Moc06g09070 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g09070
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	THO complex subunit 6
Location	chr6: 6639640 .. 6649407 (-)
RNA-Seq Expression	Moc06g09070
Synteny	Moc06g09070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCGGACGCGACGAATTGGGACGAAGATGCCTACAGAGAGAGTATTTTCAAGGAGAGAGAGGTGCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTGGTCCCGAGACAATCGTGGTCGCCTCCAGTGATGGATCCATTGCCTCTTATTCTATCGCTTCCTGCATCTCTAAGCTGGTAATTTTCTAAATTATTTTTAATCTTATGCTCATTTTTATTTTCTACCCGTATTTGAACGGTGTGGAATGTTTAAGGAGGTTCTTCGAGTGCTTCTTTGTCCAGATTATTTGGAAGATGTATTTTCTTTTATTTTTTGTTGGATAAGAAACTAATTTCACTGAATAAATTAGATTACAAGAGGGAGGGGAGGAAAAATTGAAGTTTGAAGCCAAGGAAGATTTTAAGAGTTCTTCTAAATGGCAGGAAGAGAGCTTAAATGATAATTACGGAAATAATCACAAAACTTGAATCAAGTAGGAGCAAGAATGATATTGTCCAAAAAACAGTCAAAAGACTTTTCAAGGTGGCTCAAGAGACTATTACAACCTTAAACAGGATATGTTCTATAGATTGTACCTCTGTGTCGTTGGGTTCTAAAGTGGCTAAACAGACTATTGTTTCTCCTAATCCACAAATGCACAAAAATGCTATAGCTAGCTGCAACCAAAGGATCTTATTCCTCTTAAAAGGATGAGCATCGAGAGTGAGAGAGAGGAGGTCCTTCGTAGGACATTGAGAACCTTTGGAAGAGTGGATATAGGACGTACCCAACTAATGGACATCCAAAGAGACATCAGACTTACCATAATGAAGTTCCTCCAAAGAGCTTCTCTGGGTAGTTGGATTTGACTTTGAAAGGTTCATTATTTTTTCTTATTCATTGCTTCATAGTTGTTACTTGTGCTCAATGTAGATATTCACGATGTTATAAAGGTCGATCAAATTGTTAAGGAATTAGGATTATAGGATTCAAATTCTTTCCATTTCCAAATTGAAACTTAGTTTTAATGGTTTATTTTATGATCGCCCAAGTCCATCTCAAAATTTTATCACGAGCTGCCCAGTACTTATCACTTCTTACAATTGATTGATTCAAATGATATTTAATTAATGAAGCAAAAGAAGTTAATTTTTGTGTATTTGCTGTTCAGTACTTACCATCTTACGAGGTTTATTTTATGATCACTGAAAAGTTCCTCTTTCTTCTTGATTGGTAATTTAGTAGTTCTGGACTAGGTATGTCGTGTGTTGTATTTCTTTATAGTTTAGTACTTCAAACTCCTATCCTGATTACACCTCTTTTTCATGCCTGTTTCAGCATTTTGGTTATAGCAATGCTAAAAGGCAAGTCCATTTGATCGTTTGTTCTCAATTCATTTCTAAATTTCGTGCTGCAAACTTGTACTTATGGTTCACTTTGTGCCTTACTCTAGTTTTCTGGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCATGATGGGCCTGCATATGATGTCAAATTTTACGATAGTGGCGACAATACTTTATTACTGAGGTTTCTCTCTCTCTCTCAATACTACAATAGTTTGAAGACGTTACACTTGTTAGATGATTTCTTTTCTCTTTCATTTCTTGACAATTTTTTTATTGTTCCATATTCTTGTGAGATATTGGCTATTTTTCAGTTATCTCGATGCTGATTCTAATGTTAATTTAAATATGAATGAATTTGTATACTTATTAATTAACTAACTTAATAATGAGGCAACATTATAGTTTGGTTTAGAATTAGTTTAGTGTTATTTTCAGAAATTTAGAACCAGTTGGAGCAGAATACAGTTGAGACCGATTGGTTGTTTTGTGCTCTACACTGTTCAACTAAGTTTAAGTTCCGGTTGATTTTCTTGCAAAATGCAAGAACATGCCAAGTTCGACCATTCTGCTTAGTAGTTCTTTTGTTGGTGACCCATCATGACTATGTCTCTAGATGATGAATCCATTAGGTACTTGTTGGATCTTTAATACATAAATTGCCTAAAGTCTGTACCCATATTTTTCTTAAATTTATTTGACTTGTACTTGTTTGAGCTTCAACGACTCCCTAAATGCTTTGATTAAATAATAAAATTATACCTACAGCATGTAAACTTAAACGGCAAGTTGCATGGAAAACTTGCACTGGTCTTGATTAAAATATCTGATTAGCCGTGCACAACATTTATAGCTGTGGGGACGATGGTCACATTCGAGGATGGAGGTGGAGAGAATGTACTGATATAGAGATGCCTATTTATTTCCAAGGTAATAGTTTATCGTCTCTTATCTGTAGTTTTATAGGTTTCGTGACCCCTTGAGCAGGGGCTGCATTTTATTTTATAGGTTTCTTTGGCTGTTTGGAAATTCTATTTTCTTGTTGTTTTCTCACTCCTTTAAAATTTAGGTTTTGACTTGGTGTATTGTTTTAATTGCTATAGTTGCTATAATTTCTTCTTTTCTTTCTTTTTATTCCAGGTAGTCATATTGAGCCTGTCATGGACCTGACGAATCCTCAATACAAGTAGGTTAATCACAAATATTTGATATTTTTTCCTTAATTTTTCTTAGTATTCTTATTCAACCTGTAGTTGACCTGGTGGATTCTCAAAATGAGCTGGTTGCCAAAAAATATATACACTCTACTATGTGCATTTATTCAATTTAATATCCCGTTCATAATATTATACAAAAAGGAGAACACTGGTTTGCCTTGCTTTTATGGTTTCCTAATATTATTTTTTTAATTATTAATTTTTTTTATGAATAAAAAACAAACGTTAATACTTGATTTATGCATCTGGAACCTTCCATTTCGAAGATCAATCTCAATTCTCAAGCATTGTCCTTTTGACTTCTTAATTAGAACTTTATGTAATCATCTAGATTCTTAATACAGCAGCCACGCTTGGAAGATGGTTAACATATAATGCAGAGATGCTTTTATTATTTTCTATAGATTTTATGACTTATGTTTCACCTAATTTAATATAGACTTTACGATGTAACTTTATACTTGACTTATCTCATATTTATAAAAAAAGTAGACTATAGAATAGATATGGATTTATTTTTTCTTAGTGCACTTGATCATCTTTATTACTCATTCTTTTTAAATGTATCTTATTGCTGTCTTCTAGAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGTTAATGGATCTGTTATTTTCCCCACTTATTCTATGACGCTGATGTTGCTAATTTAGTCCTCAAAAAAAAAAAAAAAAAAAAGGAAAAAAGATGAGGTGATATCTTGTTTTATTTTACAGGGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATCTGGTATGTGTATTTTGAGGTGGATGAGTGTAATTAATTGTAAACTTTCCAATCGGATTTTTTACAGCGAATAATTAAGTTCTTCCTAAAACTTACATAGTTTCTGCCTTTTGTATTTAAAATTTTCAGGAGAGCTGTAAAATTAAAATGGTTTTTAAGGGGCACTCTGATTACTTGCATTGTATAGTTGCCCGGAACACTGTCAACCAAGTACGTCTTTCCTTCTTTTCCTTGGTTATAATAGATTTCGATCTCCATTTCTACCTCGACCCTCTTTGAATTCTGTTTAGACTGCATAGTTTGTTCTTTTGTCTTCAGTGCGGTCGTCCTCCAGGCAGGTAAACTAGTAATGAATAGGAAAGGAGTGTTACTTCAAGGGTGTACACTGGCACAGATAAATGGGAATAGGAAACCTAGTAGATGCATATCCTTAGTTACTTCATCGTCATGAGACACAAACACAAAGCACAACAAATAAAGTGACTCAATAAAAATTACAAGCACCCTTTTCACATGGTAGATATGCATATTGATATCCCCCCTCGCAACCCTCTGTTGCTGTGGGTGGGGGCACACGCTGGCCTCCCGTGCGCACCGTCGCACGGATGGCTTAAATTTGTGTCCTCGGCGCCAACAGGCGCCATGCTACGGCAAAGAGAACTTCCTACTCTCCTCAGAAACTAACTTCTCCCCCCAACACGCACACACCCCACTATCCTTCACAACCTGAGTCTTAAGTAATTTGACTCACCACATAGTTGCTGGAAGATGTGTCTTCTAACTAACTTCTATGGCATCTCCCCATCATCTCATTTACTGCCTCCAGCCTCGATTTCCTCATTCTTGTAAGTGCATGAATTGTGAATCTGTTACTCTGTCAACGACTTTTATCTTTAATTAATAGTTGGTATGCAGTTAGTAGAGTATGGGATTCTCCTGAGCATCAGTGTAAAGCATGAAATTCTTGAGATTTAGTGAGATTGTTTGCCTAATACTCTCTCCATGTTCTGCCACCAAGCATTAGTATTATACCGATTAGGTGCTACTAATGAAGTCCTGCAGCCAAAAGGGAAGACACTAATTTTTATTTTTTTTTCTGTCCAATTCTTCAAAAAATTAATTATTATGGCTTCATTTGGTAAAGCTTTTGGCTTTAGACTTTAGTTTTATGTTTCGAAACATGTGACCATCATTAGTTTTCTGAACTATACTTTTCATGTACTTCCACCTTATTGTTTTCACACCTTGAATTTCAGATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGGTATGTAAATTATTTATTTATAATATATATGTCTAAAGCAGAAGGCCATGCATCAACTTCAATCATTTCCTACCTGCACTTGTAGCATATTTAATGCTAAATTCTATTTTAAAAATCGTAAAGTTGTTGAGCAGGAACATAGTTTATTATAGACTATAGTGGTTAAAACTTCTCAAAGAGACCACGGGGTTCGAATTCTCTTTGACTATCTGTCTGTCAATCTGCTTATAGTCTCTACTTTCTTAGCAGTAAATTTTGGTTGGGAGATTTTTTGGTATAAGTATATGAATTTTAAGGTATCTTATACGTGTTTATACTATCAAACCAGATTGCAAGAGTGGAAAGTGCATCCAAGTAATTGACCCAGCGAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTATTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGTGAGTATTTACTTAATTATCAGTATATTCCTCCATGGTGATTTGGATTTGAGTTTTTCTGCAGCTGTGCTCTTATTTTGTTATTTGGCCTGTTTTCTATTCTTCATCATTCTTAAAAAAAGCTATTTTTCTTCTTTTTTTTTTTAATAATTGGAAAAGCTTTTTTTCTTCTTGAAGGAAAATATTTGGTAATGGCTCTATATTACTTTGTTGTTTGGATCCACCACTGGATTCCAAAAATCCTACTTATTCAGATTTCCTTCTGTTAATCCTCCCACTTTAGCTGACTTATTCTCCATACTAATCTTCAAACCAGAGACCATCTCAAGCAAATTCGGCACTTTCAACTATATATTGGGTTATAGGAGAGGAACTTTCTGTCCCCATTTTAACTTTCTTTACTTATTTTACTTAAAAATTTGAAATCTAATTTAGTACTTTTTTTTGTTCATCTATTTTTTTCCCTTCAATTAAATAAATGTAGGTTTTAAAGAATATTCAAAATGGTACAATATAATATAAATGTTGTATTTTTCATTTTACTATTTTTTTGTATGGTTCCATTTTGTCTTTTATTTTTTTAGAATAGAAAGATCATTTTTTTCCTTGGGACTATAATATACTAATTAATAAACCTTTTGATTTTCCAATAAAATTTTTTAATGTTGTAAACAAGTAATACTAATCATCCATAACTAAAAAATCTTTGTTTTCAGTCAAATCATTTATATACAATACTCATAAAAAACCAATTTATTAATGGGGTGATAAAAACTATGTCAGATTTATCATTCCGATACTCTAACAATTAAGTAGGTAATTTTATTAATCAGTATTAATTTAATACATAATATTCATAATGATACCAGGAATGCTTCAGGGCGTCCCAAGATATGTTTTCAGTTATTGCTATACAATTACAACCCGTCTTTGCTCAATTGATACAAAACACACATGCTTTAGCACCTAGTATAACGGCCCCCGGTGTAACAACAAGCACCCGTTTGACTTGGGGGTGGTGATTTAGTGGCAGTGGGTGGCAAAGTTGCTCTGTTACCCCTATTCATTAGGAACCACATATTTTTTGGTATATCATATTCATGCATTTATGATTCATGTGACGGTATTGATACTCTTTAAAGGTGTTCTATTTTCTTGTAGCTCGCGTTTGATACTGGATAAAACAAATCTTAGTTTTCGTTTCCCTCGTGATAAATAAATATAAAATTAAATTATAAACTAATTTCATTTATATAGTTTGGTGACATTAATTTGAACTCATTAATAAAATTTATTTTCTTATAGCAAAATACAACTAGAACTTTACATGCATGGTCCGTGTTATGGACTAGTAGATGAAAAAATCATAGGTGAAAGGTTGACTAGGTTTCATTCCTGAGAATATTTCTCTTGCTGAATTGGTGGGTATAATGGAGTGATATTTACATCTGCTGCATTTTATTTTAGGCCTGTGCTGACGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCGAAAACTTTGACCCGTTCTTCAATGCAGGATATGGCTTTTTGTGATAATCAAGTGAGTGATTCTCCTTCTTGAACTGGTTATACTTTTAATTAAGTGACACTAGCCTGCATTTTGGTCTTGCTCAGGAATCTGTCATCATGTTTTCATCTTTCATTTGATCATTAGACAAGAAATATAAGATTTCCTACTTGCTTGTATGATTTAGCGCAACAGCAAACTCATTTTTGCATAATTATTGTTGACTTACAAGTTAAAGAAGCATGCACATGACCGTTATACGACATGAGCCTGCGAGAAGTTATCTAAGAGCACGAATATGTCAAATATTGTTATCTTAGTATATCTTGTGTTAGATCAGATTATTCTGACACCATTGTATGTTACTGTTGTCTCTCCGTGTCCAGATATTAGGCATTGGAGCAGAGCCATCACTAACCCGGTTCGACGTAAATGGATCAATTCTTTCACAAATACAATGTGCCCCTCAGTCAGCTTTTTCAGTTGCCTTGCATCCATCTGGCGTATGTTTAACTTGATTCCTTTTGTCCTCTGGAACTTCTTCATTTCTCTCAATTTTAGCGTAACATTATGGGAAGATTAGAACTTAGAAGAGCAACTAAAATGGTGTTCCATTTTGTTTTTATGCATATCCGTGTAATCTCATTCATTATATAGTCTACTACCAAATGAGCAACAAATTCAATCATGTAACAATCTGTTGCTATTTCGACCTTTCATTTTCCTTGGACTTTCATCCAAGCCTTAAATTGAAGTCCTAAGAGATAACTTGTCAATGATATGCTATGAATTCAAGGATCTTGCTTAGGTTATCTTTCCTCTATGCTTCTCTCACTCTAGGATGGTTTATTTGTCGGTTCAGGTCGCAGCAGTCGGAGGCTATGGTGGTCTCGTGGACGTTATCTCACAGTTCGGAAGTCATTTATGCACATTCCGGTGTCAATACAGATAAATCAATATAACCAATTGCTTTGCTGCAGGAGTTGGAGGATGTGCTTGGAAATTCGAAGGTGCCTGCTCCCAACTTACCAATGAGTTCCTACAGTTGAAATACGATTTCTTTTCTTGGAAGAAAAATTTTTAGTCGCTGTATCTTGTGGTTCTTCAATTTTGATATTTTTTAAATTGACAACATATATGCACTTTTGATTTATAACCTAATAGAATCATGGTAGTTTTTTTTAAATAATATTTACGAGTATTCAGGTTAGCTTGCACACGTCTCGACTAATTTCATAGGACAACCATATGACTCTACTATATTGAAATTGATTCTTAGATCGGTGGCTATTATGGGGTTTGAACTCATTCCTTCTAAACCCTTTTGATTTATATTCGTCTAAACCGAGTCAACTTATGATGGTTAGAATCATTCTAGTTTGTGAAAGAAAGAAGAATGTTCTCTTTTTTTTTTTTCTTTCTGGTGGGCAGGATTTGAACACACCTTAATCAATTGAGATTAGCTTAACGGAATTATATAAATAACATGGAGAACCTCAGTTGATATTATTATTTATCATAATTTTCAAATTTCAATTCTGAAGTAATTAGTGTGAATATCTTGTGGTCGCAGGAGTTGGATCTCACAAGACCACATGAAAATTCTATTCGCTGGTTCGAAGTTATTAGGCATAAATTGAATTATTTTCAAAGTGAGCAACATTAGAATAAAAATTTAATTTTAATTTCATACAGTTTCAAATAAACAAATTAAATTTCTGTCATTTTCGTTGGTTAATTTTTTGTTTTTTTGTAAATCGTTCTTAATTTTTAAGAAATATGTGTCTTTCATAACATTTTCTGCTCCTCGTTTTCAAAATTATGTATAAATGTTTAAAATAATAAAATCAATTTTTTGTTTCTTGTTTTTATTTCAACTTTTTTCAAAACACAAGTAAAAATGGTATTTTACCTTTAATGACTTAGAAAATACATAATAAATATTAAAAAATTAAAATACACAATAAATATTAAAAAGTTAATATAATGTAAAAATTTTAAATATTTAATTTACCAAATACACTTATATATTTTTTCAATGAAAAATAATTATCAAACCTAGTGCTTTTCTTAAAAATAGAATGCCATAAATTCTATTTATATTGATCCCAGTAAAGTTTTAAAATAAATGGAACTTGTACTAAAAAGTAATAATAATAAATAAATGGAACTGAATAGATGTAATAAAATATTAACACGATCTTTTTTAAGTTTTAACCCTTTTTTTCAATGCCTTTATTATTTTTAAAAGATAGGAAAACATATCCATTTTCATAAAAGAGATATAAATTAAAATAACATCGAAATTTTCATAAATCAATCACATTACGATTTTGATGCTCAAGCAAAAACTGTAATCAAACTTTTTCTTCTTTTGTAAAATCCCAATTTCAGATCAAAACCCTAAAAATGGATTTTGAAAAAGCAGCAGCAGGAGAAGACAAAGACAAAAGTAAAACTGCGTGAAATTTGGGGAATGGACCATGGTCATGGTCAACTACGAACTTTCGGCTCTCTCTCAGCGATCTGTTCGCCTTTCATTGGATAATCCACTTCAATTTCTCACTACCTTGCGGCGTAAGCTGAAATCTCCATCGGCCACCGACGAGGGTTCCATTTCGATCGATCCCTTTGGAGTCCACTTCCCATGAGGTGAATTTTTGGTGCGACAGAATCTCCTCGAGTGTTTCGAAGCTCTAAAACCTCGGATCCGGCGTCTAACTATGGAGGATTTCGAGTCCAAATCCAAATCATATGGGGATGGGAGAATGCAGATTGTGAACTACTACGGAGACGAAGCCAGAGAACCCCCTGCTTCCGGCGGAATGGGCGTGCAAGATTTCCGTTGTTACAGTGCGTCGTATGCTTCGCAAACGCAGATGGGAAACGATTTGAAGCTCAAGAAAGGGAAATCGACGAACGGATTTTCGTCCAAGAGCTGGAGTTTCAGCGATCCGGAGATGCAGAGAAAGAGGAGGGTCGCGAGCTATAAGGTTTATACTGTGGAAGGCAAAGTCAAAGGTTCTTTCAGGAAGAGCTTCAGGTGGCTTAAGGAAAGATGCTCCCGAGTGGTCTTTGGATGGTAG

mRNA sequence

ATGTCAGCGGACGCGACGAATTGGGACGAAGATGCCTACAGAGAGAGTATTTTCAAGGAGAGAGAGGTGCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTGGTCCCGAGACAATCGTGGTCGCCTCCAGTGATGGATCCATTGCCTCTTATTCTATCGCTTCCTGCATCTCTAAGCTGCATTTTGGTTATAGCAATGCTAAAAGTTTTCTGGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCATGATGGGCCTGCATATGATGTCAAATTTTACGATAGTGGCGACAATACTTTATTACTGAGCTGTGGGGACGATGGTCACATTCGAGGATGGAGGTGGAGAGAATGTACTGATATAGAGATGCCTATTTATTTCCAAGGTAGTCATATTGAGCCTGTCATGGACCTGACGAATCCTCAATACAAAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATCTGGAGAGCTGTAAAATTAAAATGGTTTTTAAGGGGCACTCTGATTACTTGCATTGTATAGTTGCCCGGAACACTGTCAACCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATCCAAGTAATTGACCCAGCGAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTATTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGCCTGTGCTGACGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCGAAAACTTTGACCCGTTCTTCAATGCAGGATATGGCTTTTTGTGATAATCAAATATTAGGCATTGGAGCAGAGCCATCACTAACCCGGTTCGACGTAAATGGATCAATTCTTTCACAAATACAATGTGCCCCTCAGTCAGCTTTTTCAGTTGCCTTGCATCCATCTGGCGTCGCAGCAGTCGGAGGCTATGGTGGTCTCGTGGACGAGTTGGAGGATGTGCTTGGAAATTCGAAGAATCTCCTCGAGTGTTTCGAAGCTCTAAAACCTCGGATCCGGCGTCTAACTATGGAGGATTTCGAGTCCAAATCCAAATCATATGGGGATGGGAGAATGCAGATTGTGAACTACTACGGAGACGAAGCCAGAGAACCCCCTGCTTCCGGCGGAATGGGCGTGCAAGATTTCCGTTGTTACAGTGCGTCGTATGCTTCGCAAACGCAGATGGGAAACGATTTGAAGCTCAAGAAAGGGAAATCGACGAACGGATTTTCGTCCAAGAGCTGGAGTTTCAGCGATCCGGAGATGCAGAGAAAGAGGAGGGTCGCGAGCTATAAGGTTTATACTGTGGAAGGCAAAGTCAAAGGTTCTTTCAGGAAGAGCTTCAGGTGGCTTAAGGAAAGATGCTCCCGAGTGGTCTTTGGATGGTAG

Coding sequence (CDS)

ATGTCAGCGGACGCGACGAATTGGGACGAAGATGCCTACAGAGAGAGTATTTTCAAGGAGAGAGAGGTGCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTGGTCCCGAGACAATCGTGGTCGCCTCCAGTGATGGATCCATTGCCTCTTATTCTATCGCTTCCTGCATCTCTAAGCTGCATTTTGGTTATAGCAATGCTAAAAGTTTTCTGGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCATGATGGGCCTGCATATGATGTCAAATTTTACGATAGTGGCGACAATACTTTATTACTGAGCTGTGGGGACGATGGTCACATTCGAGGATGGAGGTGGAGAGAATGTACTGATATAGAGATGCCTATTTATTTCCAAGGTAGTCATATTGAGCCTGTCATGGACCTGACGAATCCTCAATACAAAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATCTGGAGAGCTGTAAAATTAAAATGGTTTTTAAGGGGCACTCTGATTACTTGCATTGTATAGTTGCCCGGAACACTGTCAACCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATCCAAGTAATTGACCCAGCGAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTATTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGCCTGTGCTGACGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCGAAAACTTTGACCCGTTCTTCAATGCAGGATATGGCTTTTTGTGATAATCAAATATTAGGCATTGGAGCAGAGCCATCACTAACCCGGTTCGACGTAAATGGATCAATTCTTTCACAAATACAATGTGCCCCTCAGTCAGCTTTTTCAGTTGCCTTGCATCCATCTGGCGTCGCAGCAGTCGGAGGCTATGGTGGTCTCGTGGACGAGTTGGAGGATGTGCTTGGAAATTCGAAGAATCTCCTCGAGTGTTTCGAAGCTCTAAAACCTCGGATCCGGCGTCTAACTATGGAGGATTTCGAGTCCAAATCCAAATCATATGGGGATGGGAGAATGCAGATTGTGAACTACTACGGAGACGAAGCCAGAGAACCCCCTGCTTCCGGCGGAATGGGCGTGCAAGATTTCCGTTGTTACAGTGCGTCGTATGCTTCGCAAACGCAGATGGGAAACGATTTGAAGCTCAAGAAAGGGAAATCGACGAACGGATTTTCGTCCAAGAGCTGGAGTTTCAGCGATCCGGAGATGCAGAGAAAGAGGAGGGTCGCGAGCTATAAGGTTTATACTGTGGAAGGCAAAGTCAAAGGTTCTTTCAGGAAGAGCTTCAGGTGGCTTAAGGAAAGATGCTCCCGAGTGGTCTTTGGATGGTAG

Protein sequence

MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIASCISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDELEDVLGNSKNLLECFEALKPRIRRLTMEDFESKSKSYGDGRMQIVNYYGDEAREPPASGGMGVQDFRCYSASYASQTQMGNDLKLKKGKSTNGFSSKSWSFSDPEMQRKRRVASYKVYTVEGKVKGSFRKSFRWLKERCSRVVFGW

Homology

[Close]

BLAST of Moc06g09070 vs. NCBI nr
Match: XP_022147721.1 (THO complex subunit 6 [Momordica charantia])

HSP 1 Score: 738.0 bits (1904), Expect = 5.3e-209
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC
Sbjct: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA
Sbjct: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD
Sbjct: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 352

[Close]

BLAST of Moc06g09070 vs. NCBI nr
Match: XP_038880261.1 (THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex subunit 6 isoform X4 [Benincasa hispida])

HSP 1 Score: 694.5 bits (1791), Expect = 6.7e-196
Identity = 327/352 (92.90%), Postives = 339/352 (96.31%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGSIASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKLHFGY N +S LAAEPHCFLQGHDGPAYDVKFYD+G+NTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYGNTRSLLAAEPHCFLQGHDGPAYDVKFYDNGNNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           ECTDIE+PIY QGSHIEPVMDL NPQYKGPWGALSP+PENNAIA+DAQ GSIFSAAGDSC
Sbjct: 121 ECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSPMPENNAIASDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES KIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDM FCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 352

[Close]

BLAST of Moc06g09070 vs. NCBI nr
Match: XP_008450878.1 (PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subunit 6 [Cucumis melo var. makuwa] >TYK10060.1 THO complex subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 686.0 bits (1769), Expect = 2.4e-193
Identity = 321/352 (91.19%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEPHCFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           +CTDIE+PIY QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGL+D
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLID 352

[Close]

BLAST of Moc06g09070 vs. NCBI nr
Match: XP_004144008.1 (THO complex subunit 6 [Cucumis sativus] >KGN66260.1 hypothetical protein Csa_007648 [Cucumis sativus])

HSP 1 Score: 676.4 bits (1744), Expect = 1.9e-190
Identity = 317/352 (90.06%), Postives = 334/352 (94.89%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEP+CFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           +CTDI++PI  QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 DCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRS+SVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 352

[Close]

BLAST of Moc06g09070 vs. NCBI nr
Match: XP_038880257.1 (THO complex subunit 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 674.1 bits (1738), Expect = 9.3e-190
Identity = 318/350 (90.86%), Postives = 332/350 (94.86%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGSIASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKLHFGY N +S LAAEPHCFLQGHDGPAYDVKFYD+G+NTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYGNTRSLLAAEPHCFLQGHDGPAYDVKFYDNGNNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           ECTDIE+PIY QGSHIEPVMDL NPQYKGPWGALSP+PENNAIA+DAQ GSIFSAAGDSC
Sbjct: 121 ECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSPMPENNAIASDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES KIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDM FCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGL 351
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGV++     GL
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVSSSRSSWGL 350

[Close]

BLAST of Moc06g09070 vs. ExPASy Swiss-Prot
Match: Q8L4M1 (THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.4e-124
Identity = 206/354 (58.19%), Postives = 275/354 (77.68%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLN-GGPETIVVASSDGSIASYSIA 60
           M  DATNW+ED YRESI KERE++TRTVFRTAWAP      P+  VVASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISK-LHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWR 120
           S +S+   FGYS  +  + AEP   ++ H+GPAYDVKFY   ++ LLLSCGDDG +RGW+
Sbjct: 61  SLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDDGRVRGWK 120

Query: 121 WRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGD 180
           WRE  + ++ ++ + +H++P+++L NPQ+KGPWGALSP+PE NA++ D Q GS+F+AAGD
Sbjct: 121 WREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGD 180

Query: 181 SCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVID 240
           SCAYCWD+ES KIKM FKGHSDYLH +V+R++ +QI+TGSEDGTARIWDCK+GKC++VI 
Sbjct: 181 SCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIG 240

Query: 241 PAKDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFC 300
            ++DKK +   S    +ALD SESWL C  G++L++WNLP+SE +      + +QD+ F 
Sbjct: 241 -SQDKKSRLRVS---SMALDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFD 300

Query: 301 DNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           + QIL +GAEP L RFD+NG++LSQI CAP S FS++LHP+GV AVGGYGG+VD
Sbjct: 301 EKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVAVGGYGGIVD 350

[Close]

BLAST of Moc06g09070 vs. ExPASy Swiss-Prot
Match: Q86W42 (THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.2e-26
Identity = 83/314 (26.43%), Postives = 149/314 (47.45%), Query Frame = 0


Query: 31  TAWAPSLNGGPETIVVASSDGSIASYSIASCISKLHFGYSNAKSFLAAEPHCFLQGHDGP 90
           T ++ S++   + +   ++ G IA +S++S +S      S AK   + +P    Q HDGP
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSSALS------SEAKE-ESKKPVVTFQAHDGP 85

Query: 91  AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGP 150
            Y +   D      LLS G DG ++ W W E               +   +L   Q   P
Sbjct: 86  VYSMVSTDRH----LLSAG-DGEVKAWLWAEMLK------------KGCKELWRRQ--PP 145

Query: 151 WGALSPIPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNT 210
           +     +PE NA+    +  S+  A GD   +  DLE+     V +GH+DY+HC+  R  
Sbjct: 146 YRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCLALRER 205

Query: 211 VNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFS--CIRCIALDASESWLACAD 270
             ++++G EDG  R+WD ++ K +Q I+  K ++     +   I C+A D+   W+ C  
Sbjct: 206 SPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGG 265

Query: 271 GRSLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAP 330
           G +L++W+L SS   +    R+  + + F  + IL  G    + ++ ++G + +Q+  + 
Sbjct: 266 GPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSS 311

Query: 331 QSAFSVALHPSGVA 343
               S++L+    A
Sbjct: 326 PGLLSLSLNQQPAA 311

[Close]

BLAST of Moc06g09070 vs. ExPASy Swiss-Prot
Match: Q5U4D9 (THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.8e-25
Identity = 81/314 (25.80%), Postives = 146/314 (46.50%), Query Frame = 0


Query: 31  TAWAPSLNGGPETIVVASSDGSIASYSIASCISKLHFGYSNAKSFLAAEPHCFLQGHDGP 90
           T ++ S++   + +   ++ G IA +S+++ +S      S AK   + +P      HDGP
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALS------SEAKE-ESKKPVVVFHAHDGP 85

Query: 91  AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGP 150
            Y +   D      LLS G DG ++GW W E               +   +L   Q   P
Sbjct: 86  VYSMVSTDRH----LLSAG-DGEVKGWLWAEILK------------KGCKELWRRQ--PP 145

Query: 151 WGALSPIPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNT 210
           +     +PE NA+    +  S+  A GD   +  DLE+       +GH+DY+HC+  R  
Sbjct: 146 YRTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAFTRALRGHTDYIHCLALRER 205

Query: 211 VNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFS--CIRCIALDASESWLACAD 270
             ++++G EDG  R+WD +  K +Q I+  K ++     +   I C+A D+   W+ C  
Sbjct: 206 SPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGG 265

Query: 271 GRSLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAP 330
           G +L++W+L SS   +    R+  + + F  + IL  G    +  + ++G + +Q+  + 
Sbjct: 266 GPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSS 311

Query: 331 QSAFSVALHPSGVA 343
               S++L+    A
Sbjct: 326 PGLLSLSLNQQPAA 311

[Close]

BLAST of Moc06g09070 vs. ExPASy Swiss-Prot
Match: Q6AY87 (THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.8e-25
Identity = 81/314 (25.80%), Postives = 146/314 (46.50%), Query Frame = 0


Query: 31  TAWAPSLNGGPETIVVASSDGSIASYSIASCISKLHFGYSNAKSFLAAEPHCFLQGHDGP 90
           T ++ S++   + +   ++ G IA +S+++ +S      S AK   + +P      HDGP
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALS------SEAKE-ESKKPMVTFHAHDGP 85

Query: 91  AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGP 150
            Y +   D      LLS G DG ++GW W E               +   +L   Q   P
Sbjct: 86  VYSMVSTDRH----LLSAG-DGEVKGWLWAEILK------------KGCKELWRRQ--PP 145

Query: 151 WGALSPIPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNT 210
           +     +PE NA+    +  S+  A GD   +  DLE+       +GH+DY+HC+  R  
Sbjct: 146 YRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRER 205

Query: 211 VNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFS--CIRCIALDASESWLACAD 270
             ++++G EDG  R+WD +  K +Q I+  K ++     +   I C+A D+   W+ C  
Sbjct: 206 SPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGG 265

Query: 271 GRSLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAP 330
           G +L++W+L SS   +    R+  + + F  + IL  G    +  + ++G + +Q+  + 
Sbjct: 266 GPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSS 311

Query: 331 QSAFSVALHPSGVA 343
               S++L+    A
Sbjct: 326 PGLLSLSLNQQPAA 311

[Close]

BLAST of Moc06g09070 vs. ExPASy Swiss-Prot
Match: Q5XJS5 (THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.2e-24
Identity = 83/315 (26.35%), Postives = 143/315 (45.40%), Query Frame = 0


Query: 44  IVVASSDGSIASYSIASCISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNT 103
           +   ++ G IA +S+++ +S          S  + +P      HDGP + +   +S    
Sbjct: 23  LAAGNNYGEIAVFSLSAALSP-------DASERSQKPILNFTAHDGPVFSLLSTESH--- 82

Query: 104 LLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAI 163
            LLS G +G I  W W E         +             P Y+        IPE NA+
Sbjct: 83  -LLSAG-NGEISAWSWAELIKKSTKAAW----------TRKPNYE----TSLEIPEINAM 142

Query: 164 ATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTA 223
             + +  ++    GD+  +  D+E+   K V KGH+DY+HC+  +    +I++G EDG  
Sbjct: 143 IINPKDNNLIVGGGDNNIHIMDMETGTFKSVLKGHTDYIHCLSFKEREGEILSGGEDGAV 202

Query: 224 RIWDCKSGKCIQVIDPAK-DKKLKGHF-SCIRCIALDASESWLACADGRSLSVWNLPSSE 283
           RIWD ++ + +  I+  K ++  +  F   I C+A D+   W+ C  G SLS+W+L S  
Sbjct: 203 RIWDSRTNRPVHCIEVFKYEECARPQFGKWISCLATDS--DWMLCGGGPSLSLWHLRSMS 262

Query: 284 FISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSG- 343
             S        ++     + I+ +G  P ++     G++ +QI C+P S  ++AL+    
Sbjct: 263 PTSVFPLSGCQREAVSYQDLIMSVGEGPYVSHCLHGGTVKAQIPCSPSSLNTLALNLKNT 309

Query: 344 ---VAAVGGYGGLVD 353
              V  VGG    +D
Sbjct: 323 EHRVMTVGGSSHQID 309

[Close]

BLAST of Moc06g09070 vs. ExPASy TrEMBL
Match: A0A6J1D376 (THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.5e-209
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC
Sbjct: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA
Sbjct: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD
Sbjct: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 352

[Close]

BLAST of Moc06g09070 vs. ExPASy TrEMBL
Match: A0A5A7UQQ6 (THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001940 PE=3 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 1.1e-193
Identity = 321/352 (91.19%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEPHCFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           +CTDIE+PIY QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGL+D
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLID 352

[Close]

BLAST of Moc06g09070 vs. ExPASy TrEMBL
Match: A0A1S3BQ99 (THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 1.1e-193
Identity = 321/352 (91.19%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEPHCFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           +CTDIE+PIY QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGL+D
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLID 352

[Close]

BLAST of Moc06g09070 vs. ExPASy TrEMBL
Match: A0A0A0LWJ2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589670 PE=3 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 9.1e-191
Identity = 317/352 (90.06%), Postives = 334/352 (94.89%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEP+CFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           +CTDI++PI  QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 DCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRS+SVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 352

[Close]

BLAST of Moc06g09070 vs. ExPASy TrEMBL
Match: A0A6J1F6F8 (THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.9e-188
Identity = 314/353 (88.95%), Postives = 335/353 (94.90%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDEDAYRES++KEREVQTRTVFRTAWAPSL+G PE+IVVASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120
           CISKLH GY N KS LAAEPHCFLQGHDGP YDVKF+D+GDNTLLLSCGDDGHIRGWRW 
Sbjct: 61  CISKLHSGYGNTKSLLAAEPHCFLQGHDGPTYDVKFFDAGDNTLLLSCGDDGHIRGWRWN 120

Query: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180
           ECTDIE+PIY QGSHIEPVMDL NPQYKGPWGALSPIPENNAIAT+AQ GSIFSAAGDSC
Sbjct: 121 ECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSPIPENNAIATNAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240
           AYCWDLES KIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCK+GKCIQ++DPA
Sbjct: 181 AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKTGKCIQLLDPA 240

Query: 241 KD-KKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCD 300
           KD KK KG+FSC+RCIALDASESWLACADGRS SVWNLP+S+FIS+TLTRSSMQDM FCD
Sbjct: 241 KDNKKQKGNFSCVRCIALDASESWLACADGRSFSVWNLPASDFISRTLTRSSMQDMVFCD 300

Query: 301 NQILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           NQILG+GAEP LTRFD++GSILS+IQCAPQSAFSVA+HPSGVAAVGGYGGLVD
Sbjct: 301 NQILGVGAEPLLTRFDIHGSILSEIQCAPQSAFSVAVHPSGVAAVGGYGGLVD 353

[Close]

BLAST of Moc06g09070 vs. TAIR 10
Match: AT2G19430.1 (DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 )

HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-125
Identity = 206/354 (58.19%), Postives = 275/354 (77.68%), Query Frame = 0


Query: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLN-GGPETIVVASSDGSIASYSIA 60
           M  DATNW+ED YRESI KERE++TRTVFRTAWAP      P+  VVASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISK-LHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWR 120
           S +S+   FGYS  +  + AEP   ++ H+GPAYDVKFY   ++ LLLSCGDDG +RGW+
Sbjct: 61  SLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDDGRVRGWK 120

Query: 121 WRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGD 180
           WRE  + ++ ++ + +H++P+++L NPQ+KGPWGALSP+PE NA++ D Q GS+F+AAGD
Sbjct: 121 WREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGD 180

Query: 181 SCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVID 240
           SCAYCWD+ES KIKM FKGHSDYLH +V+R++ +QI+TGSEDGTARIWDCK+GKC++VI 
Sbjct: 181 SCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIG 240

Query: 241 PAKDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFC 300
            ++DKK +   S    +ALD SESWL C  G++L++WNLP+SE +      + +QD+ F 
Sbjct: 241 -SQDKKSRLRVS---SMALDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFD 300

Query: 301 DNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVD 353
           + QIL +GAEP L RFD+NG++LSQI CAP S FS++LHP+GV AVGGYGG+VD
Sbjct: 301 EKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVAVGGYGGIVD 350

[Close]

BLAST of Moc06g09070 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 115.9 bits (289), Expect = 9.1e-26
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 380 MEDFESKSKSYGDGRMQIVNYYGDEAREPPASGGMGVQDFRCYSASYASQTQMGNDLKLK 439
           MEDF  + + YGDG MQI  Y+G++       GG    DFR YSASY   T+  N   +K
Sbjct: 1   MEDF-GRQRPYGDGGMQIQPYHGNQ-------GG----DFRSYSASYG--TRENNIYDVK 60

Query: 440 KGKSTNGFSSKSWSFSDPEMQRKRRVASYKVYTVEGKVKGSFRKSFRWLKERCSRVVFGW 499
           K KS     SKSW  +DPE+QRK+RVASYK+Y VEGKVKGSFR SFRWLK+R ++VV+GW
Sbjct: 61  KEKSI--ARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

[Close]

BLAST of Moc06g09070 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 114.0 bits (284), Expect = 3.5e-25
Identity = 59/120 (49.17%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 380 MEDFESKSKSYGDGRMQIVNYYGDEARE--PPASGGMGVQDFRCYSASYAS-QTQMGNDL 439
           MED+  +S+SYGDGR   +  Y    R   P +  G G+QD R YS SY    T++  D 
Sbjct: 1   MEDY--RSRSYGDGRTSDLQQYSAHRRSDGPDSFSGNGMQDLRSYSTSYTDYPTRIPEDQ 60

Query: 440 KLKKGKSTNGFSSKSWSFSDPEMQRKRRVASYKVYTVEGKVKGSFRKSFRWLKERCSRVV 497
             KKG+S+   SS SW F DP++QRK+RV SY+ YTVEGK+KGSFRKSF+W+K++C++++
Sbjct: 61  NPKKGRSS---SSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

[Close]

BLAST of Moc06g09070 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 81.6 bits (200), Expect = 1.9e-15
Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 397 IVNYYGDEAREPPASGGM--GVQDFR--CYSASYASQTQMGN-DLKLKKGKS---TNGFS 456
           + NYY     EPPASG     V+ +    +  S   Q+Q  +  LK+KK KS    +  +
Sbjct: 1   MANYY-----EPPASGNRRDAVKGYNSGSFDDSAGDQSQTNDYQLKIKKSKSVPNADRAA 60

Query: 457 SKSWSFSDPEMQRKRRVASYKVYTVEGKVKGSFRKSFRWLKE 491
           S+SWSFSDPE +RKRRVA YKVY+VE K+KGS RKSF+W K+
Sbjct: 61  SRSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFKD 97

[Close]

BLAST of Moc06g09070 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-11
Identity = 49/126 (38.89%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 383 FESKSKSYGDGRMQIVNYY-----GDEAREPPASGGMGVQDFRCYSAS----YASQTQMG 442
           F SKS         I N Y     G+++   P +    V   R YS S    Y + T + 
Sbjct: 2   FRSKSCREETRSSSITNKYHCFSHGEKSESEPTNQQPPVM-MRSYSTSTYNAYQNPTIVR 61

Query: 443 NDLKLKKGKSTNGFSSKSW-SFSDPEMQRKRRVASYKVYTVEGKVKGSFRKSFRWLKERC 499
           +D    K K +N    K +    + E+QRK+RVASY VY VEG+VKGS +KSF+W KE C
Sbjct: 62  DDSN-NKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETC 121

The following BLAST results are available for this feature:

BLAST of Moc06g09070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147721.1	5.3e-209	100.00	THO complex subunit 6 [Momordica charantia]	[more]
XP_038880261.1	6.7e-196	92.90	THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex...	[more]
XP_008450878.1	2.4e-193	91.19	PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subuni...	[more]
XP_004144008.1	1.9e-190	90.06	THO complex subunit 6 [Cucumis sativus] >KGN66260.1 hypothetical protein Csa_007...	[more]
XP_038880257.1	9.3e-190	90.86	THO complex subunit 6 isoform X1 [Benincasa hispida]	[more]

BLAST of Moc06g09070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4M1	1.4e-124	58.19	THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1	[more]
Q86W42	5.2e-26	26.43	THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1	[more]
Q5U4D9	5.8e-25	25.80	THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1	[more]
Q6AY87	5.8e-25	25.80	THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1	[more]
Q5XJS5	2.2e-24	26.35	THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1	[more]

BLAST of Moc06g09070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D376	2.5e-209	100.00	THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1	[more]
A0A5A7UQQ6	1.1e-193	91.19	THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A1S3BQ99	1.1e-193	91.19	THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1	[more]
A0A0A0LWJ2	9.1e-191	90.06	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1F6F8	1.9e-188	88.95	THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1	[more]

BLAST of Moc06g09070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19430.1	1.0e-125	58.19	DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1	[more]
AT5G11970.1	9.1e-26	55.83	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	3.5e-25	49.17	Protein of unknown function (DUF3511)	[more]
AT3G13910.1	1.9e-15	49.02	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	1.3e-11	38.89	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 77..118 e-value: 1.4E-4 score: 31.2 coord: 238..276 e-value: 0.5 score: 18.9 coord: 150..185 e-value: 200.0 score: 2.5 coord: 188..227 e-value: 4.2E-6 score: 36.3 coord: 14..57 e-value: 170.0 score: 2.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 243..276 e-value: 4.4E-4 score: 21.0 coord: 193..227 e-value: 0.001 score: 19.8 coord: 84..117 e-value: 0.02 score: 15.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 195..236 score: 13.348998
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 84..117 score: 8.703868
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 10..154 e-value: 2.9E-10 score: 41.8
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 155..369 e-value: 2.5E-25 score: 90.9
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 454..497 e-value: 6.4E-25 score: 86.7
IPR042626	THO complex subunit 6	PANTHER	PTHR44411	THO COMPLEX SUBUNIT 6 HOMOLOG	coord: 9..354
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 195..227 score: 10.126507
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 24..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g09070.1	Moc06g09070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0000347	THO complex
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding