Moc06g07940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g07940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein SPEAR3-like
Location	chr6: 5756826 .. 5758860 (+)
RNA-Seq Expression	Moc06g07940
Synteny	Moc06g07940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGGAGTGGTTATTTTGGGGAGCAGAGTTTGGGATCGCCGTCACCGTCGCCGTCTCCGAGGCGATCGGGGAAGAAGAGTGGTTCGGGTTCGAGTTCGGGTTCCGATAAGCAGCCGAGGCAGCCGCAGAGAGGATTGGGAGTGGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTTCAGCTGCTGCTGCTACGGCTAGTTATCATCCCACTTCTTACTCCTTCAACAACGTACCTACTCTTTCTCTTGTTTTGATTTGAACTTTCGACTTATAAGAAAGATTAATAGTAAGATTCCTTCAGCTCGACCTAATGGATAAGTTGACTTTTATATCGTTTCAGGATCAAGAGGCTGTGGCGAGAGTGCAGACGGGATATTCGTCTATGTCCTCGTCCTCGTCTTCCTCCTCGCCCTCCTATGCCTTCCCCTCCAATATTATGGTAACGACTCGCACAGCTCCGCTATTAATTAGTTTCTGTAGTATCTTCTAAATTAACACGATTTCAAATTACACTAATGTTTTATCTAGTTATATTCGAGACAATAATAAACGGATATTTTTATGTACTAATTTCTCGGTAGGACTAACCCTAGTGAGAAGTCGGTAGAATTTGAATTTTCGCAACAGTTTTTTTTTTAATAGGTAATTCTGTAAAATTATTTGATCTTTCTAAAAAAGAGATTTTTACCCACACAGTTACTTGAAAAGGTGTGTGTTATTTCTGATGCTAATAAGTAGCTTTACTTGATTAATTTGTATTAATAATTTTGTTAGCTTTTTCCTACAAATATCCAAAATTTCCAATAATGTTAAAAACAATAATTTATTATACTTGCAGATGGGGTTTGGAGAATATGAAAGAAGAAACCTCATAGATGGCGATTCTCAATACAGCACAGCAGCAAGGTAGTATTACAGATAATCATTTAATTAACTTAATCACACTTTTTGGTTAATATATGTTCTTTTAATTTACAGACAAATTAAGTTGAAAATAAATTTGAATGTAAAAATTAGATATTGATTGGTTAATTGGGAACAGATGGGATCCAAGCAACGGTGGCATCTTAGAGAGTACACAACATTTTGCACAGCCAAGTATGCCATGTTATCTTCAAAATCCACAAGCTGAGGTACTTACTCTAATTCTCTCTGGTTTTTATTTTGCTTCTTAATTTTTTTTTTTTAAATTTTGATTTGAGTCTTTGAATTAATTATGTTTTTCTCCAAATGTTAATTTTGGTCCAACTACTATTATAAAGGTCAAATTTTAGTCTCAATAATCTAAATATAACTCGAGCATGAGATGATGAATGAAATGACATCTAGATTTAACTTAGGATAAGATTTGCGGGTAGGGATGACTAAATGTGCAACTTAATGAAAGTTGGAGATCTGTTCGATAATGTTTTAGTTTCTTCATTTCTAATAAATGAAAATAGAATTTCATTACTCCCAACACCCATAAATTTTTCAAAAATGATAAAACTAGAATTATATTTATAGTGGAACAATGTTGTTTCTCAAACTTCTAAATTTAGGAAAAAAAACCTAAATAGTCATCAATTATTTAGATTTCTTACTAAAAACAAAAAATAACATTGTGGGCACTAAATGGCTAAAATTTTAAAGGTGGGAAAGACCAAAATAGAAAGTGAAAGTTTAGATACCGAAATAAAAAAGAGATTAAAAAAAGGGGTACCTTTCATTTTTCTAACTTTCTTGTAAATTTAGTGTTTCTGTAACTTTTCTATGGTGCATTTTTCCCAATGTAAAGTAGTTTCCAAAAAAGCATATACATGAGGGAAATCTCTTAAACAACACTTAAGTTTTGAGAATAATTTGGAAGATGAAGATGAAGATTTGTTTTTGTGAAAAGGGGTTAATTTTATGGGTGTGTGTTGGTGGTGCAGTGGAGGCAGAGCAGAAAGACAAAGAGCAAAAGGCAGAATAACATTAATTGTGAAGAAGCATGTGATGATGAGAGCCAAGAACTGGACTTGGAGCTCAGACTTTCAATCTAA

mRNA sequence

ATGGCCGGGAGTGGTTATTTTGGGGAGCAGAGTTTGGGATCGCCGTCACCGTCGCCGTCTCCGAGGCGATCGGGGAAGAAGAGTGGTTCGGGTTCGAGTTCGGGTTCCGATAAGCAGCCGAGGCAGCCGCAGAGAGGATTGGGAGTGGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTTCAGCTGCTGCTGCTACGGCTAGTTATCATCCCACTTCTTACTCCTTCAACAACGATCAAGAGGCTGTGGCGAGAGTGCAGACGGGATATTCGTCTATGTCCTCGTCCTCGTCTTCCTCCTCGCCCTCCTATGCCTTCCCCTCCAATATTATGATGGGGTTTGGAGAATATGAAAGAAGAAACCTCATAGATGGCGATTCTCAATACAGCACAGCAGCAAGATGGGATCCAAGCAACGGTGGCATCTTAGAGAGTACACAACATTTTGCACAGCCAAGTATGCCATGTTATCTTCAAAATCCACAAGCTGAGTGGAGGCAGAGCAGAAAGACAAAGAGCAAAAGGCAGAATAACATTAATTGTGAAGAAGCATGTGATGATGAGAGCCAAGAACTGGACTTGGAGCTCAGACTTTCAATCTAA

Coding sequence (CDS)

ATGGCCGGGAGTGGTTATTTTGGGGAGCAGAGTTTGGGATCGCCGTCACCGTCGCCGTCTCCGAGGCGATCGGGGAAGAAGAGTGGTTCGGGTTCGAGTTCGGGTTCCGATAAGCAGCCGAGGCAGCCGCAGAGAGGATTGGGAGTGGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTTCAGCTGCTGCTGCTACGGCTAGTTATCATCCCACTTCTTACTCCTTCAACAACGATCAAGAGGCTGTGGCGAGAGTGCAGACGGGATATTCGTCTATGTCCTCGTCCTCGTCTTCCTCCTCGCCCTCCTATGCCTTCCCCTCCAATATTATGATGGGGTTTGGAGAATATGAAAGAAGAAACCTCATAGATGGCGATTCTCAATACAGCACAGCAGCAAGATGGGATCCAAGCAACGGTGGCATCTTAGAGAGTACACAACATTTTGCACAGCCAAGTATGCCATGTTATCTTCAAAATCCACAAGCTGAGTGGAGGCAGAGCAGAAAGACAAAGAGCAAAAGGCAGAATAACATTAATTGTGAAGAAGCATGTGATGATGAGAGCCAAGAACTGGACTTGGAGCTCAGACTTTCAATCTAA

Protein sequence

MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNNINCEEACDDESQELDLELRLSI

Homology

[Close]

BLAST of Moc06g07940 vs. NCBI nr
Match: XP_022145014.1 (protein SPEAR3-like [Momordica charantia])

HSP 1 Score: 387.1 bits (993), Expect = 9.2e-104
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGE 60
           MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGE 60

Query: 61  IASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYE 120
           IASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYE
Sbjct: 61  IASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYE 120

Query: 121 RRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNN 180
           RRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNN
Sbjct: 121 RRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNN 180

Query: 181 INCEEACDDESQELDLELRLSI 203
           INCEEACDDESQELDLELRLSI
Sbjct: 181 INCEEACDDESQELDLELRLSI 202

[Close]

BLAST of Moc06g07940 vs. NCBI nr
Match: XP_022933519.1 (protein SPEAR1-like [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-60
Identity = 143/211 (67.77%), Postives = 161/211 (76.30%), Query Frame = 0


Query: 3   GSGYFGEQSLG-----------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQ 62
           GSGYFGE   G           S SPS S  R G+K       GSDKQPRQPQRGLGVAQ
Sbjct: 2   GSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRK------GGSDKQPRQPQRGLGVAQ 61

Query: 63  LEKIRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSN 122
           LEKIRLHGEI       A++HPTSY+FNNDQE V+RVQTGYSS+  SS+SSSPSY FPSN
Sbjct: 62  LEKIRLHGEI-------AAFHPTSYTFNNDQE-VSRVQTGYSSV-PSSTSSSPSYGFPSN 121

Query: 123 IMMGFGEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSR 182
           +MMGFGEYERRNL DGDSQYSTAARWDPSNGGILE+ QHFAQP+MPCYLQNPQAEW Q+R
Sbjct: 122 VMMGFGEYERRNLRDGDSQYSTAARWDPSNGGILEA-QHFAQPNMPCYLQNPQAEWTQTR 181

Query: 183 KTKSKRQNNINCEEACDDESQELDLELRLSI 203
           ++K + ++    + +   ESQELDLELRLSI
Sbjct: 182 RSKRQERSGRMSQNSEACESQELDLELRLSI 196

[Close]

BLAST of Moc06g07940 vs. NCBI nr
Match: XP_023007409.1 (protein SPEAR1-like [Cucurbita maxima])

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-60
Identity = 142/208 (68.27%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 3   GSGYFGEQSLG--------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEK 62
           GSGYFGE   G        S S S SP R G+K       GSDKQPRQPQRGLGVAQLEK
Sbjct: 2   GSGYFGEPGFGNERGSGLLSSSSSSSPSRRGRK------GGSDKQPRQPQRGLGVAQLEK 61

Query: 63  IRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMM 122
           IRLHGEI       A++HPTSY+FNNDQE V+RVQTGYSS+  SS+SSSPSY FPSN+MM
Sbjct: 62  IRLHGEI-------AAFHPTSYTFNNDQE-VSRVQTGYSSV-PSSTSSSPSYGFPSNVMM 121

Query: 123 GFGEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTK 182
           GFGEYERRNL DGDSQYSTAARWDPSNGGILE+ QHFAQP+MPCYLQNPQ EW Q+R++K
Sbjct: 122 GFGEYERRNLRDGDSQYSTAARWDPSNGGILEA-QHFAQPNMPCYLQNPQEEWTQTRRSK 181

Query: 183 SKRQNNINCEEACDDESQELDLELRLSI 203
            + ++    + +   ESQELDLELRLSI
Sbjct: 182 RQERSGRMSQNSEACESQELDLELRLSI 193

[Close]

BLAST of Moc06g07940 vs. NCBI nr
Match: XP_023531219.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 8.2e-60
Identity = 140/206 (67.96%), Postives = 159/206 (77.18%), Query Frame = 0


Query: 3   GSGYFGEQSLGSP------SPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIR 62
           GSGYFGE   G+       S S S   S   +  G   GSDKQPRQPQRGLGVAQLEKIR
Sbjct: 2   GSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKIR 61

Query: 63  LHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGF 122
           LHGEI       A++HPTSY+FNNDQE V+RVQTGYSS+  SS+SSSPSY FPSN+MMGF
Sbjct: 62  LHGEI-------AAFHPTSYTFNNDQE-VSRVQTGYSSV-PSSTSSSPSYGFPSNVMMGF 121

Query: 123 GEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSK 182
           GEYERRNL DGDSQYSTAARWDPSNGGILE+ QHFAQP+MPCYLQNPQAEW Q+R++K +
Sbjct: 122 GEYERRNLRDGDSQYSTAARWDPSNGGILEA-QHFAQPNMPCYLQNPQAEWTQTRRSKRQ 181

Query: 183 RQNNINCEEACDDESQELDLELRLSI 203
            ++    + +   ESQELDLELRLSI
Sbjct: 182 ERSGRMSQNSEACESQELDLELRLSI 197

[Close]

BLAST of Moc06g07940 vs. NCBI nr
Match: KAG6587980.1 (Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021872.1 Protein SPEAR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-59
Identity = 142/211 (67.30%), Postives = 160/211 (75.83%), Query Frame = 0


Query: 3   GSGYFGEQSLG-----------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQ 62
           GSGYFGE   G           S SPS S  R G+K       GSDKQPRQPQRGLGVAQ
Sbjct: 2   GSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRK------GGSDKQPRQPQRGLGVAQ 61

Query: 63  LEKIRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSN 122
           LEKIRLHGEI       A++HPTSY+FNNDQE V+RVQTGYSS+  SS+SSSPSY FPSN
Sbjct: 62  LEKIRLHGEI-------AAFHPTSYTFNNDQE-VSRVQTGYSSV-PSSTSSSPSYGFPSN 121

Query: 123 IMMGFGEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSR 182
           +MMGFGEYERRNL DGDSQYSTAARWDPSNGGILE+ QHFAQP+MP YLQNPQAEW Q+R
Sbjct: 122 VMMGFGEYERRNLRDGDSQYSTAARWDPSNGGILEA-QHFAQPNMPSYLQNPQAEWTQTR 181

Query: 183 KTKSKRQNNINCEEACDDESQELDLELRLSI 203
           ++K + ++    + +   ESQELDLELRLSI
Sbjct: 182 RSKRQERSGRMSQNSEACESQELDLELRLSI 196

[Close]

BLAST of Moc06g07940 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 93/214 (43.46%), Postives = 116/214 (54.21%), Query Frame = 0


Query: 3   GSGYFGEQSL-GSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGEI 62
           GS +FG   + GS S SP+   S       + +GSDK P+QPQRGLGVAQLEKIRLHGE 
Sbjct: 2   GSSFFGRPKMGGSSSSSPTSSSSSPAKRGKNKNGSDK-PKQPQRGLGVAQLEKIRLHGEY 61

Query: 63  ASAAAAT-ASYHPTSYSFNNDQEAVARVQTGYSSMSSSS-----SSSSP---SYAFPSNI 122
              +  T  SYHP++Y     QE V R+Q GY S+ SSS     +SSSP    Y F  N+
Sbjct: 62  NCNSFNTYPSYHPSTY-----QEDV-RIQGGYPSIPSSSPSFSYASSSPPPAPYGFHPNM 121

Query: 123 MMGFG--EYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQS 182
           MM     +YER  +  GDSQ   A  W+PS  GILES QHF +P+              +
Sbjct: 122 MMNANNDQYERTTIRYGDSQPHRAPSWNPSY-GILES-QHFVEPN-------------TT 181

Query: 183 RKTKSKRQNNINCEEACDD----ESQELDLELRL 201
           R    + Q NI+      +    E+ ELDLELRL
Sbjct: 182 RHFLHEDQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Moc06g07940 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.8e-16
Identity = 82/203 (40.39%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 3   GSGYFGEQS-LGSPSPSPSPRRSGKKSGS--GSSSGSDKQPRQPQRGLGVAQLEKIRLHG 62
           GS +FG  + +GS  PS SP  S     +  G  +GS+K P+QPQRGLGVAQLEKIRLHG
Sbjct: 2   GSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKIRLHG 61

Query: 63  EIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEY 122
           E+  +  +  SY+P+ Y     QE V R+Q GYSS+ S SS+    Y F  N+MMG    
Sbjct: 62  EM--SCNSFNSYNPSLY----PQEDV-RMQGGYSSIPSQSSA---PYGFYPNMMMG---- 121

Query: 123 ERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQN 182
                +  D        W+PS  GILES QH  +P++  +  N       S  T+  +  
Sbjct: 122 -----VHRDQYDRATMSWNPSY-GILES-QHSLEPNITRHFLNED----PSSTTRRSKSL 178

Query: 183 NINCEEACDDESQELDLELRLSI 203
               + +   E+QE+DLELRLS+
Sbjct: 182 GSGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Moc06g07940 vs. ExPASy TrEMBL
Match: A0A6J1CTY8 (protein SPEAR3-like OS=Momordica charantia OX=3673 GN=LOC111014542 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.5e-104
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGE 60
           MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MAGSGYFGEQSLGSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGE 60

Query: 61  IASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYE 120
           IASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYE
Sbjct: 61  IASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEYE 120

Query: 121 RRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNN 180
           RRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNN
Sbjct: 121 RRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQNN 180

Query: 181 INCEEACDDESQELDLELRLSI 203
           INCEEACDDESQELDLELRLSI
Sbjct: 181 INCEEACDDESQELDLELRLSI 202

[Close]

BLAST of Moc06g07940 vs. ExPASy TrEMBL
Match: A0A6J1EZZ7 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111440921 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.1e-61
Identity = 143/211 (67.77%), Postives = 161/211 (76.30%), Query Frame = 0


Query: 3   GSGYFGEQSLG-----------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQ 62
           GSGYFGE   G           S SPS S  R G+K       GSDKQPRQPQRGLGVAQ
Sbjct: 2   GSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRK------GGSDKQPRQPQRGLGVAQ 61

Query: 63  LEKIRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSN 122
           LEKIRLHGEI       A++HPTSY+FNNDQE V+RVQTGYSS+  SS+SSSPSY FPSN
Sbjct: 62  LEKIRLHGEI-------AAFHPTSYTFNNDQE-VSRVQTGYSSV-PSSTSSSPSYGFPSN 121

Query: 123 IMMGFGEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSR 182
           +MMGFGEYERRNL DGDSQYSTAARWDPSNGGILE+ QHFAQP+MPCYLQNPQAEW Q+R
Sbjct: 122 VMMGFGEYERRNLRDGDSQYSTAARWDPSNGGILEA-QHFAQPNMPCYLQNPQAEWTQTR 181

Query: 183 KTKSKRQNNINCEEACDDESQELDLELRLSI 203
           ++K + ++    + +   ESQELDLELRLSI
Sbjct: 182 RSKRQERSGRMSQNSEACESQELDLELRLSI 196

[Close]

BLAST of Moc06g07940 vs. ExPASy TrEMBL
Match: A0A6J1L4V3 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111499911 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.0e-60
Identity = 142/208 (68.27%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 3   GSGYFGEQSLG--------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEK 62
           GSGYFGE   G        S S S SP R G+K       GSDKQPRQPQRGLGVAQLEK
Sbjct: 2   GSGYFGEPGFGNERGSGLLSSSSSSSPSRRGRK------GGSDKQPRQPQRGLGVAQLEK 61

Query: 63  IRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMM 122
           IRLHGEI       A++HPTSY+FNNDQE V+RVQTGYSS+  SS+SSSPSY FPSN+MM
Sbjct: 62  IRLHGEI-------AAFHPTSYTFNNDQE-VSRVQTGYSSV-PSSTSSSPSYGFPSNVMM 121

Query: 123 GFGEYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTK 182
           GFGEYERRNL DGDSQYSTAARWDPSNGGILE+ QHFAQP+MPCYLQNPQ EW Q+R++K
Sbjct: 122 GFGEYERRNLRDGDSQYSTAARWDPSNGGILEA-QHFAQPNMPCYLQNPQEEWTQTRRSK 181

Query: 183 SKRQNNINCEEACDDESQELDLELRLSI 203
            + ++    + +   ESQELDLELRLSI
Sbjct: 182 RQERSGRMSQNSEACESQELDLELRLSI 193

[Close]

BLAST of Moc06g07940 vs. ExPASy TrEMBL
Match: A0A5A7VAB9 (Protein SPEAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001280 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.5e-56
Identity = 143/211 (67.77%), Postives = 160/211 (75.83%), Query Frame = 0


Query: 3   GSGYFGEQSLG---------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLE 62
           GSGYFGE SLG         S S SPS  R GKK       GSDKQPRQPQRGLGVAQLE
Sbjct: 2   GSGYFGEPSLGNNNERGSGSSSSSSPSSSRRGKK------GGSDKQPRQPQRGLGVAQLE 61

Query: 63  KIRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIM 122
           KIRLHGEIAS     A +HPTSY+F NDQE +ARVQTGY+S+  SS+SSSPSY FPSN+M
Sbjct: 62  KIRLHGEIAS-----AGFHPTSYAFTNDQE-IARVQTGYASV-PSSTSSSPSYGFPSNVM 121

Query: 123 MGFGEYERRNLIDGDSQYSTAARWDPS-NGGILESTQHFAQPSMPCYLQNPQA-EWRQSR 182
           MGFGEYERR+L DGDSQYST  RWDPS NGGILES QHFAQP+M CYLQNPQA +W QSR
Sbjct: 122 MGFGEYERRSLRDGDSQYST--RWDPSNNGGILES-QHFAQPNMTCYLQNPQADQWTQSR 181

Query: 183 KTKSKRQNNINCEEACDDESQELDLELRLSI 203
           ++K + ++    + +   ESQELDLELRLSI
Sbjct: 182 RSKRQERSGNMGQNSEGCESQELDLELRLSI 196

[Close]

BLAST of Moc06g07940 vs. ExPASy TrEMBL
Match: A0A1S3CHQ6 (protein SPEAR1-like OS=Cucumis melo OX=3656 GN=LOC103501036 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.5e-56
Identity = 143/211 (67.77%), Postives = 160/211 (75.83%), Query Frame = 0


Query: 3   GSGYFGEQSLG---------SPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLE 62
           GSGYFGE SLG         S S SPS  R GKK       GSDKQPRQPQRGLGVAQLE
Sbjct: 2   GSGYFGEPSLGNNNERGSGSSSSSSPSSSRRGKK------GGSDKQPRQPQRGLGVAQLE 61

Query: 63  KIRLHGEIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIM 122
           KIRLHGEIAS     A +HPTSY+F NDQE +ARVQTGY+S+  SS+SSSPSY FPSN+M
Sbjct: 62  KIRLHGEIAS-----AGFHPTSYAFTNDQE-IARVQTGYASV-PSSTSSSPSYGFPSNVM 121

Query: 123 MGFGEYERRNLIDGDSQYSTAARWDPS-NGGILESTQHFAQPSMPCYLQNPQA-EWRQSR 182
           MGFGEYERR+L DGDSQYST  RWDPS NGGILES QHFAQP+M CYLQNPQA +W QSR
Sbjct: 122 MGFGEYERRSLRDGDSQYST--RWDPSNNGGILES-QHFAQPNMTCYLQNPQADQWTQSR 181

Query: 183 KTKSKRQNNINCEEACDDESQELDLELRLSI 203
           ++K + ++    + +   ESQELDLELRLSI
Sbjct: 182 RSKRQERSGNMGQNSEGCESQELDLELRLSI 196

[Close]

BLAST of Moc06g07940 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 8.8e-20
Identity = 93/214 (43.46%), Postives = 116/214 (54.21%), Query Frame = 0


Query: 3   GSGYFGEQSL-GSPSPSPSPRRSGKKSGSGSSSGSDKQPRQPQRGLGVAQLEKIRLHGEI 62
           GS +FG   + GS S SP+   S       + +GSDK P+QPQRGLGVAQLEKIRLHGE 
Sbjct: 2   GSSFFGRPKMGGSSSSSPTSSSSSPAKRGKNKNGSDK-PKQPQRGLGVAQLEKIRLHGEY 61

Query: 63  ASAAAAT-ASYHPTSYSFNNDQEAVARVQTGYSSMSSSS-----SSSSP---SYAFPSNI 122
              +  T  SYHP++Y     QE V R+Q GY S+ SSS     +SSSP    Y F  N+
Sbjct: 62  NCNSFNTYPSYHPSTY-----QEDV-RIQGGYPSIPSSSPSFSYASSSPPPAPYGFHPNM 121

Query: 123 MMGFG--EYERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQS 182
           MM     +YER  +  GDSQ   A  W+PS  GILES QHF +P+              +
Sbjct: 122 MMNANNDQYERTTIRYGDSQPHRAPSWNPSY-GILES-QHFVEPN-------------TT 181

Query: 183 RKTKSKRQNNINCEEACDD----ESQELDLELRL 201
           R    + Q NI+      +    E+ ELDLELRL
Sbjct: 182 RHFLHEDQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Moc06g07940 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 7.0e-17
Identity = 82/203 (40.39%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 3   GSGYFGEQS-LGSPSPSPSPRRSGKKSGS--GSSSGSDKQPRQPQRGLGVAQLEKIRLHG 62
           GS +FG  + +GS  PS SP  S     +  G  +GS+K P+QPQRGLGVAQLEKIRLHG
Sbjct: 2   GSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKIRLHG 61

Query: 63  EIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEY 122
           E+  +  +  SY+P+ Y     QE V R+Q GYSS+ S SS+    Y F  N+MMG    
Sbjct: 62  EM--SCNSFNSYNPSLY----PQEDV-RMQGGYSSIPSQSSA---PYGFYPNMMMG---- 121

Query: 123 ERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQN 182
                +  D        W+PS  GILES QH  +P++  +  N       S  T+  +  
Sbjct: 122 -----VHRDQYDRATMSWNPSY-GILES-QHSLEPNITRHFLNED----PSSTTRRSKSL 178

Query: 183 NINCEEACDDESQELDLELRLSI 203
               + +   E+QE+DLELRLS+
Sbjct: 182 GSGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Moc06g07940 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 69/203 (33.99%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 3   GSGYFGEQS-LGSPSPSPSPRRSGKKSGS--GSSSGSDKQPRQPQRGLGVAQLEKIRLHG 62
           GS +FG  + +GS  PS SP  S     +  G  +GS+K P+QPQRGLGVAQLEKIRLHG
Sbjct: 2   GSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKIRLHG 61

Query: 63  EIASAAAATASYHPTSYSFNNDQEAVARVQTGYSSMSSSSSSSSPSYAFPSNIMMGFGEY 122
           E+  +  +  SY+P+ Y     Q  V R Q   ++MS                       
Sbjct: 62  EM--SCNSFNSYNPSLY----PQMGVHRDQYDRATMS----------------------- 121

Query: 123 ERRNLIDGDSQYSTAARWDPSNGGILESTQHFAQPSMPCYLQNPQAEWRQSRKTKSKRQN 182
                            W+PS  GILES QH  +P++  +  N       S  T+  +  
Sbjct: 122 -----------------WNPSY-GILES-QHSLEPNITRHFLNED----PSSTTRRSKSL 151

Query: 183 NINCEEACDDESQELDLELRLSI 203
               + +   E+QE+DLELRLS+
Sbjct: 182 GSGIQHSGSSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Moc06g07940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145014.1	9.2e-104	100.00	protein SPEAR3-like [Momordica charantia]	[more]
XP_022933519.1	1.3e-60	67.77	protein SPEAR1-like [Cucurbita moschata]	[more]
XP_023007409.1	2.2e-60	68.27	protein SPEAR1-like [Cucurbita maxima]	[more]
XP_023531219.1	8.2e-60	67.96	protein SPEAR1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6587980.1	1.8e-59	67.30	Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021872.1 Pr...	[more]

BLAST of Moc06g07940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	1.2e-18	43.46	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	9.8e-16	40.39	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of Moc06g07940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTY8	4.5e-104	100.00	protein SPEAR3-like OS=Momordica charantia OX=3673 GN=LOC111014542 PE=4 SV=1	[more]
A0A6J1EZZ7	6.1e-61	67.77	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111440921 PE=4 SV=1	[more]
A0A6J1L4V3	1.0e-60	68.27	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111499911 PE=4 SV=1	[more]
A0A5A7VAB9	4.5e-56	67.77	Protein SPEAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G0...	[more]
A0A1S3CHQ6	4.5e-56	67.77	protein SPEAR1-like OS=Cucumis melo OX=3656 GN=LOC103501036 PE=4 SV=1	[more]

BLAST of Moc06g07940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28840.1	8.8e-20	43.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	7.0e-17	40.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	3.1e-09	33.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..41
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 3..202
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 3..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g07940.1	Moc06g07940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity