Moc06g04520 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g04520
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr6: 3222995 .. 3223201 (-)
RNA-Seq ExpressionMoc06g04520
SyntenyMoc06g04520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCTGGCATGCGTGTGGGAGGAGAAAGAGAAAGAGCTCGGGAGGCAACAGGCTCCGGGAACTTGCCCTTTCTGTCAAGGCAAAGTGTACGCCATTGATGTGGAGAGGCGATGGAAGCTCTGTTTCCTCCCGCTCTGCCTCAAGATCAAGAGGAAGTATCTCTGTACTCTCTGCTCTCGCCGCCTCGAATTGTGCCACTGGTAG

mRNA sequence

ATGTGGCTGGCATGCGTGTGGGAGGAGAAAGAGAAAGAGCTCGGGAGGCAACAGGCTCCGGGAACTTGCCCTTTCTGTCAAGGCAAAGTGTACGCCATTGATGTGGAGAGGCGATGGAAGCTCTGTTTCCTCCCGCTCTGCCTCAAGATCAAGAGGAAGTATCTCTGTACTCTCTGCTCTCGCCGCCTCGAATTGTGCCACTGGTAG

Coding sequence (CDS)

ATGTGGCTGGCATGCGTGTGGGAGGAGAAAGAGAAAGAGCTCGGGAGGCAACAGGCTCCGGGAACTTGCCCTTTCTGTCAAGGCAAAGTGTACGCCATTGATGTGGAGAGGCGATGGAAGCTCTGTTTCCTCCCGCTCTGCCTCAAGATCAAGAGGAAGTATCTCTGTACTCTCTGCTCTCGCCGCCTCGAATTGTGCCACTGGTAG

Protein sequence

MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCSRRLELCHW
Homology
BLAST of Moc06g04520 vs. NCBI nr
Match: XP_022135123.1 (uncharacterized protein LOC111007177 [Momordica charantia])

HSP 1 Score: 157.1 bits (396), Expect = 5.2e-35
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. NCBI nr
Match: XP_038879931.1 (uncharacterized protein LOC120071640 [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKE+ELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKERELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. NCBI nr
Match: XP_004146338.1 (uncharacterized protein LOC101203895 [Cucumis sativus] >XP_008453548.1 PREDICTED: uncharacterized protein LOC103494230 [Cucumis melo] >KAA0058206.1 uncharacterized protein E6C27_scaffold274G005270 [Cucumis melo var. makuwa] >KGN65493.1 hypothetical protein Csa_019621 [Cucumis sativus] >TYK28570.1 uncharacterized protein E5676_scaffold629G002170 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 4.4e-34
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKE+ELGRQQAPGTCPFCQGKVYAIDVER+WKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKEQELGRQQAPGTCPFCQGKVYAIDVERQWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. NCBI nr
Match: XP_022921752.1 (uncharacterized protein LOC111429909 [Cucurbita moschata])

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVW+EKEKELGRQQAPGTCPFC+GKV+AIDVERRWKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWDEKEKELGRQQAPGTCPFCRGKVHAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. NCBI nr
Match: KAG6589683.1 (hypothetical protein SDJN03_15106, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVW+EKEKELGRQQAPGTCPFC+GKV+AIDVERRWKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWDEKEKELGRQQAPGTCPFCRGKVHAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. ExPASy TrEMBL
Match: A0A6J1C3X8 (uncharacterized protein LOC111007177 OS=Momordica charantia OX=3673 GN=LOC111007177 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-35
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. ExPASy TrEMBL
Match: A0A5D3DZA2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002170 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.1e-34
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKE+ELGRQQAPGTCPFCQGKVYAIDVER+WKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKEQELGRQQAPGTCPFCQGKVYAIDVERQWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. ExPASy TrEMBL
Match: A0A0A0LUS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G426700 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.1e-34
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKE+ELGRQQAPGTCPFCQGKVYAIDVER+WKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKEQELGRQQAPGTCPFCQGKVYAIDVERQWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. ExPASy TrEMBL
Match: A0A1S3BWI2 (uncharacterized protein LOC103494230 OS=Cucumis melo OX=3656 GN=LOC103494230 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.1e-34
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVWEEKE+ELGRQQAPGTCPFCQGKVYAIDVER+WKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWEEKEQELGRQQAPGTCPFCQGKVYAIDVERQWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. ExPASy TrEMBL
Match: A0A6J1E1C1 (uncharacterized protein LOC111429909 OS=Cucurbita moschata OX=3662 GN=LOC111429909 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.2e-34
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          MWLACVW+EKEKELGRQQAPGTCPFC+GKV+AIDVERRWKLCFLPLCLKIKRKYLCTLCS
Sbjct: 1  MWLACVWDEKEKELGRQQAPGTCPFCRGKVHAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60

Query: 61 RRLELCHW 69
          RRLELCHW
Sbjct: 61 RRLELCHW 68

BLAST of Moc06g04520 vs. TAIR 10
Match: AT5G57123.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 2.4e-22
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          M L C+ +E+E ELGRQQAPG+CP+C GKV  +DVER+W  CF+PLC KIKRKY C+ C 
Sbjct: 1  MCLVCLCDEEETELGRQQAPGSCPYCGGKVQMLDVERKWMFCFVPLCFKIKRKYSCSSCD 60

Query: 61 RRLELCH 68
          RRL L H
Sbjct: 61 RRLVLYH 67

BLAST of Moc06g04520 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-19
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          M L  V+ E++ ELGRQQAPG CP+C GKV A+D+E +W  CFLPLC K+KRKY C+ C 
Sbjct: 1  MCLEVVYHEEKTELGRQQAPGMCPYCGGKVSAVDIETKWLFCFLPLCFKVKRKYSCSSCE 60

Query: 61 RRLEL 66
          R L L
Sbjct: 61 RHLVL 65

BLAST of Moc06g04520 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-13
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 1  MWLACVWEEKEKELGRQQAPGTCPFCQGKVYAIDVERRWKLCFLPLCLKIKRKYLCTLCS 60
          M L  V ++ E+ +GR  APG CP+C G V  +DV  +W+ CF+PL  K KR++LC+ C 
Sbjct: 1  MCLVFVCDQDERVIGRYAAPGACPYCGGAVQVVDVNSQWRFCFVPLSNKSKRRHLCSTCG 60

Query: 61 RRL 64
          +RL
Sbjct: 61 KRL 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022135123.15.2e-35100.00uncharacterized protein LOC111007177 [Momordica charantia][more]
XP_038879931.11.2e-3498.53uncharacterized protein LOC120071640 [Benincasa hispida][more]
XP_004146338.14.4e-3497.06uncharacterized protein LOC101203895 [Cucumis sativus] >XP_008453548.1 PREDICTED... [more]
XP_022921752.11.3e-3395.59uncharacterized protein LOC111429909 [Cucurbita moschata][more]
KAG6589683.11.3e-3395.59hypothetical protein SDJN03_15106, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C3X82.5e-35100.00uncharacterized protein LOC111007177 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A5D3DZA22.1e-3497.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LUS92.1e-3497.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G426700 PE=4 SV=1[more]
A0A1S3BWI22.1e-3497.06uncharacterized protein LOC103494230 OS=Cucumis melo OX=3656 GN=LOC103494230 PE=... [more]
A0A6J1E1C16.2e-3495.59uncharacterized protein LOC111429909 OS=Cucurbita moschata OX=3662 GN=LOC1114299... [more]
Match NameE-valueIdentityDescription
AT5G57123.12.4e-2264.18unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G29905.11.1e-1960.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G10695.11.6e-1346.03unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33320:SF13SUBFAMILY NOT NAMEDcoord: 6..65
NoneNo IPR availablePANTHERPTHR33320METHIONYL-TRNA SYNTHETASEcoord: 6..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g04520.1Moc06g04520.1mRNA