Moc06g03040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g03040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	E3 ubiquitin-protein ligase AIP2-like
Location	chr6: 2150089 .. 2150721 (+)
RNA-Seq Expression	Moc06g03040
Synteny	Moc06g03040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACACCTTCATTCTCGCACCGGCGACCGGCAGGTCTATCCTCGATCTACCGACGAATCGCATTCTTCTCTATTCCACGCCCTTATCTCCGGCGTCAACTTCCGTTCCGGCGGCCATGGAATCCAATTGAACTTGGCCAGGGATATTCTTCAACGCCAAGCCGAGCAGTCTTCTCTTTCAGCATGGGAAGAATTTACCAGTTCTAATTTAGCGATCGAGGATGCTGGTTTTTCCATACAACAATTGGATTCGGATTTCGAAAGATTGATTGCCTTACTAGAACACGAGCGTCCAAATTCCACTCCGCCAAGTACGATTCACGACGCCGACTCGAACATTTTGGAAGAGTTTTTGTCCTCAAACAATTATCCAGAAGTACAAATAGTATCTAATGGCGAATGGAGTCTCACAATTCGAACTGCAGCATCAAGAACAGTGATCGAGAGCCTTCTGTCGGTGGTTTTGAGAGAAGAAGATGTGGTTTGTTCGATTTGTATGGAATGGATGAAAATTGGAGAAGAAGCCAAACAGTTGCCCTGTATCCACAGGTATCATGGTGGATGTATTAGGGCATGGTTGGAAATTAAAAATACATGTCCAATTTGCCGCTACGAACTGCCTAAAGATTGA

mRNA sequence

ATGGCACACCTTCATTCTCGCACCGGCGACCGGCAGGTCTATCCTCGATCTACCGACGAATCGCATTCTTCTCTATTCCACGCCCTTATCTCCGGCGTCAACTTCCGTTCCGGCGGCCATGGAATCCAATTGAACTTGGCCAGGGATATTCTTCAACGCCAAGCCGAGCAGTCTTCTCTTTCAGCATGGGAAGAATTTACCAGTTCTAATTTAGCGATCGAGGATGCTGGTTTTTCCATACAACAATTGGATTCGGATTTCGAAAGATTGATTGCCTTACTAGAACACGAGCGTCCAAATTCCACTCCGCCAAGTACGATTCACGACGCCGACTCGAACATTTTGGAAGAGTTTTTGTCCTCAAACAATTATCCAGAAGTACAAATAGTATCTAATGGCGAATGGAGTCTCACAATTCGAACTGCAGCATCAAGAACAGTGATCGAGAGCCTTCTGTCGGTGGTTTTGAGAGAAGAAGATGTGGTTTGTTCGATTTGTATGGAATGGATGAAAATTGGAGAAGAAGCCAAACAGTTGCCCTGTATCCACAGGTATCATGGTGGATGTATTAGGGCATGGTTGGAAATTAAAAATACATGTCCAATTTGCCGCTACGAACTGCCTAAAGATTGA

Coding sequence (CDS)

ATGGCACACCTTCATTCTCGCACCGGCGACCGGCAGGTCTATCCTCGATCTACCGACGAATCGCATTCTTCTCTATTCCACGCCCTTATCTCCGGCGTCAACTTCCGTTCCGGCGGCCATGGAATCCAATTGAACTTGGCCAGGGATATTCTTCAACGCCAAGCCGAGCAGTCTTCTCTTTCAGCATGGGAAGAATTTACCAGTTCTAATTTAGCGATCGAGGATGCTGGTTTTTCCATACAACAATTGGATTCGGATTTCGAAAGATTGATTGCCTTACTAGAACACGAGCGTCCAAATTCCACTCCGCCAAGTACGATTCACGACGCCGACTCGAACATTTTGGAAGAGTTTTTGTCCTCAAACAATTATCCAGAAGTACAAATAGTATCTAATGGCGAATGGAGTCTCACAATTCGAACTGCAGCATCAAGAACAGTGATCGAGAGCCTTCTGTCGGTGGTTTTGAGAGAAGAAGATGTGGTTTGTTCGATTTGTATGGAATGGATGAAAATTGGAGAAGAAGCCAAACAGTTGCCCTGTATCCACAGGTATCATGGTGGATGTATTAGGGCATGGTTGGAAATTAAAAATACATGTCCAATTTGCCGCTACGAACTGCCTAAAGATTGA

Protein sequence

MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSLSAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLSSNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTCPICRYELPKD

Homology

[Close]

BLAST of Moc06g03040 vs. NCBI nr
Match: XP_022135108.1 (E3 ubiquitin-protein ligase AIP2-like [Momordica charantia])

HSP 1 Score: 427.9 bits (1099), Expect = 4.9e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSL 60
           MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSL
Sbjct: 1   MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSL 60

Query: 61  SAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLS 120
           SAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLS
Sbjct: 61  SAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLS 120

Query: 121 SNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLP 180
           SNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLP
Sbjct: 121 SNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLP 180

Query: 181 CIHRYHGGCIRAWLEIKNTCPICRYELPKD 211
           CIHRYHGGCIRAWLEIKNTCPICRYELPKD
Sbjct: 181 CIHRYHGGCIRAWLEIKNTCPICRYELPKD 210

[Close]

BLAST of Moc06g03040 vs. NCBI nr
Match: PWA89192.1 (zinc finger, RING/FYVE/PHD-type [Artemisia annua])

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-20
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 31  SGVNFRSGGHGIQLNLARDILQRQAEQSSLSAWEEFTSSNLAIEDAGFSIQQLDSDFERL 90
           S  +F S  +    N   D+  ++ EQS   A    +  +        S +++D   +  
Sbjct: 59  SSHDFSSNDNNSVANFVMDMFHQRVEQSQSHASSRVSDLHEYNVHEDLSWEEVDGPIDDH 118

Query: 91  IALLE-HERPNSTPPSTIHDADSNILEEFLSSNNYPEVQI----VSNGEWSLTIRTAASR 150
             L E HE+PN+     + D  +  L   LS  NY E ++     ++ + S   R  AS+
Sbjct: 119 EVLGEAHEQPNALEWEVLLDNHNLELNPELSDYNYIEYEMPFGQFADNDSSSMGRPPASK 178

Query: 151 TVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTC 210
           TV+E+LLSVV+ +ED+     VC++C + + +G  AKQLPC HRYHG CI  WL IKNTC
Sbjct: 179 TVVENLLSVVMTDEDIENNYTVCAVCKDEIGVGLIAKQLPCAHRYHGDCILPWLGIKNTC 238

[Close]

BLAST of Moc06g03040 vs. NCBI nr
Match: TQD72162.1 (hypothetical protein C1H46_042302 [Malus baccata])

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 131 SNGEWSLTIRTAASRTVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRY 190
           S  E + T R  A+  V+ESL SVVL +EDV     VC++C + MK GE+AKQLPC HRY
Sbjct: 373 SENENATTGRPPAANAVVESLPSVVLTQEDVEKGNAVCAVCKDEMKSGEQAKQLPCTHRY 432

Query: 191 HGGCIRAWLEIKNTCPICRYELPKD 211
           HG CI  WL I+NTCP+CR+ELP D
Sbjct: 433 HGDCIVPWLRIRNTCPVCRHELPSD 457

[Close]

BLAST of Moc06g03040 vs. NCBI nr
Match: GEX90834.1 (hypothetical protein [Tanacetum cinerariifolium])

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 77/229 (33.62%), Postives = 109/229 (47.60%), Query Frame = 0


Query: 3   HLHSR-----TGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQ 62
           HLH        G   VYP   D   S          +F S  +    N   D+  ++ EQ
Sbjct: 35  HLHDNWSTDIEGFGHVYPWDDDYPSSH---------DFSSNDNNSVANFVMDMFHQRVEQ 94

Query: 63  SSLSA-------WEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDA 122
           S   A        E     +LA E+    I   +   E L +   HE+ ++     + D 
Sbjct: 95  SQSHASARVSNLHEYNVHEDLAWEEVDGPIDDHEIHDEALES--NHEQTDALEWEVLADN 154

Query: 123 DSNILEEFLSSNNYPEVQI----VSNGEWSLTIRTAASRTVIESLLSVVLREEDV----- 182
            +  L   LS  NY E ++     ++ + S   R  AS+TV+E+LLSVV+ +ED+     
Sbjct: 155 HNLELNPELSDYNYIEYEMPFGQFADNDSSSMGRPPASKTVVENLLSVVMTDEDIENNYT 214

Query: 183 VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTCPICRYELPKD 211
           +C++C + + +G  AKQLPC HRYHG CI  WL IKNTCP+CRYEL  D
Sbjct: 215 ICAVCKDEIGVGLIAKQLPCAHRYHGDCILPWLGIKNTCPVCRYELLTD 252

[Close]

BLAST of Moc06g03040 vs. NCBI nr
Match: XP_008374682.1 (uncharacterized protein LOC103437931 [Malus domestica])

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 131 SNGEWSLTIRTAASRTVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRY 190
           S  E + T R  A+  V+ESL SVVL +EDV     VC++C + MK GE+AKQLPC HRY
Sbjct: 373 SENENATTGRPPAANAVVESLPSVVLTQEDVEKGNAVCAVCKDEMKSGEQAKQLPCTHRY 432

Query: 191 HGGCIRAWLEIKNTCPICRYELPKD 211
           HG CI  WL I+NTCP+CR+ELP D
Sbjct: 433 HGDCIVPWLRIRNTCPVCRHELPSD 457

[Close]

BLAST of Moc06g03040 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 37/101 (36.63%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 111 DSNILEEF-LSSNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEW 170
           D  +LEE+ L +     +Q ++  + S      A +  +E+L +V + EE V CS+C++ 
Sbjct: 147 DDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKI-EEVVSCSVCLDD 206

Query: 171 MKIGEEAKQLPCIHRYHGGCIRAWLEIKNTCPICRYELPKD 211
           +++G +AKQ+PC H++H  CI  WLE+ ++CP+CR+ELP +
Sbjct: 207 LEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSE 246

[Close]

BLAST of Moc06g03040 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 143 ASRTVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIK 202
           AS++ IE+L  V + + ++      C++CM+  + G EAKQ+PC H YH  C+  WLE+ 
Sbjct: 199 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 258

Query: 203 NTCPICRYELPKD 211
           N+CP+CR+ELP D
Sbjct: 259 NSCPVCRHELPTD 271

[Close]

BLAST of Moc06g03040 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 143 ASRTVIESLLSVVLRE----EDVVCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKN 202
           AS++ IESL  V + +     +  C++C E  + G E +++PC H +HG CI  WL I+N
Sbjct: 191 ASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRN 250

Query: 203 TCPICRYELPKD 211
           +CP+CR+ELP D
Sbjct: 251 SCPVCRFELPSD 262

[Close]

BLAST of Moc06g03040 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-12
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 140 RTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNT 199
           R  AS+  I+++  V +   +  C IC+E  K  E  K++PC HR+HGGCI  WL    +
Sbjct: 90  RPPASKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGS 149

Query: 200 CPICRYELPKD 211
           CP+CRYE+P D
Sbjct: 150 CPVCRYEMPVD 160

[Close]

BLAST of Moc06g03040 vs. ExPASy Swiss-Prot
Match: Q8RXD3 (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 81  QQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLSSNNYPEVQIVSNGEWSLTIR 140
           Q L S F  ++     E  N    +TI +  +N+++E ++  +     I+ +G       
Sbjct: 147 QNLMSAFASIVG---GESSNGPTENTIGET-ANLMQELINGLDMIIPDILDDG--GPPRA 206

Query: 141 TAASRTVIESLLSVVLREE-------DVVCSICMEWMKIGEEAKQLPCIHRYHGGCIRAW 200
             AS+ V+E L  ++  EE       +  C IC E + IG++ ++LPC H +H  C++ W
Sbjct: 207 PPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPW 266

Query: 201 LEIKNTCPICRYELPKD 211
           L+  N+CPICR+ELP D
Sbjct: 267 LDEHNSCPICRHELPTD 277

[Close]

BLAST of Moc06g03040 vs. ExPASy TrEMBL
Match: A0A6J1C3W1 (E3 ubiquitin-protein ligase AIP2-like OS=Momordica charantia OX=3673 GN=LOC111007170 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.4e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSL 60
           MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSL
Sbjct: 1   MAHLHSRTGDRQVYPRSTDESHSSLFHALISGVNFRSGGHGIQLNLARDILQRQAEQSSL 60

Query: 61  SAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLS 120
           SAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLS
Sbjct: 61  SAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIHDADSNILEEFLS 120

Query: 121 SNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLP 180
           SNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLP
Sbjct: 121 SNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLP 180

Query: 181 CIHRYHGGCIRAWLEIKNTCPICRYELPKD 211
           CIHRYHGGCIRAWLEIKNTCPICRYELPKD
Sbjct: 181 CIHRYHGGCIRAWLEIKNTCPICRYELPKD 210

[Close]

BLAST of Moc06g03040 vs. ExPASy TrEMBL
Match: A0A2U1PU05 (Zinc finger, RING/FYVE/PHD-type OS=Artemisia annua OX=35608 GN=CTI12_AA113470 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.9e-21
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 31  SGVNFRSGGHGIQLNLARDILQRQAEQSSLSAWEEFTSSNLAIEDAGFSIQQLDSDFERL 90
           S  +F S  +    N   D+  ++ EQS   A    +  +        S +++D   +  
Sbjct: 59  SSHDFSSNDNNSVANFVMDMFHQRVEQSQSHASSRVSDLHEYNVHEDLSWEEVDGPIDDH 118

Query: 91  IALLE-HERPNSTPPSTIHDADSNILEEFLSSNNYPEVQI----VSNGEWSLTIRTAASR 150
             L E HE+PN+     + D  +  L   LS  NY E ++     ++ + S   R  AS+
Sbjct: 119 EVLGEAHEQPNALEWEVLLDNHNLELNPELSDYNYIEYEMPFGQFADNDSSSMGRPPASK 178

Query: 151 TVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTC 210
           TV+E+LLSVV+ +ED+     VC++C + + +G  AKQLPC HRYHG CI  WL IKNTC
Sbjct: 179 TVVENLLSVVMTDEDIENNYTVCAVCKDEIGVGLIAKQLPCAHRYHGDCILPWLGIKNTC 238

[Close]

BLAST of Moc06g03040 vs. ExPASy TrEMBL
Match: A0A498JSG0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_008986 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 131 SNGEWSLTIRTAASRTVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRY 190
           S  E + T R  A+  V+ESL SVVL +EDV     VC++C + MK GE+AKQLPC HRY
Sbjct: 373 SENENATTGRPPAANAVVESLPSVVLTQEDVEKGNAVCAVCKDEMKSGEQAKQLPCTHRY 432

Query: 191 HGGCIRAWLEIKNTCPICRYELPKD 211
           HG CI  WL I+NTCP+CR+ELP D
Sbjct: 433 HGDCIVPWLRIRNTCPVCRHELPSD 457

[Close]

BLAST of Moc06g03040 vs. ExPASy TrEMBL
Match: A0A540KDX4 (RING-type domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_042302 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 131 SNGEWSLTIRTAASRTVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRY 190
           S  E + T R  A+  V+ESL SVVL +EDV     VC++C + MK GE+AKQLPC HRY
Sbjct: 373 SENENATTGRPPAANAVVESLPSVVLTQEDVEKGNAVCAVCKDEMKSGEQAKQLPCTHRY 432

Query: 191 HGGCIRAWLEIKNTCPICRYELPKD 211
           HG CI  WL I+NTCP+CR+ELP D
Sbjct: 433 HGDCIVPWLRIRNTCPVCRHELPSD 457

[Close]

BLAST of Moc06g03040 vs. ExPASy TrEMBL
Match: B9RLH2 (Zinc finger protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1466950 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-18
Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 95  EHERPNSTPPSTIHDADSNILEEFLSSNNYPEVQIVSNGEWSLTIRTAASRTVIESLLSV 154
           +H+  N+ P    HD      E  +    + E       E SL +R  A+++V+E L SV
Sbjct: 345 DHDDRNAEPYFGDHDDYIYTAEYEMLFGQFAE------NENSLIVRPPAAKSVVEKLPSV 404

Query: 155 VLREEDV-----VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTCPICRYELPK 211
           VL +EDV     +C++C + + +GE+AKQLPC HRYHG CI  WL I+NTCP+CRYELP 
Sbjct: 405 VLTKEDVESNNALCAVCKDEINVGEKAKQLPCTHRYHGDCILPWLGIRNTCPVCRYELPT 459

[Close]

BLAST of Moc06g03040 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16
Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 49  DILQRQAEQSSLSAWEEFTSSNLAIEDAGFSIQQLDSDFERLIALLEHERPNSTPPSTIH 108
           D+   +   SS   WE   +S        F++   +S+ E  I  ++HE  +        
Sbjct: 270 DLAISERRGSSNLGWEVLLNS----RSLEFNLDDAESNLELYIGDIDHEEED-------- 329

Query: 109 DADSNILEEFLSSNNYPEVQIVSNGEWSLTI-RTAASRTVIESLLSVVLREEDVV----- 168
                  E++L +  Y   +++   E S  I +  AS++ I++L    L  EDV+     
Sbjct: 330 ------YEDYLHTTEY---EMLFEAEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDD 389

Query: 169 ---CSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTCPICRYELPKD 211
              C++C E M +G+E  +LPC H+YH  CI  WL I+NTCP+CR+ELP D
Sbjct: 390 AVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of Moc06g03040 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-16
Identity = 34/69 (49.28%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 143 ASRTVIESLLSVVLREEDV----VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKN 202
           AS++ IE++ +V++ +ED+    VC+IC E  ++GEE K+L C+H YH  CI +WL I N
Sbjct: 114 ASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHN 173

Query: 203 TCPICRYEL 208
           TCPICR+E+
Sbjct: 174 TCPICRFEV 182

[Close]

BLAST of Moc06g03040 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 144 SRTVIESLLSVVLREED-----VVCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKN 203
           S++ + +L  V+L  E+     +VC++C + M IG +A QLPC H+YH  CI  WL+++N
Sbjct: 285 SKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRN 344

Query: 204 TCPICRYELPKD 211
           TCP+CRYELP D
Sbjct: 345 TCPVCRYELPTD 356

[Close]

BLAST of Moc06g03040 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-15
Identity = 30/68 (44.12%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 143 ASRTVIESLLSVVLREEDVVCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIKNTCPI 202
           A +  +E+L +V + EE + CS+C++  +IG EAK +PC H++H  C+  WLE+ ++CP+
Sbjct: 204 AKKEAVEALATVKI-EETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPV 263

Query: 203 CRYELPKD 211
           CRY+LP D
Sbjct: 264 CRYQLPAD 270

[Close]

BLAST of Moc06g03040 vs. TAIR 10
Match: AT3G02340.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-15
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 143 ASRTVIESLLSVVLREEDV-----VCSICMEWMKIGEEAKQLPCIHRYHGGCIRAWLEIK 202
           A+++VI+ L  V L  E++     VC++C + M + E+ ++LPC H YHG CI  WL I+
Sbjct: 310 AAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIR 369

Query: 203 NTCPICRYELPKD 211
           NTCP+CRYELP D
Sbjct: 370 NTCPVCRYELPTD 382

The following BLAST results are available for this feature:

BLAST of Moc06g03040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135108.1	4.9e-116	100.00	E3 ubiquitin-protein ligase AIP2-like [Momordica charantia]	[more]
PWA89192.1	1.0e-20	36.32	zinc finger, RING/FYVE/PHD-type [Artemisia annua]	[more]
TQD72162.1	1.2e-18	57.65	hypothetical protein C1H46_042302 [Malus baccata]	[more]
GEX90834.1	1.2e-18	33.62	hypothetical protein [Tanacetum cinerariifolium]	[more]
XP_008374682.1	1.2e-18	57.65	uncharacterized protein LOC103437931 [Malus domestica]	[more]

BLAST of Moc06g03040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVN2	1.1e-14	36.63	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
P0CH30	1.4e-12	43.84	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9SNB6	1.8e-12	43.06	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q9LQX2	2.4e-12	43.66	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8RXD3	4.0e-12	31.39	E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV...	[more]

BLAST of Moc06g03040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3W1	2.4e-116	100.00	E3 ubiquitin-protein ligase AIP2-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A2U1PU05	4.9e-21	36.32	Zinc finger, RING/FYVE/PHD-type OS=Artemisia annua OX=35608 GN=CTI12_AA113470 PE...	[more]
A0A498JSG0	6.0e-19	57.65	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_008986 PE=4 SV=1	[more]
A0A540KDX4	6.0e-19	57.65	RING-type domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_042302 P...	[more]
B9RLH2	1.0e-18	43.80	Zinc finger protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1466950 PE=4 S...	[more]

BLAST of Moc06g03040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60820.1	1.6e-16	30.99	RING/U-box superfamily protein	[more]
AT1G68180.1	4.7e-16	49.28	RING/U-box superfamily protein	[more]
AT5G08139.1	1.4e-15	47.22	RING/U-box superfamily protein	[more]
AT1G55530.1	4.0e-15	44.12	RING/U-box superfamily protein	[more]
AT3G02340.1	4.0e-15	47.95	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 163..203 e-value: 3.7E-7 score: 39.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 163..204 e-value: 6.0E-11 score: 42.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 163..204 score: 11.722122
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 154..210 e-value: 2.1E-18 score: 67.2
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 70..208
None	No IPR available	PANTHER	PTHR15710:SF108	E3 UBIQUITIN-PROTEIN LIGASE CIP8-LIKE ISOFORM X1	coord: 70..208
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 155..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g03040.1	Moc06g03040.1	mRNA