Moc06g08510 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g08510
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionABC multidrug transporter MDR2
Locationchr6: 6156798 .. 6163911 (-)
RNA-Seq ExpressionMoc06g08510
SyntenyMoc06g08510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGTCACACTACCATAGCGGGAACCCAAACATTCCACGACCTTCTCTTCTTGCATCCACGGAGCAATCCAGTGCCATTCATTGTCCAGATTTCCTATGGTCTAATGGCGCATTGTTGCGGTACAGGTTAAATTTTGATTTGAATCATCGCCGTAAATTTCCAGAGACATCGGAGCCTGCGGATTACCTGTTCAGGTTAGGTATCTCGGGTCTGTTTGTTCAATTATCTTTTATCGGTCAAGAAACTAATTCATCCGATTTATATTTAAACCCGTCCGCCAAATATCCAGAAGATGGGTTTGCCCTGGCAATCTGTGAATTTAGGGCTTATTAGTCGAGTTCGAGAAGAGAAGACAATCAATCCGTCTCCGATAGAGAGAGAGAAAGAGACACGTGTTGAGGTAACTTTGGTCAATTATCACAATACGGCGAAAAAGGAAGAATGGCAAATCCTCCATGGGTGAGAGCAATGTACTTGTCGTCTATCGATTTCACTTTTTGGATAAAAGCGGTGTTCGAATACGGCGAAAAAGGAAGAAGGGAAGATATAGGTACTCATTTAATTTTAAAAATCACTAATGACTTTTCACTTGTTTGAAACTAAATATTTAGAATAACAATTTGATACAACTTTAACTTTAAGATTTTCTGTTCTAATGTTTATAAATTTTATTTTTTTGTCATGTTTTAATTTTTTTCGAACTCTTATCAAACATTCTTTTTCCATAGCATATAATGTTAGTTTTGTTTTGTTTTTTTATCTAAATATGTTAACTTTTTTATAATAGTAAAACTAGTTAATTAAATGTATTAAACATAATTTTATTATTAGAAAATAATAATTTAAAAGTTTTTCTGTTACAATTTTGTTCCTTCTCATTAATAATGAAAAGTTCGTATCTTGTTTAAAAAAATTAATTTCAACGGTTTATTTATATGCCTTTGCCTTTGCATGCGTTAAAAATAGAAAAGAATAAATGATTATTGGCTGAATCTACCTCTCAACTTAAGTTATATTCGTCGATTTCTTTCCCATGCATATGAAGCTGGTAGGGTATATTCTTCAAGTTTTGCTGTAAAATTTAGTTGATTGTTCTCTTTACTCTACAGGGCATTGGGGCAGTCTGCCCAGAGAAAACAATCCTTATTGCTGGTAACAGTTGGTTCCATCAATAGCGTTGTTGTCTCTGTTATTGAAAGTTTCTACAACCACATTTCAGGTAAATAATAGTTGCATAACAACATTCATTTTTTTATTACATGTTCAGTTAGGAAGCAAAATTCATTCATAATCTTGACTAAACGTGTAGGAAACATTCTACTAGATGAGGGTGACATAAAAACATTGGAGTTGAGATCATTAAGGTAGCAGATAGGGCTGGGAGCCAGAAAGCTTCACTTTTTGTGAAGACCATCCACGAAAATATTATTTTGGGTGATGACGAATGCTCATTCATTCATTACCAAACTCTGAAGGTTGGGGCATATGGCAATCAGGTTAGGTATCATCTCATTGCTTCTTTGTTGCTTCTCTTTTAGATGTTTTTGTATCTAAAGTATCTTTAATACTAGTTTTGTGGTAGTCTAATTTAATAGGTATTTCATTATTTTCCTTCATTCCTTTTTAATTTTGATTCTTTTGACTCGTTTGTTTTCTGATTTACAAAGTTTTTAAGAGTTTAAAGACTGTTATTTTTCATTTTGATATAAAAGCATCATCTCTCTGTTGTTACATTCATTCCCGTCTTGTTAAATTTTTGTTTAACTATTTCAATTAATACTTCTCATCATTTTTGTTTAATTTTACTTTCCTATGTTTATCTTTATTTTTTTTTTAATAAAAGAATCAAGACTCTTATTTTGTCTCAAACATGTTGGTTTTCATGAAATATTATTTGCTTCTTAGAAAAGTTGTCCTATACGTTGGTTGTCCCTTAATATTTGTGGGCTCAAATAAAGATCATTGGTTGCCTCGAAATATGTTGGCTGCTGCTATTTCTTTTTTTGCTCCAGTATGTCAGTTTTTCCTAAAAATTGGTTCGGTCGAAATATATGGCCAATAGTTTCATCGATATGTTCGTTGTCCCTTAAAATTGGTTGACTTGAAATATAAAATCAATGCTCGGGGTTCCCTAAAAGTTGGTTGCCTTTAAATATAGGACCAATAGTTGGTTCAATGTGTCGGTTGTCCCTAAAAATATGTTGCCTCGATATGTTGGTTGTCCCTAAAATTTGTTGCCTCGATATGTCGGTTGTCCCTATAAATTGGTTGCCTCGATATGTCGGTTGTCCCTATAAATTGGTTGCCTCGATATGTCGGTTGTCCCTATAAATTGGTTGCCTCGATATGTCGGTTGTCCCTATAAATTGGTTGCCTCGATATGTCGGTTGTCCCTATAAATTGGTTGCCTCAAAATATACAATTAATGGTTGCTTAGTCACCAAATACCCCTTGATCATATTTACACCCATGCACCTCCATCGAGCCGGGGAGAAGAGTTGGCTGTCATGTCGTACTCGAGGTAGGATTGCATTGACGATGCTTGCACCTAGTTGTTTCGTTTGTTGGCTTTAAATTATAAGAAACAACCAAGGTTGGCATAGTCATAGCGTGCTTGCCTCAAGCAAGACGAGATCGCTCGCGATCACTCCCCCAAAGAGCTTGTCAATCATAAAGATTGGAGATTTCAAAAACTTGTTGGTTGGTTGTTAGACCGCGCACGACGTTGCGAGCTTGGCTTCGCCCGATGATTTTGCACCTTGACTTGTTGCATGGGTGCAAATAGTCGAGCGTCGATCAAGTTTGTTGGACGTACGTCGCATGAGTGGTGATTTGGGTTGAACTTTTGGTGCCTACACCTCCTTCTCAATTGGACTTACTCAAAGTAATTTGAGTGGTGGCGATTGATTAGATCGTTGCATTGATTAAGGACCAAGGTTGTATAGTCATAGCGTGCTTGCCTCGAGCAAGACGAGATCGCCCGCGATCACTCCCCCAAAGAGCTTGTCAATCATAAAGAAAGGAGATTTCAAAAACTTGTTGGTTGGTTGTTAGACCACGCACGACGTTTCGAGCTTGACTTCGTCCGATGATTTTTCACCCTAACTTGTTGCATGGGTGCAAATAGTCGGGCGTCGATCAAGTTTGTTGGACGTACGGCGCATGAGTGGTGATTCGGTTGTGTGGGTTGAACTTTTGGTGCCTACACCTCCTTATCAATTGGACTTTACTCAAAGTAATTTGAGTGGTGGCGATTGATTAGTTCGTTGCATTGTTAAGGACCAAGATTGCATAGTCATAGCGTGCTTGCCTCAAGCAAGACGAGATCGCCCGCAATCACTCCCCCAAAGAGCCTGTCAATCATAAGGAATGAAGATTTCAAAAACTTGTTGGTTGATAGTTAGATCGCGCACGACGTTGTGAGCTTGGCTTCGCCCGATGATTTTGCACCGTGACTTGTTGCATGGGTGCAAATAGTCGAGCGTCGATCAAGTTTGTTGGACGTACGACGCATGAGTGGTGATTTGGCTGTGTGGGTTGAACTTTTGGTGCCTACACCTCCTCATCAATTGGACTTTACTCAAAGTAATTTGAGTGGTGGCGATTGATTAGTTCGTTGCATTGTCAAGGACCAAGGTTGCAGAGTGATAGCGTGCTTGCCTCAAGCAAGACGATATCGCCCGTAATCACTCCCCCAAAGAGCGTGTCAATCATAAGGAATGGAGATTTCAAAAACTTGTTGGTTGGTTGGTAGACCGCGCACGACGTTGCGAGCTTGGCTTCGCCTGATGATTTTGCATCCTGACTTGTTGCATGGGTGCAAATAATCGAGCATCAATCAAGTTTGTTGGACGTACGGCGCATGAGTGGTGATTCGACTGTGTGGGTTGAACTTTTGGTGCATACACCTCTTCCTCAATTGGACTTTACTCAAAGTAATTTGAGTGGTTGTGATCGATTAGTTCGTTGCATTGATTAAGGACCAAGGTTGCGTAGTCATAGCGTGCTTGCCTCGAGCAAGACGAGATCGCCCGCGATCACTCCCCCAAACAGCTTGTCAATTATAAAGAAAGGAGATTTCAAAAACTTGTTGGTTGGTTGTTAGACCGCGCACGACGTTTCGAGCTTGGCTTCGCTTGATGATTTTTCACCCTGACTTGTTGCATGGGTGCAAATAGTCGAGCGTCGATCAAGTTTGTTGGACGTACGACGCATGAGTGGTGATTTGACTGTGTGGGTTGAACTTTTGGTGCCTACACCTCCTCATCAATTGGAATTTACTCAAAGTAATTTGAGTGGTCGCGATTGATTAGTTCGTTGCATTGTTAAAGACCAAGATTGCATAGTCATAGCGTGTTGCCTCAAGCAAGACGAGATCGCTCGCGATCACTCCCCCAAAGAGCTTGTCAATCATAAAGAATGGAGATTTCAAAAACTTGTTGGTTGATTGTTAGACCGCGCACCCCCTGACTTGTTGCATGGGTGCAAATAGTCGAGCGTCGATCAAGTTTGTTGGACGTACGGCGCATGAGTGGTGATTCGACTGTGTGGGTTGAACTTTTGGTGCCTACACCTCCTCATCAATTGGACTTTACTCAAAGTAATTTGAGTGGTGGCGATTGATTAGTTCGTTGCATTGATTAAGGACCAAGGTTGCATAGTCATAGCGTGCTTGCGTCAAGCAAGACGAGATTGCCTTCGATCACTCCCCCAAAGAGCTTGTCCATCGTAAAGAAAGAAGATTTCAGAAAGGTGTCGGTGGTTGTTAGACCGCGCACGACGATGCTCTCTTGGGTATGTCGGTTGTCCCTAAGTATTGGTTGACTCAAAATATAAGACCAATGGTTGCCGTTATGTCGGTTTGTCCTTAAAAATTGGTTATCTTGAAATGTAGGACCAATGTTTGCCTCGAAATATAGGTTGTCCCTAAAAATTTATTGCATCAGTATGTTGGTTGTGTCCCTAAAGATTGTTTGTCTTTATATGGTACGTTGATTGTCCCTAAAAATTGGTTGTCTCGATAGGTAGGTTATCCTAAAAATTGGTTTCCTCAAAATGTAGAACCAATGATTGCCTCAATATCTCGGTTGTCCCTTAAAATAATTGGTTGCCCTGATGTCACCTTGAAATATATGACTAATGGTTGCTTAGCCACTCAACACCTCCCATGGGATAGTTAGGTCGAATGTACACCCATGCCCTTGTATTGAGCGAGGGGAGATAGTGGGTTGTCGAGTCGAACTCAGAGCGGGCGAGCTTTGACTATGCTTGCACATGGTTGTTTTGTTTGTTGGCTTTCGATGATAATAAACGACCTAGCTTTCTAAGTCACAACATGCTTGGCTCAAATGAGACAAGATCTCTTGTGCTCGATGAAAGGGCTCACCCATCAATAAGAAAGAGATGGTTTTGGAAAGATGTTTGTTGGTTGTTGGATCACACACAACATTGCGAGCTCGACTTTGCCTGGCGACATCCTTTCCTTGCTTGTAGGGGGGCGCGAATAGTTGAGCATTGATTGGGTTCGTTGTGGCGTACGGTGCATGAGTGGTGATTCGATTGATTGGACGTGCGTCAAAGCAATATGAGTGGCAACAATGGATAAGTTCTTGCATCGGTTACCTAGCGTGAATGATGTGTTGCATCTCAGGATGTGTTGCATCTCATCAATCCTTTTCTAGCGAAAGGGTGTGCGACAATCTTAGAATAGAAGCCCAAGTTGCATGAAATACGACGGGGTTCGTCGTTGATTGCAGCATCGGTTGGTTGCTATCTTGGGTGTGGTGCATTAGGTGGCATGATGTACGTTCAAGGTCCCTCTTTATTATTAATTGTTTCTATATATATTTCATCTTATTAATGAAATATTCGTTTCTCATAGAAAAAAGGTCAAGCCTCAAACATGTTGCCCTCTGAAAATGGTACACCAGTAAGTAAGCCCATTATGGAAAATCCTCATCTGAAACGTTGGGAAGAGTGGCATGGGAGTCCCAGATCTCCCCAGCAAATGAGTTGGTGTGTACTAATGGAAAAAGGGTATTGTGGAGGAAGAAGTCGGTAAAGTCCAAAAGGCCAAGAAGGTTAAGCCAACTCCGTATTGATGCTATTTCTGTGACAGAACATACAATGGCGACCCCTGACTCAAGAGCATTGAACATTATAAAAATCCTCGGTTAGAATGCTCGTGGATTGGGAAGTCAACGAGCATTCCTCCAAATCTTGCACAATTTTGGTGCAAGAGAGGCATAAACGAAGATGGAAGAAGCACGCTGCAAACAGTTGAGCTGAGACTTGACTATTGGATTGCATTAGGCAGTAAGAGTGCTAGCAGGGGATTGGGTTTGTTTCGGGAGGGAGACATGATTTTGTTGATCCAATCCTATAACATGTATCACGTTGATATGCTTGTTTCAGGAAAGGATTGCAAATGTAGATAAACGGGCTCGGACCACTGTCCCATTGAAATCGCAATTCGGAAAAATGTATTATGAAGAAGGGATCCAAAATTAAGAATTTTCAGACTCGAGGAAGCGTGGCTTCAACAAGAGGAGTTTGAGAAAGTAATCCACAGATACCACCCAAAGAAATATGACCAATATGGATGATCATCTTGTCCATCGAGTGGCCTACTGTACTAGAAGGCTGCAAACATGGGGGAAAGATAAAATGGGCAAGTATAAGGAGAAAATTTCATTAGCCAAGAACTTTCAGAGTGCTATTGACAGCAATAATGGAATTTTGGAAGCGGTTAAATGAGTGGAAAATCTCTTACAGGAGGAGGAAAGTTTTTGGAAGAAACCAGCAAGACTTAACTGGCTCATATGGGGTGATAAAAATACATTGTGGTTCCATTGAAAAGCTACGCGAAGACGGAAAAAGAATAGAAATGAGGGCCTTTTTAATGCCGGGGGATTGTATTACAACTGACCAAGGCATGGCCAGCATAGTATTGGATTCTTCCTCAAATCTGTTCTCATCTAAAAATTTGGAGAATAGTGTAGACATGAACCATTTTCTAGGAGAAGTTAAGTCAAGAATAAGCATAGAGATGAATGAGATGGTAAATGCGGAGTTCACAGAAGAGGAAATTCACAAGGCACTTGGCTAA

mRNA sequence

ATGGCTCAGTCACACTACCATAGCGGGAACCCAAACATTCCACGACCTTCTCTTCTTGCATCCACGGAGCAATCCAGTGCCATTCATTGTCCAGATTTCCTATGGTCTAATGGCGCATTGTTGCGGTACAGGTTAAATTTTGATTTGAATCATCGCCGTAAATTTCCAGAGACATCGGAGCCTGCGGATTACCTGTTCAGGGCATTGGGGCAGTCTGCCCAGAGAAAACAATCCTTATTGCTGGTAACAGTTGGTTCCATCAATAGCGTTGTTGTCTCTGTTATTGAAAGTTTCTACAACCACATTTCAGGAAACATTCTACTAGATGAGGGTGACATAAAAACATTGGAGTTGAGATCATTAAGGTTGGGGCATATGGCAATCAGGAGGAGGAAAGTTTTTGGAAGAAACCAGCAAGACTTAACTGGCTCATATGGGGTGATAAAAATACATTGTGGTTCCATTGAAAAGCTACGCGAAGACGGAAAAAGAATAGAAATGAGGGCCTTTTTAATGCCGGGGGATTGTATTACAACTGACCAAGGCATGGCCAGCATAGTATTGGATTCTTCCTCAAATCTGTTCTCATCTAAAAATTTGGAGAATAGTGTAGACATGAACCATTTTCTAGGAGAAGTTAAGTCAAGAATAAGCATAGAGATGAATGAGATGGTAAATGCGGAGTTCACAGAAGAGGAAATTCACAAGGCACTTGGCTAA

Coding sequence (CDS)

ATGGCTCAGTCACACTACCATAGCGGGAACCCAAACATTCCACGACCTTCTCTTCTTGCATCCACGGAGCAATCCAGTGCCATTCATTGTCCAGATTTCCTATGGTCTAATGGCGCATTGTTGCGGTACAGGTTAAATTTTGATTTGAATCATCGCCGTAAATTTCCAGAGACATCGGAGCCTGCGGATTACCTGTTCAGGGCATTGGGGCAGTCTGCCCAGAGAAAACAATCCTTATTGCTGGTAACAGTTGGTTCCATCAATAGCGTTGTTGTCTCTGTTATTGAAAGTTTCTACAACCACATTTCAGGAAACATTCTACTAGATGAGGGTGACATAAAAACATTGGAGTTGAGATCATTAAGGTTGGGGCATATGGCAATCAGGAGGAGGAAAGTTTTTGGAAGAAACCAGCAAGACTTAACTGGCTCATATGGGGTGATAAAAATACATTGTGGTTCCATTGAAAAGCTACGCGAAGACGGAAAAAGAATAGAAATGAGGGCCTTTTTAATGCCGGGGGATTGTATTACAACTGACCAAGGCATGGCCAGCATAGTATTGGATTCTTCCTCAAATCTGTTCTCATCTAAAAATTTGGAGAATAGTGTAGACATGAACCATTTTCTAGGAGAAGTTAAGTCAAGAATAAGCATAGAGATGAATGAGATGGTAAATGCGGAGTTCACAGAAGAGGAAATTCACAAGGCACTTGGCTAA

Protein sequence

MAQSHYHSGNPNIPRPSLLASTEQSSAIHCPDFLWSNGALLRYRLNFDLNHRRKFPETSEPADYLFRALGQSAQRKQSLLLVTVGSINSVVVSVIESFYNHISGNILLDEGDIKTLELRSLRLGHMAIRRRKVFGRNQQDLTGSYGVIKIHCGSIEKLREDGKRIEMRAFLMPGDCITTDQGMASIVLDSSSNLFSSKNLENSVDMNHFLGEVKSRISIEMNEMVNAEFTEEEIHKALG
Homology
[Close]
BLAST of Moc06g08510 vs. ExPASy Swiss-Prot
Match: F2PRR1 (ABC multidrug transporter MDR2 OS=Trichophyton equinum (strain ATCC MYA-4606 / CBS 127.97) OX=559882 GN=MDR2 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 76  KQSLLLVTVGSINSVVVSVIESFYNHISGNILLDEGDIKTLELRSLR 123
           K + L+   GS  S VV ++E FYN +SG++LLD  DIKTL LR LR
Sbjct: 451 KTTALVGPSGSGKSTVVGLLERFYNPVSGSVLLDGRDIKTLNLRWLR 497

[Close]
BLAST of Moc06g08510 vs. ExPASy Swiss-Prot
Match: A0A059JJ46 (ABC multidrug transporter MDR2 OS=Trichophyton interdigitale (strain MR816) OX=1215338 GN=MDR2 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 76  KQSLLLVTVGSINSVVVSVIESFYNHISGNILLDEGDIKTLELRSLR 123
           K + L+   GS  S VV ++E FYN +SG++LLD  DIKTL LR LR
Sbjct: 451 KTTALVGPSGSGKSTVVGLLERFYNPVSGSVLLDGRDIKTLNLRWLR 497

[Close]
BLAST of Moc06g08510 vs. ExPASy Swiss-Prot
Match: F2RP52 (ABC multidrug transporter MDR2 OS=Trichophyton tonsurans (strain CBS 112818) OX=647933 GN=MDR2 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 76  KQSLLLVTVGSINSVVVSVIESFYNHISGNILLDEGDIKTLELRSLR 123
           K + L+   GS  S VV ++E FYN +SG++LLD  DIKTL LR LR
Sbjct: 451 KTTALVGPSGSGKSTVVGLLERFYNPVSGSVLLDGRDIKTLNLRWLR 497

[Close]
BLAST of Moc06g08510 vs. TAIR 10
Match: AT2G36910.1 (ATP binding cassette subfamily B1 )

HSP 1 Score: 42.7 bits (99), Expect = 4.7e-04
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 76  KQSLLLVTVGSINSVVVSVIESFYNHISGNILLDEGDIKTLELRSLR 123
           K   L+ + GS  S VVS+IE FY+  SG +LLD  D+KTL+LR LR
Sbjct: 397 KTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLR 443

[Close]
BLAST of Moc06g08510 vs. TAIR 10
Match: AT1G27940.1 (P-glycoprotein 13 )

HSP 1 Score: 42.4 bits (98), Expect = 6.1e-04
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0 

Query: 55   FPETSEPADYLFRALGQSAQRKQSLLLV-TVGSINSVVVSVIESFYNHISGNILLDEGDI 114
            F   + P   +F+ L       +SL +V   GS  S V+ +I  FY+  +GN+ +D  DI
Sbjct: 1011 FVYPTRPEIDIFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGQDI 1070

Query: 115  KTLELRSLR 123
            KTL LRSLR
Sbjct: 1071 KTLNLRSLR 1079

The following BLAST results are available for this feature:
BLAST of Moc06g08510 vs.
Match NameE-valueIdentityDescription
BLAST of Moc06g08510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F2PRR17.8e-0453.19ABC multidrug transporter MDR2 OS=Trichophyton equinum (strain ATCC MYA-4606 / C... [more]
A0A059JJ467.8e-0453.19ABC multidrug transporter MDR2 OS=Trichophyton interdigitale (strain MR816) OX=1... [more]
F2RP527.8e-0453.19ABC multidrug transporter MDR2 OS=Trichophyton tonsurans (strain CBS 112818) OX=... [more]
BLAST of Moc06g08510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Moc06g08510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36910.14.7e-0453.19ATP binding cassette subfamily B1 [more]
AT1G27940.16.1e-0439.13P-glycoprotein 13 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g08510.1Moc06g08510.1mRNA