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Moc06g03920 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCAGGGGCAGAGTGTGCATGAGGAATTTGCTTATGGGCAGATGATAGATTCACTTTGTAAAGCTAGAAGACATCATGGGGCCTCAAGAATTGCATATATAATGAGGAAGAGAGGGTTTAATCCTGGTTTACTCTCGCATAATTCTATTAGCAAGGAATTGAATTTGGGTACTCACCATCTGAACTTACAAATAAGGTTCTTGTAGAAGGTCTTTGCCTAGAGATAGACATCCAGGCAAAGGAAGTTTTTCAAATAATGATAGACAAGGAAGGTGTCGACAGAACTTGAATTTACAACATATACTTGAGAGCTATTTGCCTTGCAAATAAGTCAACCGAGCTCTTAAATACATTTGTTGTAATGCTTCAAACCAATTGTCAATCTGATGTTATTACCCTGAATACAGTTATCAAGGGATTTTGTCATATTGGAAGCATTGAAAAAGCTCTAAAGGTATTAAATGATATGATGATTTGTCAATTTTGTGCCCCTGATTATGTGAACTTCACGACTATTATATATGGGTTACTGAATGTTGGGAGGATCCAGGAATCTCTTGATATATTATATAAAGTAATGCGAGAAAAAGGCATTATGTTGCGTGTTGTTACATATAATGCTCTACTATTTGAGGTTTATTTAAATTTCATACCTTTTGACAGAATGGTTAGGAATGGTGCCTGGCAGACAGTACAACATATGCTGTGGTAATTGATGGGCTATGTGATTCCAATAAAATTGAAGAAGCTAAGAGATTCTGGAAAGATATAGTCTGGCCGTCAAAGATTCGTAATAGTTTTGTCTATTCTACTAAGGGCTTTGCAACAATGGAAAATTTAGTGAAGCTTGCGATTTCCTATATGAACTAGTAGACTCTGGGGCTACAATATTGTGATCAATACTGCGTGTAAGTTTGGACTAAAAGGAGAAGCATATCAACTAGTCACAGAGATGAGGAATAATGGGCTAGCCCCTGGTGCCATAACTTGGAGGATTCTTCACAAATTACATCAAAGTGAGACGATGAAATCACCTCCCAAGGATTTAACTAGTCAACCTAGAGATGGCCGTGACCTGACAGATTTGAAGGATTAA ATGCCTCAGGGGCAGAGTGTGCATGAGGAATTTGCTTATGGGCAGATGATAGATTCACTTTGTAAAGCTAGAAGACATCATGGGGCCTCAAGAATTGCATATATAATGAGGAAGAGAGGGTTTAATCCTGGTTTACTCTCGCATAATTCTATTAGCAAGGAATTGAATTTGGGTACTCACCATCTGAACTTACAAATAAGACTCTGGGGCTACAATATTGTGATCAATACTGCGTGTAAGTTTGGACTAAAAGGAGAAGCATATCAACTAGTCACAGAGATGAGGAATAATGGGCTAGCCCCTGGTGCCATAACTTGGAGGATTCTTCACAAATTACATCAAAGTGAGACGATGAAATCACCTCCCAAGGATTTAACTAGTCAACCTAGAGATGGCCGTGACCTGACAGATTTGAAGGATTAA ATGCCTCAGGGGCAGAGTGTGCATGAGGAATTTGCTTATGGGCAGATGATAGATTCACTTTGTAAAGCTAGAAGACATCATGGGGCCTCAAGAATTGCATATATAATGAGGAAGAGAGGGTTTAATCCTGGTTTACTCTCGCATAATTCTATTAGCAAGGAATTGAATTTGGGTACTCACCATCTGAACTTACAAATAAGACTCTGGGGCTACAATATTGTGATCAATACTGCGTGTAAGTTTGGACTAAAAGGAGAAGCATATCAACTAGTCACAGAGATGAGGAATAATGGGCTAGCCCCTGGTGCCATAACTTGGAGGATTCTTCACAAATTACATCAAAGTGAGACGATGAAATCACCTCCCAAGGATTTAACTAGTCAACCTAGAGATGGCCGTGACCTGACAGATTTGAAGGATTAA MPQGQSVHEEFAYGQMIDSLCKARRHHGASRIAYIMRKRGFNPGLLSHNSISKELNLGTHHLNLQIRLWGYNIVINTACKFGLKGEAYQLVTEMRNNGLAPGAITWRILHKLHQSETMKSPPKDLTSQPRDGRDLTDLKD Homology
BLAST of Moc06g03920 vs. NCBI nr
Match: XP_022134613.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g18020 [Momordica charantia]) HSP 1 Score: 166.0 bits (419), Expect = 2.3e-37 Identity = 130/367 (35.42%), Postives = 133/367 (36.24%), Query Frame = 0
BLAST of Moc06g03920 vs. NCBI nr
Match: XP_022132241.1 (pentatricopeptide repeat-containing protein At3g18020-like [Momordica charantia] >XP_022132242.1 pentatricopeptide repeat-containing protein At3g18020-like [Momordica charantia] >XP_022132243.1 pentatricopeptide repeat-containing protein At3g18020-like [Momordica charantia] >XP_022132244.1 pentatricopeptide repeat-containing protein At3g18020-like [Momordica charantia] >XP_022132246.1 pentatricopeptide repeat-containing protein At3g18020-like [Momordica charantia]) HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25 Identity = 64/133 (48.12%), Postives = 79/133 (59.40%), Query Frame = 0
BLAST of Moc06g03920 vs. NCBI nr
Match: XP_022921380.1 (pentatricopeptide repeat-containing protein At3g18020 [Cucurbita moschata]) HSP 1 Score: 125.2 bits (313), Expect = 4.5e-25 Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of Moc06g03920 vs. NCBI nr
Match: KAG7023322.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125.2 bits (313), Expect = 4.5e-25 Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of Moc06g03920 vs. NCBI nr
Match: XP_023515599.1 (pentatricopeptide repeat-containing protein At3g18020 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.4 bits (311), Expect = 7.7e-25 Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy Swiss-Prot
Match: Q9LSK8 (Pentatricopeptide repeat-containing protein At3g18020 OS=Arabidopsis thaliana OX=3702 GN=At3g18020 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11 Identity = 40/105 (38.10%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.3e-06 Identity = 34/111 (30.63%), Postives = 52/111 (46.85%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy Swiss-Prot
Match: Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 7.1e-05 Identity = 33/133 (24.81%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy Swiss-Prot
Match: Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 38/113 (33.63%), Postives = 49/113 (43.36%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 33/126 (26.19%), Postives = 61/126 (48.41%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy TrEMBL
Match: A0A6J1C2H5 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g18020 OS=Momordica charantia OX=3673 GN=LOC111006840 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37 Identity = 130/367 (35.42%), Postives = 133/367 (36.24%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy TrEMBL
Match: A0A6J1BRQ7 (pentatricopeptide repeat-containing protein At3g18020-like OS=Momordica charantia OX=3673 GN=LOC111005146 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.8e-26 Identity = 64/133 (48.12%), Postives = 79/133 (59.40%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy TrEMBL
Match: A0A6J1E5H1 (pentatricopeptide repeat-containing protein At3g18020 OS=Cucurbita moschata OX=3662 GN=LOC111429668 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 2.2e-25 Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy TrEMBL
Match: A0A6J1JMF0 (pentatricopeptide repeat-containing protein At3g18020 OS=Cucurbita maxima OX=3661 GN=LOC111485716 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24 Identity = 62/134 (46.27%), Postives = 78/134 (58.21%), Query Frame = 0
BLAST of Moc06g03920 vs. ExPASy TrEMBL
Match: A0A5J5BFE4 (Uncharacterized protein (Fragment) OS=Nyssa sinensis OX=561372 GN=F0562_025309 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19 Identity = 77/240 (32.08%), Postives = 98/240 (40.83%), Query Frame = 0
BLAST of Moc06g03920 vs. TAIR 10
Match: AT3G18020.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 40/105 (38.10%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Moc06g03920 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07 Identity = 34/111 (30.63%), Postives = 52/111 (46.85%), Query Frame = 0
BLAST of Moc06g03920 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 48.5 bits (114), Expect = 5.0e-06 Identity = 33/133 (24.81%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Moc06g03920 vs. TAIR 10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 8.6e-06 Identity = 38/113 (33.63%), Postives = 49/113 (43.36%), Query Frame = 0
BLAST of Moc06g03920 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05 Identity = 29/118 (24.58%), Postives = 54/118 (45.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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