Moc05g30570 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g30570
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosome production factor 2 homolog
Location	chr5: 22847128 .. 22849071 (+)
RNA-Seq Expression	Moc05g30570
Synteny	Moc05g30570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAAGTTAGAACTCCCAAAAATGGAAAAGTTAAACGAGAGCTGGAGAAACGCGCTCCCAAACTTGTAAGTTCTTCCATTACCGAGTTTGTTTGTAGGGTAGTCTAGAGTTTCGGGTGAATGACTAAAAGCATGTTAAAGAAGTTTGTATGACTTATTAATTGTTTTTTTTCCTGTGTTGTTGGATTGGGTTATGGATTTGCTCCGCAGGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGTACAAAAACGAGCAGCGTGCTGAATGCAGTATTGACGGAGATTTATCACCTGAAGAAAGAAAGCGCTGTCAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCATCTTTGGAATTTTTCTCTCTGAAAACTGATTGCAGCCTCATCGTGGTTCGTACAATTTGTGCTTAATTTTCTTTGAACTATATTTGCTTAGTATAGTAGACGGTATTCTAATAGGCATCTTAATCAATTTATTTAGCTTATTGTCTAGGAGTTCTGCAGTGAATGCTTTTTTTTTGTATTCTATTTTACATTTCAGTTTTGCATAGGAAGCTGGTTTCTTTGTTCTCTTCATTACAAATGAAGAGCTATTTGATCTAGAATTAGTTCTAGCTGCGTAGAATTTCCTTTTAGATTAATTTTTGTTGGGGTGAATGCTTCTAGTTTTTCCCTAATTAAACATCTCAAATGATCGATGAACTTAGCAGTTCTCAAATGGATGAACCTTTGTGAAAAAGTATAACCATGATGTGCTTTTTCTTTGGGCAAGGGTACACAAAGAATTTAGGGAACTTCAGTTTAGGAGCCATCCTATTTATGAATAGGCAAATCTCTGTTTGTATGAGTAAAAATTTTGCAACCTTTTTCCTCTTAATGAGAACATGTACATTATTTTGTTCAATCTATGTCAAGGGGTCAAAATACTCCTCTTCTTGCTTTCTTGTTTTGAGTTCTCTGTTGATGTATTTATTGCACCTCTTTGCAGTATGGTTCTCACTCAAAGAAGCGACCCGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACCTTATCGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCCTTCGCATACGATAAGAAACTAGCTCCAAAAGTGGGGTCGAAGCCTTTCATCACCTTCATTGGTGAAGGATTTGAGAGCGTAGAAGAGCTGAAGCATTTAAAGGAAGTGTTGCTTGATCTATTTAGAGGAGAGGTAAAAATCCTTATGCTTTGACTGACTTGAGTGAATGGTCAGATATAAAGATATGTATGGTTTTTGCAGGTTGTAGAGAATTTAAATCTTGCCGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTACACTAGTCCCAAGAATGGAACTAGTTGAAGTCGGTCCCTCAATGGATATGGTAGTTCGCCGCCACCGACTTCCTAGTGATGGCCTAAGAAAGGAAGCCATGAAAACAGCCAAGGATCAGGCCAAGAAGAAGGTCTAATGGCTATCTTTTTAGATAAATGCACTTCATTTGTGTCTACTAAGTTGTTTGTCTAATCTTGATGTTTATTTCTTCCAGGAGAAAAATGTCAGCGTGGATGCAATTCAAGGCAAGATTGGAAGGATATATATTCCTGATCAGAAGGTATGCACATCTCTCTATCTCTTTCTGTACTTGTGTTCTCTTCACTCCTTTTGCTATGTCGGTCATTTGACTAGTTTTGATACTCTTTTCTGGCCTCATAGGTTGGAGAAATGGCTATACCTAACAAATCGAAAGGAGTGAAGAAAGAACGCCGTGAAGCGAAAATGAAAAATAGCACTGATGGGCCAGCACCTAAAAAATCAAAAGAAGATTCAGAATAG

mRNA sequence

ATGTTGAAAGTTAGAACTCCCAAAAATGGAAAAGTTAAACGAGAGCTGGAGAAACGCGCTCCCAAACTTGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGTACAAAAACGAGCAGCGTGCTGAATGCAGTATTGACGGAGATTTATCACCTGAAGAAAGAAAGCGCTGTCAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCATCTTTGGAATTTTTCTCTCTGAAAACTGATTGCAGCCTCATCGTGTATGGTTCTCACTCAAAGAAGCGACCCGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACCTTATCGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCCTTCGCATACGATAAGAAACTAGCTCCAAAAGTGGGGTCGAAGCCTTTCATCACCTTCATTGGTGAAGGATTTGAGAGCGTAGAAGAGCTGAAGCATTTAAAGGAAGTGTTGCTTGATCTATTTAGAGGAGAGGTTGTAGAGAATTTAAATCTTGCCGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTACACTAGTCCCAAGAATGGAACTAGTTGAAGTCGGTCCCTCAATGGATATGGTAGTTCGCCGCCACCGACTTCCTAGTGATGGCCTAAGAAAGGAAGCCATGAAAACAGCCAAGGATCAGGCCAAGAAGAAGGAGAAAAATGTCAGCGTGGATGCAATTCAAGGCAAGATTGGAAGGATATATATTCCTGATCAGAAGGTTGGAGAAATGGCTATACCTAACAAATCGAAAGGAGTGAAGAAAGAACGCCGTGAAGCGAAAATGAAAAATAGCACTGATGGGCCAGCACCTAAAAAATCAAAAGAAGATTCAGAATAG

Coding sequence (CDS)

ATGTTGAAAGTTAGAACTCCCAAAAATGGAAAAGTTAAACGAGAGCTGGAGAAACGCGCTCCCAAACTTGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGTACAAAAACGAGCAGCGTGCTGAATGCAGTATTGACGGAGATTTATCACCTGAAGAAAGAAAGCGCTGTCAAGTATTCTCGTAAGAATGATGGAATTAAACCATTTGAAAGTGGCGGCGATGCATCTTTGGAATTTTTCTCTCTGAAAACTGATTGCAGCCTCATCGTGTATGGTTCTCACTCAAAGAAGCGACCCGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACCTTATCGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCCTTCGCATACGATAAGAAACTAGCTCCAAAAGTGGGGTCGAAGCCTTTCATCACCTTCATTGGTGAAGGATTTGAGAGCGTAGAAGAGCTGAAGCATTTAAAGGAAGTGTTGCTTGATCTATTTAGAGGAGAGGTTGTAGAGAATTTAAATCTTGCCGGATTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTACACTAGTCCCAAGAATGGAACTAGTTGAAGTCGGTCCCTCAATGGATATGGTAGTTCGCCGCCACCGACTTCCTAGTGATGGCCTAAGAAAGGAAGCCATGAAAACAGCCAAGGATCAGGCCAAGAAGAAGGAGAAAAATGTCAGCGTGGATGCAATTCAAGGCAAGATTGGAAGGATATATATTCCTGATCAGAAGGTTGGAGAAATGGCTATACCTAACAAATCGAAAGGAGTGAAGAAAGAACGCCGTGAAGCGAAAATGAAAAATAGCACTGATGGGCCAGCACCTAAAAAATCAAAAGAAGATTCAGAATAG

Protein sequence

MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKNSTDGPAPKKSKEDSE

Homology

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BLAST of Moc05g30570 vs. NCBI nr
Match: XP_022144774.1 (ribosome production factor 2 homolog [Momordica charantia] >XP_022144775.1 ribosome production factor 2 homolog [Momordica charantia])

HSP 1 Score: 609.0 bits (1569), Expect = 2.3e-170
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVK ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKXERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
           STDGPAPKKSKEDSE
Sbjct: 301 STDGPAPKKSKEDSE 315

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BLAST of Moc05g30570 vs. NCBI nr
Match: KAG6580669.1 (Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 577.0 bits (1486), Expect = 9.8e-161
Identity = 292/315 (92.70%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVK+ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. NCBI nr
Match: XP_022934916.1 (ribosome production factor 2 homolog [Cucurbita moschata] >XP_023527626.1 ribosome production factor 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVK+ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. NCBI nr
Match: XP_022983029.1 (ribosome production factor 2 homolog [Cucurbita maxima])

HSP 1 Score: 575.5 bits (1482), Expect = 2.9e-160
Identity = 292/315 (92.70%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVK+ERREAKMK+
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKS 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. NCBI nr
Match: KAG7017424.1 (Ribosome production factor 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 575.5 bits (1482), Expect = 2.9e-160
Identity = 290/315 (92.06%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MA+P+KSKGVK+ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAMPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. ExPASy Swiss-Prot
Match: Q9LUG5 (Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g23620 PE=2 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 7.4e-127
Identity = 225/315 (71.43%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           M+++RTPK GK KR LE RAPKLVETGKKTLILHGTKTS+ L++V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+ I+PFESGG+ SLEFFS KTDCS+ VYGSH+KKRPDNLV+GR YDH +YDLIEVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKS+ +F+YDKK AP  G+KPFI FIGEGFE+V ELKHLKEVL DLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
            GLDR YVC+AISP KVFLTHCAL+LKKSG++VPRMELVEVGPSMD+V+RR+RLP+D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAM+T+KD+ KKKEKNV  DA+ GK G+IY+PDQK+ EM + +KSKG K+ER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 301 STDGPAPKKSKEDSE 316
             +  A KK K  SE
Sbjct: 301 KEETVA-KKMKVSSE 314

[Close]

BLAST of Moc05g30570 vs. ExPASy Swiss-Prot
Match: Q9AWM9 (Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513800 PE=2 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.2e-123
Identity = 221/309 (71.52%), Postives = 268/309 (86.73%), Query Frame = 0


Query: 4   VRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSRK 63
           +R P++ + KREL K APKLVETGKKTLILHGTKTS+VLN+VL +++HLK+++AVKYS+K
Sbjct: 5   IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKK 64

Query: 64  NDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIEN 123
           ND I+PFESGG+ SLEFFSLKTDCSLIVYGSHSKKRP+NLV+GRTYDHHIYDL+EVG+EN
Sbjct: 65  NDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVEN 124

Query: 124 FKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAGL 183
           +KS+ S+ YDKKLAPK+GSKPF  FIGE FESVEELKHLKEVLLDLF+GEVVENLNLAG+
Sbjct: 125 YKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGV 184

Query: 184 DRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKEA 243
           DRV+VCTAISP  V++ HCALRLK+SGT +PR+ELVEVGPSMD+VVRRHR P + L+KEA
Sbjct: 185 DRVFVCTAISPTTVYMMHCALRLKRSGTSIPRIELVEVGPSMDLVVRRHRYPVESLKKEA 244

Query: 244 MKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKNSTD 303
           MKTA D AKK  KNV+ D + GK+G++YIPDQ++ +M++ N  KG+K+ERREAK KN   
Sbjct: 245 MKTA-DHAKKM-KNVTKDPVHGKLGKVYIPDQQIAKMSLSNDVKGLKRERREAK-KNKDH 304

Query: 304 GPAPKKSKE 313
               K + E
Sbjct: 305 SKKQKINPE 310

[Close]

BLAST of Moc05g30570 vs. ExPASy Swiss-Prot
Match: Q9H7B2 (Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 7.3e-58
Identity = 132/293 (45.05%), Postives = 183/293 (62.46%), Query Frame = 0


Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSR 62
           +V  PK  + KR LEKR PKL E  K  +++ G   ++ +  VL ++Y LKK   V Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKK 65

Query: 63  KNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCSL ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 123 NFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAG 182
           NF S+      K   P+ G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 NFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 243 AMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERRE 296
           +MK  K    KK+KN+S D      GRI++  Q + ++    K KG+KK   E
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLKKRPAE 290

[Close]

BLAST of Moc05g30570 vs. ExPASy Swiss-Prot
Match: Q2YDN6 (Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.5e-58
Identity = 132/298 (44.30%), Postives = 185/298 (62.08%), Query Frame = 0


Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSR 62
           +V  PK  + KR LEKR PKL E  K  +++ G   +S +  VL ++Y LKK   + Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKK 65

Query: 63  KNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCSL ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDIIELGIE 125

Query: 123 NFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAG 182
            F S+      K   P+ G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 KFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 243 AMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 301
           +MK  K    KK+KN+S D      GRI++  Q + ++    K KG+KK   E K ++
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLKKRPAERKAED 295

[Close]

BLAST of Moc05g30570 vs. ExPASy Swiss-Prot
Match: Q9JJ80 (Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-57
Identity = 139/309 (44.98%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKYSR 62
           KV  PK  + KR LEKR PKL E  K  +++ G   ++ +  VL ++Y LKK   V Y +
Sbjct: 6   KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKK 65

Query: 63  KNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCSL ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 123 NFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNLAG 182
            F S+      K   P+ G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 KFVSLKDIKTSK--CPE-GTKPMLIFAGDDFDVTEDFRRLKNLLIDFFRGPTVSNVRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  KV+     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKVYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVMRRTHLASDDLYKL 245

Query: 243 AMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKNST 302
           +MK  K    KK KN+S D      GRI++  Q + ++    K KG+KK   E    N  
Sbjct: 246 SMKVPKALKPKKRKNISQDTFGTTFGRIHMQKQDLSKLQ-TRKMKGLKKRPAE----NGV 301

Query: 303 DGPAPKKSK 312
           D    KKSK
Sbjct: 306 DDQG-KKSK 301

[Close]

BLAST of Moc05g30570 vs. ExPASy TrEMBL
Match: A0A6J1CTA1 (Ribosome production factor 2 homolog OS=Momordica charantia OX=3673 GN=LOC111014381 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.1e-170
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVK ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKXERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
           STDGPAPKKSKEDSE
Sbjct: 301 STDGPAPKKSKEDSE 315

[Close]

BLAST of Moc05g30570 vs. ExPASy TrEMBL
Match: A0A6J1F357 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111441948 PE=3 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.2e-161
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVK+ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. ExPASy TrEMBL
Match: A0A6J1J655 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697 PE=3 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.4e-160
Identity = 292/315 (92.70%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTS VLNAVLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKNDGIKPFESGGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVIGRTYDH IYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLDLFRGEVVENLNL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSG++VPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAIQGKIGRIYIPDQKVG+MAIP+KSKGVK+ERREAKMK+
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKS 300

Query: 301 STDGPAPKKSKEDSE 316
             DGPA KK KEDSE
Sbjct: 301 KDDGPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. ExPASy TrEMBL
Match: A0A6J1KZU6 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498582 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.9e-157
Identity = 285/315 (90.48%), Postives = 304/315 (96.51%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTS VLN VLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+GIKPFE+GGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVI RTYDHHIYDLIEVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLD+FRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSG++VPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAI GKIGRIYIPDQKVG++A+P+KSKGVK+ERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERREAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             D PA KK KEDSE
Sbjct: 301 RDDMPASKKPKEDSE 315

[Close]

BLAST of Moc05g30570 vs. ExPASy TrEMBL
Match: A0A6J1FZZ6 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449459 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.4e-157
Identity = 283/315 (89.84%), Postives = 304/315 (96.51%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTS VLN VLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+GIKPFE+GGD+SLEFFSLKTDCS+IVYGSHSKKRPDNLVI RTYDHHIYDL+EVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLVEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKSMHSF YDKKL+P+VGSKPFITFIGEGFE+VEELKHLKEVLLD+FRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSG++VPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAMKTAKDQAKKKEKNVS DAI GKIGRIYIPDQKVG++A+P+KSKGVK+ER EAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERCEAKMKN 300

Query: 301 STDGPAPKKSKEDSE 316
             +GPA KK KEDSE
Sbjct: 301 RDNGPASKKQKEDSE 315

[Close]

BLAST of Moc05g30570 vs. TAIR 10
Match: AT3G23620.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 454.9 bits (1169), Expect = 5.2e-128
Identity = 225/315 (71.43%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSSVLNAVLTEIYHLKKESAVKY 60
           M+++RTPK GK KR LE RAPKLVETGKKTLILHGTKTS+ L++V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSLIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+N+ I+PFESGG+ SLEFFS KTDCS+ VYGSH+KKRPDNLV+GR YDH +YDLIEVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 121 IENFKSMHSFAYDKKLAPKVGSKPFITFIGEGFESVEELKHLKEVLLDLFRGEVVENLNL 180
           IENFKS+ +F+YDKK AP  G+KPFI FIGEGFE+V ELKHLKEVL DLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGTLVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
            GLDR YVC+AISP KVFLTHCAL+LKKSG++VPRMELVEVGPSMD+V+RR+RLP+D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 241 KEAMKTAKDQAKKKEKNVSVDAIQGKIGRIYIPDQKVGEMAIPNKSKGVKKERREAKMKN 300
           KEAM+T+KD+ KKKEKNV  DA+ GK G+IY+PDQK+ EM + +KSKG K+ER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 301 STDGPAPKKSKEDSE 316
             +  A KK K  SE
Sbjct: 301 KEETVA-KKMKVSSE 314

The following BLAST results are available for this feature:

BLAST of Moc05g30570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144774.1	2.3e-170	99.68	ribosome production factor 2 homolog [Momordica charantia] >XP_022144775.1 ribos...	[more]
KAG6580669.1	9.8e-161	92.70	Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp...	[more]
XP_022934916.1	1.3e-160	92.38	ribosome production factor 2 homolog [Cucurbita moschata] >XP_023527626.1 riboso...	[more]
XP_022983029.1	2.9e-160	92.70	ribosome production factor 2 homolog [Cucurbita maxima]	[more]
KAG7017424.1	2.9e-160	92.06	Ribosome production factor 2-like protein [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Moc05g30570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG5	7.4e-127	71.43	Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g2362...	[more]
Q9AWM9	2.2e-123	71.52	Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9H7B2	7.3e-58	45.05	Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2	[more]
Q2YDN6	9.5e-58	44.30	Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1	[more]
Q9JJ80	2.1e-57	44.98	Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2	[more]

BLAST of Moc05g30570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTA1	1.1e-170	99.68	Ribosome production factor 2 homolog OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1F357	6.2e-161	92.38	Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1J655	1.4e-160	92.70	Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697...	[more]
A0A6J1KZU6	1.9e-157	90.48	Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498582...	[more]
A0A6J1FZZ6	5.4e-157	89.84	Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]

BLAST of Moc05g30570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23620.1	5.2e-128	71.43	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 31..232 e-value: 5.3E-37 score: 138.9
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 35..231 e-value: 3.4E-32 score: 112.1
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 28..238 score: 23.127737
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..315
IPR039770	Ribosome biogenesis protein Rpf2	PANTHER	PTHR12728	BRIX DOMAIN CONTAINING PROTEIN	coord: 1..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g30570.1	Moc05g30570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0032774	RNA biosynthetic process
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0019843	rRNA binding