Moc06g09380 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g09380
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr6: 6851860 .. 6855687 (-)
RNA-Seq ExpressionMoc06g09380
SyntenyMoc06g09380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTCTCCCGATCCTCACGCAGTACGACCCGAATTTACCTTGTCTCGACCGTGGATTCGACATTGGGCCAATTACAAAACACACATACTCAAAAGTCTAGATCTACTAGACACACTAGGATTCAACTTTGATAATTTCTAAAGGGCTTAGAGTTCCACTTCTATAAATAGAACGGTAAGCCAAACCCTAGAAGTATGTTCACAATACGCTACACTTCATATTCAACTACTCCGATCCTAACTTAAGCATCGGAGTCCGTTTTGCAAAAGTCGCACTGGTCTTAAAGTTATTCTGGTTTACAGGTCTCGTCTATCCCTTTAATCTAGAAGATCGTGCGAATATTGGCGGAATCCTGTGAAGCCAAATTTCTATATCAACAAGAGATGTGTCAAGAGAGAAAGCCTTTCATGAGACTGTTAAGCCAGCTCACTGAAGTTCATTGATGTGGCCATCTTATGTGGTTTTTATTGTTTAGTTGTGCTGGGTCATTTAGTTTATTATTAATTTGTTTTTTGTTTGTTAGTGCAGGAGTTTTTCAACCTTATATATACAAGGCTTCTCTGTATTATTAAGTCATTGAATGAGAAGTAGAAATGACTTTTCTCCTGGATATAGGAGTTTCACATGGTAACAGAGCTTGCGTCTTGCGACAGAGTTCGATCATATGATTAAAAAAAAATTTCTCTGAATCCGTGATTCAGAAACATACCGCAAGATCTCTTTATCAATTCAATTCAGTTGCAGTATTGTGTTTTTGCTATTTCTTCTTCAATTTTTGCGATCTTTTGCAATGGACCAGTGAACGAACACTGAAGGTGAATCTGCTGGCAACGATGGAATTCAATGCAATCTAGTGGTAAATCCGGGTAACAAGATCTCTACCGTGAAGTTAACTGATGATAATTTTCTTTCGTGGAAATTTCAAGATCTCACTGCCCTAGAAGGTCACGGTTTAGAATCACATTTGGAACATGATCCGCCTTTTAAATTCCTTCAGGTTAGTGACAAATCTTCTATTGCTCTAAAATTAAATTCGGTTTTTACTAAGTGGAAGCGTCATGATAAATTGATATCCTCGTGGTTACTTGGTTATATGACTGAGACATTACCTGAACAATTACTACATTGTACATCGGCTAGGGAGATATGGAATTATCTTAGTACAAATTTTCACGTCTAGAAATTTAGCATAAGTGATGAAGAAAATTACAAACTCTACAAAAGGGAAATTCTAAACTAAAAGACTATTTTTCTCAAGTTAAAAAGTGTATTGATGCTCTAGCAGCCGTCGGTAAACCAGTTTCTATGGAGGATCATATTGTTTATCTATTATCGGTTTAGGATCTGAGTTTGAGTCGATGATTTCTGTTATTTCTACGAAATCTGGTCCTCAAACAGTACAAGATGTCATGGCTCTATTATTGACACAAGAAAATAGAATTGAAAGAAAGAAGAGTTTGATTAATTTTGATTGCACTATTCCTTCAGCCAATCTTACACATGCTGCTGCTATGGGCAAAGAGAATGATGCTCCTAGAAATAGCGCTCAGTTTGAGAATAACCATGGGGCAACTAATCGATTTCGAGGTTGGAACAATAAAGGAGGCCAATAGTGGAACAATAGAGGTCGAATTCAGTGCCAATTGTGTGGCAAATTTGGTCATACTGCTTCAAAGTGCAACTTTCATTTTGATCCAAGAGTTCAAAGACCTCCTTCCTCTGGTTCTAGTTCTTATTCTCCTCAGTACCAAACGGCCAATTTCTCCTCAAATGTCTGCACTGCTTACTACTCTACATTTGAATCATGATACCAACTGGTATCCTGATTTGGGTGCAACTAATCACCTCACTCATAATTTCAACAACTTGGTTGTTGGTACAGAATATCTTGACAGTAACCAAGTACAAGTTGGGAATGGTGCATGTTTCGACATCTTTCATTTTGGCCATTCTTCTTTTCAATCTCCTACTAATCGTATTCTTCATCTTAATAATTTACTTCATGTTCCTCAAATAACTAAAAACCTCATAAGTGTCAGTCAGTTTGCCAAAGATAACTCGATATTTTTTTAATCTCATCCTCTTTTTTGCTATGTAATGGATCCACATACTGGCCAAATACTTCTTCAATCGAGGGACTCTACATGATGGATTGTACCGGTTTCAACTCTCTTCTCTTTTGTCTGCCAATCTATTTTAAGCTCCCTTTGCATCTCAAGCTTTGACTACTCAGACTTTTCCAGTTTCATATTCTGTTTCTTCTTGTCATTCAGCATCTTTGTCTTCTGTTGATTTGTGGCATAGGCGACTTGGGCATCCGACCCTTCCCATTGTTAGACACATAATAAACTTGGACAAACCATGTACATCTTCTTCTATGTCTATGAATTTTTGTAATACTTGTGCTATGGGCAAAACTCATGCTCTTCCTTTTGTTCCTTCTACTACTGTTTACACAGCTCCCCTGCAATTAATTATATCTAATTTGTGGGGACCTGCTTTTACCGCCTCTAACAATGGCTTCAAATACTATATTAGTTTTGTTGATGTTTTCTCTCGTTATACTTGGATTTATTTTCTTCAATCCAAGTCGAATGCGTTTTCTATTTTTCTTCGGTTCAAAACTATTATTCAAAAACTTCTTGGTTGCTCTATTCTTCATTTTCAATCTGATGGGGGTGGGGAGTTTAAACCATTTACTTCTTTTCTTCAACAACATGGCATTGAATATAGGATTACCTGCCCCTACATGTCTCAACAAAATGGCATTGCTGAGCGCAAGCATCGTCACATCGTTGACACTAGTTTGACCTTATTATCTCAATCCTCCATGCCTTTATCCTTTTGGGATGATGCATTCTCCACATCTGTATATCTTATCAACCGGTTACCGACAACAGTCCTTAGTGGAGTGAGTACTTTGGAGAAGTTATTTCACTACAAGTCTGATTATTCATGGTTAAATGTGTTTGTGTGTCAATGTTTTCCTTGCTTGCGTCCTCACAACTCCCATAAACTTAATTTTCAATCTCAACCCTGTACTTTTCTTGGTTATAGCAGCACCTACAAAGGATATAAATGTCTTTCTTTCGAAGGAAAGGTTTTTGTGTCTCTACACAAGTATCCCAAACTTTGTCCTCCTCTCCCTTATCCATTTCTGTTCGGTCCTCATCTCTTATACCTGCATCTGCACTACTTGCGTCTGCTTCTTTGCCTGTAGCTACTGCTGGTTGTTTAAATTCTGCACCTATTAATACCGTGGTTGCTGCTCCTATCACGATTCCTAATACTATTGTATCTCTCAATGATGTACCAGCTGTTGTACCTCATGATAATGTGTCTGCTCCTACAATTGATGGGTCACAATCCATACTTCCTACTGTTGTACATGGCGTACCGGTTTTATCTTATGGTTCCTTGGATGTATCTCAATCTGATGGTTCTTCCGCTGGTACTTCATTACCTGCATCTTCTTCTTCTGAGCCGTTGATCTCTACCCCTCTTATACGTAATTCTCATCACATGATTACTAGAGGGAAAAGTGGTATTTTTAAACCTAAAGTTTTTATAGTTGATTATAAAGAAGTTGAACCACCGAATGTTCAAGAGGCTTTGCGACATGATCATTGACGGCAAGCTATGAATGAGGAATATGCTGCCTTCATTCGAAATCATACCTGGGATATTGTTCTCCAACCTCTTCATCAGAAACTTGTTGGATGTAACTGGGTTTTCAAAATCAAGAGGAATTGTGATGGTCATTTTCAGGGTGTACACCCCTAAATTTGTCTGGTATTCTATTTCATCATTCTTTCTTTACTTAA

mRNA sequence

ATGGTTCTCTCCCGATCCTCACGCAGTGAATCTGCTGGCAACGATGGAATTCAATGCAATCTAGTGGTAAATCCGGGTAACAAGATCTCTACCGTGAAGTTAACTGATGATAATTTTCTTTCGTGGAAATTTCAAGATCTCACTGCCCTAGAAGGATCTGAGTTTGAGTCGATGATTTCTGTTATTTCTACGAAATCTGGTCCTCAAACAGTACAAGATGTCATGGCTCTATTATTGACACAAGAAAATAGAATTGAAAGAAAGAAGAGTTTGATTAATTTTGATTGCACTATTCCTTCAGCCAATCTTACACATGCTGCTGCTATGGGCAAAGAGAATGATGCTCCTAGAAATAGCGCTCAGTTTGAGAATAACCATGGGGCAACTAATCGATTTCGAGAGTTCAAAGACCTCCTTCCTCTGGTTCTAGTTCTTATTCTCCTCAGTACCAAACGGCCAATTTCTCCTCAAATGTCTGCACTGCTTACTACTCTACATTTGAATCATGATACCAACTGGTATCCTGATTTGGGTGCAACTAATCACCTCACTCATAATTTCAACAACTTGGTTGTTGTATCCCAAACTTTGTCCTCCTCTCCCTTATCCATTTCTGTTCGGTCCTCATCTCTTATACCTGCATCTGCACTACTTGCGTCTGCTTCTTTGCCTGTAGCTACTGCTGGTTGTTTAAATTCTGCACCTATTAATACCGTGGTTGCTGCTCCTATCACGATTCCTAATACTATTGTATCTCTCAATGATGTACCAGCTGTTGTACCTCATGATAATGTGTCTGCTCCTACAATTGATGGGTCACAATCCATACTTCCTACTGTTGTACATGGCGTACCGGTTTTATCTTATGGTTCCTTGGATGTATCTCAATCTGATGGTTCTTCCGCTGGTACTTCATTACCTGCATCTTCTTCTTCTGAGCCGTTGATCTCTACCCCTCTTATACGTAATTCTCATCACATGATTACTAGAGGGAAAAGTGGGTGTACACCCCTAAATTTGTCTGGTATTCTATTTCATCATTCTTTCTTTACTTAA

Coding sequence (CDS)

ATGGTTCTCTCCCGATCCTCACGCAGTGAATCTGCTGGCAACGATGGAATTCAATGCAATCTAGTGGTAAATCCGGGTAACAAGATCTCTACCGTGAAGTTAACTGATGATAATTTTCTTTCGTGGAAATTTCAAGATCTCACTGCCCTAGAAGGATCTGAGTTTGAGTCGATGATTTCTGTTATTTCTACGAAATCTGGTCCTCAAACAGTACAAGATGTCATGGCTCTATTATTGACACAAGAAAATAGAATTGAAAGAAAGAAGAGTTTGATTAATTTTGATTGCACTATTCCTTCAGCCAATCTTACACATGCTGCTGCTATGGGCAAAGAGAATGATGCTCCTAGAAATAGCGCTCAGTTTGAGAATAACCATGGGGCAACTAATCGATTTCGAGAGTTCAAAGACCTCCTTCCTCTGGTTCTAGTTCTTATTCTCCTCAGTACCAAACGGCCAATTTCTCCTCAAATGTCTGCACTGCTTACTACTCTACATTTGAATCATGATACCAACTGGTATCCTGATTTGGGTGCAACTAATCACCTCACTCATAATTTCAACAACTTGGTTGTTGTATCCCAAACTTTGTCCTCCTCTCCCTTATCCATTTCTGTTCGGTCCTCATCTCTTATACCTGCATCTGCACTACTTGCGTCTGCTTCTTTGCCTGTAGCTACTGCTGGTTGTTTAAATTCTGCACCTATTAATACCGTGGTTGCTGCTCCTATCACGATTCCTAATACTATTGTATCTCTCAATGATGTACCAGCTGTTGTACCTCATGATAATGTGTCTGCTCCTACAATTGATGGGTCACAATCCATACTTCCTACTGTTGTACATGGCGTACCGGTTTTATCTTATGGTTCCTTGGATGTATCTCAATCTGATGGTTCTTCCGCTGGTACTTCATTACCTGCATCTTCTTCTTCTGAGCCGTTGATCTCTACCCCTCTTATACGTAATTCTCATCACATGATTACTAGAGGGAAAAGTGGGTGTACACCCCTAAATTTGTCTGGTATTCTATTTCATCATTCTTTCTTTACTTAA

Protein sequence

MVLSRSSRSESAGNDGIQCNLVVNPGNKISTVKLTDDNFLSWKFQDLTALEGSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKKSLINFDCTIPSANLTHAAAMGKENDAPRNSAQFENNHGATNRFREFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVVVSQTLSSSPLSISVRSSSLIPASALLASASLPVATAGCLNSAPINTVVAAPITIPNTIVSLNDVPAVVPHDNVSAPTIDGSQSILPTVVHGVPVLSYGSLDVSQSDGSSAGTSLPASSSSEPLISTPLIRNSHHMITRGKSGCTPLNLSGILFHHSFFT
Homology
[Close]
BLAST of Moc06g09380 vs. NCBI nr
Match: XP_022147537.1 (uncharacterized protein LOC111016442 [Momordica charantia])

HSP 1 Score: 122.5 bits (306), Expect = 7.4e-24
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 133 REFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 192
           +EFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV
Sbjct: 66  QEFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 125

Query: 193 VSQTLSSSPLSI 205
            ++ L S+ + +
Sbjct: 126 GTEYLDSNQVQV 137

[Close]
BLAST of Moc06g09380 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-12
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 0 

Query: 52  GSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKKSLINFDCTIPSANL-THAAAMG 111
           GS+++SMISVIS ++   +VQ+VM+LLLTQE++ E K  LI+ +  +PS N+ T     G
Sbjct: 191 GSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESK--LIS-ETALPSVNIVTQTTEKG 250

Query: 112 KENDAPRNSAQFENNH----------GATNRFREFKDLLPLVLVLILLS----------- 171
            E+    N   + NNH          G +NR R      P   +   L            
Sbjct: 251 AESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFFRYT 310

Query: 172 -----------------TKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 196
                            T     PQMSA++  L LN D+NWYPD GATNHLTH+ +NL +
Sbjct: 311 PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSI 370

[Close]
BLAST of Moc06g09380 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-12
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 0 

Query: 52  GSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKKSLINFDCTIPSANL-THAAAMG 111
           GS+++SMISVIS ++   +VQ+VM+LLLTQE++ E K  LI+ +  +PS N+ T     G
Sbjct: 191 GSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESK--LIS-ETALPSVNIVTQTTEKG 250

Query: 112 KENDAPRNSAQFENNH----------GATNRFREFKDLLPLVLVLILLS----------- 171
            E+    N   + NNH          G +NR R      P   +   L            
Sbjct: 251 AESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFFRYT 310

Query: 172 -----------------TKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 196
                            T     PQMSA++  L LN D+NWYPD GATNHLTH+ +NL +
Sbjct: 311 PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSI 370

[Close]
BLAST of Moc06g09380 vs. NCBI nr
Match: TYJ95829.1 (putative copia-like retrotransposon Hopscotch polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 8.4e-12
Identity = 73/246 (29.67%), Postives = 102/246 (41.46%), Query Frame = 0 

Query: 10  ESAGNDGIQCNLVVNPGNKISTVKLTDDNFLSWKFQDLTALE------------------ 69
           E    D    + +   G+KIS VKL DDN +SWKFQ LTALE                  
Sbjct: 12  EDVSKDPSSISQIFGSGSKISLVKLGDDN-ISWKFQILTALEAYDLESYLESIVKPPTKY 71

Query: 70  ------------------------------------------GSEFESMISVISTKSGPQ 129
                                                     G+E++ MI VIS ++   
Sbjct: 72  INTPPKPNIDYNWKLFCPYHILNQMLHCTSAKQIWKTLQARLGTEYQPMILVISARTDSP 131

Query: 130 TVQDVMALLLTQENRIERKKSLINFDCTIPSANLTHAAAMGKENDAPRNSAQFENNHGAT 189
           +VQD+M+LLLTQE++IE K   I  D ++P+ N+T      K+N                
Sbjct: 132 SVQDIMSLLLTQESQIESK---ITSDVSLPTVNVT------KQN---------------- 191

Query: 190 NRFREFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNN 196
              R+ + L                  +MSA++ +  LN D+NWYP+LGATNHL HN +N
Sbjct: 192 ---RDIQSL--------------EKECEMSAMVASYDLNVDSNWYPNLGATNHLIHNLSN 214

[Close]
BLAST of Moc06g09380 vs. NCBI nr
Match: KAA0036760.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-11
Identity = 68/226 (30.09%), Postives = 93/226 (41.15%), Query Frame = 0 

Query: 10  ESAGNDGIQCNLVVNPGNKISTVKLTDDNFLSWKFQDLTALE------------------ 69
           E    D    + +    +KIS VKL DDN +SWKFQ LTALE                  
Sbjct: 12  EDVSKDPSSISQIFGSRSKISLVKLGDDN-ISWKFQILTALEAYDLESYLESIVKPPTKY 71

Query: 70  ----------------------GSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKK 129
                                 G+E++ MI VIS ++   +VQD+M+LLLTQE++IE   
Sbjct: 72  INKPPKPNIDYNWKLFCPYPGLGTEYQPMILVISARTDSPSVQDIMSLLLTQESQIESYS 131

Query: 130 SLINFDCTIPSANLTHAAAMGKENDAPRNSAQFENNHGATNRFREFKDLLPLVLVLILLS 189
           +                           NS+ F   + + N                   
Sbjct: 132 A---------------------------NSSNFRYINASHN------------------- 184

Query: 190 TKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVVVSQ 196
                 PQMSA++ +  LN D+NWYP+LGATNHL HN +NL   S+
Sbjct: 192 ------PQMSAMVASYDLNVDSNWYPNLGATNHLIHNLSNLSTRSE 184

[Close]
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match: A0A6J1D2M1 (uncharacterized protein LOC111016442 OS=Momordica charantia OX=3673 GN=LOC111016442 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-24
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 133 REFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 192
           +EFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV
Sbjct: 66  QEFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 125

Query: 193 VSQTLSSSPLSI 205
            ++ L S+ + +
Sbjct: 126 GTEYLDSNQVQV 137

[Close]
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.3e-13
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 0 

Query: 52  GSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKKSLINFDCTIPSANL-THAAAMG 111
           GS+++SMISVIS ++   +VQ+VM+LLLTQE++ E K  LI+ +  +PS N+ T     G
Sbjct: 191 GSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESK--LIS-ETALPSVNIVTQTTEKG 250

Query: 112 KENDAPRNSAQFENNH----------GATNRFREFKDLLPLVLVLILLS----------- 171
            E+    N   + NNH          G +NR R      P   +   L            
Sbjct: 251 AESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFFRYT 310

Query: 172 -----------------TKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 196
                            T     PQMSA++  L LN D+NWYPD GATNHLTH+ +NL +
Sbjct: 311 PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSI 370

[Close]
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match: A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.3e-13
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 0 

Query: 52  GSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKKSLINFDCTIPSANL-THAAAMG 111
           GS+++SMISVIS ++   +VQ+VM+LLLTQE++ E K  LI+ +  +PS N+ T     G
Sbjct: 191 GSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESK--LIS-ETALPSVNIVTQTTEKG 250

Query: 112 KENDAPRNSAQFENNH----------GATNRFREFKDLLPLVLVLILLS----------- 171
            E+    N   + NNH          G +NR R      P   +   L            
Sbjct: 251 AESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSADRCFFRYT 310

Query: 172 -----------------TKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVV 196
                            T     PQMSA++  L LN D+NWYPD GATNHLTH+ +NL +
Sbjct: 311 PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSI 370

[Close]
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match: A0A5D3B9Z0 (Putative copia-like retrotransposon Hopscotch polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001150 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-12
Identity = 73/246 (29.67%), Postives = 102/246 (41.46%), Query Frame = 0 

Query: 10  ESAGNDGIQCNLVVNPGNKISTVKLTDDNFLSWKFQDLTALE------------------ 69
           E    D    + +   G+KIS VKL DDN +SWKFQ LTALE                  
Sbjct: 12  EDVSKDPSSISQIFGSGSKISLVKLGDDN-ISWKFQILTALEAYDLESYLESIVKPPTKY 71

Query: 70  ------------------------------------------GSEFESMISVISTKSGPQ 129
                                                     G+E++ MI VIS ++   
Sbjct: 72  INTPPKPNIDYNWKLFCPYHILNQMLHCTSAKQIWKTLQARLGTEYQPMILVISARTDSP 131

Query: 130 TVQDVMALLLTQENRIERKKSLINFDCTIPSANLTHAAAMGKENDAPRNSAQFENNHGAT 189
           +VQD+M+LLLTQE++IE K   I  D ++P+ N+T      K+N                
Sbjct: 132 SVQDIMSLLLTQESQIESK---ITSDVSLPTVNVT------KQN---------------- 191

Query: 190 NRFREFKDLLPLVLVLILLSTKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNN 196
              R+ + L                  +MSA++ +  LN D+NWYP+LGATNHL HN +N
Sbjct: 192 ---RDIQSL--------------EKECEMSAMVASYDLNVDSNWYPNLGATNHLIHNLSN 214

[Close]
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match: A0A5A7T077 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00410 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.1e-12
Identity = 68/226 (30.09%), Postives = 93/226 (41.15%), Query Frame = 0 

Query: 10  ESAGNDGIQCNLVVNPGNKISTVKLTDDNFLSWKFQDLTALE------------------ 69
           E    D    + +    +KIS VKL DDN +SWKFQ LTALE                  
Sbjct: 12  EDVSKDPSSISQIFGSRSKISLVKLGDDN-ISWKFQILTALEAYDLESYLESIVKPPTKY 71

Query: 70  ----------------------GSEFESMISVISTKSGPQTVQDVMALLLTQENRIERKK 129
                                 G+E++ MI VIS ++   +VQD+M+LLLTQE++IE   
Sbjct: 72  INKPPKPNIDYNWKLFCPYPGLGTEYQPMILVISARTDSPSVQDIMSLLLTQESQIESYS 131

Query: 130 SLINFDCTIPSANLTHAAAMGKENDAPRNSAQFENNHGATNRFREFKDLLPLVLVLILLS 189
           +                           NS+ F   + + N                   
Sbjct: 132 A---------------------------NSSNFRYINASHN------------------- 184

Query: 190 TKRPISPQMSALLTTLHLNHDTNWYPDLGATNHLTHNFNNLVVVSQ 196
                 PQMSA++ +  LN D+NWYP+LGATNHL HN +NL   S+
Sbjct: 192 ------PQMSAMVASYDLNVDSNWYPNLGATNHLIHNLSNLSTRSE 184

The following BLAST results are available for this feature:
BLAST of Moc06g09380 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147537.17.4e-2484.72uncharacterized protein LOC111016442 [Momordica charantia][more]
KAA0048297.11.3e-1235.52Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK10642.11.3e-1235.52Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYJ95829.18.4e-1229.67putative copia-like retrotransposon Hopscotch polyprotein [Cucumis melo var. mak... [more]
KAA0036760.11.9e-1130.09putative mitochondrial protein [Cucumis melo var. makuwa][more]
BLAST of Moc06g09380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D2M13.6e-2484.72uncharacterized protein LOC111016442 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A5A7U2336.3e-1335.52Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3CH976.3e-1335.52Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3B9Z04.1e-1229.67Putative copia-like retrotransposon Hopscotch polyprotein OS=Cucumis melo var. m... [more]
A0A5A7T0779.1e-1230.09Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
BLAST of Moc06g09380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g09380.1Moc06g09380.1mRNA