Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGCGGAAACTCGAGGCTTATCCCGGATGGAGAGTCGATTCCTGCCCGGATTCGCCCACTTATGCGCCTTAGATTTTCGGATTTGAGGAGGCGTAAGAACGGAAGCAATCTGGAGACTGGAACGCTCTCGAAGAAAGTGCTTCTCAAAGATCACGAAGACAACTCTACCTCTATGCATGTTATTGATAAAAAAAGCGTATCTTTTTCATCTTATTCTTCACCTAGTGGCAGCACCAAACCTGCACCTGCACCTGCACACATCAACAAACAGGACAACAAGGACGATGAAGATTATTCACCAATTCCCATTCCCCTCTCTAGCAACAATGCAATCAAAGAGGACCTCCATGAAGACCACAACAAGAAATCAGGAGAAGATCACATCGAAGACACTGCTCGGTCCATCATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTCGTTGAAGAAGAAGATGATGACAAAGCAAGCGGTGAGCTCACGAATCACTTTTACGAATATCCATTTTGCAATTATGAGACCAAGCACATATTTTGCAGTTGAAATCAAAGACGATGTCTCGCACAACAACTCCCCAACCCATGACAGAATCGACACCACCACCACCACCACCACTTGTGCAAATTTTGGCCAGGTACGCCTGCCCACCATACCTATACTTCCTCTCAACTTATATAACTCACGTTTCTCACATTCTTGATCTGACAGGCCCAAGACAGCAAGGTGATCATAACGAAAGGAAAAGAAGGATCCAGGAGTTGTACAAAGGCCATTAGTAGTAAGAAAAGACAAGGTGGTGTAAGGAATCTGTTGAATGTCAAATCTTGCTACCATTTACGTTGTTCTGGCAACGACAGATCCACTCAGCTTCTTGCTAGAAAAGCTCAAGCTCAAGCTTATTAA
mRNA sequence
ATGGGGTGCGGAAACTCGAGGCTTATCCCGGATGGAGAGTCGATTCCTGCCCGGATTCGCCCACTTATGCGCCTTAGATTTTCGGATTTGAGGAGGCGTAAGAACGGAAGCAATCTGGAGACTGGAACGCTCTCGAAGAAAGTGCTTCTCAAAGATCACGAAGACAACTCTACCTCTATGCATGTTATTGATAAAAAAAGCGTATCTTTTTCATCTTATTCTTCACCTAGTGGCAGCACCAAACCTGCACCTGCACCTGCACACATCAACAAACAGGACAACAAGGACGATGAAGATTATTCACCAATTCCCATTCCCCTCTCTAGCAACAATGCAATCAAAGAGGACCTCCATGAAGACCACAACAAGAAATCAGGAGAAGATCACATCGAAGACACTGCTCGGTCCATCATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTCGTTGAAGAAGAAGATGATGACAAAGCAAGCGTTGAAATCAAAGACGATGTCTCGCACAACAACTCCCCAACCCATGACAGAATCGACACCACCACCACCACCACCACTTGTGCAAATTTTGGCCAGGCCCAAGACAGCAAGGTGATCATAACGAAAGGAAAAGAAGGATCCAGGAGTTGTACAAAGGCCATTAGTAGTAAGAAAAGACAAGGTGGTGTAAGGAATCTGTTGAATGTCAAATCTTGCTACCATTTACGTTGTTCTGGCAACGACAGATCCACTCAGCTTCTTGCTAGAAAAGCTCAAGCTCAAGCTTATTAA
Coding sequence (CDS)
ATGGGGTGCGGAAACTCGAGGCTTATCCCGGATGGAGAGTCGATTCCTGCCCGGATTCGCCCACTTATGCGCCTTAGATTTTCGGATTTGAGGAGGCGTAAGAACGGAAGCAATCTGGAGACTGGAACGCTCTCGAAGAAAGTGCTTCTCAAAGATCACGAAGACAACTCTACCTCTATGCATGTTATTGATAAAAAAAGCGTATCTTTTTCATCTTATTCTTCACCTAGTGGCAGCACCAAACCTGCACCTGCACCTGCACACATCAACAAACAGGACAACAAGGACGATGAAGATTATTCACCAATTCCCATTCCCCTCTCTAGCAACAATGCAATCAAAGAGGACCTCCATGAAGACCACAACAAGAAATCAGGAGAAGATCACATCGAAGACACTGCTCGGTCCATCATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTCGTTGAAGAAGAAGATGATGACAAAGCAAGCGTTGAAATCAAAGACGATGTCTCGCACAACAACTCCCCAACCCATGACAGAATCGACACCACCACCACCACCACCACTTGTGCAAATTTTGGCCAGGCCCAAGACAGCAAGGTGATCATAACGAAAGGAAAAGAAGGATCCAGGAGTTGTACAAAGGCCATTAGTAGTAAGAAAAGACAAGGTGGTGTAAGGAATCTGTTGAATGTCAAATCTTGCTACCATTTACGTTGTTCTGGCAACGACAGATCCACTCAGCTTCTTGCTAGAAAAGCTCAAGCTCAAGCTTATTAA
Protein sequence
MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSMHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHEDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTTTTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGNDRSTQLLARKAQAQAY
Homology
BLAST of Moc06g00250 vs. NCBI nr
Match:
XP_022135203.1 (uncharacterized protein LOC111007223 isoform X1 [Momordica charantia])
HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-137
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
Query: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED
Sbjct: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
Query: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT 180
HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT
Sbjct: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT 180
Query: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND
Sbjct: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
Query: 241 RSTQLLARKAQAQAY 256
RSTQLLARKAQAQAY
Sbjct: 241 RSTQLLARKAQAQAY 255
BLAST of Moc06g00250 vs. NCBI nr
Match:
XP_022135204.1 (uncharacterized protein LOC111007223 isoform X2 [Momordica charantia])
HSP 1 Score: 487.3 bits (1253), Expect = 8.3e-134
Identity = 251/255 (98.43%), Postives = 251/255 (98.43%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
Query: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED
Sbjct: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
Query: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT 180
HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS DDVSHNNSPTHDRIDTT
Sbjct: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS----DDVSHNNSPTHDRIDTT 180
Query: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND
Sbjct: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
Query: 241 RSTQLLARKAQAQAY 256
RSTQLLARKAQAQAY
Sbjct: 241 RSTQLLARKAQAQAY 251
BLAST of Moc06g00250 vs. NCBI nr
Match:
XP_008464387.1 (PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo])
HSP 1 Score: 174.9 bits (442), Expect = 9.1e-40
Identity = 129/307 (42.02%), Postives = 171/307 (55.70%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLM-RLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTS 60
MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L G LSKKVLLK+ E +
Sbjct: 7 MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66
Query: 61 MHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA------- 120
+D + GSTK + H KD+ + S IP S+N+A
Sbjct: 67 AMFVDNR--------HECGSTKCLASQQHTINNATKDEHN-SASTIPPSNNDANATKNGE 126
Query: 121 ----------------------------IKEDL----------HEDHNKKSGED---HIE 180
+K+D +++NKK GED E
Sbjct: 127 QSNRILEEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNE 186
Query: 181 DTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-----DVSHNNSPTHDRIDTTTTTTTC 240
+ SIICPGSPSFR YFVEE DDK VE+KD DVSH SP+HD +++TT+
Sbjct: 187 ENRGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTS---- 246
Query: 241 ANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQL 253
A G+ Q++KV I KGK+G+ + + IS ++ GV+NLLNVKSCYHL CSGNDR+ L
Sbjct: 247 AKSGEGQENKV-IKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NL 297
BLAST of Moc06g00250 vs. NCBI nr
Match:
KAA0057746.1 (ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa])
HSP 1 Score: 174.9 bits (442), Expect = 9.1e-40
Identity = 129/307 (42.02%), Postives = 171/307 (55.70%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLM-RLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTS 60
MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L G LSKKVLLK+ E +
Sbjct: 1 MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60
Query: 61 MHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA------- 120
+D + GSTK + H KD+ + S IP S+N+A
Sbjct: 61 AMFVDNR--------HECGSTKCLASQQHTINNATKDEHN-SASTIPPSNNDANATKNGE 120
Query: 121 ----------------------------IKEDL----------HEDHNKKSGED---HIE 180
+K+D +++NKK GED E
Sbjct: 121 QSNRILEEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNE 180
Query: 181 DTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-----DVSHNNSPTHDRIDTTTTTTTC 240
+ SIICPGSPSFR YFVEE DDK VE+KD DVSH SP+HD +++TT+
Sbjct: 181 ENRGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTS---- 240
Query: 241 ANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQL 253
A G+ Q++KV I KGK+G+ + + IS ++ GV+NLLNVKSCYHL CSGNDR+ L
Sbjct: 241 AKSGEGQENKV-IKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NL 291
BLAST of Moc06g00250 vs. NCBI nr
Match:
XP_011649820.1 (probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus])
HSP 1 Score: 172.6 bits (436), Expect = 4.5e-39
Identity = 130/310 (41.94%), Postives = 167/310 (53.87%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPL-MRLRFSDLRRRKNGSNLETGTLSKKVLLKDHE-DNST 60
MGCGNS+L P GE +P RIRPL +R + +LR+RKNG++L G LSKKVLLKD E +
Sbjct: 1 MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
Query: 61 SMHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA------ 120
+MHV ++ GSTK + H N + DE S IP S+NNA
Sbjct: 61 AMHVDNRHE---------CGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTG 120
Query: 121 -----------------------------IKEDL----------HEDHNKKSGED---HI 180
+K+D +++NKK GED
Sbjct: 121 EQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDN 180
Query: 181 EDTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-----DVSHNNSPTHDRIDTTTTTTT 240
E+ S ICPGSPSFR+YFVEE DDK VE+KD DVSH SP+ D +++TT+
Sbjct: 181 EENRGSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTS--- 240
Query: 241 CANFGQAQDSKVIITKGKEGSRSCT-KAISSKKR--QGGVRNLLNVKSCYHLRCSGNDRS 253
A + Q++K I K+G + T + SKKR GV+NLLNVKSCYHL CSGNDR+
Sbjct: 241 -AKCDEGQENKAI----KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRA 292
BLAST of Moc06g00250 vs. ExPASy TrEMBL
Match:
A0A6J1C458 (uncharacterized protein LOC111007223 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007223 PE=4 SV=1)
HSP 1 Score: 500.0 bits (1286), Expect = 6.0e-138
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
Query: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED
Sbjct: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
Query: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT 180
HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT
Sbjct: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT 180
Query: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND
Sbjct: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
Query: 241 RSTQLLARKAQAQAY 256
RSTQLLARKAQAQAY
Sbjct: 241 RSTQLLARKAQAQAY 255
BLAST of Moc06g00250 vs. ExPASy TrEMBL
Match:
A0A6J1C0S3 (uncharacterized protein LOC111007223 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007223 PE=4 SV=1)
HSP 1 Score: 487.3 bits (1253), Expect = 4.0e-134
Identity = 251/255 (98.43%), Postives = 251/255 (98.43%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1 MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
Query: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED
Sbjct: 61 HVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHED 120
Query: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTT 180
HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS DDVSHNNSPTHDRIDTT
Sbjct: 121 HNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS----DDVSHNNSPTHDRIDTT 180
Query: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND
Sbjct: 181 TTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGND 240
Query: 241 RSTQLLARKAQAQAY 256
RSTQLLARKAQAQAY
Sbjct: 241 RSTQLLARKAQAQAY 251
BLAST of Moc06g00250 vs. ExPASy TrEMBL
Match:
A0A5D3BHA4 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00270 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 4.4e-40
Identity = 129/307 (42.02%), Postives = 171/307 (55.70%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLM-RLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTS 60
MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L G LSKKVLLK+ E +
Sbjct: 1 MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60
Query: 61 MHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA------- 120
+D + GSTK + H KD+ + S IP S+N+A
Sbjct: 61 AMFVDNR--------HECGSTKCLASQQHTINNATKDEHN-SASTIPPSNNDANATKNGE 120
Query: 121 ----------------------------IKEDL----------HEDHNKKSGED---HIE 180
+K+D +++NKK GED E
Sbjct: 121 QSNRILEEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNE 180
Query: 181 DTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-----DVSHNNSPTHDRIDTTTTTTTC 240
+ SIICPGSPSFR YFVEE DDK VE+KD DVSH SP+HD +++TT+
Sbjct: 181 ENRGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTS---- 240
Query: 241 ANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQL 253
A G+ Q++KV I KGK+G+ + + IS ++ GV+NLLNVKSCYHL CSGNDR+ L
Sbjct: 241 AKSGEGQENKV-IKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NL 291
BLAST of Moc06g00250 vs. ExPASy TrEMBL
Match:
A0A1S3CLT6 (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 4.4e-40
Identity = 129/307 (42.02%), Postives = 171/307 (55.70%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPLM-RLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTS 60
MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L G LSKKVLLK+ E +
Sbjct: 7 MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66
Query: 61 MHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA------- 120
+D + GSTK + H KD+ + S IP S+N+A
Sbjct: 67 AMFVDNR--------HECGSTKCLASQQHTINNATKDEHN-SASTIPPSNNDANATKNGE 126
Query: 121 ----------------------------IKEDL----------HEDHNKKSGED---HIE 180
+K+D +++NKK GED E
Sbjct: 127 QSNRILEEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNE 186
Query: 181 DTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-----DVSHNNSPTHDRIDTTTTTTTC 240
+ SIICPGSPSFR YFVEE DDK VE+KD DVSH SP+HD +++TT+
Sbjct: 187 ENRGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTS---- 246
Query: 241 ANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQL 253
A G+ Q++KV I KGK+G+ + + IS ++ GV+NLLNVKSCYHL CSGNDR+ L
Sbjct: 247 AKSGEGQENKV-IKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NL 297
BLAST of Moc06g00250 vs. ExPASy TrEMBL
Match:
A0A0A0LNT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 2.2e-39
Identity = 130/310 (41.94%), Postives = 167/310 (53.87%), Query Frame = 0
Query: 1 MGCGNSRLIPDGESIPARIRPL-MRLRFSDLRRRKNGSNLETGTLSKKVLLKDHE-DNST 60
MGCGNS+L P GE +P RIRPL +R + +LR+RKNG++L G LSKKVLLKD E +
Sbjct: 1 MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
Query: 61 SMHVIDKKSVSFSSYSSPSGSTKPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA------ 120
+MHV ++ GSTK + H N + DE S IP S+NNA
Sbjct: 61 AMHVDNRHE---------CGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTG 120
Query: 121 -----------------------------IKEDL----------HEDHNKKSGED---HI 180
+K+D +++NKK GED
Sbjct: 121 EQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDN 180
Query: 181 EDTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-----DVSHNNSPTHDRIDTTTTTTT 240
E+ S ICPGSPSFR+YFVEE DDK VE+KD DVSH SP+ D +++TT+
Sbjct: 181 EENRGSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTS--- 240
Query: 241 CANFGQAQDSKVIITKGKEGSRSCT-KAISSKKR--QGGVRNLLNVKSCYHLRCSGNDRS 253
A + Q++K I K+G + T + SKKR GV+NLLNVKSCYHL CSGNDR+
Sbjct: 241 -AKCDEGQENKAI----KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRA 292
BLAST of Moc06g00250 vs. TAIR 10
Match:
AT5G50830.2 (unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink). )
HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07
Identity = 63/213 (29.58%), Postives = 96/213 (45.07%), Query Frame = 0
Query: 1 MGCGNSRL-------IPDG--ESIPARIRPLMRLRFSDLRRRKNGSNLE-TGTLSKKVLL 60
MGCG SRL +G +PA IRPL+R R ++++R + L+ + TLSKK LL
Sbjct: 1 MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLLRRRLEEMKKRSHAGVLKGSQTLSKKELL 60
Query: 61 K--------DHEDNSTSM------------HVIDKKSVSFSSYSSPSGSTKPAPAPAHIN 120
+ D E+N S+ +V +KK V + S K +N
Sbjct: 61 RHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPS-KDDVKEVKEEVVVN 120
Query: 121 KQDNKDDEDYSPIPIPLSSNN--AIKEDLHEDHN--------KKSGED---------HIE 162
KQ+ +D + + N +K+ E+H+ KK G+D I
Sbjct: 121 KQE--EDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEGSIN 180
BLAST of Moc06g00250 vs. TAIR 10
Match:
AT5G50830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink). )
HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 81/302 (26.82%), Postives = 126/302 (41.72%), Query Frame = 0
Query: 1 MGCGNSRL-------IPDG--ESIPARIRPLMRLRFSDLRRRKNGSNLE-TGTLSKKVLL 60
MGCG SRL +G +PA IRPL+R R ++++R + L+ + TLSKK LL
Sbjct: 1 MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLLRRRLEEMKKRSHAGVLKGSQTLSKKELL 60
Query: 61 K--------DHEDNSTSM------------HVIDKKSVSFSSYSSPSGSTKPAPAPAHIN 120
+ D E+N S+ +V +KK V + S K +N
Sbjct: 61 RHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPS-KDDVKEVKEEVVVN 120
Query: 121 KQDNKDDEDYSPIPIPLSSNN--AIKEDLHEDHN--------KKSGED---------HIE 180
KQ+ +D + + N +K+ E+H+ KK G+D I
Sbjct: 121 KQE--EDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEGSIN 180
Query: 181 DTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDVSHNNSPTHDRIDTTTTTTTCANFGQ 240
+ +I PGSPSFRVY V+ DD DD + ++T + TT +
Sbjct: 181 NFDERMIGPGSPSFRVYCVDVPSDD-------DDEEKDVEDARKSMETESVTT------E 240
Query: 241 AQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKS-CY-HLRCSGNDRSTQLLARK 252
++ I+ K K+ R I+ ++ L NV + CY C GN S + +
Sbjct: 241 IKEDGSIVKKEKKERRGKRFGIALPRKY-----LANVTAPCYAGGGCMGNTHSRLVQEKS 281
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022135203.1 | 1.2e-137 | 100.00 | uncharacterized protein LOC111007223 isoform X1 [Momordica charantia] | [more] |
XP_022135204.1 | 8.3e-134 | 98.43 | uncharacterized protein LOC111007223 isoform X2 [Momordica charantia] | [more] |
XP_008464387.1 | 9.1e-40 | 42.02 | PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo] | [more] |
KAA0057746.1 | 9.1e-40 | 42.02 | ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 AB... | [more] |
XP_011649820.1 | 4.5e-39 | 41.94 | probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C458 | 6.0e-138 | 100.00 | uncharacterized protein LOC111007223 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1C0S3 | 4.0e-134 | 98.43 | uncharacterized protein LOC111007223 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A5D3BHA4 | 4.4e-40 | 42.02 | ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3CLT6 | 4.4e-40 | 42.02 | uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=... | [more] |
A0A0A0LNT2 | 2.2e-39 | 41.94 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G50830.2 | 2.2e-07 | 29.58 | unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 1... | [more] |
AT5G50830.1 | 1.2e-05 | 26.82 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |