Moc05g30270 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g30270
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSolute carrier family 35 member F2-like
Locationchr5: 22540649 .. 22540948 (-)
RNA-Seq ExpressionMoc05g30270
SyntenyMoc05g30270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCGGCGAACTTCCGGTGCAAATCGAAGAACAAGACGACGAACTCTTCGAGATCGATCTGGAGGCCGTTAACAGCATTGTTCCTCCGCCGCATTGCTCCGATTCTGCTTACACTTTCTTCACCGCCGGCGCCGCCCTTCTCGCCAACTGTTTACTTCCGATCGCCGACGTCTCCAACGCCGTTCCGATGGCCGATTCGGAGCCGACGCGTCTCGAGAAGCTTCTTCTCTTGCCGCCGGGCTTCGGTATTCTGGCATTGATTGATCGATCGGAAATGAAAATAAACAGGGGATGA

mRNA sequence

ATGGCCTCCGGCGAACTTCCGGTGCAAATCGAAGAACAAGACGACGAACTCTTCGAGATCGATCTGGAGGCCGTTAACAGCATTGTTCCTCCGCCGCATTGCTCCGATTCTGCTTACACTTTCTTCACCGCCGGCGCCGCCCTTCTCGCCAACTGTTTACTTCCGATCGCCGACGTCTCCAACGCCGTTCCGATGGCCGATTCGGAGCCGACGCGTCTCGAGAAGCTTCTTCTCTTGCCGCCGGGCTTCGGTATTCTGGCATTGATTGATCGATCGGAAATGAAAATAAACAGGGGATGA

Coding sequence (CDS)

ATGGCCTCCGGCGAACTTCCGGTGCAAATCGAAGAACAAGACGACGAACTCTTCGAGATCGATCTGGAGGCCGTTAACAGCATTGTTCCTCCGCCGCATTGCTCCGATTCTGCTTACACTTTCTTCACCGCCGGCGCCGCCCTTCTCGCCAACTGTTTACTTCCGATCGCCGACGTCTCCAACGCCGTTCCGATGGCCGATTCGGAGCCGACGCGTCTCGAGAAGCTTCTTCTCTTGCCGCCGGGCTTCGGTATTCTGGCATTGATTGATCGATCGGAAATGAAAATAAACAGGGGATGA

Protein sequence

MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
Homology
BLAST of Moc05g30270 vs. NCBI nr
Match: XP_022144767.1 (uncharacterized protein LOC111014377 [Momordica charantia])

HSP 1 Score: 198.4 bits (503), Expect = 3.0e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVS 60
           MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVS
Sbjct: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVS 60

Query: 61  NAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG 100
           NAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
Sbjct: 61  NAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG 99

BLAST of Moc05g30270 vs. NCBI nr
Match: XP_022983162.1 (uncharacterized protein LOC111481795 [Cucurbita maxima])

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25
Identity = 74/114 (64.91%), Postives = 84/114 (73.68%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIAD 60
           MAS  +PV+IEE DDELFEIDLEAVNSI+ P H S+  Y FFTA  GAALLANCLLPI+D
Sbjct: 1   MASSGVPVEIEE-DDELFEIDLEAVNSIISPRHFSEDTYCFFTATGGAALLANCLLPISD 60

Query: 61  VSNAVPMADS------------EPTRLEKLLLLPPGFGI-LALIDRSEMKINRG 100
           +SNAVPMADS            EPTRLEK   LP GFG+  ALI+RSEMK++ G
Sbjct: 61  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 113

BLAST of Moc05g30270 vs. NCBI nr
Match: XP_022935370.1 (uncharacterized protein LOC111442274 [Cucurbita moschata])

HSP 1 Score: 123.6 bits (309), Expect = 9.3e-25
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIAD 60
           MAS  +PV+IEE DDELFEIDLEAVNSI+ P H  +  Y FFTA  GAALLANCLLPI+D
Sbjct: 16  MASSGVPVEIEE-DDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISD 75

Query: 61  VSNAVPMADS------------EPTRLEKLLLLPPGFGI-LALIDRSEMKINRG 100
           +SNAVPMADS            EPTRLEK   LP GFG+  ALI+RSEMK++ G
Sbjct: 76  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 128

BLAST of Moc05g30270 vs. NCBI nr
Match: XP_023529132.1 (uncharacterized protein LOC111791865 [Cucurbita pepo subsp. pepo] >KAG6580690.1 hypothetical protein SDJN03_20692, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017447.1 hypothetical protein SDJN02_19312, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.6 bits (309), Expect = 9.3e-25
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIAD 60
           MAS  +PV+IEE DDELFEIDLEAVNSI+ P H  +  Y FFTA  GAALLANCLLPI+D
Sbjct: 1   MASSGVPVEIEE-DDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISD 60

Query: 61  VSNAVPMADS------------EPTRLEKLLLLPPGFGI-LALIDRSEMKINRG 100
           +SNAVPMADS            EPTRLEK   LP GFG+  ALI+RSEMK++ G
Sbjct: 61  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 113

BLAST of Moc05g30270 vs. NCBI nr
Match: XP_008442832.1 (PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo] >KAA0043891.1 uncharacterized protein E6C27_scaffold236G002270 [Cucumis melo var. makuwa] >TYK25246.1 uncharacterized protein E5676_scaffold352G003790 [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19
Identity = 66/111 (59.46%), Postives = 72/111 (64.86%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIAD 60
           MASG +P    E+DD+LFEIDLEAVNSI  PP+ SD    FFT   GA LLANCLLPI D
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 61  VSNAVPMAD------------SEPTRLEKLLLLPPGFGI-LALIDRSEMKI 97
           VSNAVP+ D            SEPT LEK L LP G G+  ALID  EMKI
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKI 111

BLAST of Moc05g30270 vs. ExPASy TrEMBL
Match: A0A6J1CUM2 (uncharacterized protein LOC111014377 OS=Momordica charantia OX=3673 GN=LOC111014377 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVS 60
           MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVS
Sbjct: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVS 60

Query: 61  NAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG 100
           NAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
Sbjct: 61  NAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG 99

BLAST of Moc05g30270 vs. ExPASy TrEMBL
Match: A0A6J1IYI1 (uncharacterized protein LOC111481795 OS=Cucurbita maxima OX=3661 GN=LOC111481795 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 9.1e-26
Identity = 74/114 (64.91%), Postives = 84/114 (73.68%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIAD 60
           MAS  +PV+IEE DDELFEIDLEAVNSI+ P H S+  Y FFTA  GAALLANCLLPI+D
Sbjct: 1   MASSGVPVEIEE-DDELFEIDLEAVNSIISPRHFSEDTYCFFTATGGAALLANCLLPISD 60

Query: 61  VSNAVPMADS------------EPTRLEKLLLLPPGFGI-LALIDRSEMKINRG 100
           +SNAVPMADS            EPTRLEK   LP GFG+  ALI+RSEMK++ G
Sbjct: 61  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 113

BLAST of Moc05g30270 vs. ExPASy TrEMBL
Match: A0A6J1FAF9 (uncharacterized protein LOC111442274 OS=Cucurbita moschata OX=3662 GN=LOC111442274 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.5e-25
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIAD 60
           MAS  +PV+IEE DDELFEIDLEAVNSI+ P H  +  Y FFTA  GAALLANCLLPI+D
Sbjct: 16  MASSGVPVEIEE-DDELFEIDLEAVNSIISPRHFCEDTYGFFTATGGAALLANCLLPISD 75

Query: 61  VSNAVPMADS------------EPTRLEKLLLLPPGFGI-LALIDRSEMKINRG 100
           +SNAVPMADS            EPTRLEK   LP GFG+  ALI+RSEMK++ G
Sbjct: 76  LSNAVPMADSADFEMFPFATPPEPTRLEKAFQLPLGFGLRQALINRSEMKLSSG 128

BLAST of Moc05g30270 vs. ExPASy TrEMBL
Match: A0A5A7TQP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003790 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.5e-20
Identity = 66/111 (59.46%), Postives = 72/111 (64.86%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIAD 60
           MASG +P    E+DD+LFEIDLEAVNSI  PP+ SD    FFT   GA LLANCLLPI D
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 61  VSNAVPMAD------------SEPTRLEKLLLLPPGFGI-LALIDRSEMKI 97
           VSNAVP+ D            SEPT LEK L LP G G+  ALID  EMKI
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKI 111

BLAST of Moc05g30270 vs. ExPASy TrEMBL
Match: A0A1S3B7E8 (uncharacterized protein LOC103486601 OS=Cucumis melo OX=3656 GN=LOC103486601 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.5e-20
Identity = 66/111 (59.46%), Postives = 72/111 (64.86%), Query Frame = 0

Query: 1   MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIAD 60
           MASG +P    E+DD+LFEIDLEAVNSI  PP+ SD    FFT   GA LLANCLLPI D
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 61  VSNAVPMAD------------SEPTRLEKLLLLPPGFGI-LALIDRSEMKI 97
           VSNAVP+ D            SEPT LEK L LP G G+  ALID  EMKI
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKI 111

BLAST of Moc05g30270 vs. TAIR 10
Match: AT2G36295.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.1e-06
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 11 EEQDDELFEIDLEAV-NSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVP 65
          E+ +D+LFEI+LEAV ++   PP+  D        G+ LLANCLLP A++SNAVP
Sbjct: 33 EDGEDDLFEINLEAVSDTATSPPY--DCQRLPARTGSVLLANCLLPAAEISNAVP 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022144767.13.0e-47100.00uncharacterized protein LOC111014377 [Momordica charantia][more]
XP_022983162.11.9e-2564.91uncharacterized protein LOC111481795 [Cucurbita maxima][more]
XP_022935370.19.3e-2564.04uncharacterized protein LOC111442274 [Cucurbita moschata][more]
XP_023529132.19.3e-2564.04uncharacterized protein LOC111791865 [Cucurbita pepo subsp. pepo] >KAG6580690.1 ... [more]
XP_008442832.11.5e-1959.46PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo] >KAA0043891.1 unc... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CUM21.4e-47100.00uncharacterized protein LOC111014377 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1IYI19.1e-2664.91uncharacterized protein LOC111481795 OS=Cucurbita maxima OX=3661 GN=LOC111481795... [more]
A0A6J1FAF94.5e-2564.04uncharacterized protein LOC111442274 OS=Cucurbita moschata OX=3662 GN=LOC1114422... [more]
A0A5A7TQP67.5e-2059.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B7E87.5e-2059.46uncharacterized protein LOC103486601 OS=Cucumis melo OX=3656 GN=LOC103486601 PE=... [more]
Match NameE-valueIdentityDescription
AT2G36295.12.1e-0650.91unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g30270.1Moc05g30270.1mRNA