Moc05g31860 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g31860
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSuppressor protein SRP40-like isoform X2
Locationchr5: 23863279 .. 23863911 (-)
RNA-Seq ExpressionMoc05g31860
SyntenyMoc05g31860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAACTCTCTTCATTTTACCTTGATTGGCTTTGGTTAATAATTTGGTGCATTTTCTGTACTGTGTTTCTTTCATGCATTTTATCAAACATGTTGCAGTCAAAAGAATTAGAGAAGCAGATCACAGAACAGATTCATATGAGAACAAAAGCAGAAAAGAAGCTTAAATTACTGAGGAAAAAGCTCGAATCACTTAACCTTCCTTCCACGACGGTGAAATCAGAGCCTTCAGTTTCGTCGGAAATCTGCGATGGAGAACAGCCGAAAACCCTAATCACAGCTTCGTCTCTCCCGAGCAACGCCCAGGCCACCGGTGAAATTTCTCATTCGGAAGAAGCTAATCCAAATGCTCGAGGTTGTGCCGCCCCGAGCTCATCTGCTTCTGAAATTTGCTGCGACAAAGTTTCGAAAGCGAAGATCGAAAATGGTGGAGATGAGTTCGTTTCAACGGGCGATTCACCGGCAGTTGTTGCCGTAAACTCGCCGGAAAATTCGAAAACCGGCGAGTGGAAGCCGGCGATCACTGAAGGGATTATCGAAGTTCTGAATGATCTAAAGCACGCCAGAGAGAGAATTCAGAGCTCGATGGAGATTAGTGAACTCAACATGATTAAAGTTAGCCCAGTTTGA

mRNA sequence

ATGCCAAAACTCTCTTCATTTTACCTTGATTGGCTTTGGTTAATAATTTGGTGCATTTTCTGTACTGTGTTTCTTTCATGCATTTTATCAAACATGTTGCAGTCAAAAGAATTAGAGAAGCAGATCACAGAACAGATTCATATGAGAACAAAAGCAGAAAAGAAGCTTAAATTACTGAGGAAAAAGCTCGAATCACTTAACCTTCCTTCCACGACGGTGAAATCAGAGCCTTCAGTTTCGTCGGAAATCTGCGATGGAGAACAGCCGAAAACCCTAATCACAGCTTCGTCTCTCCCGAGCAACGCCCAGGCCACCGGTGAAATTTCTCATTCGGAAGAAGCTAATCCAAATGCTCGAGGTTGTGCCGCCCCGAGCTCATCTGCTTCTGAAATTTGCTGCGACAAAGTTTCGAAAGCGAAGATCGAAAATGGTGGAGATGAGTTCGTTTCAACGGGCGATTCACCGGCAGTTGTTGCCGTAAACTCGCCGGAAAATTCGAAAACCGGCGAGTGGAAGCCGGCGATCACTGAAGGGATTATCGAAGTTCTGAATGATCTAAAGCACGCCAGAGAGAGAATTCAGAGCTCGATGGAGATTAGTGAACTCAACATGATTAAAGTTAGCCCAGTTTGA

Coding sequence (CDS)

ATGCCAAAACTCTCTTCATTTTACCTTGATTGGCTTTGGTTAATAATTTGGTGCATTTTCTGTACTGTGTTTCTTTCATGCATTTTATCAAACATGTTGCAGTCAAAAGAATTAGAGAAGCAGATCACAGAACAGATTCATATGAGAACAAAAGCAGAAAAGAAGCTTAAATTACTGAGGAAAAAGCTCGAATCACTTAACCTTCCTTCCACGACGGTGAAATCAGAGCCTTCAGTTTCGTCGGAAATCTGCGATGGAGAACAGCCGAAAACCCTAATCACAGCTTCGTCTCTCCCGAGCAACGCCCAGGCCACCGGTGAAATTTCTCATTCGGAAGAAGCTAATCCAAATGCTCGAGGTTGTGCCGCCCCGAGCTCATCTGCTTCTGAAATTTGCTGCGACAAAGTTTCGAAAGCGAAGATCGAAAATGGTGGAGATGAGTTCGTTTCAACGGGCGATTCACCGGCAGTTGTTGCCGTAAACTCGCCGGAAAATTCGAAAACCGGCGAGTGGAAGCCGGCGATCACTGAAGGGATTATCGAAGTTCTGAATGATCTAAAGCACGCCAGAGAGAGAATTCAGAGCTCGATGGAGATTAGTGAACTCAACATGATTAAAGTTAGCCCAGTTTGA

Protein sequence

MPKLSSFYLDWLWLIIWCIFCTVFLSCILSNMLQSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLITASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV
Homology
BLAST of Moc05g31860 vs. NCBI nr
Match: XP_022145707.1 (uncharacterized protein LOC111015099 [Momordica charantia])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +SKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI
Sbjct: 52  RSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 111

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
           TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD
Sbjct: 112 TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 171

Query: 154 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV
Sbjct: 172 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228

BLAST of Moc05g31860 vs. NCBI nr
Match: XP_023538931.1 (uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 6.3e-55
Identity = 125/177 (70.62%), Postives = 145/177 (81.92%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEKQITEQ  MRTKAEKKL+LL+KKLESLNL  T + SEPS+SSEICD ++PKTL 
Sbjct: 52  RSTELEKQITEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDDDEPKTLT 111

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
           TA+SLPSN+Q  GEISHS+E NPNARG  + SSS SEIC ++ SK KIEN GDEF S  D
Sbjct: 112 TATSLPSNSQTIGEISHSDEENPNARGSTSSSSSGSEICSNESSKEKIENSGDEFNSVND 171

Query: 154 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A+VAVNSPE ++TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 172 SLALVAVNSPEEAETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Moc05g31860 vs. NCBI nr
Match: KAG7027980.1 (hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-52
Identity = 123/177 (69.49%), Postives = 142/177 (80.23%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEKQITEQ  MRTKAEKKL+LL KKLESLNL  T + SEPS+SSEICD ++PKTL 
Sbjct: 106 RSTELEKQITEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLT 165

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
            A+SLP N+QA GEISHS+E NPNARG  + SSS SEIC ++ SK KIEN GD F S  D
Sbjct: 166 AATSLPINSQAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDD 225

Query: 154 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A+VAVNSPE ++TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 226 SLALVAVNSPEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 282

BLAST of Moc05g31860 vs. NCBI nr
Match: XP_023005738.1 (uncharacterized protein LOC111498645 [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-50
Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEK+ITEQ  MRTKAEKKL+LL+KKLESL+L  T + SEPS+SSEICD ++PKTL 
Sbjct: 52  RSTELEKKITEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLT 111

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
            A+SLP N+Q  GEISHS+E NPNARG  + SSS SEI  ++ SK KIEN G+EF S  D
Sbjct: 112 AATSLPINSQTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDD 171

Query: 154 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A VAVNSPE ++TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 172 SLAFVAVNSPEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Moc05g31860 vs. NCBI nr
Match: XP_038906280.1 (uncharacterized protein LOC120092141 [Benincasa hispida])

HSP 1 Score: 198.4 bits (503), Expect = 6.3e-47
Identity = 119/178 (66.85%), Postives = 139/178 (78.09%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEKQIT+QI M+TKAEKKL+LL+KKL SLNL +T V SE SVSSEICD ++PKTLI
Sbjct: 62  RSTELEKQITKQIQMKTKAEKKLQLLKKKLGSLNLSTTMVNSEASVSSEICDEDEPKTLI 121

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
              SL SN++A GEISH EE N NARG  + +SSASEIC D+ SK KI     EF S  D
Sbjct: 122 EVPSLLSNSKAIGEISHLEEENRNARGSTSSNSSASEICSDEPSKTKIGKCEKEFDSVDD 181

Query: 154 SPAVVAVNSPENSKTG-EWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A+VAVNSP  S+TG E KP I+E IIEVLNDLKHARE I+SSM+I E+NMI+VSPV
Sbjct: 182 SLAIVAVNSPGKSETGDELKPLISERIIEVLNDLKHARETIRSSMKICEVNMIEVSPV 239

BLAST of Moc05g31860 vs. ExPASy TrEMBL
Match: A0A6J1CXG5 (uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015099 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.8e-87
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +SKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI
Sbjct: 52  RSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 111

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
           TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD
Sbjct: 112 TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 171

Query: 154 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV
Sbjct: 172 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228

BLAST of Moc05g31860 vs. ExPASy TrEMBL
Match: A0A6J1L305 (uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.0e-50
Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEK+ITEQ  MRTKAEKKL+LL+KKLESL+L  T + SEPS+SSEICD ++PKTL 
Sbjct: 52  RSTELEKKITEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLT 111

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
            A+SLP N+Q  GEISHS+E NPNARG  + SSS SEI  ++ SK KIEN G+EF S  D
Sbjct: 112 AATSLPINSQTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDD 171

Query: 154 SPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A VAVNSPE ++TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 172 SLAFVAVNSPEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Moc05g31860 vs. ExPASy TrEMBL
Match: A0A5A7TKN7 (Suppressor protein SRP40-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002050 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 113/178 (63.48%), Postives = 135/178 (75.84%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEKQIT+QI M+ +AEKKL+LL+KKLESLNL ST V SE S+SSEIC+ ++PKTLI
Sbjct: 38  RSSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLI 97

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
               LP N++   EISHSEE N NARG  A + SAS+I  D+ SK K  + G EF S  D
Sbjct: 98  EVPPLPRNSKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDD 157

Query: 154 SPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A+VAV+SPE S+TGE  KP I+E IIEVLNDLK AR RIQSSMEI E +MI+VSPV
Sbjct: 158 SLAIVAVDSPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 214

BLAST of Moc05g31860 vs. ExPASy TrEMBL
Match: A0A1S3B6U8 (uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 113/178 (63.48%), Postives = 135/178 (75.84%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEKQIT+QI M+ +AEKKL+LL+KKLESLNL ST V SE S+SSEIC+ ++PKTLI
Sbjct: 119 RSSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLI 178

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
               LP N++   EISHSEE N NARG  A + SAS+I  D+ SK K  + G EF S  D
Sbjct: 179 EVPPLPRNSKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDD 238

Query: 154 SPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A+VAV+SPE S+TGE  KP I+E IIEVLNDLK AR RIQSSMEI E +MI+VSPV
Sbjct: 239 SLAIVAVDSPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295

BLAST of Moc05g31860 vs. ExPASy TrEMBL
Match: A0A0A0LDB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 8.1e-40
Identity = 108/178 (60.67%), Postives = 132/178 (74.16%), Query Frame = 0

Query: 34  QSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLI 93
           +S ELEKQIT+QI M+ +AEKKL+LL+KKLESLNL ST V SE SVSSEIC+  +PKT I
Sbjct: 53  RSSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPI 112

Query: 94  TASSLPSNAQATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGD 153
               LPS+++   EI HSEE N NARG  + + SAS+I  DK SK KI N G E  S  D
Sbjct: 113 EVQPLPSHSKGISEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDD 172

Query: 154 SPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 211
           S A+VAV+SP  S+T E  KP I+E IIEVLNDLK ARERIQSSM++ + +MI+VSP+
Sbjct: 173 SLAIVAVDSPAKSETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145707.11.8e-8699.44uncharacterized protein LOC111015099 [Momordica charantia][more]
XP_023538931.16.3e-5570.62uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo][more]
KAG7027980.11.7e-5269.49hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023005738.12.1e-5067.23uncharacterized protein LOC111498645 [Cucurbita maxima][more]
XP_038906280.16.3e-4766.85uncharacterized protein LOC120092141 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CXG58.8e-8799.44uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1L3051.0e-5067.23uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645... [more]
A0A5A7TKN76.0e-4363.48Suppressor protein SRP40-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B6U86.0e-4363.48uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=... [more]
A0A0A0LDB58.1e-4060.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..122
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 36..114
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 124..201
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 36..114
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 124..201
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g31860.1Moc05g31860.1mRNA