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Moc06g03550 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCCTCAACAGCTCCATGGGAAGAGGGATAATGGCAGTACCACCGCCAATAATGGCAACGGCAATGGCAATGGATTGTGTCCGCCTCCGTTGAAGATCAATAAGGATTCTCATTTCATCAGAAAATCCTCGTCGTCTTCCTCTTCTCCTTCCTCGTCTTCCTCTTCCACCTCGTCGCTCGTCAATGGCGTCGTAGGCGCCGGCTGCGCCAAGCCGCCGCAGCGGCATCCGGTGATTATATACACGCATTCTCCCAAAATCATCCACACGCATCCTCGAGACTTCATGGCGTTGGTTCAGAAGCTCACCGGATTGTCTCGCTCCGATGACGAAGCGGGAGCTAATTCTCCGAACGCGACGAAATGTGGCGAGGAGAATAAAATCATTAGCTCCAAAGTCGTGGTGACGAGTGACGATAATGAGTCGTCGTCCGTTGTGACGACGGATGAAAATTGCTGCGGCAGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTCGCTCCGCCGATGTTCGAGCCACCGCCGCCGCCACCGCCACCGCAAGTAGCGAGTTCTTACCTAACGAACATCCCTGTTTACAGGCCGAATTCGACGGACTTTTTGTGCTCTAATCATCAACCGTTTTTTAACTACAACGATTCTTCTTTGCTTTTTGGTGCTCCAAATATCCATTCTCTTTCGTCCGCTAATTCAACATTGAATGGAATTAATGATTTCTGCGACTATAGCGAATATTAGGTTTTTTTCTTCTTTTTCCTTTTTGTTGGGGAGGGATTATTTGACCCCATTTGATTTTGAAGCAAATAAAACAATAAAACTCGTTCCGTTCCCGAGACAAATCTCTACTGGGGAACTAATTTTTGCAATTTCGGTAGGAAAACGAGTTCCTTGAGTCAGTCACCTTAAAGAACTTCGATCAATTTTATAGAACATATAGAATATATAGTAACGGTATGATCTCCAACTTTTTTATCTTTCTATTTAACTTTTTCTATTTCTTCAACTTGTATTGGAGTATGTTTCAGAAGAGATGAAGTTTTGCAATAAAATGAAAGGAGCTGGTGCAATGGAAGTTGAGGTTCATCCAATTCAACATCTTGCCTGGTGA ATGAGCCCTCAACAGCTCCATGGGAAGAGGGATAATGGCAGTACCACCGCCAATAATGGCAACGGCAATGGCAATGGATTGTGTCCGCCTCCGTTGAAGATCAATAAGGATTCTCATTTCATCAGAAAATCCTCGTCGTCTTCCTCTTCTCCTTCCTCGTCTTCCTCTTCCACCTCGTCGCTCGTCAATGGCGTCGTAGGCGCCGGCTGCGCCAAGCCGCCGCAGCGGCATCCGGTGATTATATACACGCATTCTCCCAAAATCATCCACACGCATCCTCGAGACTTCATGGCGTTGGTTCAGAAGCTCACCGGATTGTCTCGCTCCGATGACGAAGCGGGAGCTAATTCTCCGAACGCGACGAAATGTGGCGAGGAGAATAAAATCATTAGCTCCAAAGTCGTGGTGACGAGTGACGATAATGAGTCGTCGTCCGTTGTGACGACGGATGAAAATTGCTGCGGCAGCGGCGTGGTGGAAGAAGAGATGAAGTTTTGCAATAAAATGAAAGGAGCTGGTGCAATGGAAGTTGAGGTTCATCCAATTCAACATCTTGCCTGGTGA ATGAGCCCTCAACAGCTCCATGGGAAGAGGGATAATGGCAGTACCACCGCCAATAATGGCAACGGCAATGGCAATGGATTGTGTCCGCCTCCGTTGAAGATCAATAAGGATTCTCATTTCATCAGAAAATCCTCGTCGTCTTCCTCTTCTCCTTCCTCGTCTTCCTCTTCCACCTCGTCGCTCGTCAATGGCGTCGTAGGCGCCGGCTGCGCCAAGCCGCCGCAGCGGCATCCGGTGATTATATACACGCATTCTCCCAAAATCATCCACACGCATCCTCGAGACTTCATGGCGTTGGTTCAGAAGCTCACCGGATTGTCTCGCTCCGATGACGAAGCGGGAGCTAATTCTCCGAACGCGACGAAATGTGGCGAGGAGAATAAAATCATTAGCTCCAAAGTCGTGGTGACGAGTGACGATAATGAGTCGTCGTCCGTTGTGACGACGGATGAAAATTGCTGCGGCAGCGGCGTGGTGGAAGAAGAGATGAAGTTTTGCAATAAAATGAAAGGAGCTGGTGCAATGGAAGTTGAGGTTCATCCAATTCAACATCTTGCCTGGTGA MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEEEMKFCNKMKGAGAMEVEVHPIQHLAW Homology
BLAST of Moc06g03550 vs. NCBI nr
Match: XP_022135386.1 (VQ motif-containing protein 20 [Momordica charantia]) HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81 Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Moc06g03550 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida]) HSP 1 Score: 208.0 bits (528), Expect = 7.1e-50 Identity = 128/168 (76.19%), Postives = 135/168 (80.36%), Query Frame = 0
BLAST of Moc06g03550 vs. NCBI nr
Match: XP_023007145.1 (VQ motif-containing protein 20-like [Cucurbita maxima]) HSP 1 Score: 194.9 bits (494), Expect = 6.2e-46 Identity = 127/174 (72.99%), Postives = 136/174 (78.16%), Query Frame = 0
BLAST of Moc06g03550 vs. NCBI nr
Match: KAG7021613.1 (VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.4 bits (490), Expect = 1.8e-45 Identity = 124/174 (71.26%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of Moc06g03550 vs. NCBI nr
Match: XP_023531062.1 (VQ motif-containing protein 20 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 192.2 bits (487), Expect = 4.0e-45 Identity = 124/174 (71.26%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17 Identity = 68/172 (39.53%), Postives = 88/172 (51.16%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06 Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.6e-04 Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 8.0e-04 Identity = 35/105 (33.33%), Postives = 47/105 (44.76%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy TrEMBL
Match: A0A6J1C0L6 (VQ motif-containing protein 20 OS=Momordica charantia OX=3673 GN=LOC111007349 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 9.9e-82 Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy TrEMBL
Match: A0A6J1L266 (VQ motif-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111499724 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 3.0e-46 Identity = 127/174 (72.99%), Postives = 136/174 (78.16%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy TrEMBL
Match: A0A6J1EZ55 (VQ motif-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111440881 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.0e-45 Identity = 124/174 (71.26%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.8e-44 Identity = 120/170 (70.59%), Postives = 129/170 (75.88%), Query Frame = 0
BLAST of Moc06g03550 vs. ExPASy TrEMBL
Match: A0A1S3BXM8 (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43 Identity = 119/186 (63.98%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of Moc06g03550 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein ) HSP 1 Score: 91.3 bits (225), Expect = 9.0e-19 Identity = 68/172 (39.53%), Postives = 88/172 (51.16%), Query Frame = 0
BLAST of Moc06g03550 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07 Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Moc06g03550 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein ) HSP 1 Score: 49.3 bits (116), Expect = 3.9e-06 Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of Moc06g03550 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding ) HSP 1 Score: 46.6 bits (109), Expect = 2.5e-05 Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Moc06g03550 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 ) HSP 1 Score: 45.4 bits (106), Expect = 5.7e-05 Identity = 35/105 (33.33%), Postives = 47/105 (44.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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