Moc05g32060 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g32060
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Histone H2B
Location	chr5: 24010555 .. 24010977 (+)
RNA-Seq Expression	Moc05g32060
Synteny	Moc05g32060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCAACGAAGGCCGAAAAGAAGCCCGCGGAGAAGAAGCCGGCGGCCGAGAAGGCCCCTTCCTCGGCGGAGAAGAAGCCGAAGGCCGAGAAGAAGATCACCAAGGAGGGCGGCGATAAGAAGAAGAAGAAGATCAAAAAGAGCACCGAGACTTACAAGATCTACATTTTCAAGGTTTTGAAGCAGGTCCACCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAGCTCGCGCAGGAGGCTTCTAAATTGGCTAGATATAACAAGAAACCGACGATCACCTCCCGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCGAAGCACGCCGTATCTGAAGGAACTAAAGCCGTGACTAAATTTACCAGTTCTTAG

mRNA sequence

ATGGCGCCAACGAAGGCCGAAAAGAAGCCCGCGGAGAAGAAGCCGGCGGCCGAGAAGGCCCCTTCCTCGGCGGAGAAGAAGCCGAAGGCCGAGAAGAAGATCACCAAGGAGGGCGGCGATAAGAAGAAGAAGAAGATCAAAAAGAGCACCGAGACTTACAAGATCTACATTTTCAAGGTTTTGAAGCAGGTCCACCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAGCTCGCGCAGGAGGCTTCTAAATTGGCTAGATATAACAAGAAACCGACGATCACCTCCCGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCGAAGCACGCCGTATCTGAAGGAACTAAAGCCGTGACTAAATTTACCAGTTCTTAG

Coding sequence (CDS)

ATGGCGCCAACGAAGGCCGAAAAGAAGCCCGCGGAGAAGAAGCCGGCGGCCGAGAAGGCCCCTTCCTCGGCGGAGAAGAAGCCGAAGGCCGAGAAGAAGATCACCAAGGAGGGCGGCGATAAGAAGAAGAAGAAGATCAAAAAGAGCACCGAGACTTACAAGATCTACATTTTCAAGGTTTTGAAGCAGGTCCACCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAGCTCGCGCAGGAGGCTTCTAAATTGGCTAGATATAACAAGAAACCGACGATCACCTCCCGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCGAAGCACGCCGTATCTGAAGGAACTAAAGCCGTGACTAAATTTACCAGTTCTTAG

Protein sequence

MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of Moc05g32060 vs. NCBI nr
Match: XP_022145639.1 (probable histone H2B.3 [Momordica charantia])

HSP 1 Score: 250.8 bits (639), Expect = 7.1e-63
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 140

[Close]

BLAST of Moc05g32060 vs. NCBI nr
Match: XP_038903506.1 (probable histone H2B.3 [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 3.3e-60
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKP AEKAPSSAEKKPKAEKKI K+GGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKP-AEKAPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. NCBI nr
Match: XP_008442575.1 (PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like [Cucumis melo var. makuwa] >TYK25065.1 histone H2B-like [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 4.8e-59
Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKP AEK PSSAEKKPKAEKKI K+ GDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKP-AEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. NCBI nr
Match: OMO66199.1 (Histone H2B [Corchorus capsularis])

HSP 1 Score: 237.7 bits (605), Expect = 6.3e-59
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAP KAEKKPAEKKP AEKAP+SAEK+PKAEKKITKEGG+KKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAP-KAEKKPAEKKPVAEKAPASAEKRPKAEKKITKEGGEKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. NCBI nr
Match: XP_021289604.1 (histone H2B-like [Herrania umbratica] >EOY07601.1 Histone superfamily protein [Theobroma cacao])

HSP 1 Score: 237.7 bits (605), Expect = 6.3e-59
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAP KAEKKPAEKKP AEKAP+SAEK+PKAEKKI+KEGGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAP-KAEKKPAEKKPVAEKAPASAEKRPKAEKKISKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 219.2 bits (557), Expect = 3.0e-56
Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEG-GDKKKKKIKKSTETYKIYIFK 60
           M PTKAEKKPAEKKP AEKAP  AEKKPKAEKKI+KEG  DKKKK+ KKS ETYKIYIFK
Sbjct: 1   MPPTKAEKKPAEKKP-AEKAP--AEKKPKAEKKISKEGSSDKKKKRTKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTSS 141
           GELAKHAVSEGTKAVTKFTSS
Sbjct: 121 GELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Moc05g32060 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-54
Identity = 130/150 (86.67%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPA------AEKAPSSAEKKPKAEKKITKEG----GDKKKKKIKKST 60
           MAP KAEKKPAEKKPA      AEKAP  AEKKPKA KK+ KEG    GDKKKK++KKS 
Sbjct: 1   MAP-KAEKKPAEKKPAEEKKAVAEKAP--AEKKPKAGKKLPKEGGAAAGDKKKKRVKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of Moc05g32060 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-53
Identity = 131/153 (85.62%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPA----------AEKAPSSAEKKPKAEKKITKE---GGDKKKKKIK 60
           MAP KAEKKPAEKKPA          AEKAP  AEKKPKA KK+ KE   GGDKKKK  K
Sbjct: 1   MAP-KAEKKPAEKKPASEKPVEEKSKAEKAP--AEKKPKAGKKLPKEAGAGGDKKKKMKK 60

Query: 61  KSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITS 120
           KS ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITS
Sbjct: 61  KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITS 120

Query: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141
           REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Moc05g32060 vs. ExPASy Swiss-Prot
Match: Q9LFF6 (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-53
Identity = 125/141 (88.65%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGG-DKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPA KKP AEKAP  AEK PKAEKKITKEGG +KKKKK KK+ ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAGKKP-AEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTSS 141
           GEL+KHAVSEGTKAVTKFTSS
Sbjct: 121 GELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Moc05g32060 vs. ExPASy Swiss-Prot
Match: O65819 (Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 121/137 (88.32%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 6   AEKKPAEKKPAAEKAPSSAEKKPKAEKKITKE--GGDKKKKKIKKSTETYKIYIFKVLKQ 65
           AEKKPAEK P AEKAP  AEKKPKA KK+ K+   GDKKKK+ KK+ ETYKIYIFKVLKQ
Sbjct: 3   AEKKPAEKTPVAEKAP--AEKKPKAGKKLPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQ 62

Query: 66  VHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELA 125
           VHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELA
Sbjct: 63  VHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 122

Query: 126 KHAVSEGTKAVTKFTSS 141
           KHAVSEGTKAVTKFTSS
Sbjct: 123 KHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Moc05g32060 vs. ExPASy TrEMBL
Match: A0A6J1CVU7 (Histone H2B OS=Momordica charantia OX=3673 GN=LOC111015039 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.5e-63
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 140

[Close]

BLAST of Moc05g32060 vs. ExPASy TrEMBL
Match: A0A5D3DN75 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.3e-59
Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKP AEK PSSAEKKPKAEKKI K+ GDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKP-AEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. ExPASy TrEMBL
Match: A0A1S3B6N1 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.3e-59
Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKP AEK PSSAEKKPKAEKKI K+ GDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKP-AEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. ExPASy TrEMBL
Match: A0A6J1ASY7 (Histone H2B OS=Herrania umbratica OX=108875 GN=LOC110420568 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.0e-59
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAP KAEKKPAEKKP AEKAP+SAEK+PKAEKKI+KEGGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAP-KAEKKPAEKKPVAEKAPASAEKRPKAEKKISKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. ExPASy TrEMBL
Match: A0A061ERY7 (Histone H2B OS=Theobroma cacao OX=3641 GN=TCM_021991 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.0e-59
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60
           MAP KAEKKPAEKKP AEKAP+SAEK+PKAEKKI+KEGGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAP-KAEKKPAEKKPVAEKAPASAEKRPKAEKKISKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 141
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Moc05g32060 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 1.0e-54
Identity = 125/141 (88.65%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGG-DKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPA KKP AEKAP  AEK PKAEKKITKEGG +KKKKK KK+ ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAGKKP-AEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTSS 141
           GEL+KHAVSEGTKAVTKFTSS
Sbjct: 121 GELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Moc05g32060 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 1.0e-54
Identity = 131/153 (85.62%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPA----------AEKAPSSAEKKPKAEKKITKE---GGDKKKKKIK 60
           MAP KAEKKPAEKKPA          AEKAP  AEKKPKA KK+ KE   GGDKKKK  K
Sbjct: 1   MAP-KAEKKPAEKKPASEKPVEEKSKAEKAP--AEKKPKAGKKLPKEAGAGGDKKKKMKK 60

Query: 61  KSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITS 120
           KS ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITS
Sbjct: 61  KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITS 120

Query: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141
           REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Moc05g32060 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 208.0 bits (528), Expect = 5.0e-54
Identity = 123/141 (87.23%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKE--GGDKKKKKIKKSTETYKIYIF 60
           MAP  AEKKPAEKKPA  KAP  AEK PKAEKKI+K+  G +KKKKK KKS ETYKIYIF
Sbjct: 1   MAPKAAEKKPAEKKPAG-KAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTS 140
           PGELAKHAVSEGTKAVTKFTS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Moc05g32060 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 6.5e-54
Identity = 129/154 (83.77%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPA----------AEKAPSSAEKKPKAEKKITKE----GGDKKKKKI 60
           MAP KA KKPAEKKPA          AEKAP  AEKKPKA KK+ KE    G +KKKK++
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAP--AEKKPKAGKKLPKEAVTGGVEKKKKRV 60

Query: 61  KKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTIT 120
           KKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTIT
Sbjct: 61  KKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTIT 120

Query: 121 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141
           SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of Moc05g32060 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 6.5e-54
Identity = 128/148 (86.49%), Postives = 130/148 (87.84%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPA-----AEKAPSSAEKKPKAEKKITKE---GGDKKKKKIKKSTET 60
           MAP KAEKKPAEKKP      AEKAP  AEKKPKA KK+ KE   GGDKKKK  KKS ET
Sbjct: 1   MAP-KAEKKPAEKKPVEEKSKAEKAP--AEKKPKAGKKLPKEAGAGGDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 141
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145

The following BLAST results are available for this feature:

BLAST of Moc05g32060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145639.1	7.1e-63	100.00	probable histone H2B.3 [Momordica charantia]	[more]
XP_038903506.1	3.3e-60	97.86	probable histone H2B.3 [Benincasa hispida]	[more]
XP_008442575.1	4.8e-59	96.43	PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like ...	[more]
OMO66199.1	6.3e-59	95.71	Histone H2B [Corchorus capsularis]	[more]
XP_021289604.1	6.3e-59	95.71	histone H2B-like [Herrania umbratica] >EOY07601.1 Histone superfamily protein [T...	[more]

BLAST of Moc05g32060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1SU99	3.0e-56	90.78	Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
O22582	1.3e-54	86.67	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
P40283	1.4e-53	85.62	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
Q9LFF6	1.4e-53	88.65	Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3	[more]
O65819	5.3e-53	88.32	Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1	[more]

BLAST of Moc05g32060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVU7	3.5e-63	100.00	Histone H2B OS=Momordica charantia OX=3673 GN=LOC111015039 PE=3 SV=1	[more]
A0A5D3DN75	2.3e-59	96.43	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 P...	[more]
A0A1S3B6N1	2.3e-59	96.43	Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1	[more]
A0A6J1ASY7	3.0e-59	95.71	Histone H2B OS=Herrania umbratica OX=108875 GN=LOC110420568 PE=3 SV=1	[more]
A0A061ERY7	3.0e-59	95.71	Histone H2B OS=Theobroma cacao OX=3641 GN=TCM_021991 PE=3 SV=1	[more]

BLAST of Moc05g32060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53650.1	1.0e-54	88.65	Histone superfamily protein	[more]
AT5G59910.1	1.0e-54	85.62	Histone superfamily protein	[more]
AT2G37470.1	5.0e-54	87.23	Histone superfamily protein	[more]
AT2G28720.1	6.5e-54	83.77	Histone superfamily protein	[more]
AT3G46030.1	6.5e-54	86.49	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 72..92 score: 75.74 coord: 94..111 score: 76.51 coord: 53..71 score: 80.55 coord: 124..137 score: 92.65 coord: 111..124 score: 92.45
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 43..139 e-value: 1.3E-72 score: 257.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 5..140
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 108..130
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..140 e-value: 1.5E-59 score: 201.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..140
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 4..116 e-value: 2.0E-24 score: 86.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR23428:SF282	HISTONE H2B	coord: 5..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g32060.1	Moc05g32060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity