Moc06g05830 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g05830
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Endo/exonuclease/phosphatase domain-containing protein
Location	chr6: 4208511 .. 4210080 (-)
RNA-Seq Expression	Moc06g05830
Synteny	Moc06g05830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTTACTTTGACTGTAATGACCTTCAATCTCCATGACGATCAACCACCGGAGAGTTCAAATTCATGGGAGAAGAGGAGGGATTTGTGTATTAGTGTCATCACTAGCTATTCTCCCGCGATTCTCTGTACTCAGCGTGGTAGGTGACTTTTCCTCTACTGCTATGTTACTCTATGGTATTGCATATTCGATTCTGTGAATGCTCGCGGATCTTGATCTTTGGTGTCATTGTTGTCGCAATAATTGATCTGGGTTTTGTTTGATTCGAGTTTTGTTGGTGGGTTTTTGGTTCTTTAGGATTTCGTTTGAGTTTTGAAAGCCACGGCCTGGGTTATTTTGTTGGGAAGCTCTAATGTTGTTTGCTTCCATTGGGCAGTGTGGCTATTCCAGTGGACTGTTGATTGTCATTCTTTTTTGGCTAACTTCAGTGATTGAGTTCAATTCATTTGATTGAGAAAAAAACTGATGCCCTCTTTTACCATTTTCCTCTCTGATTCCTTCATTTCTTTTCCTTGATGGGTTTCCAGGTGTGAAATCTCAATTGGAATTTCTTCAGCAGGGATTGCCTGGTATGTGTTTCTATTCTACTGAGGTTATTTACAAACTTGTAGGCTTATCATTGTTCAAATGAGATCATAATGTTTTTACCATGTCTGATGGGAGATTGTAATATAAGCCTGTGATGCCAAAATCTTTTATTTTGTCCTTAACAGTGTCATGACAATATGGAGGAAATGATGCTTAGAAAAGTGATTTTACTGATATACATGATACAAAGAAGTTCCTCACTGATAAGCTACCTGATTGAAAATTTGGTGAAGCTCAAATTATTAAAATTATCAATGATTAATCTGCTAGTGTGAATGAATTACAGGCTTGATTGCTGACCAATTGTTGAGGTATTAGTAGTATTAATCTTCATATGATTTTCATTAAATGCACAATACTTACTATCAATTTTGGAGCATTGGGCTACATTTATGAAAACGAAACGTGATTAATGAATGCTTCAATCTTAGGCGGCAATTGCCGATGCCTAGGCGTGTTAATGGGAACTGGACTTTTCTTCCCCGTATAAAACTTTGAAAGACAGTAAATGGGTGAAGAAAACAATCGTAAAGCAACTGCTTAAAATCGTATCGATATTTTCATAGGTCTCTATCCTTATCTTTTGAATTAGATTTTCTTCTGCTTGTAACTTGAAGTATTAAGTATCTTTTAGGCTATGACCAATTTGGAATTTCAAGAAAAGGATCCCATGACGATTCAGATGAACATTGCACAATCTTTTATGACAAGGAGAAGGTATCAGATTACTTTCCTTTTTGATTTGGCATCAGTTTTAATTCAAGTCCGATAATCTGGTGTGGTTTTTTCTGCTTTATCATTTCTTCCCTCCATTAAAAAGGTAGAGCTGTTAGAAGGCGGCACATTTTGGTTATCAGAATCACCTTCCGTTCCAGGAAGTATGTCTTGGGGTTCGATTGTTCCACATATTGCAACTTGGGCGATATCCTTGATATTTCATTATGACTTCTCTTACATTGCATGCTGCGCATCATTTTGA

mRNA sequence

ATGAGTGTTACTTTGACTGTAATGACCTTCAATCTCCATGACGATCAACCACCGGAGAGTTCAAATTCATGGGAGAAGAGGAGGGATTTGTGTATTAGTGTCATCACTAGCTATTCTCCCGCGATTCTCTGTACTCAGCGTGGTGTGAAATCTCAATTGGAATTTCTTCAGCAGGGATTGCCTGGCTATGACCAATTTGGAATTTCAAGAAAAGGATCCCATGACGATTCAGATGAACATTGCACAATCTTTTATGACAAGGAGAAGGTAGAGCTGTTAGAAGGCGGCACATTTTGGTTATCAGAATCACCTTCCGTTCCAGGAAGTATGTCTTGGGGTTCGATTGTTCCACATATTGCAACTTGGGCGATATCCTTGATATTTCATTATGACTTCTCTTACATTGCATGCTGCGCATCATTTTGA

Coding sequence (CDS)

ATGAGTGTTACTTTGACTGTAATGACCTTCAATCTCCATGACGATCAACCACCGGAGAGTTCAAATTCATGGGAGAAGAGGAGGGATTTGTGTATTAGTGTCATCACTAGCTATTCTCCCGCGATTCTCTGTACTCAGCGTGGTGTGAAATCTCAATTGGAATTTCTTCAGCAGGGATTGCCTGGCTATGACCAATTTGGAATTTCAAGAAAAGGATCCCATGACGATTCAGATGAACATTGCACAATCTTTTATGACAAGGAGAAGGTAGAGCTGTTAGAAGGCGGCACATTTTGGTTATCAGAATCACCTTCCGTTCCAGGAAGTATGTCTTGGGGTTCGATTGTTCCACATATTGCAACTTGGGCGATATCCTTGATATTTCATTATGACTTCTCTTACATTGCATGCTGCGCATCATTTTGA

Protein sequence

MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIATWAISLIFHYDFSYIACCASF

Homology

[Close]

BLAST of Moc06g05830 vs. NCBI nr
Match: KAG7035681.1 (hypothetical protein SDJN02_02479 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 124/134 (92.54%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGL
Sbjct: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGY QFG+SRKGS D SDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA
Sbjct: 61  PGYGQFGVSRKGSRDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120

Query: 121 TWAISLIFHYDFSY 135
           TWAISL FHY  +Y
Sbjct: 121 TWAISLRFHYILTY 134

[Close]

BLAST of Moc06g05830 vs. NCBI nr
Match: XP_022134563.1 (uncharacterized protein LOC111006799 [Momordica charantia])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL
Sbjct: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA
Sbjct: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. NCBI nr
Match: XP_004146677.1 (uncharacterized protein LOC101208977 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGL
Sbjct: 1   MSVTLTVMSFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGYDQFGISRKGSHDDSDEHCTI+YDKEKVELLEGGTFWLSESPSVPGSMSWGSI PHIA
Sbjct: 61  PGYDQFGISRKGSHDDSDEHCTIYYDKEKVELLEGGTFWLSESPSVPGSMSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. NCBI nr
Match: XP_008443859.1 (PREDICTED: uncharacterized protein LOC103487355 [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 3.8e-64
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGL
Sbjct: 1   MSVTLTVMSFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGYDQFGISRKGSHDDSDEHCTIFY+KEKVELLEGGTFWLSESPSVPGSMSWGSI PHIA
Sbjct: 61  PGYDQFGISRKGSHDDSDEHCTIFYEKEKVELLEGGTFWLSESPSVPGSMSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. NCBI nr
Match: XP_022921743.1 (uncharacterized protein LOC111429898 isoform X2 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 8.5e-64
Identity = 117/123 (95.12%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISV+TSYSPAILCTQ+GVKSQLEFLQQGL
Sbjct: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVLTSYSPAILCTQQGVKSQLEFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGY++FGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGS+SWGSI PHIA
Sbjct: 61  PGYEKFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSVSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. ExPASy TrEMBL
Match: A0A6J1C2C1 (uncharacterized protein LOC111006799 OS=Momordica charantia OX=3673 GN=LOC111006799 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL
Sbjct: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA
Sbjct: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. ExPASy TrEMBL
Match: A0A0A0LWF4 (Endo/exonuclease/phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G256710 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGL
Sbjct: 1   MSVTLTVMSFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGYDQFGISRKGSHDDSDEHCTI+YDKEKVELLEGGTFWLSESPSVPGSMSWGSI PHIA
Sbjct: 61  PGYDQFGISRKGSHDDSDEHCTIYYDKEKVELLEGGTFWLSESPSVPGSMSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. ExPASy TrEMBL
Match: A0A1S3B900 (uncharacterized protein LOC103487355 OS=Cucumis melo OX=3656 GN=LOC103487355 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGL
Sbjct: 1   MSVTLTVMSFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQQGVKSQLDFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGYDQFGISRKGSHDDSDEHCTIFY+KEKVELLEGGTFWLSESPSVPGSMSWGSI PHIA
Sbjct: 61  PGYDQFGISRKGSHDDSDEHCTIFYEKEKVELLEGGTFWLSESPSVPGSMSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. ExPASy TrEMBL
Match: A0A6J1JDF5 (uncharacterized protein LOC111485786 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485786 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64
Identity = 117/123 (95.12%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISV+TSYSPAILCTQ+GVKSQLEFLQQGL
Sbjct: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVLTSYSPAILCTQQGVKSQLEFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGY++FGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGS+SWGSI PHIA
Sbjct: 61  PGYEKFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSVSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. ExPASy TrEMBL
Match: A0A6J1JMQ8 (uncharacterized protein LOC111485786 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485786 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64
Identity = 117/123 (95.12%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISV+TSYSPAILCTQ+GVKSQLEFLQQGL
Sbjct: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVLTSYSPAILCTQQGVKSQLEFLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           PGY++FGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGS+SWGSI PHIA
Sbjct: 61  PGYEKFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSVSWGSIAPHIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. TAIR 10
Match: AT4G30900.1 (DNAse I-like superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSV+L+VM+FNLHDD P ES NSW KR+DLC++VITSYSP +LCTQ+GVKSQL++LQQGL
Sbjct: 1   MSVSLSVMSFNLHDDLPEESPNSWLKRKDLCLTVITSYSPIVLCTQQGVKSQLDYLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           P YDQFGISR G  D +DEHCTIF++KEKVELLEGGTFWLSESPSVPGS +WGS VP IA
Sbjct: 61  PAYDQFGISRTGPGDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTAWGSAVPCIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

[Close]

BLAST of Moc06g05830 vs. TAIR 10
Match: AT4G30900.2 (DNAse I-like superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 1   MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGL 60
           MSV+L+VM+FNLHDD P ES NSW KR+DLC++VITSYSP +LCTQ+GVKSQL++LQQGL
Sbjct: 1   MSVSLSVMSFNLHDDLPEESPNSWLKRKDLCLTVITSYSPIVLCTQQGVKSQLDYLQQGL 60

Query: 61  PGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSIVPHIA 120
           P YDQFGISR G  D +DEHCTIF++KEKVELLEGGTFWLSESPSVPGS +WGS VP IA
Sbjct: 61  PAYDQFGISRTGPGDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTAWGSAVPCIA 120

Query: 121 TWA 124
           TWA
Sbjct: 121 TWA 123

The following BLAST results are available for this feature:

BLAST of Moc06g05830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035681.1	1.4e-66	92.54	hypothetical protein SDJN02_02479 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022134563.1	2.4e-66	100.00	uncharacterized protein LOC111006799 [Momordica charantia]	[more]
XP_004146677.1	2.9e-64	95.93	uncharacterized protein LOC101208977 [Cucumis sativus]	[more]
XP_008443859.1	3.8e-64	95.93	PREDICTED: uncharacterized protein LOC103487355 [Cucumis melo]	[more]
XP_022921743.1	8.5e-64	95.12	uncharacterized protein LOC111429898 isoform X2 [Cucurbita moschata]	[more]

BLAST of Moc06g05830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g05830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2C1	1.2e-66	100.00	uncharacterized protein LOC111006799 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0LWF4	1.4e-64	95.93	Endo/exonuclease/phosphatase domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A1S3B900	1.8e-64	95.93	uncharacterized protein LOC103487355 OS=Cucumis melo OX=3656 GN=LOC103487355 PE=...	[more]
A0A6J1JDF5	4.1e-64	95.12	uncharacterized protein LOC111485786 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JMQ8	4.1e-64	95.12	uncharacterized protein LOC111485786 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Moc06g05830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30900.1	1.3e-54	78.05	DNAse I-like superfamily protein	[more]
AT4G30900.2	1.3e-54	78.05	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 2..129 e-value: 3.7E-40 score: 139.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 4..124
None	No IPR available	PANTHER	PTHR12121:SF36	DNASE I-LIKE SUPERFAMILY PROTEIN	coord: 5..126
None	No IPR available	PANTHER	PTHR12121	CARBON CATABOLITE REPRESSOR PROTEIN 4	coord: 5..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g05830.1	Moc06g05830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0004519	endonuclease activity