Moc06g10830 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g10830
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRho GTPase-activating gacO-like protein
Locationchr6: 8155766 .. 8162193 (+)
RNA-Seq ExpressionMoc06g10830
SyntenyMoc06g10830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATCCAAAGTCATGTGGATCAGGTCAGCAAAAATTGGGGCCAAAATGGAGTGTACTAGGCTTATTTTGTAGCACATCGATTTCAGGAGTTGAGTGCACTTGGACAACCTATACGCAAGACAACCAGCAGCCAGAGCGCTGACACATTGCGTCAAATCACAGGTCGTTCCAAAGGATCACCCAGGACACCGACATTCCCCCTTTTGCAGGACATAGAGGGAAGTAGAATCACTATTGGTCTCCACAACCCCTTGGTGCAACATTCTACCACCTGTGTTCGCCTCTCCACAATCCCTTTCAACGTCCCTTCCTTCCGCATATAAAAAGGGAGGAACAACCACAACTGAGGTAAGCCAAAATTTCTTACATAACTCTGGGTGAGAATTTGGCACACACAGTTAATCTCAAGCACTCTCATTTCAAAATTACTGCTTCCTTATTCTACTTGCTCCATACACGTTTGCTTTTATCTTAAGTTCAAACTTTGACATCAGAGTGCATTTGGCAGAGTACCACACTGATGCTAGATTTCTATATGCAGATAACCTAGAGAATTAGAAGACGAAGACATACGTGGCACCTACATAGACACCTACATAGTACTTGCCTAGAAATCGGCATCAACATAAAGGATTTTTATAATCTTATAGGTTAAGAAATTTATCTCACGGTAGATGGTAGCATTATTAGCATCAATTTTTTTTGGTAAATATGTCAATTCGAGCGTAGTTAATCTAGTCGAGGTACGACATAGACTTTGTTTTTTGTTATCTATTTTGATAAAGGGGGTTCTAGCCTAAATTTTGAATTCAAATACAATGAAAAAAGAATCTAAAATCTTATCATAAAGAATAAGAAAAAGAATAGATTATAAGGTGGCATGTAAGTAATTTGAAAAAATATGATAACTTTATATGAGTTATATTTCCTTCAAAAAAAATTTTTTTAATACAATAGGGGTCGGGTTCGAACTCTTGATCAGAGATATGTGTTTTAACCACTTGAACTATGTTCGATTTGATATTTTTCTTTCTAATTAAAGTATAATATTTTAATTAAAAATCTATGACACAGATTTTTAACATCTAGACATAAAAAGAGATATACATATTTAAAAATTTAAAAATATTTTAATAATTTTTTTAATATCTGTAAGTATTCAGATCAGCTCGACTAATTTTATAGGACAACCGTCTCATCCGACTATAATTGATTATCAAAAAACTCATATAATATTAAATCTTAGGTAAATCGTCATTCTAGTTTGTTTGAACTCATTCTTTTCCATTTTCTAAATTTCATACACTACAATATCATATTTATACAAGCATACACTAACATATACTTCCTTTAGCTAGCATTAATATATCAAATAAATAATGTCACAACCATATTTTATAATTTACATAGAATTTAATTTTTGTCAGAGAATAATTAAAACAAGCAAAGGAATTATTTTGGTTATGGGTATAGAGAAAAATAAAATATAATATTATATAGAGAGGAAATGTTTGCTTGTTGGATCCTCTACCCAAGATTGAGACGATTGTTATTCATAGTTCAAAATATTTGTCGACATATGGACGTTTCCATCGACATTTCATATTTTTATGGGTTCAACATCGACATGATGAGTAAATTGACAAAATATGAAAAATATCAATAAAATGTCAATATATATAGTATTAATATTAATTATTTTTAATTTATTTAGAACTAAGAAAATGTGTATTTGTTAATTTAAATATTTTTTACGATTTTTTAATTTCCATAAAATATTTTAATTTAAATAAAATGTGTATTTCCATAAAATTGAGACCTTAACATTTTCATGACATCGACATTTAAAATCTTACAGCTATCTCTATTTATTTATTTATTTTTCTTTCAACCTGCATCTTATATTTTAAATATATAATATAGTTTTAAAATGAATATTTATTATTTATTTTATTTTTTAAAAGAAAAAGTTTCTCTTCACTCTCAATTTTTGAATCCACCTCTAACAATGAAAAAGTGAGTGGTGGACGATAGGACATCTCATGCTGCCTGGTAAGAAAGTATTGTTCATATAATTTTGTGTTTAGATGTCTAATTGTGGCCTCTAAGCTTTTTAGAATCATATTATTTTGTTTAGATCTTGGAAATTTTATGTGGAAATGTGTGTTTAAAACTATGCATAGTATGTTACGGGAGGAAACATGGGCAGCCACGTATTACACAACCAAAGGAAGTAGGTTGAATTAGTGATGTCAGCAAAGCTCTGTGGGACGAGTCAGGTCGACCTCGCCTTACTGTTACCATCGTCAGTGCGTGTGAAAGGGGGATTTGACTGAACGTGGTTAGCGCCCATCACCATTTTGACCACGCCCGAAATCAAGGGAGAGAATCTCGACCGTCCTTACCAACCAATTCAATTTCAATTGCCTATAAAAGGAGTGAGTAATTGTTACCTAGGTATGTTGGAATCTCCGCTCATATACTACACACATTCTCTCCTCCATGAGTTAAAATGAAAAAAGGAAAAAAAAATAGATAATAGATATGAAAGAAAAGAGGAAGAGAGAGAAAAAGAAGATAAAAATGAAAAAAAAATCATATAATTTAAAATAAAAATAATAAATATACAACTCACCGATGCCACATCAGCATTTAGTTATATCACTAACGGAAGTTTAATCCAGGGAACCTTTTAGAACTATTTTTCAAAGGACTAAACTGTAACTTTTTGAAACTTAGTGACCAAATAGAAATCTAATATTAAATTCAGGGACTAAAAGTATATTTTACCTGATAAAATATCATATTTTATTTGAAATATTTATAAATAATTTGTCACGTTTGATTCTATTATACCTTAGTAATGACATAAATTCTAAAAGCGGAACAATAATAGTCAAACTTTCAATGAAACAAATTAAAGTCAAAGGGTAAAGCATATTTCACTAAAATTGTCATTTAATCTAAAACAAGTATTATTGGTTATCCTTGTAAAAATAGTTTAGCCTAGTTCTCTTTTTTACCCTTTTAATAATAAAAAAAAAAGTTTTAAGACTTATTCAAATTCATATATTTTTAATTAAATTGACGTATTAGACCCCATATTGTTAATATATAATATTACATCATGAAGCTCATTTCTCACATCTATAGGTAGCTCACTTTTAGATTTTTTTAATTAACTTCAATAAAAATATAAGTAGAACTTTCGAAAGCAACAAATTAAAATTATGGTCAAAGCATAGGGCCTCTATAATTTTACCTAATTTTAATTTCATTTCAAATAACCAAGGGGTGAAAAGTAAGATGTTGATAGTCTCAACCCAGGACTTAATAATGACAAGGTTAAAAAATGGTAATGAGAAACATTTTTGGATTTATTGTAACTTGTAAACAGACCTGTTTTAAATGATAAAAAAAAAATGGAGAAAAAAACACAACTTTTCTTTTTTTCCTATCAAATTTCTACCAAAAAAGAAAACAGTTAAATTATAAGTATAATTTTAAAACTCCCTAATCTTTTATTAGGGTAATATTTATTTAATCCCTATATTTTAGAGCGTTCTTAATGTCTCTAAACTTTCAATTTTATATTAATGAATAAGTCTCTACCATTAATTTGTTTAACTACTACATAATAAGCTAATTATGTTTTTTTTTTTTATAAGATCATACCTACGATGAGTTGGTTTTAGGCATAATCCTAAAATAAGACAATCAACATATGAAATTAGTGCTAGGCTAACAAAGTTAATGACAACAACTTATAAGATAGGAGGATTTATAGTTAGACGGCAATACATACCAAAAGATTCGAAGAAGAAACGTGCATAAAGAGTATATAAACCAACCCATCATTCAATATAACTATTAACATTAGTGTAGCAAAGGGATACGCACATACGTTTGAGTGACCTTAGTCGATAACCTACAAGCATGATTTAATGGCTAAACTAGGCCATTTGGACAAAGTTTCTCAAATTTGAAGTCTCTATTGCCTCTCCTCTCTAAGTAAAAGTGAAATCTCGAGGTAACTGAAAGAAGTACAAAAAACGGTCAAATGTAATTACCAACGTCAAAAAGAGTCAGTTTAGAGATTTATTAGAAACTTTTCAAGTTTACGAACAGTGGATAGAATTTTGCTTTAATAGCTAAACTAGGCTCGTGAGAGAGATGAAATCAGAGGTTATATAAAGAGAGACCCAAATTTCCCCAAGATTTTCATGACATCACTGAGAAATTTCATTGCGTTGAGTGATACAAATTTACCGGAGTGGCCTCGCTGTTGGACTTTTGCCTCTCACTACACACGCTATCAACAAGAAATATCTCTTTACGCCTCTCTCTCTCTCTCTCTCTCTCGTGCTGCCTCTGATTCATATGGGCAGGTCTTTAAGTGGCCTTCCCCACTGTTTCCCATATCCCCAATCCTTCTTATTCCTCTTTTCGATTTCAATGTTCATTTAAATCCCCTCTTCAGATCATTTCTTATGCCTCTGAAATCTTTCCCTTCTTCAACAGCACCACCCACATGAATCTTTCTCTGTTCTTCTGAGTTTCTTTTGCTTCTTTCACAGATTGAAGCTAATGGGTCCTCTCCCATGATTCGTATGGGCTTCGCTTCTTGTCAGGTTTTCCCTTCTTTTTATTTAAGTTTATTTGCTTCTTGTTCTTGTTCTTGCTCTTGGTTCTTGTTTTGGCTGTGAAATTAGATTAGTTTGTCAATCAACTGCTGTGGTTTTGCTGTTCGAAGAATCTTGCCCCTCCAATCGGGTTTTGGTGCGTTCTTGGTGGATCTTGGTTTGTTTCTGCTGTTGGGAGATTTTCATTGTTCTGATTATTTGAGTTTCTGCTTCTGTAAAATCTTAGCGTGCTTCGAATTGGGTGTCTCGGATTGAGATTTGTTCATCTTTCTGATTATGTTATCTTGTTCTTTACTGCGATTTTGTGGGTGGGTTCAAGAATTGAAGAAATTTCCATGGAAGTTTCATTAGTTTTAAATTTTCAATTTCCCTCTCTGTAGTTCTTTTTGAATGTGCTGATTGCTTGCTATGTCTTCTTTTTGGGAATTCTTCTCTAATGGGATTAACTTTGTTTTGCATTTTGGTTGAGTTTTCATCTCTTGGGGAATGGTTTTGAACTCCGATAGCTTACCTAATGTGGGGAAGTCAACTTCAAGTTTGAGAAACTTGAGTGTCCCAATAGCAACTCCGATTTTGTTTTATGCTAAACTTTAAATTGATAGGTTAGAGCATATAATACTCTTAACATTTTCCTCTGCTCGTGGGCTGTTGATATCAATTAGGAGAAAATAACATCACCGGGATTCAAACTTAGAATCTACATCATTTATCCCCAAATCTTAAGTTGATTGGTTTGAGCATCTCTATTCTTTTATATATACTCTTAACACTCCCATCACGTGTAGGCTTAGATATTAACTTGATTCACGAAGCCTAGCACGTAAAACATCGATATCAGTTGCGAAGAAAACAATGTTGGATTCAAAATCAGGAACTCCTAGTTGATATTATGTTAAATACCCTCGAACCCAAAATATTGAGTTGATAGGTTAAATTATATTTGATCTTTTATTTATATTCTTTAACGTGTTGTTATCTTTTCGTGATTCAAGATGAAAGAACTTATGATTAAGCTTTGATAAATTTGTTATTTCTCTGAGCTTCTTGACCTATAATGTTCTCACTGTGATGTAACTTTGGTCTAGTTCTCACTGTATTCTACTGATTAGGTAATTTCCATACAAAAAGTATGTTTGAACTGAGGAAGTATTATAATTGCATCAGATGCTTTATGCTTGATGTATATCCATCTGCTGGTTACCATATTTGAGTGTGTCAAGTTCGTTTAGTTCCCGAGTTTCTTACTGTAAGAGAATCAAAATCTTTTCATATGTAATTGCATTGTGCTTGTTTCGTGCTTGGCAGTGGTCGTTTGTTGCGTGATTTTTCTTTTTCCATTCTTGGAGTTGTTGAAGAGGATGGGTAGAGGGCGAGGAAAGGGGAGGAAGTTGAGCGTCACGAATCATGATGATGCTGGGAGTGGTGAGGAGGAGAAGATTCCCGCGCAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGGTGAGAATAAGATAGAAGACGACGACGGAGAGAACCTGAAAGGCGGGGACATCATCAGCAATAAGGAGATGAAAAGCCCTGCTGCAGCAGAGAATGGGAAAAGGAGGAGGAGAAACTCACAGGCGAAAGAAAAGCTCGACTCGGTCAAAGAGGAAAACGGGGATGGAACGCGATCAAGCACCGATGAATCAACCAGATCAAATGGATTCCGCCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCAGAAGCGGGCGTCAACTGCAAGTGA

mRNA sequence

ATGGGCATCCAAAGTCATGTGGATCAGGAGTTGAGTGCACTTGGACAACCTATACGCAAGACAACCAGCAGCCAGAGCGCTGACACATTGCGTCAAATCACAGGTCGTTCCAAAGGATCACCCAGGACACCGACATTCCCCCTTTTGCAGGACATAGAGGGAAGTAGAATCACTATTGGTCTCCACAACCCCTTGGTGCAACATTCTACCACCTGTGTTCGCCTCTCCACAATCCCTTTCAACATTGAAGCTAATGGGTCCTCTCCCATGATTCGTATGGGCTTCGCTTCTTGTCAGATTAGTTTGTCAATCAACTGCTGTGGTTTTGCTGTTCGAAGAATCTTGCCCCTCCAATCGGGTTTTGGTGCGTTCTTGGTGGATCTTGTGGTCGTTTGTTGCGTGATTTTTCTTTTTCCATTCTTGGAGTTGTTGAAGAGGATGGGTAGAGGGCGAGGAAAGGGGAGGAAGTTGAGCGTCACGAATCATGATGATGCTGGGAGTGGTGAGGAGGAGAAGATTCCCGCGCAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGGTGAGAATAAGATAGAAGACGACGACGGAGAGAACCTGAAAGGCGGGGACATCATCAGCAATAAGGAGATGAAAAGCCCTGCTGCAGCAGAGAATGGGAAAAGGAGGAGGAGAAACTCACAGGCGAAAGAAAAGCTCGACTCGGTCAAAGAGGAAAACGGGGATGGAACGCGATCAAGCACCGATGAATCAACCAGATCAAATGGATTCCGCCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCAGAAGCGGGCGTCAACTGCAAGTGA

Coding sequence (CDS)

ATGGGCATCCAAAGTCATGTGGATCAGGAGTTGAGTGCACTTGGACAACCTATACGCAAGACAACCAGCAGCCAGAGCGCTGACACATTGCGTCAAATCACAGGTCGTTCCAAAGGATCACCCAGGACACCGACATTCCCCCTTTTGCAGGACATAGAGGGAAGTAGAATCACTATTGGTCTCCACAACCCCTTGGTGCAACATTCTACCACCTGTGTTCGCCTCTCCACAATCCCTTTCAACATTGAAGCTAATGGGTCCTCTCCCATGATTCGTATGGGCTTCGCTTCTTGTCAGATTAGTTTGTCAATCAACTGCTGTGGTTTTGCTGTTCGAAGAATCTTGCCCCTCCAATCGGGTTTTGGTGCGTTCTTGGTGGATCTTGTGGTCGTTTGTTGCGTGATTTTTCTTTTTCCATTCTTGGAGTTGTTGAAGAGGATGGGTAGAGGGCGAGGAAAGGGGAGGAAGTTGAGCGTCACGAATCATGATGATGCTGGGAGTGGTGAGGAGGAGAAGATTCCCGCGCAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGGTGAGAATAAGATAGAAGACGACGACGGAGAGAACCTGAAAGGCGGGGACATCATCAGCAATAAGGAGATGAAAAGCCCTGCTGCAGCAGAGAATGGGAAAAGGAGGAGGAGAAACTCACAGGCGAAAGAAAAGCTCGACTCGGTCAAAGAGGAAAACGGGGATGGAACGCGATCAAGCACCGATGAATCAACCAGATCAAATGGATTCCGCCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCAGAAGCGGGCGTCAACTGCAAGTGA

Protein sequence

MGIQSHVDQELSALGQPIRKTTSSQSADTLRQITGRSKGSPRTPTFPLLQDIEGSRITIGLHNPLVQHSTTCVRLSTIPFNIEANGSSPMIRMGFASCQISLSINCCGFAVRRILPLQSGFGAFLVDLVVVCCVIFLFPFLELLKRMGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Homology
[Close]
BLAST of Moc06g10830 vs. NCBI nr
Match: XP_022154112.1 (uncharacterized protein LOC111021447 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-65
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN
Sbjct: 1   MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGVNCK
Sbjct: 121 NGSRRKSKPRRAAEAGVNCK 140

[Close]
BLAST of Moc06g10830 vs. NCBI nr
Match: XP_038879962.1 (uncharacterized protein LOC120071662 [Benincasa hispida])

HSP 1 Score: 229.2 bits (583), Expect = 4.6e-56
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIP QKRRGRPQKPLKDEIDEEE E KIED+D EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPVQKRRGRPQKPLKDEIDEEEAE-KIEDEDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKG DI+S KEMKSP AAENGKRRRRNSQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGSDIVS-KEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGVNCK
Sbjct: 121 NGSRRKSKPRRAAEAGVNCK 138

[Close]
BLAST of Moc06g10830 vs. NCBI nr
Match: XP_004149029.1 (uncharacterized protein LOC101218566 [Cucumis sativus] >XP_004149030.1 uncharacterized protein LOC101218566 [Cucumis sativus] >XP_008451134.1 PREDICTED: uncharacterized protein LOC103492511 [Cucumis melo] >XP_008451135.1 PREDICTED: uncharacterized protein LOC103492511 [Cucumis melo] >XP_031745743.1 uncharacterized protein LOC101218566 [Cucumis sativus] >KAA0042286.1 uncharacterized protein E6C27_scaffold824G00790 [Cucumis melo var. makuwa] >KGN66448.1 hypothetical protein Csa_007243 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-55
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE-KIEDEDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGSDIVS-KEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGV+CK
Sbjct: 121 NGSRRKSKPRRAAEAGVSCK 138

[Close]
BLAST of Moc06g10830 vs. NCBI nr
Match: XP_023516906.1 (uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 8.6e-55
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIEDDD EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE-KIEDDDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           +KG DI+S KEMKSP AAENGKRRRR+SQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  VKGCDIVS-KEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKP RAAEAGVNC+
Sbjct: 121 NGSRRKSKPHRAAEAGVNCR 138

[Close]
BLAST of Moc06g10830 vs. NCBI nr
Match: KAG6590227.1 (hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023867.1 hypothetical protein SDJN02_14894, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-54
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIEDDD EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETE-KIEDDDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           +KG DI+S KEMKSP AAENGKRRRR+SQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  VKGCDIVS-KEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKP RAAEAGVNC+
Sbjct: 121 NGSRRKSKPHRAAEAGVNCR 138

[Close]
BLAST of Moc06g10830 vs. ExPASy TrEMBL
Match: A0A6J1DKT0 (uncharacterized protein LOC111021447 OS=Momordica charantia OX=3673 GN=LOC111021447 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 8.9e-66
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN
Sbjct: 1   MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGVNCK
Sbjct: 121 NGSRRKSKPRRAAEAGVNCK 140

[Close]
BLAST of Moc06g10830 vs. ExPASy TrEMBL
Match: A0A1S3BRW6 (uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE-KIEDEDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGSDIVS-KEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGV+CK
Sbjct: 121 NGSRRKSKPRRAAEAGVSCK 138

[Close]
BLAST of Moc06g10830 vs. ExPASy TrEMBL
Match: A0A5A7TJZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00790 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE-KIEDEDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGSDIVS-KEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGV+CK
Sbjct: 121 NGSRRKSKPRRAAEAGVSCK 138

[Close]
BLAST of Moc06g10830 vs. ExPASy TrEMBL
Match: A0A0A0LXE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D EN
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE-KIEDEDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           LKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  LKGSDIVS-KEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKPRRAAEAGV+CK
Sbjct: 121 NGSRRKSKPRRAAEAGVSCK 138

[Close]
BLAST of Moc06g10830 vs. ExPASy TrEMBL
Match: A0A6J1H9S1 (uncharacterized protein LOC111461426 OS=Cucurbita moschata OX=3662 GN=LOC111461426 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-54
Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGEN 206
           MGRGRGKGRK +VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIEDDD EN
Sbjct: 1   MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETE-KIEDDDSEN 60

Query: 207 LKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSNGFRH 266
           +KG DI+S KEMKSP AAENGKRRRR+SQ KEKLD VK+ENGDGTRSSTDESTRSNGFRH
Sbjct: 61  VKGCDIVS-KEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRH 120

Query: 267 NGSRRKSKPRRAAEAGVNCK 287
           NGSRRKSKP RAAEAGVNC+
Sbjct: 121 NGSRRKSKPHRAAEAGVNCR 138

[Close]
BLAST of Moc06g10830 vs. TAIR 10
Match: AT2G42190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57930.2); Has 1381 Blast hits to 1230 proteins in 175 species: Archae - 3; Bacteria - 25; Metazoa - 672; Fungi - 135; Plants - 127; Viruses - 30; Other Eukaryotes - 389 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-23
Identity = 72/148 (48.65%), Postives = 94/148 (63.51%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIE------ 206
           M RGRGKG+K + +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE E+  E      
Sbjct: 1   MRRGRGKGKKQNASAREDRGSGDEEKIPAYRRRGRPQKPMKDDFEEEEEEDDEEMVEKME 60

Query: 207 -DDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDEST 266
            +D+ E +  G + S          ++ K R+R        D  +EENG G++ +TD+ST
Sbjct: 61  VEDEDEEIDDGSVTS----------KDLKERKRKMSNGSNTDLTEEENGLGSKPNTDDST 120

Query: 267 RSN--GFRHNGSRRKSKPRRAAEAGVNC 286
           RS   GFR NGSRRKSKPRRAAEA V C
Sbjct: 121 RSTSIGFRQNGSRRKSKPRRAAEAVVEC 138

[Close]
BLAST of Moc06g10830 vs. TAIR 10
Match: AT3G57930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-23
Identity = 71/144 (49.31%), Postives = 102/144 (70.83%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEG--ENKIEDDDG 206
           M RGRGKG++ + T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE   +   E++D 
Sbjct: 1   MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDEEEEEEELVKKTDEEEDK 60

Query: 207 ENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSN-- 266
           ++   G + S + +      ENG++R++  ++KE  +  +EENG G++SST++S +S+  
Sbjct: 61  DDDTNGSVTSKENV-----TENGRKRKKPVESKES-NITEEENGVGSKSSTEDSMKSSSS 120

Query: 267 -GFRHNGSRRKSKPRRAAEAGVNC 286
            GFR NGSRRK+KPRRAAEA V C
Sbjct: 121 IGFRQNGSRRKNKPRRAAEAVVEC 138

[Close]
BLAST of Moc06g10830 vs. TAIR 10
Match: AT3G57930.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-23
Identity = 71/144 (49.31%), Postives = 102/144 (70.83%), Query Frame = 0 

Query: 147 MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEG--ENKIEDDDG 206
           M RGRGKG++ + T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE   +   E++D 
Sbjct: 1   MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDEEEEEEELVKKTDEEEDK 60

Query: 207 ENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTDESTRSN-- 266
           ++   G + S + +      ENG++R++  ++KE  +  +EENG G++SST++S +S+  
Sbjct: 61  DDDTNGSVTSKENV-----TENGRKRKKPVESKES-NITEEENGVGSKSSTEDSMKSSSS 120

Query: 267 -GFRHNGSRRKSKPRRAAEAGVNC 286
            GFR NGSRRK+KPRRAAEA V C
Sbjct: 121 IGFRQNGSRRKNKPRRAAEAVVEC 138

The following BLAST results are available for this feature:
BLAST of Moc06g10830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022154112.11.8e-65100.00uncharacterized protein LOC111021447 [Momordica charantia][more]
XP_038879962.14.6e-5690.71uncharacterized protein LOC120071662 [Benincasa hispida][more]
XP_004149029.11.3e-5590.00uncharacterized protein LOC101218566 [Cucumis sativus] >XP_004149030.1 uncharact... [more]
XP_023516906.18.6e-5589.29uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo][more]
KAG6590227.11.5e-5489.29hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Moc06g10830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g10830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DKT08.9e-66100.00uncharacterized protein LOC111021447 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A1S3BRW66.4e-5690.00uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=... [more]
A0A5A7TJZ96.4e-5690.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LXE86.4e-5690.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1[more]
A0A6J1H9S12.1e-5488.57uncharacterized protein LOC111461426 OS=Cucurbita moschata OX=3662 GN=LOC1114614... [more]
BLAST of Moc06g10830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42190.11.4e-2348.65unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G57930.11.4e-2349.31unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G57930.21.4e-2349.31unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..45
NoneNo IPR availablePANTHERPTHR34055:SF1OS09G0491596 PROTEINcoord: 147..286
NoneNo IPR availablePANTHERPTHR34055OS09G0491596 PROTEINcoord: 147..286

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g10830.1Moc06g10830.1mRNA