Moc06g10900 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g10900
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr6: 8260548 .. 8264853 (-)
RNA-Seq Expression	Moc06g10900
Synteny	Moc06g10900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCCATCCCTTTATAACACCTTTTAGTTGGTTTGTTGTTGAATTAGCAATCATCAATGCATGGAAGACAGGTGGAGGGGCTTGGGGAAGCTTCAAAACACACAAAAACTTGCGTTTTACATTAAGGACATTCTCGGAATTGGGAAAGTCGTCGGGCGCCCAGCTCGGTATTTTTCTACAAAAAATTGTAATTTTCGTTAGAGATCAACTCTAAATGATGTAAAAACGTCCTATATGCATGTATAACCTAAGATAACTCCAAATGAAAGGTTTTGGACACTAAACCAAGCTTAAAACACAGATTCTAAGTGTAAAACAGTAGAAAACAGCACCTAATTAGTTCCTTTTTACTCTTATAAACAAGGGGAATCACACCCCCAAACTTGGCTTTTTGCTTGTCCCCAGGCAAATTCAACAAAAAAATATATCTCTTAAATCATATGCAACAACCATAAGCAACATTGAACATAAGGATAGACACTAGACTTGTTTTTCATATGGTGCCTCAGGAAAGATCATCAAAACCTTGTCGTCTCCCTATCTTCAACAGCCAACTTACCATAAGCCAACAAAGTTCAAAACAATAAAAAGTTTCTTAAAAATCTTTCCCTATTTCAAAACATGAAAACTTTTTAACAATGTTAAAGAATATGCACGCTCCCTTTTTTCACCTAAGACTTTTACAATAAAAGGAATGACTACTAGCCTCCGTGGAGATTTCCTCCACATCTTTGTAGAGACCTTTCAAGTAACAACCAGTCATAACATATCTACGGTGGGTTGCACGATGTTATACTAGACCCAATTGCTACCCTCGAATCTGCTTACGCCACTCGACCTAAGCTATAATGTGTGTCTACAATGATAAAAATAAAGACATTTTCTTGCCACTCTTTTTTCCTTCCTCTATTCTTTTTCTCTCACAATTTAAATCTTTTCCCCACTCTCTTTTTTTTCCTCACAAGGAATGAAGACTCTTTTTGTTTGCAAACTTTTTTTTCTTTTTTTTTCCGACTCTTTTTCTACTTTTTTTTTTTCTTGCAAAGACTCTTTTTATATTCATTTTTTTTATTTGACTCTTTTTTGCAAAAATAATAGCATGTTCTTTCAAGAATGGAAAGTAGCATTTTCTTTCTAAAAAAATGAAGGACTATCCCCAAACTTAAGAGAGACAGTGTCCTCACTGGAAAAATTTTTTTGAAGAGGTAACACAAGTAAAAAATACTGCCACACAGTCCAACAATGGAAGCCATATCAGTCAAACAGCTCAACAAGGATAACACAATTTACAGCTCACAGATAACAACATTCTCATGGACAACAGCAATCACAACATTCATTCAAGATTCCATATACCATAAATGCCTTGAATTATGTTGTAGAATGAATACTCCCATCGGCTATGAATATTTGGTTTTATCCCTAATTGTAGCAATTACCTTGATTTCATTTTATAATCTTTCCTTGTATAATTATGGATTGTACTAATTATGTTATATGTTCCAATCAGACCAAGATTCTTGGATCTGGATTGAACATATTCAGTCGCTCTGCATTTTTCTTTAAAACAGAAACAGTAGCTTGTAATTTCTCAATTTGATTTTCTGCAATTATACAGAAGAATACATGAGAATCTCATTTCAATTTTATCACTTTTTGTTCTAATCCAAGCTCAATTCTGTTTATGCTATCAGAGCTTGTGCAGAAAGAAGTCTGAAAATTTCTCTTTTGAATCTATCTCTTCTCTAATCCTTCTCTTCCTTGCATCTGTCATGTCTAAGCAAGAAACACCTCTCACGATCCAATCATTCCATCAGTGTGCAAGTTTGATATCCATCAAACTCAATTCAAGCAATTATTTACTGTGGAAATCTCAGGTTTTGCCCTTAAATCAAAACACTTGGCTTGCAACATCATCTCAATGGGGAAGCTCCAAAGGCAGAGGACTCAACAAGCAAGGAAGAAAATGCACAAAATTGACCTTCAAACCAGTACATGGACCAACAATGATGGCCTCTTGACTTCTTGGTTACTTGGAATCATTGATGAAGATGTGCTAGCTCTAATTGAAGGTACTGAAACTGCAAAACAAGTATAGAATTCTCTTCAGAATATTCTCTTAACCATGACAAAGGAGAATGAAATACATCTAAATGAAGCCTTGCTTACTTTAAAAAGAGGTACCATGTCTATAGATGAATACATAAGGAAATTTAAAGGCTTATGTGACAAACTAGCAGCTGTGAGAAAGCCCCTAGATGATGTAACCAAGGTGTTTCACTTAGCAAGAGGATTAGGATGCAAGTACAAAGAATTCAAGATTGCTATGCTAACCAAAGCTCCATATCCTACTTACAATGAGTTTATTCTTGCTTTAAAGACACATCAACAGCTTGTGCTCAATGATGAGGAAGAAGAAAAGAGCAACCAAATCAACCTCAACCAAGCCTTTTACTCAAACCATGGAAGAAGTAGAGGAAAGGGAAGACAATTCTCTTCAAGAGGGAGAGGGTTTTATCACAGCAAACAACAGCACCAAAACAATATTTATCAGCAAGGTAATTCTTTGAAAAACAAGAAAATTTCTAATGTTCAATGTAGCAGCAGTGAATCTCAGGAGCCTAGCTTTGTAAGGAGGACAACATGCCAAATTTGTGGGAAGAACAACCATACAACTTTGGAGTGTTGGAATCGCTTTGACCATGCCTATCAAACGGAGGAAATACCAGAAGCTCAAGTTGTAATCGCTTTGACCATGCCTATCAAACGGAGGAAATACTAGAAGCTCCAGCTGCACTCACCTTAAATGAAGTTAATGATACCAACGTGTATGCAGACTCAGGGGCAATGACTCACATTGTAAACAACCCAAGTACAATTCTATCTAAACACATATACAAGGGTCATGATAAACTATATGTAGGTAATGGTCAAGGTCTTCACATCACACACACTGGGGATACCTAACTTTCTCTTAAGAATGTGTTAATTGTTCCTGAAATAAAAAAAAAAAAATTTGTTGTCCATTAGTAGAATAACTAAAGATAATAATTGTAGTGTCTCCTTCTTTGCTAACAAATTTGTTATTAAGGATCAACAGGGTCGAGTTCTAGCTAAAGGATATGAAAACAAGGGCTGTACAGTCTTGAAACTACCAAAGACAGTCAAACTGCTTTGGCAACATTCACAGACAATGTTGTAGCTGAGTTATCTTTATCTACTGCTTTAGTTACCAATAAAGCCTCATGTTTTGTATGGCATAGAAGGATGGGTCACCTTAATGACCGTGTTTTGAAAATTCTTGCAAATAAACAGATTATTAATGTATAAGTTGGAAAAAAGAGCAACAAGTGTGCACTAGCTGTCAACTTGGTAAAAATTGTAAGCTTCCTTTCCAATTGAATGAGAATCATGCTTCCAAACCTCTAGATAAAGTGCATTGTGACCTTTGGGGTCAGCTCCTATTGCTTCTTGTCAACTTTTTAAATATTATGTTAGTTTTATAGATGATTATTCTAGATACGTTTGGATCTATCCCTTAAGAAGAAAATCAGATTTCTTAAACACCTTCATCAAGTTTCAATTATTAGTCGAAAATCAACTTGAAAGGAAAATAAAAGTGTTTCAAAGTGATGGTGGAGAGTTTACATCGAAAACTTTCAAACTTCTATTAGACCAAAAAGGAATACATCACCAATTTTCTTGCCCTTACACCCCCTCAACAAAATGGGGTTGTTGAGCGGAAACATAGGCATATTGTGGAAACAGGTCTTTCTCTCTTATTTAAATCTCACATGCCTTTAAAATATTGGGTAGATGCCTTCCTCACCGCCTCATTTCTCATAAATCGAATGCCTTCAAACGTCATAGGCATGTTGTCTCCCTTTGAAGAAATAAATGGAAAACCACCCAACTACAATAACATAAGGCTATTTGGTTGTAAGTGTTTTCCATATCTTAGAAACACTCCTAAGACCAATAAGTTCTCAAAAGGAACTTATCCTTGCATTTTTGTTGGGTATAGCATGGAACATAAAGGATATCGATGTCTTGGCTTTGAGAACAATAGAATTTACATCTCAAGACACGTGGTTTTTTATGAAAATTATTTTCCCTTTGATAAAGTAGTTGCTAACAGCACCACCAAAAGTGCAAGTTTCCTTGAGGTTACTGATTTTGCAGGTATTCAAAAGAAGAACATGAATGGTTCTCTGACAAGTACTCCAAGCAAGAATAAAGATATACCAAGCAAGAACATAGTTTTTGATGGGGAGAACACACTGAAACTTCACAATACTTAA

mRNA sequence

ATGGAGAGCCATCCCTTTATAACACCTTTTAGTTGGTTTGTTGTTGAATTAGCAATCATCAATGCATGGAAGACAGGTGGAGGGGCTTGGGGAAGCTTCAAAACACACAAAAACTTGCGTTTTACATTAAGGACATTCTCGGAATTGGGAAAGTCGTCGGGCGCCCAGCTCGGTTTTGCCCTTAAATCAAAACACTTGGCTTGCAACATCATCTCAATGGGGAAGCTCCAAAGGCAGAGGACTCAACAAGCAAGGAAGAAAATGCACAAAATTGACCTTCAAACCAGTACATGGACCAACAATGATGGCCTCTTGACTTCTTGGTTACTTGGAATCATTGATGAAGATGTGCTAGCTCTAATTGAAGATGAATACATAAGGAAATTTAAAGGCTTATGTGACAAACTAGCAGCTGTGAGAAAGCCCCTAGATGATGTAACCAAGGTGTTTCACTTAGCAAGAGGATTAGGATGCAAGTACAAAGAATTCAAGATTGCTATGCTAACCAAAGCTCCATATCCTACTTACAATGAGTTTATTCTTGCTTTAAAGACACATCAACAGCTTGTGCTCAATGATGAGGAAGAAGAAAAGAGCAACCAAATCAACCTCAACCAAGCCTTTTACTCAAACCATGGAAGAAGTAGAGGAAAGGGAAGACAATTCTCTTCAAGAGGGAGAGGGTTTTATCACAGCAAACAACAGCACCAAAACAATATTTATCAGCAAGGTATTCAAAAGAAGAACATGAATGGTTCTCTGACAAGTACTCCAAGCAAGAATAAAGATATACCAAGCAAGAACATAGTTTTTGATGGGGAGAACACACTGAAACTTCACAATACTTAA

Coding sequence (CDS)

ATGGAGAGCCATCCCTTTATAACACCTTTTAGTTGGTTTGTTGTTGAATTAGCAATCATCAATGCATGGAAGACAGGTGGAGGGGCTTGGGGAAGCTTCAAAACACACAAAAACTTGCGTTTTACATTAAGGACATTCTCGGAATTGGGAAAGTCGTCGGGCGCCCAGCTCGGTTTTGCCCTTAAATCAAAACACTTGGCTTGCAACATCATCTCAATGGGGAAGCTCCAAAGGCAGAGGACTCAACAAGCAAGGAAGAAAATGCACAAAATTGACCTTCAAACCAGTACATGGACCAACAATGATGGCCTCTTGACTTCTTGGTTACTTGGAATCATTGATGAAGATGTGCTAGCTCTAATTGAAGATGAATACATAAGGAAATTTAAAGGCTTATGTGACAAACTAGCAGCTGTGAGAAAGCCCCTAGATGATGTAACCAAGGTGTTTCACTTAGCAAGAGGATTAGGATGCAAGTACAAAGAATTCAAGATTGCTATGCTAACCAAAGCTCCATATCCTACTTACAATGAGTTTATTCTTGCTTTAAAGACACATCAACAGCTTGTGCTCAATGATGAGGAAGAAGAAAAGAGCAACCAAATCAACCTCAACCAAGCCTTTTACTCAAACCATGGAAGAAGTAGAGGAAAGGGAAGACAATTCTCTTCAAGAGGGAGAGGGTTTTATCACAGCAAACAACAGCACCAAAACAATATTTATCAGCAAGGTATTCAAAAGAAGAACATGAATGGTTCTCTGACAAGTACTCCAAGCAAGAATAAAGATATACCAAGCAAGAACATAGTTTTTGATGGGGAGAACACACTGAAACTTCACAATACTTAA

Protein sequence

MESHPFITPFSWFVVELAIINAWKTGGGAWGSFKTHKNLRFTLRTFSELGKSSGAQLGFALKSKHLACNIISMGKLQRQRTQQARKKMHKIDLQTSTWTNNDGLLTSWLLGIIDEDVLALIEDEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTKAPYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFYHSKQQHQNNIYQQGIQKKNMNGSLTSTPSKNKDIPSKNIVFDGENTLKLHNT

Homology

[Close]

BLAST of Moc06g10900 vs. NCBI nr
Match: XP_022154021.1 (uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncharacterized protein LOC111021379 [Momordica charantia])

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-51
Identity = 115/201 (57.21%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 94  QTSTWTNNDGLLTSWLLGIIDEDVLALIE------------------------------- 153
           Q  TW NNDGLLTSWLLGII EDVL L+E                               
Sbjct: 71  QVRTWINNDGLLTSWLLGIIAEDVLTLLEGTETAKEVWHSLEELLLTMTKENEIHLNEAL 130

Query: 154 ----------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTKAP 213
                     DEYIRKFK LCD+L A++KPLDD+TKVFHLARGLG KYK+F+ AML+KAP
Sbjct: 131 LTLKKGSLSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKDFRTAMLSKAP 190

Query: 214 YPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFYHS 254
           YP+YN+F+LALK H Q  L DEEEE+S+Q+NLNQAF+SN GRSRG+GRQFSSRGRGFYHS
Sbjct: 191 YPSYNQFVLALKAHDQF-LTDEEEERSSQVNLNQAFFSNRGRSRGRGRQFSSRGRGFYHS 250

[Close]

BLAST of Moc06g10900 vs. NCBI nr
Match: RVW19921.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-32
Identity = 82/203 (40.39%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 83  DQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTKEKEVQLTN 142

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ KVF LA+GLG KY +F++AML+K
Sbjct: 143 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSK 202

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 254
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  QA+++  GR R +G +F SRGRGF 
Sbjct: 203 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQAYFTQRGRGRNQGGRFLSRGRGFT 262

[Close]

BLAST of Moc06g10900 vs. NCBI nr
Match: RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-32
Identity = 88/221 (39.82%), Postives = 128/221 (57.92%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 114 DQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTKEKEVQLTN 173

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ KVF LA+GLG KY +F++AML+K
Sbjct: 174 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSK 233

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 270
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  QA+++  GR R +G +F SRGRGF 
Sbjct: 234 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQAYFTQRGRGRNRGGRFLSRGRGFT 293

[Close]

BLAST of Moc06g10900 vs. NCBI nr
Match: CAN74381.1 (hypothetical protein VITISV_007944 [Vitis vinifera])

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-31
Identity = 87/221 (39.37%), Postives = 127/221 (57.47%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 69  DQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTKEKEVQLTN 128

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ K F LA+GLG KY +F++AML+K
Sbjct: 129 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKXFQLAQGLGTKYMDFRVAMLSK 188

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 270
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  QA+++  GR R +G +F SRGRGF 
Sbjct: 189 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQAYFTQRGRGRNRGGRFLSRGRGFT 248

[Close]

BLAST of Moc06g10900 vs. NCBI nr
Match: RVW82530.1 (hypothetical protein CK203_046287 [Vitis vinifera])

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-31
Identity = 87/221 (39.37%), Postives = 127/221 (57.47%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 86  DHSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTKTAYDVWNSLGEKLLPMTKEKEVQLTN 145

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ KVF LA+GLG KY +F++AML+K
Sbjct: 146 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSK 205

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 270
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  Q +++  GR R +G +F SRGRGF 
Sbjct: 206 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQTYFTQRGRGRNQGGRFLSRGRGFT 265

[Close]

BLAST of Moc06g10900 vs. ExPASy TrEMBL
Match: A0A6J1DMG5 (uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021379 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 5.5e-52
Identity = 115/201 (57.21%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 94  QTSTWTNNDGLLTSWLLGIIDEDVLALIE------------------------------- 153
           Q  TW NNDGLLTSWLLGII EDVL L+E                               
Sbjct: 71  QVRTWINNDGLLTSWLLGIIAEDVLTLLEGTETAKEVWHSLEELLLTMTKENEIHLNEAL 130

Query: 154 ----------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTKAP 213
                     DEYIRKFK LCD+L A++KPLDD+TKVFHLARGLG KYK+F+ AML+KAP
Sbjct: 131 LTLKKGSLSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKDFRTAMLSKAP 190

Query: 214 YPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFYHS 254
           YP+YN+F+LALK H Q  L DEEEE+S+Q+NLNQAF+SN GRSRG+GRQFSSRGRGFYHS
Sbjct: 191 YPSYNQFVLALKAHDQF-LTDEEEERSSQVNLNQAFFSNRGRSRGRGRQFSSRGRGFYHS 250

[Close]

BLAST of Moc06g10900 vs. ExPASy TrEMBL
Match: A0A438C9J9 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1040 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-32
Identity = 82/203 (40.39%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 83  DQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTKEKEVQLTN 142

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ KVF LA+GLG KY +F++AML+K
Sbjct: 143 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSK 202

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 254
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  QA+++  GR R +G +F SRGRGF 
Sbjct: 203 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQAYFTQRGRGRNQGGRFLSRGRGFT 262

[Close]

BLAST of Moc06g10900 vs. ExPASy TrEMBL
Match: A0A438E6Z5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1575 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-32
Identity = 88/221 (39.82%), Postives = 128/221 (57.92%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 114 DQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTKEKEVQLTN 173

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ KVF LA+GLG KY +F++AML+K
Sbjct: 174 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSK 233

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 270
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  QA+++  GR R +G +F SRGRGF 
Sbjct: 234 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQAYFTQRGRGRNRGGRFLSRGRGFT 293

[Close]

BLAST of Moc06g10900 vs. ExPASy TrEMBL
Match: A0A438HDK5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_046287 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 87/221 (39.37%), Postives = 127/221 (57.47%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 86  DHSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTKTAYDVWNSLGEKLLPMTKEKEVQLTN 145

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ KVF LA+GLG KY +F++AML+K
Sbjct: 146 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSK 205

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 270
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  Q +++  GR R +G +F SRGRGF 
Sbjct: 206 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQTYFTQRGRGRNQGGRFLSRGRGFT 265

[Close]

BLAST of Moc06g10900 vs. ExPASy TrEMBL
Match: A5BC00 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007944 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 87/221 (39.37%), Postives = 127/221 (57.47%), Query Frame = 0


Query: 92  DLQTSTWTNNDGLLTSWLLGIIDEDVLALIE----------------------------- 151
           D    TW++NDGLLTSWLLG++ E+V+ L++                             
Sbjct: 69  DQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTKEKEVQLTN 128

Query: 152 ------------DEYIRKFKGLCDKLAAVRKPLDDVTKVFHLARGLGCKYKEFKIAMLTK 211
                       DEY+R+FKG+CD LAAVRKP+ D+ K F LA+GLG KY +F++AML+K
Sbjct: 129 RLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKXFQLAQGLGTKYMDFRVAMLSK 188

Query: 212 APYPTYNEFILALKTHQQLVLNDEEEEKSNQINLNQAFYSNHGRSRGKGRQFSSRGRGFY 270
            PYP+YN+F+LAL+ H+Q+++ + EE K + IN  QA+++  GR R +G +F SRGRGF 
Sbjct: 189 PPYPSYNQFVLALQGHEQMIMTENEENKES-INHEQAYFTQRGRGRNRGGRFLSRGRGFT 248

The following BLAST results are available for this feature:

BLAST of Moc06g10900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154021.1	1.1e-51	57.21	uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncha...	[more]
RVW19921.1	3.5e-32	40.39	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]
RVW43526.1	5.9e-32	39.82	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN74381.1	2.2e-31	39.37	hypothetical protein VITISV_007944 [Vitis vinifera]	[more]
RVW82530.1	2.2e-31	39.37	hypothetical protein CK203_046287 [Vitis vinifera]	[more]

BLAST of Moc06g10900 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g10900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMG5	5.5e-52	57.21	uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A438C9J9	1.7e-32	40.39	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A438E6Z5	2.9e-32	39.82	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438HDK5	1.1e-31	39.37	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_046287 PE=4 SV=1	[more]
A5BC00	1.1e-31	39.37	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007944 PE=4 SV=1	[more]

BLAST of Moc06g10900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 123..253
None	No IPR available	PANTHER	PTHR47481:SF2	SUBFAMILY NOT NAMED	coord: 123..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g10900.1	Moc06g10900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding