Moc06g01620 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g01620
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	calmodulin-binding protein 60 A isoform X1
Location	chr6: 1176136 .. 1176531 (-)
RNA-Seq Expression	Moc06g01620
Synteny	Moc06g01620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCATCGGGAGTGCTGGCGGTTTGGATGATCATGCTTTGCAGGGTTTCGATACTATGGTTGTAAGATATGACCAGATTCCAAGTTCCCCAAATTTTGCTCACTCTTCTCTGATCTGCGATTCCGAACCACTAAATTCATCTTTCTATGATGTGGATCATCTCCAAGTTTTAGAGTCTGATGTGCAATGTAGCTCGATTTTAGAAACACAAGCTACACTTCAAGGTGGCCCCTCATCGTGGTCGCGTGCTCAAATTAGATGGACTCAGATATATGGTGTGCTAAGATGGTTCATTTTGATGAGATCTGTTATTAGAAGAAATAAACGCGTATTCGAGAGATTCAACAGTACCGTACAGGGTCGGGGAAAGGAAAAATTGGACTATGGTTGA

mRNA sequence

ATGGGTTCCATCGGGAGTGCTGGCGGTTTGGATGATCATGCTTTGCAGGGTTTCGATACTATGGTTGTAAGATATGACCAGATTCCAAGTTCCCCAAATTTTGCTCACTCTTCTCTGATCTGCGATTCCGAACCACTAAATTCATCTTTCTATGATGTGGATCATCTCCAAGTTTTAGAGTCTGATGTGCAATGTAGCTCGATTTTAGAAACACAAGCTACACTTCAAGGTGGCCCCTCATCGTGGTCGCGTGCTCAAATTAGATGGACTCAGATATATGGTGTGCTAAGATGGTTCATTTTGATGAGATCTGTTATTAGAAGAAATAAACGCGTATTCGAGAGATTCAACAGTACCGTACAGGGTCGGGGAAAGGAAAAATTGGACTATGGTTGA

Coding sequence (CDS)

ATGGGTTCCATCGGGAGTGCTGGCGGTTTGGATGATCATGCTTTGCAGGGTTTCGATACTATGGTTGTAAGATATGACCAGATTCCAAGTTCCCCAAATTTTGCTCACTCTTCTCTGATCTGCGATTCCGAACCACTAAATTCATCTTTCTATGATGTGGATCATCTCCAAGTTTTAGAGTCTGATGTGCAATGTAGCTCGATTTTAGAAACACAAGCTACACTTCAAGGTGGCCCCTCATCGTGGTCGCGTGCTCAAATTAGATGGACTCAGATATATGGTGTGCTAAGATGGTTCATTTTGATGAGATCTGTTATTAGAAGAAATAAACGCGTATTCGAGAGATTCAACAGTACCGTACAGGGTCGGGGAAAGGAAAAATTGGACTATGGTTGA

Protein sequence

MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLESDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTVQGRGKEKLDYG

Homology

[Close]

BLAST of Moc06g01620 vs. NCBI nr
Match: XP_022134821.1 (calmodulin-binding protein 60 A isoform X2 [Momordica charantia])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE
Sbjct: 409 MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 468

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV
Sbjct: 469 SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 528

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLDYG
Sbjct: 529 QGRGKEKLDYG 539

[Close]

BLAST of Moc06g01620 vs. NCBI nr
Match: XP_022134820.1 (calmodulin-binding protein 60 A isoform X1 [Momordica charantia])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE
Sbjct: 464 MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 523

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV
Sbjct: 524 SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 583

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLDYG
Sbjct: 584 QGRGKEKLDYG 594

[Close]

BLAST of Moc06g01620 vs. NCBI nr
Match: XP_023515899.1 (calmodulin-binding protein 60 A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 5.5e-49
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIG++ GLDDHALQGFD+MVVRYDQ+PSSPNFA+SSLICDSEPLNSSF+DVDHLQVLE
Sbjct: 463 MGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLE 522

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SD QCSSI E+++TLQGG SS   AQ+RWT++YGVL+W+ L+R VIRRNK V ER    V
Sbjct: 523 SDFQCSSIFESRSTLQGGSSSCG-AQMRWTKVYGVLKWYFLLRFVIRRNKSVSERNKGAV 582

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLD+G
Sbjct: 583 QGRGKEKLDFG 592

[Close]

BLAST of Moc06g01620 vs. NCBI nr
Match: XP_022921704.1 (calmodulin-binding protein 60 A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 204.5 bits (519), Expect = 5.5e-49
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIG++ GLDDHALQGFD+MVVRYDQ+PSSPNFA+SSLICDSEPLNSSF+DVDHLQVLE
Sbjct: 463 MGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLE 522

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SD QCSSI E+++TLQGG SS   AQ+RWT++YGVL+W+ L+R VIRRNK V ER    V
Sbjct: 523 SDFQCSSIFESRSTLQGGSSSCG-AQMRWTKVYGVLKWYFLLRFVIRRNKSVSERNKGAV 582

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLD+G
Sbjct: 583 QGRGKEKLDFG 592

[Close]

BLAST of Moc06g01620 vs. NCBI nr
Match: XP_022988355.1 (calmodulin-binding protein 60 A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 99/131 (75.57%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIG++ GLDDHALQGFD+MVVRYDQ+PSSPNFA+SSLICDSEPLNSSF+DVDHLQVLE
Sbjct: 463 MGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLE 522

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SD QCSSI E+++TLQGG SS   AQ RWT++YGVL+W+ L+R VIRRNK V ER+   V
Sbjct: 523 SDFQCSSIFESRSTLQGGSSSCG-AQRRWTKVYGVLKWYFLLRFVIRRNKSVSERYKGAV 582

Query: 121 QGRGKEKLDYG 132
           QG GKEK DYG
Sbjct: 583 QGHGKEKFDYG 592

[Close]

BLAST of Moc06g01620 vs. ExPASy TrEMBL
Match: A0A6J1BZE6 (calmodulin-binding protein 60 A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007001 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.7e-68
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE
Sbjct: 464 MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 523

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV
Sbjct: 524 SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 583

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLDYG
Sbjct: 584 QGRGKEKLDYG 594

[Close]

BLAST of Moc06g01620 vs. ExPASy TrEMBL
Match: A0A6J1BYV1 (calmodulin-binding protein 60 A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007001 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.7e-68
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE
Sbjct: 409 MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 468

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV
Sbjct: 469 SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 528

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLDYG
Sbjct: 529 QGRGKEKLDYG 539

[Close]

BLAST of Moc06g01620 vs. ExPASy TrEMBL
Match: A0A6J1E199 (calmodulin-binding protein 60 A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429873 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIG++ GLDDHALQGFD+MVVRYDQ+PSSPNFA+SSLICDSEPLNSSF+DVDHLQVLE
Sbjct: 463 MGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLE 522

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SD QCSSI E+++TLQGG SS   AQ+RWT++YGVL+W+ L+R VIRRNK V ER    V
Sbjct: 523 SDFQCSSIFESRSTLQGGSSSCG-AQMRWTKVYGVLKWYFLLRFVIRRNKSVSERNKGAV 582

Query: 121 QGRGKEKLDYG 132
           QGRGKEKLD+G
Sbjct: 583 QGRGKEKLDFG 592

[Close]

BLAST of Moc06g01620 vs. ExPASy TrEMBL
Match: A0A6J1JJB8 (calmodulin-binding protein 60 A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485622 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.9e-49
Identity = 99/131 (75.57%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIG++ GLDDHALQGFD+MVVRYDQ+PSSPNFA+SSLICDSEPLNSSF+DVDHLQVLE
Sbjct: 463 MGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLE 522

Query: 61  SDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTV 120
           SD QCSSI E+++TLQGG SS   AQ RWT++YGVL+W+ L+R VIRRNK V ER+   V
Sbjct: 523 SDFQCSSIFESRSTLQGGSSSCG-AQRRWTKVYGVLKWYFLLRFVIRRNKSVSERYKGAV 582

Query: 121 QGRGKEKLDYG 132
           QG GKEK DYG
Sbjct: 583 QGHGKEKFDYG 592

[Close]

BLAST of Moc06g01620 vs. ExPASy TrEMBL
Match: A0A0A0LP80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005690 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.4e-42
Identity = 97/135 (71.85%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLE 60
           MGSIG+  GLDDHALQ F +MVVRYD +PSSPNFA+SSLICDSEPL+SSF+DVDH+QVLE
Sbjct: 471 MGSIGNPSGLDDHALQSFGSMVVRYDPMPSSPNFANSSLICDSEPLHSSFFDVDHMQVLE 530

Query: 61  SDVQCSSILE---TQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVI-RRNKRVFERF 120
           SDVQCSSILE   T  TLQGG SS   AQ+RW ++YGVL+WF L+R VI RRNK  F+R+
Sbjct: 531 SDVQCSSILESRVTTTTLQGGSSS-CVAQMRWAKVYGVLKWFFLLRLVIRRRNKLGFKRY 590

Query: 121 NSTVQGRGKEKLDYG 132
              VQ RGKEKLDYG
Sbjct: 591 KG-VQSRGKEKLDYG 603

The following BLAST results are available for this feature:

BLAST of Moc06g01620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134821.1	1.2e-67	100.00	calmodulin-binding protein 60 A isoform X2 [Momordica charantia]	[more]
XP_022134820.1	1.2e-67	100.00	calmodulin-binding protein 60 A isoform X1 [Momordica charantia]	[more]
XP_023515899.1	5.5e-49	76.34	calmodulin-binding protein 60 A-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921704.1	5.5e-49	76.34	calmodulin-binding protein 60 A-like isoform X1 [Cucurbita moschata]	[more]
XP_022988355.1	1.2e-48	75.57	calmodulin-binding protein 60 A-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Moc06g01620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g01620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZE6	5.7e-68	100.00	calmodulin-binding protein 60 A isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1BYV1	5.7e-68	100.00	calmodulin-binding protein 60 A isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1E199	2.7e-49	76.34	calmodulin-binding protein 60 A-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JJB8	5.9e-49	75.57	calmodulin-binding protein 60 A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LP80	2.4e-42	71.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005690 PE=3 SV=1	[more]

BLAST of Moc06g01620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g01620.1	Moc06g01620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005516	calmodulin binding