Moc06g04500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g04500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	nucleolar and coiled-body phosphoprotein 1 isoform X1
Location	chr6: 3205406 .. 3209041 (+)
RNA-Seq Expression	Moc06g04500
Synteny	Moc06g04500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAAACCCTAACGACCTCTGTAAGTCCTTCTCTTCTGGCATTGAAGCCTCGCCAAGTTCTTCTCTCCCAAACCAATATGACGCGAAAAGCCCGCGCCGAAACCCCCAAGTCCGATCAAGGCGTATCCCTGGAGCCGGAGCAGAGGACCCTTCTTCTTCACGCCGTAGCATTCTATTTGGAGCGCAATGGCTTCTCCAAATCCCTCAAAAAGTTTCGCTCCGAAGCGCAGATTGAGGTCGGTACTCGGTACTTAAAAGCGCTTTTCTCCTACATGTCTGTAAAAAGAAAGTTCAGTTTCACCCATCTCGGTGGACGTGTCCAGTTCTCGAAACGAAAACTTTTTGGTCGTGGTGGTTGATTTTGGTTTTATTCATTGGTTGCCCATTATGAATCATGCAATAGATTTCCGTAGAATGGAGTTGGGGAGTAAATTCTAGTCATGGGCATTCTCATTCTAAATGTTTTATGTTTTATTCTTGTACTTGCTGACAGTGTTCAAGTTTTATCGAACAAGTTTACTGTTAGTTAGTTATTTACAATAACATTCTGTTTTTCTTTAGTGCTGCAAAATTTTGTACTCCCAGAACTTAAGAGTGGAAGTTTCTTACAGTTTTAGACTTTTTTCTTTGGGTACGAATTGAAAAAAATGTAAAATCTAAGTAGAAGAAGGTGCTGTGCGTAGTTACTAAATGGAGAAGTTAAATTAAATTATTTTCATTTGTGGAGTGCGACTATAGAGTTCGCTTTCTCTACTGGCAGGGATACTGTTCTTGAAAGCTTATCATTGCCTAGAGAATATACATATATATTATATATATATATATATATATATTTATTTTTTTTTTTGGTTTTCTAGAGAATGTACATATTAGTTAACCATGTGTATTATTTCTCTTAATGAAAGCTTAGATTTTTTTGTCAATAGAATGCAAAATTATTGGTTTTTGGAAATTGGTTGGTCGCAATATTTAAGTTCTCCACCCTTTAATGAATCTTCTGTTGCAAGAATTTTTCTCCTACTACTCTTTCATTTCGAAAATTAATTTTGTCCATCATCTATGTTGAAACAATTGCCTTTTTGTTGCCATTTGTGCAGAAGGATTCTTCAAAGGATTTCTTGATTAGTCTGGAAGAAATGTGCCACGAGTATTTAAAGAAATGGTAGGACCAGAGCTTCTCCCGATTCTTGTATGTTGAGTTTCACGTTTTTTTTAGTTAATATGAGTCAAGTTATTGATTATCCCTAGTAGAATAGCCCTTCTAAATGCTGTTTTGAGCTTGCTGTATAATGCTGTTTAAGAAAATTAACAAATTGCAAATAATCTGTATGGCTCGGTCTTCTTCTTCTTCTTCTTCTTCTTTTTATTTATTTTTAAATTTTTTGTTTGTTAATTTGAGGAATACAGTTCTGAATAGGTATAAACTGCTAAAGCATGCTTTTACATGGTAATGCATGTATATCATGGATGTTACAGATAACTTATTTTCAAAGCAATTGCTTGGTCTGCAGAGCCTAAAAATCAATGTTCCCATTTTGTTTCATCATAGATGTCCCTAGATTTTTGTATCTATGTTGGAAGTGATAGTATTTGTGACATTGGTTGTTGTCTAGATGCGGACAATCCATCTCCATGCTAATAATGTCATGTTGCATCTCCATCTCCATGGAAATAAATTAATTTACCTAACTTGAAATTCTATTGTGCAGTAGTCAAGCCATCACAACTCAAAATAAACAAGGTATCCTCATGTCGTCTACCTTCTCTAAATTTATTAACTTTTACAATTTAAAAATCTTTGCTATGTTTACTTTTCTTATTTTTAATACCACACGAAATGATTGATTTTAATTGCACATCTCTTTTTGTGATGGATTTGATCTAGTAAATGTAGAAACAGTGAAGGAGGTTGCTGATGATAACGTTCCTGAAGCACAAGAGGAGCCTAAAAAGAAGTCCAAGAATAAAAAAACGAAAAAGGACATGGTTCCTGAAACACATGCTGACACTGTAGAGAAGGAGAAATCAGAATCTGTCCATGTGGAGAGTTTAAAAAATTCCAAGGGCACAGAACCTCCGGAAGGCACTACTGTCCACGAGGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGTCTTGTGCTACAATTTCCGATGACAATGTTTCAGGCGATTCTCAAGCTGTTGACTCCATCACATGGAATGGTAATGCCATAACTCTTGAAGAGAAGGTTGCCAAATCCAAAGCTAAGAAGAAAAAGGATGGCCAACATTTGTGTGACGAAAATTCAAACCAGCTCATGACTGAAAATTTAGAGGGAACTGTGAATAAAAATGGTGGTATCAAGACTGTACATGAAGACGAAAATAACGACCACTCTAAGAAAAGAAAAAGGTTGGCTTCTGAAGATCATGACAGTCATACCGTTGATGAGAAAGTAACTGAAGATGTCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGCAATAATGGCGTGCAGTCCACAAAAGTCAATGCTTCAGTGGAGACTGATGTAAATGCTGGAAGTAGGGGCACAAGCAATGAGCTTTCTCAGCAGACAATTGAGAATGTTGAGAAAACTGCAGAGAGAACTTCTACAAAGAAAGCTATGAAGAAACATTCAAATGGCTCCACTGAGGTATGGTTTATATTGTCATTACGTAGAGATCGACTTCTTCTACCCAAATGCCTTGATGAATGCAATATGCATGCTAAATGCAGAAGATATTGTTGCTAAATATTTTGGATGTAAAACGTTACTTTCGATGGTTTAAAGGGATTACAACTGCGTCAAAGGAGACACTTTAAAGAAGTGAAAAAAACATAATTAACTTGTTACTTAGTGTATCTAAGTTATACCAACTCCATGAGCTTTCTAAATATCTCACAAATAGCTGCTCTTCTGCACCCAAGTTTCATTTACACTGGATCCAAAATCAACTGTACTGATAGACAGCATAATTGCAGCCAAAGACCATCAATGCATTTCAAAGGGTGAAAGTAGATGCCGTGACATTTGCTGATGAGAAACTTGCAGATAATTCTTATTGGGCAAAGGTGTGATTTACAGCTTATTATTGGCCTTTTTGCCGCTGCATTTTTCACCAGGATCTCTTGTTTCTTATTTCCAATCTATCAAACCGTGCAGGGTGGTGCGGAGACTGGGTACGGTGCAAAAGCTCAAGAAGTTCTTGGGCAGGTTAAAGGGAGGTAATTTCCTTTTTCTCTGAATTCTTCTCTTCCATTTCTACTTTTGCGGTTAGTTCCTGTTTAAGGAAAAGGCAGGAGGGTGAGGGAAGGGGGGAACAAATTTTGAAACTCTCAAATTTACTTGTATTCTGAGAGTGAAAAAATGCTGCTGCAATATTGTGAGTCCCTTCATCTTCTTATCAGACAAAACAAAACACATGCGTGGAGGGAGCTTTGTTATATTTTCCAACTTAAAATACAAGCTACTTGACTTATAATTTACTATTTCTCAGGGGTTTTCGACATGAAAAGACCAAGAAGAAGCGTGGGTCGTACCGGGGCGGAGTTATCGATCTGCAATCTCACTCAGTAAAGTTCAATTACTCGGACGATGATTGA

mRNA sequence

ATGTCCCAAACCCTAACGACCTCTGTAAGTCCTTCTCTTCTGGCATTGAAGCCTCGCCAAGTTCTTCTCTCCCAAACCAATATGACGCGAAAAGCCCGCGCCGAAACCCCCAAGTCCGATCAAGGCGTATCCCTGGAGCCGGAGCAGAGGACCCTTCTTCTTCACGCCGTAGCATTCTATTTGGAGCGCAATGGCTTCTCCAAATCCCTCAAAAAGTTTCGCTCCGAAGCGCAGATTGAGAAGGATTCTTCAAAGGATTTCTTGATTAGTCTGGAAGAAATGTGCCACGAGTATTTAAAGAAATGTAGTCAAGCCATCACAACTCAAAATAAACAAGTAAATGTAGAAACAGTGAAGGAGGTTGCTGATGATAACGTTCCTGAAGCACAAGAGGAGCCTAAAAAGAAGTCCAAGAATAAAAAAACGAAAAAGGACATGGTTCCTGAAACACATGCTGACACTGTAGAGAAGGAGAAATCAGAATCTGTCCATGTGGAGAGTTTAAAAAATTCCAAGGGCACAGAACCTCCGGAAGGCACTACTGTCCACGAGGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGTCTTGTGCTACAATTTCCGATGACAATGTTTCAGGCGATTCTCAAGCTGTTGACTCCATCACATGGAATGGTAATGCCATAACTCTTGAAGAGAAGGTTGCCAAATCCAAAGCTAAGAAGAAAAAGGATGGCCAACATTTGTGTGACGAAAATTCAAACCAGCTCATGACTGAAAATTTAGAGGGAACTGTGAATAAAAATGGTGGTATCAAGACTGTACATGAAGACGAAAATAACGACCACTCTAAGAAAAGAAAAAGGTTGGCTTCTGAAGATCATGACAGTCATACCGTTGATGAGAAAGTAACTGAAGATGTCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGCAATAATGGCGTGCAGTCCACAAAAGTCAATGCTTCAGTGGAGACTGATGTAAATGCTGGAAGTAGGGGCACAAGCAATGAGCTTTCTCAGCAGACAATTGAGAATGTTGAGAAAACTGCAGAGAGAACTTCTACAAAGAAAGCTATGAAGAAACATTCAAATGGCTCCACTGAGCCAAAGACCATCAATGCATTTCAAAGGGTGAAAGTAGATGCCGTGACATTTGCTGATGAGAAACTTGCAGATAATTCTTATTGGGCAAAGGGTGGTGCGGAGACTGGGTACGGTGCAAAAGCTCAAGAAGTTCTTGGGCAGGTTAAAGGGAGGGGTTTTCGACATGAAAAGACCAAGAAGAAGCGTGGGTCGTACCGGGGCGGAGTTATCGATCTGCAATCTCACTCAGTAAAGTTCAATTACTCGGACGATGATTGA

Coding sequence (CDS)

ATGTCCCAAACCCTAACGACCTCTGTAAGTCCTTCTCTTCTGGCATTGAAGCCTCGCCAAGTTCTTCTCTCCCAAACCAATATGACGCGAAAAGCCCGCGCCGAAACCCCCAAGTCCGATCAAGGCGTATCCCTGGAGCCGGAGCAGAGGACCCTTCTTCTTCACGCCGTAGCATTCTATTTGGAGCGCAATGGCTTCTCCAAATCCCTCAAAAAGTTTCGCTCCGAAGCGCAGATTGAGAAGGATTCTTCAAAGGATTTCTTGATTAGTCTGGAAGAAATGTGCCACGAGTATTTAAAGAAATGTAGTCAAGCCATCACAACTCAAAATAAACAAGTAAATGTAGAAACAGTGAAGGAGGTTGCTGATGATAACGTTCCTGAAGCACAAGAGGAGCCTAAAAAGAAGTCCAAGAATAAAAAAACGAAAAAGGACATGGTTCCTGAAACACATGCTGACACTGTAGAGAAGGAGAAATCAGAATCTGTCCATGTGGAGAGTTTAAAAAATTCCAAGGGCACAGAACCTCCGGAAGGCACTACTGTCCACGAGGAGGCAGGAAAGAAATCTAAGGATAAAAAGAAAAAGAAGAACAAAGAGAAGTTAGAGTCTTGTGCTACAATTTCCGATGACAATGTTTCAGGCGATTCTCAAGCTGTTGACTCCATCACATGGAATGGTAATGCCATAACTCTTGAAGAGAAGGTTGCCAAATCCAAAGCTAAGAAGAAAAAGGATGGCCAACATTTGTGTGACGAAAATTCAAACCAGCTCATGACTGAAAATTTAGAGGGAACTGTGAATAAAAATGGTGGTATCAAGACTGTACATGAAGACGAAAATAACGACCACTCTAAGAAAAGAAAAAGGTTGGCTTCTGAAGATCATGACAGTCATACCGTTGATGAGAAAGTAACTGAAGATGTCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGCAATAATGGCGTGCAGTCCACAAAAGTCAATGCTTCAGTGGAGACTGATGTAAATGCTGGAAGTAGGGGCACAAGCAATGAGCTTTCTCAGCAGACAATTGAGAATGTTGAGAAAACTGCAGAGAGAACTTCTACAAAGAAAGCTATGAAGAAACATTCAAATGGCTCCACTGAGCCAAAGACCATCAATGCATTTCAAAGGGTGAAAGTAGATGCCGTGACATTTGCTGATGAGAAACTTGCAGATAATTCTTATTGGGCAAAGGGTGGTGCGGAGACTGGGTACGGTGCAAAAGCTCAAGAAGTTCTTGGGCAGGTTAAAGGGAGGGGTTTTCGACATGAAAAGACCAAGAAGAAGCGTGGGTCGTACCGGGGCGGAGTTATCGATCTGCAATCTCACTCAGTAAAGTTCAATTACTCGGACGATGATTGA

Protein sequence

MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFYLERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKEVADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGTTVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSKAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHTVDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTAERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD

Homology

[Close]

BLAST of Moc06g04500 vs. NCBI nr
Match: XP_022135459.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Momordica charantia])

HSP 1 Score: 860.9 bits (2223), Expect = 5.0e-246
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 463

[Close]

BLAST of Moc06g04500 vs. NCBI nr
Match: XP_022135460.1 (suppressor protein SRP40 isoform X2 [Momordica charantia])

HSP 1 Score: 854.7 bits (2207), Expect = 3.6e-244
Identity = 462/463 (99.78%), Postives = 462/463 (99.78%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC QAITTQNKQVNVETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC-QAITTQNKQVNVETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 462

[Close]

BLAST of Moc06g04500 vs. NCBI nr
Match: XP_022135461.1 (nucleolar and coiled-body phosphoprotein 1 isoform X3 [Momordica charantia])

HSP 1 Score: 850.1 bits (2195), Expect = 8.8e-243
Identity = 460/463 (99.35%), Postives = 460/463 (99.35%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQ   ETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQ---ETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 460

[Close]

BLAST of Moc06g04500 vs. NCBI nr
Match: XP_022135462.1 (nucleolar and coiled-body phosphoprotein 1 isoform X4 [Momordica charantia])

HSP 1 Score: 844.0 bits (2179), Expect = 6.3e-241
Identity = 459/463 (99.14%), Postives = 459/463 (99.14%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC QAITTQNKQ   ETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC-QAITTQNKQ---ETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 459

[Close]

BLAST of Moc06g04500 vs. NCBI nr
Match: XP_023515601.1 (nucleolar and coiled-body phosphoprotein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.0 bits (1499), Expect = 4.5e-162
Identity = 343/466 (73.61%), Postives = 379/466 (81.33%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPK-SDQGVSLEPEQRTLLLHAVAF 60
           MS+TLT SV+PSLLA KPRQVLLS   M ++  A+TPK +D+  SL PEQRTLLLHAVAF
Sbjct: 1   MSRTLTNSVTPSLLAFKPRQVLLSHHAMKQRNDAQTPKFADEAASLHPEQRTLLLHAVAF 60

Query: 61  YLERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVK 120
           +LERNGFSK+LKKFRSEAQIEKDSSK+ L+SLEEMCH++ KK SQA+T QNK V+ E + 
Sbjct: 61  FLERNGFSKTLKKFRSEAQIEKDSSKELLLSLEEMCHKHFKKGSQAVTPQNKPVDEEMMT 120

Query: 121 EVADDNVPEAQEEPKKKSKN-KKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPE 180
           EVADD VPE QEEP KKSK+ KK KK+ V        +KEKSES HVESLKNS GTEP E
Sbjct: 121 EVADDRVPEEQEEPAKKSKDKKKIKKNAV-------ADKEKSESAHVESLKNSNGTEPSE 180

Query: 181 GTTVHEEAGKKSKDKKKKKNKEKLESCATISDD-NVSGDSQAVDSITWNGNAITLEEKVA 240
           GTTVHEEAGKKSKDKKKKKNKEK+E+ ATI DD  VS DSQAVDS   NGN  TL+EKV 
Sbjct: 181 GTTVHEEAGKKSKDKKKKKNKEKIEAVATIPDDVTVSRDSQAVDSNGLNGNVATLDEKVV 240

Query: 241 KSKAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHD 300
           KSK+KKKKDG+HL D NSNQL           N G K +HE+E+ND+SKKRKRLASED+D
Sbjct: 241 KSKSKKKKDGRHLSDTNSNQL-----------NDGTKMLHEEEHNDNSKKRKRLASEDND 300

Query: 301 SHTVDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVE 360
           SH VDEK TEDVKRRKLEGSKGCN+GV STKV+               NELSQ+T  +VE
Sbjct: 301 SHAVDEKETEDVKRRKLEGSKGCNDGVLSTKVDV--------------NELSQET--DVE 360

Query: 361 KTAERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGA 420
           KTAE+TS+KK  KK SNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGA
Sbjct: 361 KTAEKTSSKKPWKKSSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGA 420

Query: 421 KAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           KAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Sbjct: 421 KAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 432

[Close]

BLAST of Moc06g04500 vs. ExPASy Swiss-Prot
Match: E9Q5C9 (Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-07
Identity = 110/410 (26.83%), Postives = 181/410 (44.15%), Query Frame = 0


Query: 71  KKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNK------QVNVETVKEVADD 130
           KK  ++ Q   DSS D     +    E  K  ++ + ++        +   E+  + +D 
Sbjct: 319 KKAAAQTQ-PADSSDDSSDDSDSSSEEEKKPPAKTVVSKTPAKAAPVKKKAESSSDSSDS 378

Query: 131 NVPEAQEEPKKKSKNKKTKKDMVPETHA----DTVEKEKSESVHVESLK-NSKGTEPPEG 190
           +  E +   K  S  K  K  + P+  A     T ++    +   +S K +S  +E    
Sbjct: 379 DSSEDEAPAKPVSTTKSPKPAVTPKPSAAKAVTTPKQPAGSNQKPQSRKADSSSSEEESS 438

Query: 191 TTVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKS 250
           ++  EEA KKS    K K   K  +         +GDS + DS   + ++   EEK  K 
Sbjct: 439 SSEEEEASKKSATTPKAKVTAK--AAPAKQAPQAAGDSSS-DS---DSSSSEEEEKTPKP 498

Query: 251 KAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSH 310
            AKKK  G       +        +     +    +   +++++  KK+K  A+      
Sbjct: 499 PAKKKAAG------GAVSTPAPGKKAEAKSSSSSSSSSSEDSSEEEKKKKPKAT------ 558

Query: 311 TVDEKVTEDVKRRKLEGSKGCNNG---VQSTKVNASVETDVNAGSRGTSNELSQQTIENV 370
                 T  ++  K  G+    NG    +S +     ET+    + GT     ++  +N 
Sbjct: 559 ------TPKIQASKANGTPASLNGKAAKESEEEEEEEETEEKKKAAGTKPGSGKKRKQN- 618

Query: 371 EKTAERTSTKKAMK-KHSNGSTEPK-------TINAFQRVKVDAVTFADEKLADNSYWAK 430
            +TA+  +T +A K K    +T PK         + F+RV+ + +   D ++ADNS+ AK
Sbjct: 619 -ETADEATTPQAKKVKLETPNTFPKRKKGERRASSPFRRVREEEIE-VDSRVADNSFDAK 678

Query: 431 GGAETGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 459
            GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +SVKF+
Sbjct: 679 RGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 700

[Close]

BLAST of Moc06g04500 vs. ExPASy Swiss-Prot
Match: Q14978 (Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 9.5e-06
Identity = 99/393 (25.19%), Postives = 167/393 (42.49%), Query Frame = 0


Query: 111 KQVNVETVKEVADDNVPEAQEEPKKKSK------------NKKTKKDMVPETHADTVEKE 170
           KQ  VE+ ++ +D++   ++EE K  +K             KK  +     + +D+ E +
Sbjct: 315 KQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDD 374

Query: 171 KSESVHVESLKNSKGTEPPEGTTVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQ 230
           ++ S    + KNS  +  P  TT        +  K+     +KL +    S  +    S 
Sbjct: 375 EAPSKPAGTTKNS--SNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSS 434

Query: 231 AVDSITWNGNAITLEEKVAKS----KAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIK 290
           + +  T    A T  +  AK+     AK+   G      +S+   +E  E   +K+   K
Sbjct: 435 SEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKK 494

Query: 291 TVHEDENNDHSKK---RKRLASEDHDSHTVDEKVTEDVKRRKLEGSKGCNNGVQSTKVNA 350
              +        K    K+  +E  +S + D+   E+ ++ K +GS       Q+ K N 
Sbjct: 495 KPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSP----RPQAPKANG 554

Query: 351 SVETDVNAGSRGTSNELSQQTIENVEKTAERTSTKKAMKKHSNGST-------------- 410
              T       G + + S++  E  +K A   S   ++KK                    
Sbjct: 555 ---TSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKL 614

Query: 411 ------------EPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQEVLGQ 459
                       E +  + F+RV+ + +   D ++ADNS+ AK GA   +G +A +VL  
Sbjct: 615 QTPNTFPKRKKGEKRASSPFRRVREEEIE-VDSRVADNSFDAKRGAAGDWGERANQVLKF 674

[Close]

BLAST of Moc06g04500 vs. ExPASy Swiss-Prot
Match: P41777 (Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc1 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.8e-05
Identity = 103/412 (25.00%), Postives = 168/412 (40.78%), Query Frame = 0


Query: 67  SKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQ--------NKQVNVETV 126
           ++S KK  ++ Q   DSS D     +    E  K  ++ + ++         K+    + 
Sbjct: 316 AQSPKKAAAQTQ-PADSSADSSEESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSSD 375

Query: 127 KEVADDNVPEAQEEPKKKSKNKKTKKDMVPETHA----DTVEKEKSESVHVESLKNSKGT 186
              +D +  EA  +P   +K+  +K  + P+  A     T ++        +S K    +
Sbjct: 376 SSDSDSSEDEAPAKPVSATKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSS 435

Query: 187 EPPEGTTVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEE 246
              E ++  EEA KKS    K +   K            +G   + DS     ++ + EE
Sbjct: 436 SEEESSSSEEEATKKSVTTPKARVTAKAAPSLPAKQAPRAGGDSSSDS----ESSSSEEE 495

Query: 247 KVAKSKAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASE 306
           K    K   KK            +     E + + +       ED + +  KK K     
Sbjct: 496 KKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSSS-----EDSSEEEKKKPK----- 555

Query: 307 DHDSHTVDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIE 366
                    K T   +  K  G     NG ++ K +   E D     +    +       
Sbjct: 556 --------SKATPKPQAGKANGVPASQNG-KAGKESEEEEEDTEQNKKAAGTKPGSGKKR 615

Query: 367 NVEKTAERTSTKKAMK-KHSNGSTEPK-------TINAFQRVKVDAVTFADEKLADNSYW 426
              +TA+  +T ++ K K    +T PK         + F+RV+ + +   D ++ADNS+ 
Sbjct: 616 KHNETADEAATPQSKKVKLQTPNTFPKRKKGEKRASSPFRRVREEEIE-VDSRVADNSFD 675

Query: 427 AKGGAETGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFN 459
           AK GA   +G +A +VL   KG+ FRHEKTKKKRGSYRGG I +Q +SVKF+
Sbjct: 676 AKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 702

[Close]

BLAST of Moc06g04500 vs. ExPASy TrEMBL
Match: A0A6J1C1H7 (nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007414 PE=4 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 2.4e-246
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 463

[Close]

BLAST of Moc06g04500 vs. ExPASy TrEMBL
Match: A0A6J1C146 (suppressor protein SRP40 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007414 PE=4 SV=1)

HSP 1 Score: 854.7 bits (2207), Expect = 1.7e-244
Identity = 462/463 (99.78%), Postives = 462/463 (99.78%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC QAITTQNKQVNVETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC-QAITTQNKQVNVETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 462

[Close]

BLAST of Moc06g04500 vs. ExPASy TrEMBL
Match: A0A6J1C0U0 (nucleolar and coiled-body phosphoprotein 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007414 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 4.3e-243
Identity = 460/463 (99.35%), Postives = 460/463 (99.35%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQ   ETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQ---ETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 460

[Close]

BLAST of Moc06g04500 vs. ExPASy TrEMBL
Match: A0A6J1C2R9 (nucleolar and coiled-body phosphoprotein 1 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007414 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 3.1e-241
Identity = 459/463 (99.14%), Postives = 459/463 (99.14%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60
           MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSDQGVSLEPEQRTLLLHAVAFY 60

Query: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVKE 120
           LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC QAITTQNKQ   ETVKE
Sbjct: 61  LERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKC-QAITTQNKQ---ETVKE 120

Query: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180
           VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT
Sbjct: 121 VADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEGT 180

Query: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240
           TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK
Sbjct: 181 TVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKSK 240

Query: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300
           AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT
Sbjct: 241 AKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSHT 300

Query: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360
           VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA
Sbjct: 301 VDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKTA 360

Query: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420
           ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ
Sbjct: 361 ERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETGYGAKAQ 420

Query: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD
Sbjct: 421 EVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 459

[Close]

BLAST of Moc06g04500 vs. ExPASy TrEMBL
Match: A0A6J1JA31 (nucleolar and coiled-body phosphoprotein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484917 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 5.9e-160
Identity = 341/469 (72.71%), Postives = 376/469 (80.17%), Query Frame = 0


Query: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKS-DQGVSLEPEQRTLLLHAVAF 60
           MS+TLT SVSPSLLA KPRQVLLS   M ++  A+TPKS D+  SL PEQRTLLLHAVAF
Sbjct: 1   MSRTLTNSVSPSLLAFKPRQVLLSHHAMKQRNDAQTPKSADEAASLHPEQRTLLLHAVAF 60

Query: 61  YLERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVK 120
           +LE NGFSK+LKKFRSEAQIEKDSSK+ L+SLEEMCH++ KK SQA+T QNK V+ E V 
Sbjct: 61  FLEHNGFSKTLKKFRSEAQIEKDSSKELLLSLEEMCHKHFKKFSQAVTPQNKPVDEEIVT 120

Query: 121 EVADDNVPEAQEEPKKKSKN-KKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPE 180
           EV DD VPE QEEP KKSK+ KK KK+ V        +KEKSE  HVESLKNS GTEP E
Sbjct: 121 EVTDDRVPEEQEEPAKKSKDKKKIKKNTV-------ADKEKSEPAHVESLKNSNGTEPSE 180

Query: 181 GTTVHEEAGKKSKDKKKKKNKEKLESCATISDD-NVSGDSQAVDSITWNGNAITLEEKVA 240
           GTTVHEEAGKKSKDKKKKKNKEK+++ ATI DD  V+ DSQAVDS   NGN  TL+EKV 
Sbjct: 181 GTTVHEEAGKKSKDKKKKKNKEKIKTVATIPDDVTVARDSQAVDSNGLNGNVATLDEKVV 240

Query: 241 KSKAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASED-- 300
           KSK+KKKKDG+HL D NSNQL           N G K +HE+E+ND+SKKRKRLASED  
Sbjct: 241 KSKSKKKKDGRHLSDTNSNQL-----------NDGTKMLHEEEHNDNSKKRKRLASEDND 300

Query: 301 -HDSHTVDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIE 360
            HDSH VD+K TEDVKRRKLEGSKGCN+GV STKV+               NELSQ+T  
Sbjct: 301 SHDSHAVDDKETEDVKRRKLEGSKGCNDGVLSTKVDV--------------NELSQET-- 360

Query: 361 NVEKTAERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETG 420
           +VEKTAE+TS+KK  KK SNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETG
Sbjct: 361 DVEKTAEKTSSKKPWKKSSNGSTEPKTINAFQRVKVDAVTFADEKLADNSYWAKGGAETG 420

Query: 421 YGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDDD 464
           YGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSD+D
Sbjct: 421 YGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNYSDED 435

[Close]

BLAST of Moc06g04500 vs. TAIR 10
Match: AT5G57120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). )

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-38
Identity = 163/424 (38.44%), Postives = 211/424 (49.76%), Query Frame = 0


Query: 44  SLEPEQRTLLLHAVAFYLERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYL-KKC 103
           +LE EQ+ LLL +VA YLER GFSK  KK  SEA+IEK      L  LEE+  E+L K+ 
Sbjct: 9   ALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEKKELNTSLPDLEEIFSEFLNKRD 68

Query: 104 SQAITTQNKQVN-VETVKEVADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSE 163
            +A    N + N VE V+ V  D         KKK KNK+TK ++  E      EK K  
Sbjct: 69  HEAAANGNTEANVVEAVENVKKD---------KKKKKNKETKVEVTEE------EKVKET 128

Query: 164 SVHVESLKNSKGTEPPEGTTVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVD 223
              +E                    G K K KKKK+ K K      ++++    ++ AV 
Sbjct: 129 DAVIED-------------------GVKEK-KKKKETKVK------VTEEEKVKETDAV- 188

Query: 224 SITWNGNAITLEEKVAKSKAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDEN 283
                     +E+ V + K KK K                            K+V  D++
Sbjct: 189 ----------IEDGVKEKKKKKSKS---------------------------KSVEADDD 248

Query: 284 NDH-SKKRKRLASEDHDSHTVDEKVTEDVKRRKLEGSKGCNN-GVQSTKVNASVETDVNA 343
            +  SKKRKR   E+    T D+   E+ KRRK E +   N+ GVQ T V    ET  N 
Sbjct: 249 KEKVSKKRKRSEPEETKEETEDD--DEESKRRKKEENVVENDEGVQETPVK-ETETKENG 308

Query: 344 GSRGTSNELSQQTIENVEKTAERTSTKKAMKKHSNGSTEPKTINAFQRVKVDAVTFADEK 403
                          N EK+  +++ +K+ K  SN S EPK    FQRV VD + + +  
Sbjct: 309 ---------------NAEKSETKSTNQKSGKGLSN-SKEPK--KPFQRVNVDEIVYTEN- 329

Query: 404 LADNSYWAKGGAETGYGAKAQEVLGQVKGRGFRHEKTKKKRGSYRGGVIDLQSHSVKFNY 463
              NSY++KGGAE GYG KAQEVLGQV+GR FRHEKTKKKRGSYRGG+ID +SHS KFN 
Sbjct: 369 --SNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGGLIDQESHSTKFNN 329

The following BLAST results are available for this feature:

BLAST of Moc06g04500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135459.1	5.0e-246	100.00	nucleolar and coiled-body phosphoprotein 1 isoform X1 [Momordica charantia]	[more]
XP_022135460.1	3.6e-244	99.78	suppressor protein SRP40 isoform X2 [Momordica charantia]	[more]
XP_022135461.1	8.8e-243	99.35	nucleolar and coiled-body phosphoprotein 1 isoform X3 [Momordica charantia]	[more]
XP_022135462.1	6.3e-241	99.14	nucleolar and coiled-body phosphoprotein 1 isoform X4 [Momordica charantia]	[more]
XP_023515601.1	4.5e-162	73.61	nucleolar and coiled-body phosphoprotein 1-like isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Moc06g04500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E9Q5C9	1.0e-07	26.83	Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=...	[more]
Q14978	9.5e-06	25.19	Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1...	[more]
P41777	2.8e-05	25.00	Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc...	[more]

BLAST of Moc06g04500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1H7	2.4e-246	100.00	nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1C146	1.7e-244	99.78	suppressor protein SRP40 isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110074...	[more]
A0A6J1C0U0	4.3e-243	99.35	nucleolar and coiled-body phosphoprotein 1 isoform X3 OS=Momordica charantia OX=...	[more]
A0A6J1C2R9	3.1e-241	99.14	nucleolar and coiled-body phosphoprotein 1 isoform X4 OS=Momordica charantia OX=...	[more]
A0A6J1JA31	5.9e-160	72.71	nucleolar and coiled-body phosphoprotein 1-like isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of Moc06g04500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57120.1	1.5e-38	38.44	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 49..81 e-value: 0.0037 score: 26.5
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 49..81 score: 9.264356
IPR007718	Srp40, C-terminal	PFAM	PF05022	SRP40_C	coord: 385..457 e-value: 3.5E-27 score: 95.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..358
None	No IPR available	PANTHER	PTHR23216	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 6..462
None	No IPR available	PANTHER	PTHR23216:SF2	LIS1 HOMOLOGY MOTIF, SRP40-RELATED	coord: 6..462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g04500.1	Moc06g04500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005515	protein binding