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Moc06g00540 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGAAGATCAGAAGGAGTTGCAGCTCCTCCCGACGCCTCACTCGATGGCATCGTCATCCCACATGTCGTCTCGGGCGGGCGAGTCGTCGTTCCGGTTCCGGTCGACGACGATATCGGATCCGCTGTTCGAAGGCGGGGGTGCAGGTGCAGGTGCAGCAGGTGCGTCGCTGGACCTGCAGCTGTCGATCAGCGTGAGGCCAATCCGGGCGGCGTCGGAGCTGATGAAGCCGGAGGCGGCGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATCCGGCTGGCCGCGATGGAGAAGGCGTACGCGGAGAGGGTGAGGGAGCTGACGAAGCGGGAGATAGAATTGGCGCAGACGGAATTCGCGAGGGCGCGGCAGATGTGGGAGAGGGCTCGCGAAGAGGTTGAAAAGGCGGAGCGTATGAAAGAGAGAGCCACGCGCCAAATGGATTCTACGTGCATGGAGATCACCTGCCAATCCTGCCGCCAGAGGTTTCGGCCTTCCTAA ATGGAAGACGAAGATCAGAAGGAGTTGCAGCTCCTCCCGACGCCTCACTCGATGGCATCGTCATCCCACATGTCGTCTCGGGCGGGCGAGTCGTCGTTCCGGTTCCGGTCGACGACGATATCGGATCCGCTGTTCGAAGGCGGGGGTGCAGGTGCAGGTGCAGCAGGTGCGTCGCTGGACCTGCAGCTGTCGATCAGCGTGAGGCCAATCCGGGCGGCGTCGGAGCTGATGAAGCCGGAGGCGGCGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATCCGGCTGGCCGCGATGGAGAAGGCGTACGCGGAGAGGGTGAGGGAGCTGACGAAGCGGGAGATAGAATTGGCGCAGACGGAATTCGCGAGGGCGCGGCAGATGTGGGAGAGGGCTCGCGAAGAGGTTGAAAAGGCGGAGCGTATGAAAGAGAGAGCCACGCGCCAAATGGATTCTACGTGCATGGAGATCACCTGCCAATCCTGCCGCCAGAGGTTTCGGCCTTCCTAA ATGGAAGACGAAGATCAGAAGGAGTTGCAGCTCCTCCCGACGCCTCACTCGATGGCATCGTCATCCCACATGTCGTCTCGGGCGGGCGAGTCGTCGTTCCGGTTCCGGTCGACGACGATATCGGATCCGCTGTTCGAAGGCGGGGGTGCAGGTGCAGGTGCAGCAGGTGCGTCGCTGGACCTGCAGCTGTCGATCAGCGTGAGGCCAATCCGGGCGGCGTCGGAGCTGATGAAGCCGGAGGCGGCGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATCCGGCTGGCCGCGATGGAGAAGGCGTACGCGGAGAGGGTGAGGGAGCTGACGAAGCGGGAGATAGAATTGGCGCAGACGGAATTCGCGAGGGCGCGGCAGATGTGGGAGAGGGCTCGCGAAGAGGTTGAAAAGGCGGAGCGTATGAAAGAGAGAGCCACGCGCCAAATGGATTCTACGTGCATGGAGATCACCTGCCAATCCTGCCGCCAGAGGTTTCGGCCTTCCTAA MEDEDQKELQLLPTPHSMASSSHMSSRAGESSFRFRSTTISDPLFEGGGAGAGAAGASLDLQLSISVRPIRAASELMKPEAAEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS Homology
BLAST of Moc06g00540 vs. NCBI nr
Match: XP_022135320.1 (protein indeterminate-domain 16 [Momordica charantia]) HSP 1 Score: 305.1 bits (780), Expect = 3.8e-79 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Moc06g00540 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida]) HSP 1 Score: 231.5 bits (589), Expect = 5.4e-57 Identity = 142/179 (79.33%), Postives = 148/179 (82.68%), Query Frame = 0
BLAST of Moc06g00540 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 231.1 bits (588), Expect = 7.0e-57 Identity = 143/182 (78.57%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of Moc06g00540 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 229.6 bits (584), Expect = 2.0e-56 Identity = 142/182 (78.02%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of Moc06g00540 vs. NCBI nr
Match: XP_004138047.1 (protein indeterminate-domain 16 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 2.7e-56 Identity = 142/185 (76.76%), Postives = 151/185 (81.62%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06 Identity = 28/63 (44.44%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy TrEMBL
Match: A0A6J1C0T1 (protein indeterminate-domain 16 OS=Momordica charantia OX=3673 GN=LOC111007311 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy TrEMBL
Match: A0A5D3BFD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00530 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.4e-57 Identity = 143/182 (78.57%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy TrEMBL
Match: A0A1S3CN02 (protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.4e-57 Identity = 143/182 (78.57%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy TrEMBL
Match: A0A5A7UWD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00540 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 9.9e-57 Identity = 142/182 (78.02%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of Moc06g00540 vs. ExPASy TrEMBL
Match: A0A0A0LRS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56 Identity = 142/185 (76.76%), Postives = 151/185 (81.62%), Query Frame = 0
BLAST of Moc06g00540 vs. TAIR 10
Match: AT3G48550.1 (BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34 Identity = 90/166 (54.22%), Postives = 112/166 (67.47%), Query Frame = 0
BLAST of Moc06g00540 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Moc06g00540 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Moc06g00540 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Moc06g00540 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 ) HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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