Moc06g03470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g03470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr6: 2467851 .. 2468216 (-)
RNA-Seq Expression	Moc06g03470
Synteny	Moc06g03470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAGGCGGCGGCGGCGGCGGCGGAGGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCGGAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGCCGGCGGGGATGGAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAAAATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGCGACGGCGGGTGA

mRNA sequence

ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAGGCGGCGGCGGCGGCGGCGGAGGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCGGAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGCCGGCGGGGATGGAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAAAATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGCGACGGCGGGTGA

Coding sequence (CDS)

ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAGGCGGCGGCGGCGGCGGCGGAGGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCGGAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGCCGGCGGGGATGGAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAAAATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGCGACGGCGGGTGA

Protein sequence

MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDLNIAVAVESDGG

Homology

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BLAST of Moc06g03470 vs. NCBI nr
Match: KAE8652459.1 (hypothetical protein Csa_013196 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 76/133 (57.14%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + EN   I  KKTKN++     AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQM-ENRAEIHEKKTKNDD-TPTPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEEEKE---------PAGMERRGKGTEVVEENGLRL 120
            +  L +SL   + AAAD++EK+EEEEE++         PA + RRGKG EVVEENGLRL
Sbjct: 61  ERGMLAKSLSAVVAAAADQQEKKEEEEEEKKGLSMAAPSPAEVSRRGKGKEVVEENGLRL 120

Query: 121 DLNIAVAVESDGG 122
           DLNIA+AV+   G
Sbjct: 121 DLNIALAVQQSDG 131

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BLAST of Moc06g03470 vs. NCBI nr
Match: KAG6589551.1 (hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-21
Identity = 77/125 (61.60%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 6   RRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRAL 65
           +R+   EN      KKTKN+E   AAA +EPTDEEVEEF+ ILRRMK A EYFG  K  L
Sbjct: 5   KRKCQSENDGKFCEKKTKNDE-TTAAAEKEPTDEEVEEFYSILRRMKRAAEYFGVEKGML 64

Query: 66  TESL---IGAAADREEKEEE-------EEEKEPAGMERRGKGTEVVEENGLRLDLNIAVA 121
           T+SL     AAADREEKEEE       E E + A M++ GKG EVV ENGLRLDLNIAVA
Sbjct: 65  TKSLRDVAAAAADREEKEEEKKGVKRAEAETDVARMKQGGKGKEVVAENGLRLDLNIAVA 124

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BLAST of Moc06g03470 vs. NCBI nr
Match: KAA0058070.1 (hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKG-TEVVEENGLR-LDL 120
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLR LDL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

[Close]

BLAST of Moc06g03470 vs. NCBI nr
Match: TYK28420.1 (hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKG-TEVVEENGLR-LDL 120
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLR LDL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

[Close]

BLAST of Moc06g03470 vs. NCBI nr
Match: RQO93794.1 (hypothetical protein POPTR_T172014 [Populus trichocarpa] >RQO93795.1 hypothetical protein POPTR_T172014 [Populus trichocarpa])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 2   GREKRRRGVPENSDG--IGVKKTKNEEQAAAAAAEE-----PTDEEVEEFFVILRRMKEA 61
           G+EKRRRG  E+  G    V+  + +E+    A E+      T+EEVEEFF ILRRM+EA
Sbjct: 19  GKEKRRRGDKESEQGRKKKVRGQEGKEEVVTVATEDEVVTVATEEEVEEFFAILRRMQEA 78

Query: 62  VEYFGGRK----RALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDL 121
            +YFG       RA  E+ +    D     EEE   + +G E      E  EENG+ LDL
Sbjct: 79  AKYFGKGSGEGWRAAVEAKVVEVIDGGGNNEEENMIQSSGAEEVAAVVEEEEENGV-LDL 138

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BLAST of Moc06g03470 vs. ExPASy TrEMBL
Match: A0A5D3DYW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00500 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKG-TEVVEENGLR-LDL 120
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLR LDL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

[Close]

BLAST of Moc06g03470 vs. ExPASy TrEMBL
Match: A0A5A7USD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003770 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKG-TEVVEENGLR-LDL 120
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLR LDL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

[Close]

BLAST of Moc06g03470 vs. ExPASy TrEMBL
Match: A0A3N7FGA1 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T172014 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.8e-07
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 2   GREKRRRGVPENSDG--IGVKKTKNEEQAAAAAAEE-----PTDEEVEEFFVILRRMKEA 61
           G+EKRRRG  E+  G    V+  + +E+    A E+      T+EEVEEFF ILRRM+EA
Sbjct: 19  GKEKRRRGDKESEQGRKKKVRGQEGKEEVVTVATEDEVVTVATEEEVEEFFAILRRMQEA 78

Query: 62  VEYFGGRK----RALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDL 121
            +YFG       RA  E+ +    D     EEE   + +G E      E  EENG+ LDL
Sbjct: 79  AKYFGKGSGEGWRAAVEAKVVEVIDGGGNNEEENMIQSSGAEEVAAVVEEEEENGV-LDL 138

[Close]

BLAST of Moc06g03470 vs. ExPASy TrEMBL
Match: A0A3N7G0A2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G054350 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 2   GREKRRRGVPENSDG--IGVKKTKNEEQAAAAAAEE-----PTDEEVEEFFVILRRMKEA 61
           G+EKR+RG  E+  G    V+  + +E+    A EE      T+EEVEEFF ILRRM+EA
Sbjct: 19  GKEKRKRGDKESEQGRKKKVRGREGKEEVVTVATEEEVVTVATEEEVEEFFAILRRMQEA 78

Query: 62  VEYFGGRK----RALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDL 121
            +YFG       RA  E+ +    D     EEE   + +G E      E  EENG+ LDL
Sbjct: 79  AKYFGKGSGEGWRAAVEAKVVEVIDGGGNNEEEIMIQSSGAEEVAAVVEEEEENGV-LDL 138

[Close]

BLAST of Moc06g03470 vs. ExPASy TrEMBL
Match: A0A2N9GJM2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27521 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.8e-05
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 1   MGREKRRR-GVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYF- 60
           M  EKR+R G  E  +G  +KK +  E+        P++EEVEEFF ILRRMK AV+YF 
Sbjct: 1   MELEKRKRGGEKEGEEGEEIKKVR--EEVGKGEGVVPSEEEVEEFFAILRRMKVAVKYFE 60

Query: 61  ----GGRKRALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDLN 112
               G   RA   +  G   D EE+EEEE++++   M+++ K     EE    LDLN
Sbjct: 61  RGGNGEGWRAALGTEEGGVVDEEEEEEEEDKRDVMMMKKKKKKGHTREEESGILDLN 115

The following BLAST results are available for this feature:

BLAST of Moc06g03470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652459.1	1.4e-22	57.14	hypothetical protein Csa_013196 [Cucumis sativus]	[more]
KAG6589551.1	1.5e-21	61.60	hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0058070.1	1.1e-19	56.92	hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]	[more]
TYK28420.1	1.1e-19	56.92	hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]	[more]
RQO93794.1	1.4e-06	41.54	hypothetical protein POPTR_T172014 [Populus trichocarpa] >RQO93795.1 hypothetica...	[more]

BLAST of Moc06g03470 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g03470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYW7	5.3e-20	56.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7USD1	5.3e-20	56.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A3N7FGA1	6.8e-07	41.54	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T172014 PE=4 SV=...	[more]
A0A3N7G0A2	1.5e-06	41.54	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G054350 PE=4 ...	[more]
A0A2N9GJM2	2.8e-05	41.03	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27521 PE=4 SV=1	[more]

BLAST of Moc06g03470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR35735:SF5	TRANSMEMBRANE PROTEIN DDB_G0274347-LIKE	coord: 1..119
IPR034577	Protein NIM1-INTERACTING 2	PANTHER	PTHR35735	PROTEIN NIM1-INTERACTING 2	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g03470.1	Moc06g03470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance