Homology
BLAST of Moc06g00940 vs. NCBI nr
Match:
XP_022134798.1 (28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia])
HSP 1 Score: 648.3 bits (1671), Expect = 3.7e-182
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK 60
MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK
Sbjct: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK 60
Query: 61 KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW 120
KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW
Sbjct: 61 KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW 120
Query: 121 EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGK 180
EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGK
Sbjct: 121 EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGK 180
Query: 181 AGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGAR 240
AGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGAR
Sbjct: 181 AGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGAR 240
Query: 241 PERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTM 300
PERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTM
Sbjct: 241 PERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTM 300
Query: 301 ADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
ADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF
Sbjct: 301 ADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336
BLAST of Moc06g00940 vs. NCBI nr
Match:
XP_038878997.1 (28 kDa ribonucleoprotein, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 529.3 bits (1362), Expect = 2.5e-146
Identity = 289/339 (85.25%), Postives = 300/339 (88.50%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK 60
MASTSATSILKPLSK DSC LSLPS+FT RPPH+FLSFPSK I F+L SSSH+S FS SK
Sbjct: 1 MASTSATSILKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFNL-SSSHTSLFSSSK 60
Query: 61 KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW 120
KK H S VAQTSDWAQEDDTITIDPKLG DE E+GPHWENQELSETESRISDW
Sbjct: 61 KKTHLPS----VAQTSDWAQEDDTITIDPKLGDDEAA--EEGPHWENQELSETESRISDW 120
Query: 121 EGEAE---DGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMI 180
EGEAE DGGSEAEG +EEEG YEEPNEDAKLFVGNLPYDVDSQKLAM+
Sbjct: 121 EGEAEGEDDGGSEAEG-----------DEEEGPYEEPNEDAKLFVGNLPYDVDSQKLAML 180
Query: 181 FGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPR 240
F KAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPR
Sbjct: 181 FEKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
Query: 241 GARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGF 300
G+RPER PRTFQ +FRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRD+GRSRGFGF
Sbjct: 241 GSRPERQPRTFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDSGRSRGFGF 300
Query: 301 VTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
VTMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 321
BLAST of Moc06g00940 vs. NCBI nr
Match:
TYJ98491.1 (28 kDa ribonucleoprotein [Cucumis melo var. makuwa])
HSP 1 Score: 526.9 bits (1356), Expect = 1.2e-145
Identity = 285/338 (84.32%), Postives = 301/338 (89.05%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60
MASTSATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS F S
Sbjct: 1 MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
Query: 61 KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120
KKKPH S VAQTSDWAQEDDT+TIDPKL DE+ E+E GPHWEN+ELSETESRISD
Sbjct: 61 KKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISD 120
Query: 121 WEGEAEDGGSEAE-GEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIF 180
WEGE EDGGSEAE G D E EEEE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+F
Sbjct: 121 WEGEGEDGGSEAEVGGDEE----EEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180
Query: 181 GKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRG 240
KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPRG
Sbjct: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240
Query: 241 ARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFV 300
R ER PR FQ +FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGFV
Sbjct: 241 TRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
Query: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
TMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 330
BLAST of Moc06g00940 vs. NCBI nr
Match:
KAA0057807.1 (Ribonucleoprotein [Cucumis melo var. makuwa])
HSP 1 Score: 522.3 bits (1344), Expect = 3.1e-144
Identity = 283/339 (83.48%), Postives = 299/339 (88.20%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60
MASTSATS+ K LSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS F S
Sbjct: 1 MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
Query: 61 KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120
KKKPH S VAQTSDWAQEDDT+TIDPKL DE+ E+E GPHWEN+ELSETESRISD
Sbjct: 61 KKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISD 120
Query: 121 W--EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMI 180
W EGE EDGGSEAE GG EEEE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+
Sbjct: 121 WEGEGEGEDGGSEAE----VGGDEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAML 180
Query: 181 FGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPR 240
F KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPR
Sbjct: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
Query: 241 GARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGF 300
G R ER PR FQ +FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGF
Sbjct: 241 GTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
Query: 301 VTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
VTMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
BLAST of Moc06g00940 vs. NCBI nr
Match:
XP_004138078.1 (28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8652388.1 hypothetical protein Csa_013384 [Cucumis sativus])
HSP 1 Score: 520.0 bits (1338), Expect = 1.5e-143
Identity = 281/338 (83.14%), Postives = 300/338 (88.76%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60
MAS+SATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSS+SS FS S
Sbjct: 1 MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 60
Query: 61 KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120
KKKPH S VAQTSDWAQEDDTITIDPKL DE +E GPHWEN+ELSETESRISD
Sbjct: 61 KKKPHLPS----VAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISD 120
Query: 121 WEGEAEDGGSEAE-GEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIF 180
WEGE EDGGSEAE G D E E+EE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+F
Sbjct: 121 WEGEGEDGGSEAEVGGDEE----EDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180
Query: 181 GKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRG 240
KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRY+L GRLLTVNKAAPRG
Sbjct: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRG 240
Query: 241 ARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFV 300
+R ER PR FQ +FRIYVGNLPWDVDN RLEQ+FSEHGKVV+ARVLYDRD+GRSRGFGFV
Sbjct: 241 SRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFV 300
Query: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 330
BLAST of Moc06g00940 vs. ExPASy Swiss-Prot
Match:
Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)
HSP 1 Score: 327.0 bits (837), Expect = 2.5e-88
Identity = 200/340 (58.82%), Postives = 244/340 (71.76%), Query Frame = 0
Query: 1 MASTSATSILKPLSKAD---SCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFS 60
MAS+ TS LKPL+ AD S + S PS+ + S L+ ++ S S
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60
Query: 61 LS-KKKPH--PSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETE 120
LS K K H S VSFVAQTSDWA+E G EE E E+Q++SE +
Sbjct: 61 LSLKTKTHLKKSPFVSFVAQTSDWAEEGGE-------GSVAVEETENS--LESQDVSEGD 120
Query: 121 SRISDWEGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKL 180
+ EG+A + G +EG++ EG + E E + EP+E+AKLFVGNL YDV+SQ L
Sbjct: 121 ----ESEGDASE-GDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQAL 180
Query: 181 AMIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKA 240
AM+F +AGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAE AV+ FNRY+L GRLLTVNKA
Sbjct: 181 AMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKA 240
Query: 241 APRGARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRG 300
APRG+RPER PR ++ +FR+YVGNLPWDVDN RLEQ+FSEHGKVVEARV+YDR+TGRSRG
Sbjct: 241 APRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRG 300
Query: 301 FGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRR 335
FGFVTM+D +N+AI+ALDGQ+L+GRAIRVNVAEERP R
Sbjct: 301 FGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
BLAST of Moc06g00940 vs. ExPASy Swiss-Prot
Match:
P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 1.8e-83
Identity = 190/340 (55.88%), Postives = 231/340 (67.94%), Query Frame = 0
Query: 3 STSATSILKPLSKA-DSCLLSLPSVFTCRPPHSFLSFP------SKLIRFHLSSSSHSSP 62
S + I+KP S A +SCL+SLP +F ++P + HLS + SP
Sbjct: 2 SCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCT--YSP 61
Query: 63 FSLSKKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETES 122
LS KK S +E++T+ +D G E+ +L E
Sbjct: 62 CILSPKKK---------TSVSALQEEENTLILD-------------GQGQESGDLFNFEP 121
Query: 123 RISDWEGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLA 182
+ E E+G EA G+ GE +E +EEEE ++EP EDAKLFVGNLPYDVDS+ LA
Sbjct: 122 SGEETE---EEGFVEAVGDAGESDEVEADEEEE-EFQEPPEDAKLFVGNLPYDVDSEGLA 181
Query: 183 MIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAA 242
+F +AG VEIAEVIYNR+TDQSRGFGFVTMSTVEEAEKAV+ +NRY++ GRLLTVNKAA
Sbjct: 182 RLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAA 241
Query: 243 PRGARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGF 302
RG RPER PRTF+ S+RIYVGN+PW +D+ARLEQ+FSEHGKVV ARV+YDR+TGRSRGF
Sbjct: 242 RRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGF 301
Query: 303 GFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRN 336
GFVTMA E M+DAIA LDGQSLDGR IRVNVAE+R RRN
Sbjct: 302 GFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRRN 313
BLAST of Moc06g00940 vs. ExPASy Swiss-Prot
Match:
P19682 (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 5.5e-80
Identity = 172/319 (53.92%), Postives = 217/319 (68.03%), Query Frame = 0
Query: 17 DSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSKKKPHPSSLVSFVAQTS 76
+ CL+SLP FT S F S ++ SSS + SL+K+ + VS +
Sbjct: 4 NGCLISLPPFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSLNKRTTQFPTFVSVL---- 63
Query: 77 DWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDWEGEAEDGGSEAEGEDG 136
+++D+T+ +D D+E+ G + G
Sbjct: 64 --SEDDNTLVLD-----DQEQ------------------------------GGDFPSFVG 123
Query: 137 EGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGKAGTVEIAEVIYNRETD 196
E G EE Y+EP+EDAKLFVGNLPYD+DS+ LA +F +AG VEIAEVIYNRETD
Sbjct: 124 EAGETEE-------YQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETD 183
Query: 197 QSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGARPERTPRTFQSSFRIYV 256
+SRGFGFVTMSTVEEA+KAV+ +++Y+L GRLLTVNKAAPRG+RPER PRTFQ ++RIYV
Sbjct: 184 RSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYV 243
Query: 257 GNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTMADETGMNDAIAALDGQ 316
GN+PWD+D+ARLEQVFSEHGKVV ARV++DR++GRSRGFGFVTM+ E M++AIA LDGQ
Sbjct: 244 GNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQ 274
Query: 317 SLDGRAIRVNVAEERPRRN 336
+LDGR IRVN AEERPRRN
Sbjct: 304 TLDGRTIRVNAAEERPRRN 274
BLAST of Moc06g00940 vs. ExPASy Swiss-Prot
Match:
Q9FGS0 (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 1.0e-78
Identity = 177/332 (53.31%), Postives = 220/332 (66.27%), Query Frame = 0
Query: 4 TSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSL-SKKK 63
T + +L + + S L +PS+F + S S F LSS + SL SK
Sbjct: 7 TPSLKLLAMTNSSSSTLFCIPSIF------NISSSESHRFNFSLSSRPVNLTLSLKSKTL 66
Query: 64 PHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDWEG 123
+ S +V+FV+QTS+WA+E++ D +GG DE
Sbjct: 67 RNSSPVVTFVSQTSNWAEEEE--GEDGSIGGTSVTVDE---------------------- 126
Query: 124 EAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGKAG 183
E EDG G + EP E+AKLFVGNLPYDVDSQ LAM+F +AG
Sbjct: 127 -------SFESEDGVG------------FPEPPEEAKLFVGNLPYDVDSQALAMLFEQAG 186
Query: 184 TVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGARPE 243
TVEI+EVIYNR+TDQSRGFGFVTMSTVEEAEKAV+ FN +E+ GR LTVN+AAPRG+RPE
Sbjct: 187 TVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE 246
Query: 244 RTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTMAD 303
R PR + ++FRIYVGNLPWDVD+ RLE++FSEHGKVV+ARV+ DR+TGRSRGFGFV M++
Sbjct: 247 RQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSN 289
Query: 304 ETGMNDAIAALDGQSLDGRAIRVNVAEERPRR 335
E +N AIAALDGQ+L+GRAI+VNVAEER RR
Sbjct: 307 ENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
BLAST of Moc06g00940 vs. ExPASy Swiss-Prot
Match:
P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 4.8e-76
Identity = 167/266 (62.78%), Postives = 192/266 (72.18%), Query Frame = 0
Query: 72 VAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDWEGEAEDGGSEA 131
VAQTS+W QE T + E E D +G A GSE
Sbjct: 2 VAQTSEWEQEGSTNAV------LEGESDPEG---------------------AVSWGSET 61
Query: 132 EGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGKAGTVEIAEVIY 191
+ D EGG+ E + EP E+AKLFVGNLPYDVDS+KLA IF AG VEIAEVIY
Sbjct: 62 QVSD-EGGV-----EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIY 121
Query: 192 NRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGARPERTPR-TFQS 251
NRETD+SRGFGFVTMSTVEEAEKAV+ N Y+++GR LTVNKAAPRG+ PER PR F+
Sbjct: 122 NRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEP 181
Query: 252 SFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTMADETGMNDAI 311
S R+YVGNLPWDVD +RLEQ+FSEHGKVV ARV+ DR+TGRSRGFGFVTM+ E+ +NDAI
Sbjct: 182 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 233
Query: 312 AALDGQSLDGRAIRVNVAEERPRRNF 337
AALDGQ+LDGRA+RVNVAEERPRR F
Sbjct: 242 AALDGQTLDGRAVRVNVAEERPRRAF 233
BLAST of Moc06g00940 vs. ExPASy TrEMBL
Match:
A0A6J1C316 (28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111006981 PE=4 SV=1)
HSP 1 Score: 648.3 bits (1671), Expect = 1.8e-182
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK 60
MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK
Sbjct: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSLSK 60
Query: 61 KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW 120
KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW
Sbjct: 61 KKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDW 120
Query: 121 EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGK 180
EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGK
Sbjct: 121 EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGK 180
Query: 181 AGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGAR 240
AGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGAR
Sbjct: 181 AGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGAR 240
Query: 241 PERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTM 300
PERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTM
Sbjct: 241 PERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTM 300
Query: 301 ADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
ADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF
Sbjct: 301 ADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336
BLAST of Moc06g00940 vs. ExPASy TrEMBL
Match:
A0A5D3BIH5 (28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00930 PE=4 SV=1)
HSP 1 Score: 526.9 bits (1356), Expect = 6.0e-146
Identity = 285/338 (84.32%), Postives = 301/338 (89.05%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60
MASTSATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS F S
Sbjct: 1 MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
Query: 61 KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120
KKKPH S VAQTSDWAQEDDT+TIDPKL DE+ E+E GPHWEN+ELSETESRISD
Sbjct: 61 KKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISD 120
Query: 121 WEGEAEDGGSEAE-GEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIF 180
WEGE EDGGSEAE G D E EEEE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+F
Sbjct: 121 WEGEGEDGGSEAEVGGDEE----EEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180
Query: 181 GKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRG 240
KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPRG
Sbjct: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240
Query: 241 ARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFV 300
R ER PR FQ +FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGFV
Sbjct: 241 TRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
Query: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
TMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 330
BLAST of Moc06g00940 vs. ExPASy TrEMBL
Match:
A0A5A7USX4 (Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00900 PE=4 SV=1)
HSP 1 Score: 522.3 bits (1344), Expect = 1.5e-144
Identity = 283/339 (83.48%), Postives = 299/339 (88.20%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60
MASTSATS+ K LSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS F S
Sbjct: 1 MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
Query: 61 KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120
KKKPH S VAQTSDWAQEDDT+TIDPKL DE+ E+E GPHWEN+ELSETESRISD
Sbjct: 61 KKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISD 120
Query: 121 W--EGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMI 180
W EGE EDGGSEAE GG EEEE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+
Sbjct: 121 WEGEGEGEDGGSEAE----VGGDEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAML 180
Query: 181 FGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPR 240
F KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPR
Sbjct: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
Query: 241 GARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGF 300
G R ER PR FQ +FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGF
Sbjct: 241 GTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
Query: 301 VTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
VTMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
BLAST of Moc06g00940 vs. ExPASy TrEMBL
Match:
A0A0A0LNS8 (Ribonucleoprotein OS=Cucumis sativus OX=3659 GN=Csa_1G002890 PE=4 SV=1)
HSP 1 Score: 520.0 bits (1338), Expect = 7.3e-144
Identity = 281/338 (83.14%), Postives = 300/338 (88.76%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60
MAS+SATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSS+SS FS S
Sbjct: 74 MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 133
Query: 61 KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120
KKKPH S VAQTSDWAQEDDTITIDPKL DE +E GPHWEN+ELSETESRISD
Sbjct: 134 KKKPHLPS----VAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISD 193
Query: 121 WEGEAEDGGSEAE-GEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIF 180
WEGE EDGGSEAE G D E E+EE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+F
Sbjct: 194 WEGEGEDGGSEAEVGGDEE----EDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 253
Query: 181 GKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRG 240
KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRY+L GRLLTVNKAAPRG
Sbjct: 254 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRG 313
Query: 241 ARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFV 300
+R ER PR FQ +FRIYVGNLPWDVDN RLEQ+FSEHGKVV+ARVLYDRD+GRSRGFGFV
Sbjct: 314 SRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFV 373
Query: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF
Sbjct: 374 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 403
BLAST of Moc06g00940 vs. ExPASy TrEMBL
Match:
A0A6J1E0P7 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111429756 PE=4 SV=1)
HSP 1 Score: 510.0 bits (1312), Expect = 7.6e-141
Identity = 276/341 (80.94%), Postives = 300/341 (87.98%), Query Frame = 0
Query: 1 MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIR--FHLSSSSHSSPFSL 60
MAS+SATSILKPLSKADSCLLSLPS+FTCRPPHSFLSFPSK FHLSSS SS FS
Sbjct: 1 MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
Query: 61 SKKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRIS 120
SKKK H SSLV+ VAQ+S+W QEDDTITIDPKL GD E+ E+GPHWENQELSE ESRIS
Sbjct: 61 SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLSGD--EDGEEGPHWENQELSENESRIS 120
Query: 121 DWEGEAE---DGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLA 180
DWEGE E DGGSE EG GG+LE +EEEG EEPNEDAKL+VGNL YDVDSQKLA
Sbjct: 121 DWEGEGEGEDDGGSEGEG----GGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLA 180
Query: 181 MIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAA 240
M+F KAGTVEIAEVIY+R++D+SRGFGFVTMS+VEEAEKAVDTFNRYE GR L VNKAA
Sbjct: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRPLVVNKAA 240
Query: 241 PRGARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGF 300
RG+RPER PRTFQ +FRIYVGNL W+VD+ARLEQVFSEHGKVV+ARVLYDRD+GRSRGF
Sbjct: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
Query: 301 GFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 337
GFVTMADETGMNDAIAALDGQS+DGRAIRVNVAEE+PRRNF
Sbjct: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335
BLAST of Moc06g00940 vs. TAIR 10
Match:
AT4G24770.1 (31-kDa RNA binding protein )
HSP 1 Score: 327.0 bits (837), Expect = 1.8e-89
Identity = 200/340 (58.82%), Postives = 244/340 (71.76%), Query Frame = 0
Query: 1 MASTSATSILKPLSKAD---SCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFS 60
MAS+ TS LKPL+ AD S + S PS+ + S L+ ++ S S
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60
Query: 61 LS-KKKPH--PSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETE 120
LS K K H S VSFVAQTSDWA+E G EE E E+Q++SE +
Sbjct: 61 LSLKTKTHLKKSPFVSFVAQTSDWAEEGGE-------GSVAVEETENS--LESQDVSEGD 120
Query: 121 SRISDWEGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKL 180
+ EG+A + G +EG++ EG + E E + EP+E+AKLFVGNL YDV+SQ L
Sbjct: 121 ----ESEGDASE-GDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQAL 180
Query: 181 AMIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKA 240
AM+F +AGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAE AV+ FNRY+L GRLLTVNKA
Sbjct: 181 AMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKA 240
Query: 241 APRGARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRG 300
APRG+RPER PR ++ +FR+YVGNLPWDVDN RLEQ+FSEHGKVVEARV+YDR+TGRSRG
Sbjct: 241 APRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRG 300
Query: 301 FGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRR 335
FGFVTM+D +N+AI+ALDGQ+L+GRAIRVNVAEERP R
Sbjct: 301 FGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
BLAST of Moc06g00940 vs. TAIR 10
Match:
AT5G50250.1 (chloroplast RNA-binding protein 31B )
HSP 1 Score: 295.0 bits (754), Expect = 7.4e-80
Identity = 177/332 (53.31%), Postives = 220/332 (66.27%), Query Frame = 0
Query: 4 TSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHLSSSSHSSPFSL-SKKK 63
T + +L + + S L +PS+F + S S F LSS + SL SK
Sbjct: 7 TPSLKLLAMTNSSSSTLFCIPSIF------NISSSESHRFNFSLSSRPVNLTLSLKSKTL 66
Query: 64 PHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISDWEG 123
+ S +V+FV+QTS+WA+E++ D +GG DE
Sbjct: 67 RNSSPVVTFVSQTSNWAEEEE--GEDGSIGGTSVTVDE---------------------- 126
Query: 124 EAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGKAG 183
E EDG G + EP E+AKLFVGNLPYDVDSQ LAM+F +AG
Sbjct: 127 -------SFESEDGVG------------FPEPPEEAKLFVGNLPYDVDSQALAMLFEQAG 186
Query: 184 TVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGARPE 243
TVEI+EVIYNR+TDQSRGFGFVTMSTVEEAEKAV+ FN +E+ GR LTVN+AAPRG+RPE
Sbjct: 187 TVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE 246
Query: 244 RTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTMAD 303
R PR + ++FRIYVGNLPWDVD+ RLE++FSEHGKVV+ARV+ DR+TGRSRGFGFV M++
Sbjct: 247 RQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSN 289
Query: 304 ETGMNDAIAALDGQSLDGRAIRVNVAEERPRR 335
E +N AIAALDGQ+L+GRAI+VNVAEER RR
Sbjct: 307 ENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
BLAST of Moc06g00940 vs. TAIR 10
Match:
AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 191.0 bits (484), Expect = 1.5e-48
Identity = 112/223 (50.22%), Postives = 139/223 (62.33%), Query Frame = 0
Query: 131 AEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGKAGTVEIAEVI 190
+E E E G + +E S+ + D KLFVGNLP++VDS +LA +F AG VE+ EVI
Sbjct: 67 SEFEVEEDGFADVAPPKEQSF---SADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVI 126
Query: 191 YNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGARPERTPRTFQS 250
Y++ T +SRGFGFVTMS+V E E A FN YEL+GR L VN P R + R +S
Sbjct: 127 YDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRS 186
Query: 251 SF-------------------RIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGR 310
SF R+YVGNL W VD+ LE +FSE GKVVEARV+YDRD+GR
Sbjct: 187 SFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGR 246
Query: 311 SRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRR 335
S+GFGFVT + +AI +LDG LDGR IRV+ AE RP R
Sbjct: 247 SKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286
BLAST of Moc06g00940 vs. TAIR 10
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33 )
HSP 1 Score: 164.5 bits (415), Expect = 1.5e-40
Identity = 96/235 (40.85%), Postives = 153/235 (65.11%), Query Frame = 0
Query: 111 SETESRISDWEGEA---EDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPY 170
+ETE+ +D E +A E+ E EG++GE EE EEE+ + + E+ +L+VGNLPY
Sbjct: 70 AETEASSADDEIQASVEEEEEVEEEGDEGE----EEVEEEKQTTQASGEEGRLYVGNLPY 129
Query: 171 DVDSQKLAMIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGR 230
+ S +L+ IFG+AGTV +++Y++ TD+SRGFGFVTM ++EEA++A+ FN ++ GR
Sbjct: 130 TITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGR 189
Query: 231 LLTVN-KAAPRGARPE--RTP-----RTF-QSSFRIYVGNLPWDVDNARLEQVFSEHGKV 290
+ VN PRG E RT R++ S ++Y GNL W++ + L+ F + V
Sbjct: 190 TVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGV 249
Query: 291 VEARVLYDRDTGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPR 334
+ A+V+Y+R+TGRSRGFGF++ + A+A ++G ++GRA+R+N+A ER +
Sbjct: 250 LGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 300
BLAST of Moc06g00940 vs. TAIR 10
Match:
AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 157.5 bits (397), Expect = 1.8e-38
Identity = 89/193 (46.11%), Postives = 120/193 (62.18%), Query Frame = 0
Query: 141 LEEEEEEEGSYEEPNEDA----KLFVGNLPYDVDSQKLAMIFGKAGTVEIAEVIYNRETD 200
LEEEE+++G+ + A KL+ GNLPY+VDS LA I E+ EV+YNR+T
Sbjct: 64 LEEEEKDDGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTG 123
Query: 201 QSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGARPERTPRTFQSSFRIYV 260
QSRGF FVTMS VE+ +D + E GR L VN A +P + P ++ +++V
Sbjct: 124 QSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADK--PKPNKEPLYPETEHKLFV 183
Query: 261 GNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVTMADETGMNDAIAALDGQ 320
GNL W V + L F E G VV ARV++D DTGRSRG+GFV + + M A+ +LDG
Sbjct: 184 GNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGF 243
Query: 321 SLDGRAIRVNVAE 330
L+GRAIRVN+A+
Sbjct: 244 ELEGRAIRVNLAQ 254
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134798.1 | 3.7e-182 | 100.00 | 28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia] | [more] |
XP_038878997.1 | 2.5e-146 | 85.25 | 28 kDa ribonucleoprotein, chloroplastic-like [Benincasa hispida] | [more] |
TYJ98491.1 | 1.2e-145 | 84.32 | 28 kDa ribonucleoprotein [Cucumis melo var. makuwa] | [more] |
KAA0057807.1 | 3.1e-144 | 83.48 | Ribonucleoprotein [Cucumis melo var. makuwa] | [more] |
XP_004138078.1 | 1.5e-143 | 83.14 | 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8652388.1 hypothet... | [more] |
Match Name | E-value | Identity | Description | |
Q04836 | 2.5e-88 | 58.82 | 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A... | [more] |
P19683 | 1.8e-83 | 55.88 | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
P19682 | 5.5e-80 | 53.92 | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
Q9FGS0 | 1.0e-78 | 53.31 | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31... | [more] |
P28644 | 4.8e-76 | 62.78 | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C316 | 1.8e-182 | 100.00 | 28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=L... | [more] |
A0A5D3BIH5 | 6.0e-146 | 84.32 | 28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A5A7USX4 | 1.5e-144 | 83.48 | Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00... | [more] |
A0A0A0LNS8 | 7.3e-144 | 83.14 | Ribonucleoprotein OS=Cucumis sativus OX=3659 GN=Csa_1G002890 PE=4 SV=1 | [more] |
A0A6J1E0P7 | 7.6e-141 | 80.94 | 28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO... | [more] |