Moc05g31280 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g31280
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DVL family protein
Location	chr5: 23487379 .. 23489223 (-)
RNA-Seq Expression	Moc05g31280
Synteny	Moc05g31280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAGAGGGGGAGCAGCAGCCATTGTAGAGAGCTTGGGAATGATCACAATGGAGGGTGTGAAGAAGGATCAAATGGGTGCAAATCTTTTGGGGAGAAGTGTAACAATTTGGTGAAGAAACAGAGGACTAAATTCTATATTCTCAGAAGGTGCATTGCAATGCTGGTGTGTTGGAGGGACAGAGGAGAGTCTTGAATTTTTTTTTTCAAACCTCTGATCTCGAGAGATAAGTACATGCTAAATATTACCAGTGAATTATGTTCGGGTGAGCGAGAGGAGTCTTGAATTAAGAAAATAGAAAGAGGGAGAGATTCGTATGTTATATATTATTGTAAGGTTAGTTTTGATGTGTATGATATATTTTAGTGATAGCTTTATGAAAGATTTTATTATTGTTATTGTTTTTGATGATATTGGTTTGTGGTGTTCTTGATTATATATATGGGTTTGGATTGGATTTCTCAAATGGGTTTTTTTTAAATTAATTATTTGAATCCAAAAATGTATGTATATGGCTTTTTATTTGAGTTCCTAGTTTGTGTGTTGATTTCTAATTATCCATTTCTTGTTTTAATTTCATATATCTCTTTTAATTGTCTCCTCAATTTCTTCCATTTGTTTCATCTCTCTCCCATATCTCCTCCATTTCTTTCTTGAGCTTTTCTTCTCTCTCTCTACTCCACTTCTTTCTTTAGTTTCATTTCTCTTGGAATTTCATGTATTCTTAATGATTTTCTAGAGTCCATAAATTATTTGGAATAATATTGTGACGTTGTGTTATGATATATCACCATAAATATGACAAGAAAAATATTGATTTTTTTTTTTTTTTTGTATTTCACATGGTCGTCTAACATTACAATGATAAAGTATCTGTCGGGTACCAATTATATAGCGCATTTCACCATCCGTAAAAGAGATATAATATGCTAACAGGACAAATATTACCATTTATTTATGTGTGCAATTAATAAAATAAATGAGGCATGAAATTTGTTGTTGTTATTGAGAAAGTGGAGGATAATAATAATAATAGTTTTTAGCACTCAATATAATTGATTGATTTGGAAAAAAAAAAAAAAAAAAGCTTGATGGCAGACATTTTTGCTCCCCCAAACCCATCAGCCCAAGATGGAAAAAGAATGATAAAAAACTCAATGAACTTTTTCATAAATTAAATTTAATGTTGGTAAAAATGCAAACATATGGTTTCACATTAGTTTTCTTTATGAAGTGTTTCACATTAGTAGGCACAAAGGACGATATCATTTCGAGTGAAAATCAAAAGTAAAATCAAATGCGCGTACTAGTGGAGTAAAGAAGGAAGGAGGATCTTTTCTTTGTTGTTAAACAAATTAACAAATTATAAGTTTAGCTTTTGAATTTTCAACGCTGTGTTTAATATAAGTTTCTAAAGTATTGGGTAGGTTTTTGAGCTTTTACATTTTGGGTGTAATAAATTTTAAAGTCTAGGTACCTATCAGGCTAGCTATTAAACAAAAGTTCATAGACCAAACTTGTAATTTATCATTTAAACTTTTTTTTTTAAATTCATTAATCACTCCCTTCAACTTCCACAGTCGAAAGATTAAACATATAAAAATGTTAGCACGTGAAAATTCTCAAACTCATTTTGGTAGATAGTTGTCGGGATCATCTCCAATCTGGGCCTCAGCCTTTGTTTGGTCGGCCTTCACAAATCACCTTCCGCCCGACAGTTTCTTCGAGACAGTCTGCTCTTGCTCAGGTGCCTCAAGTGGTACAGATGGTACTCGTGATGCTAGCGATTCCTACGTAGCCGGTGGAGGAGCTAAAGTTGTAAACTTGATGCTGCTGTTTTGA

mRNA sequence

ATGAGGGAGAGGGGGAGCAGCAGCCATTGTAGAGAGCTTGGGAATGATCACAATGGAGGGTGTGAAGAAGGATCAAATGGGTGCAAATCTTTTGGGGAGAAGTGTAACAATTTGGTGAAGAAACAGAGGACTAAATTCTATATTCTCAGAAGGTGCATTGCAATGCTGTTGTCGGGATCATCTCCAATCTGGGCCTCAGCCTTTGTTTGGTCGGCCTTCACAAATCACCTTCCGCCCGACAGTTTCTTCGAGACAGTCTGCTCTTGCTCAGGTGCCTCAAGTGGTACAGATGGTACTCGTGATGCTAGCGATTCCTACGTAGCCGGTGGAGGAGCTAAAGTTGTAAACTTGATGCTGCTGTTTTGA

Coding sequence (CDS)

ATGAGGGAGAGGGGGAGCAGCAGCCATTGTAGAGAGCTTGGGAATGATCACAATGGAGGGTGTGAAGAAGGATCAAATGGGTGCAAATCTTTTGGGGAGAAGTGTAACAATTTGGTGAAGAAACAGAGGACTAAATTCTATATTCTCAGAAGGTGCATTGCAATGCTGTTGTCGGGATCATCTCCAATCTGGGCCTCAGCCTTTGTTTGGTCGGCCTTCACAAATCACCTTCCGCCCGACAGTTTCTTCGAGACAGTCTGCTCTTGCTCAGGTGCCTCAAGTGGTACAGATGGTACTCGTGATGCTAGCGATTCCTACGTAGCCGGTGGAGGAGCTAAAGTTGTAAACTTGATGCTGCTGTTTTGA

Protein sequence

MRERGSSSHCRELGNDHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAMLLSGSSPIWASAFVWSAFTNHLPPDSFFETVCSCSGASSGTDGTRDASDSYVAGGGAKVVNLMLLF

Homology

[Close]

BLAST of Moc05g31280 vs. NCBI nr
Match: XP_038904423.1 (uncharacterized protein LOC120090788 [Benincasa hispida])

HSP 1 Score: 70.9 bits (172), Expect = 8.8e-09
Identity = 42/63 (66.67%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 6  SSSHCRELGNDHNGGCEEG------SNG-----CKSFGEKCNNLVKKQRTKFYILRRCIA 58
          SSS+CR L +  NGG E G      +NG     CKSFGEKCNNLVKKQRTKFYILRRCIA
Sbjct: 5  SSSYCRRLSS--NGGGENGNDNANNNNGFEGGECKSFGEKCNNLVKKQRTKFYILRRCIA 64

[Close]

BLAST of Moc05g31280 vs. NCBI nr
Match: XP_023528782.1 (uncharacterized protein LOC111791613 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-08
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 2  RERGSSSH--CR----ELGNDHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAM 58
          RE  SSS   CR    ++ N+++ G  EG  GCKSFGEKC NLVKKQRTKFYILRRCIAM
Sbjct: 3  RESSSSSRRCCRGGNGDINNNNDNGF-EGGGGCKSFGEKCTNLVKKQRTKFYILRRCIAM 62

[Close]

BLAST of Moc05g31280 vs. NCBI nr
Match: XP_022983170.1 (uncharacterized protein LOC111481804 [Cucurbita maxima])

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-08
Identity = 40/63 (63.49%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 2  RERGSSS----HCRELGNDHNGGCE---EGSNGCKSFGEKCNNLVKKQRTKFYILRRCIA 58
          RE  SSS    +CR    D N   +   EG  GCKSFGEKC NLVKKQRTKFYILRRCIA
Sbjct: 3  RESSSSSSSRRYCRGGNGDFNNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

[Close]

BLAST of Moc05g31280 vs. NCBI nr
Match: XP_022935492.1 (uncharacterized protein LOC111442348 [Cucurbita moschata])

HSP 1 Score: 68.2 bits (165), Expect = 5.7e-08
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 2  RERGSS-SHCR----ELGNDHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAML 58
          RE  SS  +CR    ++ N+++ G  EG  GCKSFGEKC NLVKKQRTKFYILRRCIAML
Sbjct: 3  RESSSSRRYCRGGNGDINNNNDNGF-EGGGGCKSFGEKCTNLVKKQRTKFYILRRCIAML 62

[Close]

BLAST of Moc05g31280 vs. NCBI nr
Match: XP_008443575.1 (PREDICTED: uncharacterized protein LOC103487131 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-08
Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 6  SSSHCRELGNDHNG-------------GCEEGSNG-CKSFGEKCNNLVKKQRTKFYILRR 58
          SS +CR L +  NG             G E+ + G CKSFGEKCNNLVKKQRTKFYILRR
Sbjct: 5  SSRYCRRLNSSSNGRNGENGENNKKNNGFEDDNAGECKSFGEKCNNLVKKQRTKFYILRR 64

[Close]

BLAST of Moc05g31280 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 16 DHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAMLL 58
          + NG CE     CK+FG+KC+++VKKQR KFYILRRCIAML+
Sbjct: 4  EENGTCEP----CKTFGQKCSHVVKKQRAKFYILRRCIAMLV 41

[Close]

BLAST of Moc05g31280 vs. ExPASy TrEMBL
Match: A0A6J1J510 (uncharacterized protein LOC111481804 OS=Cucurbita maxima OX=3661 GN=LOC111481804 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08
Identity = 40/63 (63.49%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 2  RERGSSS----HCRELGNDHNGGCE---EGSNGCKSFGEKCNNLVKKQRTKFYILRRCIA 58
          RE  SSS    +CR    D N   +   EG  GCKSFGEKC NLVKKQRTKFYILRRCIA
Sbjct: 3  RESSSSSSSRRYCRGGNGDFNNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

[Close]

BLAST of Moc05g31280 vs. ExPASy TrEMBL
Match: A0A6J1F5Q1 (uncharacterized protein LOC111442348 OS=Cucurbita moschata OX=3662 GN=LOC111442348 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.8e-08
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 2  RERGSS-SHCR----ELGNDHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAML 58
          RE  SS  +CR    ++ N+++ G  EG  GCKSFGEKC NLVKKQRTKFYILRRCIAML
Sbjct: 3  RESSSSRRYCRGGNGDINNNNDNGF-EGGGGCKSFGEKCTNLVKKQRTKFYILRRCIAML 62

[Close]

BLAST of Moc05g31280 vs. ExPASy TrEMBL
Match: A0A1S3B7W9 (uncharacterized protein LOC103487131 OS=Cucumis melo OX=3656 GN=LOC103487131 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.6e-08
Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 6  SSSHCRELGNDHNG-------------GCEEGSNG-CKSFGEKCNNLVKKQRTKFYILRR 58
          SS +CR L +  NG             G E+ + G CKSFGEKCNNLVKKQRTKFYILRR
Sbjct: 5  SSRYCRRLNSSSNGRNGENGENNKKNNGFEDDNAGECKSFGEKCNNLVKKQRTKFYILRR 64

[Close]

BLAST of Moc05g31280 vs. ExPASy TrEMBL
Match: A0A2P6RAY7 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0470051 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.0e-07
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 6  SSSHCRELGN-DHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAMLL 58
          ++S     GN D+NGGCE     C+SFG+KC +L+KKQRTKFYILRRCIAMLL
Sbjct: 16 TASFNNSTGNLDNNGGCEP----CRSFGQKCTHLMKKQRTKFYILRRCIAMLL 64

[Close]

BLAST of Moc05g31280 vs. ExPASy TrEMBL
Match: G7L3V3 (DVL family protein OS=Medicago truncatula OX=3880 GN=11420965 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 8  SHCRELGNDHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAMLL 58
          S  R   + H    +EG + CKSFG+KC++LVKKQR KFYILRRCIAMLL
Sbjct: 7  SSTRNQNSTHQHQEQEGCDPCKSFGQKCSHLVKKQRAKFYILRRCIAMLL 56

[Close]

BLAST of Moc05g31280 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 57.4 bits (137), Expect = 9.3e-09
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 16 DHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAMLL 58
          + NG CE     CK+FG+KC+++VKKQR KFYILRRCIAML+
Sbjct: 4  EENGTCEP----CKTFGQKCSHVVKKQRAKFYILRRCIAMLV 41

[Close]

BLAST of Moc05g31280 vs. TAIR 10
Match: AT3G53232.1 (ROTUNDIFOLIA like 1 )

HSP 1 Score: 44.3 bits (103), Expect = 8.2e-05
Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 15 NDHNGGCEEGSNGCKSFGEKCNNLVKKQRTKFYILRRCIAMLLSG 60
          N  +G C+      K+F  KC+++V+KQR KFYIL RC+AML+ G
Sbjct: 5  NSTSGTCKPS----KTFKAKCSHMVRKQRAKFYILGRCLAMLVCG 45

[Close]

BLAST of Moc05g31280 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 0


Query: 27 GCKSFGEKCNNLVKKQRTKFYILRRCIAMLL 58
          G   F  KC  LVK+QR +FYI+RRC+ ML+
Sbjct: 36 GKYGFTRKCGRLVKEQRARFYIMRRCVVMLI 66

[Close]

BLAST of Moc05g31280 vs. TAIR 10
Match: AT4G13395.1 (ROTUNDIFOLIA like 12 )

HSP 1 Score: 40.8 bits (94), Expect = 9.0e-04
Identity = 16/27 (59.26%), Postives = 23/27 (85.19%), Query Frame = 0


Query: 31 FGEKCNNLVKKQRTKFYILRRCIAMLL 58
          FG++C  + K+QRT+ YILRRC++MLL
Sbjct: 20 FGDRCLLMAKQQRTRLYILRRCVSMLL 46

The following BLAST results are available for this feature:

BLAST of Moc05g31280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904423.1	8.8e-09	66.67	uncharacterized protein LOC120090788 [Benincasa hispida]	[more]
XP_023528782.1	3.3e-08	64.52	uncharacterized protein LOC111791613 [Cucurbita pepo subsp. pepo]	[more]
XP_022983170.1	4.3e-08	63.49	uncharacterized protein LOC111481804 [Cucurbita maxima]	[more]
XP_022935492.1	5.7e-08	63.93	uncharacterized protein LOC111442348 [Cucurbita moschata]	[more]
XP_008443575.1	7.4e-08	59.09	PREDICTED: uncharacterized protein LOC103487131 [Cucumis melo]	[more]

BLAST of Moc05g31280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XXN8	1.3e-07	64.29	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]

BLAST of Moc05g31280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J510	2.1e-08	63.49	uncharacterized protein LOC111481804 OS=Cucurbita maxima OX=3661 GN=LOC111481804...	[more]
A0A6J1F5Q1	2.8e-08	63.93	uncharacterized protein LOC111442348 OS=Cucurbita moschata OX=3662 GN=LOC1114423...	[more]
A0A1S3B7W9	3.6e-08	59.09	uncharacterized protein LOC103487131 OS=Cucumis melo OX=3656 GN=LOC103487131 PE=...	[more]
A0A2P6RAY7	3.0e-07	64.15	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0470051 PE=4...	[more]
G7L3V3	2.6e-06	62.00	DVL family protein OS=Medicago truncatula OX=3880 GN=11420965 PE=4 SV=1	[more]

BLAST of Moc05g31280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36985.1	9.3e-09	64.29	DVL family protein	[more]
AT3G53232.1	8.2e-05	48.89	ROTUNDIFOLIA like 1	[more]
AT3G55515.1	6.9e-04	54.84	ROTUNDIFOLIA like 7	[more]
AT4G13395.1	9.0e-04	59.26	ROTUNDIFOLIA like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 40..58 e-value: 2.1E-10 score: 40.1
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 16..57
None	No IPR available	PANTHER	PTHR33102:SF8	DVL FAMILY PROTEIN	coord: 16..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g31280.1	Moc05g31280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane