEGPVWGALLNACQIHGNEKKYEKVREWLVRTRSKGVT 468
                  FL+EA++ ++EMP++ +  +WG+LL AC++H N    + V E L+        
Sbjct: 540 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPS--N 599

The following BLAST results are available for this feature:

BLAST of Moc06g11420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154335.1	6.6e-259	92.03	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momor...	[more]
XP_011660133.1	1.6e-209	75.30	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ...	[more]
XP_038878297.1	2.8e-209	75.10	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin...	[more]
TYK18848.1	3.8e-206	74.90	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008450427.1	1.1e-205	74.70	PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-...	[more]

BLAST of Moc06g11420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	3.8e-76	33.20	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SJZ3	1.3e-71	31.13	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
O82380	2.0e-69	31.96	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9SZK1	1.7e-68	33.33	Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	2.5e-67	31.45	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of Moc06g11420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJC1	3.2e-259	92.03	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Mom...	[more]
A0A0A0LXJ1	8.0e-210	75.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1	[more]
A0A5D3D5L6	1.8e-206	74.90	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DY27	5.3e-206	74.70	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A6J1H7Z9	2.0e-205	74.30	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]

BLAST of Moc06g11420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	2.7e-77	33.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22410.1	9.0e-73	31.13	SLOW GROWTH 1	[more]
AT2G29760.1	1.4e-70	31.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G38010.1	1.2e-69	33.33	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G13600.1	1.8e-68	31.45	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 289..402 e-value: 3.0E-18 score: 68.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 199..288 e-value: 4.0E-17 score: 64.6 coord: 31..198 e-value: 2.4E-22 score: 81.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 227..275 e-value: 1.9E-8 score: 34.4 coord: 331..378 e-value: 4.0E-8 score: 33.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 333..366 e-value: 1.7E-4 score: 19.5 coord: 230..260 e-value: 1.6E-5 score: 22.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 305..326 e-value: 0.0056 score: 16.9 coord: 132..157 e-value: 0.0056 score: 16.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 228..262 score: 10.950397
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 9.328124
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 179..379 coord: 46..277 coord: 384..467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g11420.1	Moc06g11420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding