Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGACAGATATCAAGCACACCATTATTATGAAGGGGTCCTGAAGTTTAATGAGGAGAATTTCAGTTTTTGGAAGATACAGGTAAAAGATCTTCTTACATGCAAGAAAATACACAAGACTTTAGGGGAGAGACCAGGGATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGCCATTGCCAACATTAGAATGGCGTTATCAATGAATATTTGTAGTTTCGTGGCGAAAGAGACTACAACGAAAGATTTGTTAAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGCTAATACAAAAATACTTCTATGGACAAAGTATATTAATATCCACATGGAGGAGGGAACCTCGATGAATTCCAACATTAATGAACTCACCAATATCTTGAACAAGTTAGAAGGGATGGGTGTCAAGATTGACGATGAGGTGAAAGCTATGAGGCTGTTGACGTCTTTGCCTGATAGTTGGAAGACGATGAAGACCGCGATGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAACTATTTGTGATGCTGCCATATTTGAGGAAGCCTGGAGAAAATTAGGGAAAATGTCTGCATCTACTTCGGGGGCAGAAACCGGGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAAGATGAATTACAATGGGAAACAACAGCAGAGATATAGTAGGAGTAGTGTGAGTTCCAATGGAGAAGTAGAGTGTTATTACTGCCACAAGAAGGGACACGTTAAACGCTTTTTTAGGAAGTTTAAAGAAGATCTTGAAAAGAGGAATACTACTGCAAATGTTGTAAGAAAAGAAGAACAGATTGAGGAGTTTCTAGCTTGTGTTTAGAGGAACATATCTGTAGACCAGTGGGTTGTGGACACTGCAGCATCAGCGTACGTTGCTTCAGATAGACGTTGGTTCTCATCTCTTACTGCAAGTGATTATGGCTCAATGAGGATGGGAATGTGAGTATCTTTAAGGTGAGAGGAATTTGAGATGTTTGTTTGAAGACAGGCGAAGGGGCCGAGTTGGTGCTACAAGGCGTTAGGTATACTCCTAGCTTCAGATTTAATTTGTTATCCGTATGGAAGCTAGATGATGATAGCTACAACAATGAGTTTAGTGAGGGTTGCTGGAAGCTCAGGAGGGAATCCAGGGTGGTGACAACAGGCCACGAAAGATCTTCTGTTTGTGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAAACTATGCATAGAGTAGCTACAGATGGTTCAGAGCGAGACCTCAGAGGACCAGCAACAATGATGGCCAGAACAGATAAGAAGAATCTGCCATCAGCGCAAGTTAAACGGTTGAGAAGTACAGAAAAAGGAAACGAGAATTTGATAGGTCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGACGAGTTGATGAAAGCGCATAGGCGAATTAGTGCATTGTAGGGTACGAGTTCTGTTTCTAGTGTGGCGACAGACTTGGGTAGGAGCGCCAAGTCATAAGGGGAATCTTCCTTCAGAGGTCGTTGGGTTTGATCGAGAAAGGAAGCGATGGGGACTACTTAGATCAAGTGGGAGCACGTGTCTATGTGTCTAAGTCTGGGGGACAAGACCACGTAGAGCTGCCTAGTCTCGGGGCAGAGTCCGACGATGCTTGGGTAGGGCTAAGCAGTATTGATCAGTTCGTTGATGAAGGAGTCAGAACTGTGCCTTGA
mRNA sequence
ATGGGTGACAGATATCAAGCACACCATTATTATGAAGGGGTCCTGAAGTTTAATGAGGAGAATTTCAGTTTTTGGAAGATACAGGTAAAAGATCTTCTTACATGCAAGAAAATACACAAGACTTTAGGGGAGAGACCAGGGATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGCCATTGCCAACATTAGAATGGCGTTATCAATGAATATTTGTAGTTTCGTGGCGAAAGAGACTACAACGAAAGATTTGTTAAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGCTAATACAAAAATACTTCTATGGACAAAGTATATTAATATCCACATGGAGGAGGGAACCTCGATGAATTCCAACATTAATGAACTCACCAATATCTTGAACAAGTTAGAAGGGATGGGTGTCAAGATTGACGATGAGGTGAAAGCTATGAGGCTGTTGACGTCTTTGCCTGATAGTTGGAAGACGATGAAGACCGCGATGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAACTATTTGTGATGCTGCCATATTTGAGGAAGCCTGGAGAAAATTAGGGAAAATGTCTGCATCTACTTCGGGGGCAGAAACCGGGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAAGATGAATTACAATGGGAAACAACAGCAGAGATATAGTAGGAGTAGTGTGAGTTCCAATGGAGAAGTAGAGTGTTATTACTGCCACAAGAAGGGACACGTTAAACGCTTTTTTAGGAAGTTTAAAGAAGATCTTGAAAAGAGGAATACTACTGCAAATGTTTGGGTTGTGGACACTGCAGCATCAGCGTACGTTGCTTCAGATAGACGTTGGTTCTCATCTCTTACTGCAAGCGAAGGGGCCGAGTTGGTGCTACAAGGCGTTAGGTATACTCCTAGCTTCAGATTTAATTTGTTATCCGTATGGAAGCTAGATGATGATAGCTACAACAATGAGTTTAGTGAGGGTTGCTGGAAGCTCAGGAGGGAATCCAGGGTGGTGACAACAGGCCACGAAAGATCTTCTGTTTGTGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAAACTATGCATAGAGTAGCTACAGATGGTTCAGAGCGAGACCTCAGAGGACCAGCAACAATGATGGCCAGAACAGATAAGAAGAATCTGCCATCAGCGCAAGTTAAACGGTTGAGAAGTACAGAAAAAGGAAACGAGAATTTGATAGGTCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGACGAGTTGATGAAAGCGCATAGGCGAATTAGTGCATTGTCGTTGGGTTTGATCGAGAAAGGAAGCGATGGGGACTACTTAGATCAAGTGGGAGCACGTGTCTATGTGTCTAAGTCTGGGGGACAAGACCACGTAGAGCTGCCTAGTCTCGGGGCAGAGTCCGACGATGCTTGGGTAGGGCTAAGCAGTATTGATCAGTTCGTTGATGAAGGAGTCAGAACTGTGCCTTGA
Coding sequence (CDS)
ATGGGTGACAGATATCAAGCACACCATTATTATGAAGGGGTCCTGAAGTTTAATGAGGAGAATTTCAGTTTTTGGAAGATACAGGTAAAAGATCTTCTTACATGCAAGAAAATACACAAGACTTTAGGGGAGAGACCAGGGATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGCCATTGCCAACATTAGAATGGCGTTATCAATGAATATTTGTAGTTTCGTGGCGAAAGAGACTACAACGAAAGATTTGTTAAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGCTAATACAAAAATACTTCTATGGACAAAGTATATTAATATCCACATGGAGGAGGGAACCTCGATGAATTCCAACATTAATGAACTCACCAATATCTTGAACAAGTTAGAAGGGATGGGTGTCAAGATTGACGATGAGGTGAAAGCTATGAGGCTGTTGACGTCTTTGCCTGATAGTTGGAAGACGATGAAGACCGCGATGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAACTATTTGTGATGCTGCCATATTTGAGGAAGCCTGGAGAAAATTAGGGAAAATGTCTGCATCTACTTCGGGGGCAGAAACCGGGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAAGATGAATTACAATGGGAAACAACAGCAGAGATATAGTAGGAGTAGTGTGAGTTCCAATGGAGAAGTAGAGTGTTATTACTGCCACAAGAAGGGACACGTTAAACGCTTTTTTAGGAAGTTTAAAGAAGATCTTGAAAAGAGGAATACTACTGCAAATGTTTGGGTTGTGGACACTGCAGCATCAGCGTACGTTGCTTCAGATAGACGTTGGTTCTCATCTCTTACTGCAAGCGAAGGGGCCGAGTTGGTGCTACAAGGCGTTAGGTATACTCCTAGCTTCAGATTTAATTTGTTATCCGTATGGAAGCTAGATGATGATAGCTACAACAATGAGTTTAGTGAGGGTTGCTGGAAGCTCAGGAGGGAATCCAGGGTGGTGACAACAGGCCACGAAAGATCTTCTGTTTGTGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAAACTATGCATAGAGTAGCTACAGATGGTTCAGAGCGAGACCTCAGAGGACCAGCAACAATGATGGCCAGAACAGATAAGAAGAATCTGCCATCAGCGCAAGTTAAACGGTTGAGAAGTACAGAAAAAGGAAACGAGAATTTGATAGGTCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGACGAGTTGATGAAAGCGCATAGGCGAATTAGTGCATTGTCGTTGGGTTTGATCGAGAAAGGAAGCGATGGGGACTACTTAGATCAAGTGGGAGCACGTGTCTATGTGTCTAAGTCTGGGGGACAAGACCACGTAGAGCTGCCTAGTCTCGGGGCAGAGTCCGACGATGCTTGGGTAGGGCTAAGCAGTATTGATCAGTTCGTTGATGAAGGAGTCAGAACTGTGCCTTGA
Protein sequence
MGDRYQAHHYYEGVLKFNEENFSFWKIQVKDLLTCKKIHKTLGERPGMPDKDWNEMDEQAIANIRMALSMNICSFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKLEGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGKMSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGEVECYYCHKKGHVKRFFRKFKEDLEKRNTTANVWVVDTAASAYVASDRRWFSSLTASEGAELVLQGVRYTPSFRFNLLSVWKLDDDSYNNEFSEGCWKLRRESRVVTTGHERSSVCVSEFGVAKGSLRQTMHRVATDGSERDLRGPATMMARTDKKNLPSAQVKRLRSTEKGNENLIGHRVHTSAVRRSDELMKAHRRISALSLGLIEKGSDGDYLDQVGARVYVSKSGGQDHVELPSLGAESDDAWVGLSSIDQFVDEGVRTVP
Homology
BLAST of Moc05g29940 vs. NCBI nr
Match:
KAG7593230.1 (Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 219.2 bits (557), Expect = 8.3e-53
Identity = 128/371 (34.50%), Postives = 197/371 (53.10%), Query Frame = 0
Query: 13 GVLKFNEENFSFWKIQVKDLLTCKKIHKTLGERP-GMPDKDWNEMDEQAIANIRMALSMN 72
G+ KF+ +F+FW++Q++D L KK+H+ L +P M ++W+ +D Q + IR+ LS N
Sbjct: 10 GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69
Query: 73 ICSFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILN 132
+ VAKE TT+ L+K L D YEKPSAN K+ L K ++ MEEG + +++NE I+N
Sbjct: 70 VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129
Query: 133 KLEGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKL 192
+L + ++ DDEV+A+ LL SLP+SW+ M+ A+SNS+G LKF + D + EE R
Sbjct: 130 QLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNSVGNQKLKFVDVRDRILGEEVRR-- 189
Query: 193 GKMSASTSGAETGVESALVAQNKGKAKMNYN---GKQQQRYSRSSVSSNGEVECYYCHKK 252
ET SA +N+G+ + N G+ + R + S VEC+ C K
Sbjct: 190 ------IDTGETSTSSAFNVENRGRDQNRRNQNRGRSKSRNGKGQSKSRKPVECWNCGKT 249
Query: 253 GHVKRFFRKFKEDLEKRNTTANVWVVDTAASAYVASDRRWFS------------------ 312
GH K K + ++ + WV+D+ AS + DR
Sbjct: 250 GHFKT-VNTTKASISYVDSPIDSWVLDSGASFHTTPDRNIMENYVVGNYGKVYLANGVPL 309
Query: 313 --------SLTASEGAELVLQGVRYTPSFRFNLLSVWKLDDDSYNNEFSEGCWKLRRESR 354
+L S+G + VR+ P NL+SV +LDD +N F +G WK+++ S
Sbjct: 310 DIVGIGDINLKMSDGLVWKITKVRHVPKLMRNLISVGQLDDTGHNVNFGDGAWKVKKGSM 369
BLAST of Moc05g29940 vs. NCBI nr
Match:
KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 204.9 bits (520), Expect = 1.6e-48
Identity = 131/413 (31.72%), Postives = 198/413 (47.94%), Query Frame = 0
Query: 13 GVLKFNEENFSFWKIQVKDLLTCKKIHKTLGERP-GMPDKDWNEMDEQAIANIRMALSMN 72
G+ KF+ +F+FW++Q++D L KK+H+ L +P M ++W+ +D Q + IR+ LS N
Sbjct: 10 GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69
Query: 73 ICSFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILN 132
+ VAKE TT+ L+K L D YEKPSAN K+ L K ++ MEEG + +++NE I+N
Sbjct: 70 VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129
Query: 133 KLEGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKL 192
+L + ++ DDEV+A+ LL SLP+SW+ M+ A+SNS+G LKF + D + EE R
Sbjct: 130 QLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNSVGNQKLKFVDVRDRILGEEVRR-- 189
Query: 193 GKMSASTSGAETGVESALVAQNKGKAKMNYN---GKQQQRYSRSSVSSNGEVECYYCHKK 252
ET + SA +N+G+ + N G+ + R + S VEC+ C K
Sbjct: 190 ------IDTGETSMSSAFNVENRGRDQNRRNQNRGRSKSRNGKGQSKSRKPVECWNCGKT 249
Query: 253 GHVKR----------------------------FFRKFKEDLEKRNTTANV--------- 312
GH K F E +T N
Sbjct: 250 GHFKSNCWAPPKKENNKGGGANAVTDEIADALLVFVDSPRKGETHDTAVNTTKASISYVD 309
Query: 313 -----WVVDTAASAYVASDRRWFSSLTA--------------------------SEGAEL 354
WV+D+ AS + DR + A S+G
Sbjct: 310 SPIDSWVLDSGASFHTTPDRNIMENYVAGNYGKVYLANGVPLDIVGIGDINLKMSDGLVW 369
BLAST of Moc05g29940 vs. NCBI nr
Match:
KAG7561662.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 202.2 bits (513), Expect = 1.0e-47
Identity = 131/413 (31.72%), Postives = 199/413 (48.18%), Query Frame = 0
Query: 13 GVLKFNEENFSFWKIQVKDLLTCKKIHKTLGERP-GMPDKDWNEMDEQAIANIRMALSMN 72
G+ KF+ +F+FW++Q++D L KK+H+ L +P M ++W+ +D Q + IR+ LS N
Sbjct: 10 GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69
Query: 73 ICSFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILN 132
+ VAKE TT+ L+K L D YEKPSAN K+ L K ++ MEEG + +++NE I+N
Sbjct: 70 VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129
Query: 133 KLEGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKL 192
+L + ++ DDEV+A+ L+ SLP+SW+ M+ A+SNS+G LKF + D + EE R
Sbjct: 130 QLSSVEIEFDDEVRALILIASLPNSWEPMRAAVSNSVGNQKLKFVDVRDRILGEEVRR-- 189
Query: 193 GKMSASTSGAETGVESALVAQNKGKAKMNYN---GKQQQRYSRSSVSSNGEVECYYCHKK 252
ET SA +N+G+ + N G+ + R + S VEC+ C K
Sbjct: 190 ------IDTGETSTSSAFNVENRGRDQNRRNQNRGRSKSRNGKGQSKSRKPVECWNCGKT 249
Query: 253 GHVKRFF--------------------------------RKFKEDLEKRNTT-------- 312
GH K RK + NTT
Sbjct: 250 GHFKSNCWAPPKKENNKGGGANAVTDEIADALLVSVDSPRKGETHDTAVNTTKASISYVD 309
Query: 313 --ANVWVVDTAASAYVASDRRWFS--------------------------SLTASEGAEL 354
+ WV+D+ AS + DR +L S+G
Sbjct: 310 SPIDSWVLDSGASFHTTPDRNIMENYVVGNYGKVYLANGVPLDIVGIGDINLKMSDGLVW 369
BLAST of Moc05g29940 vs. NCBI nr
Match:
BBH01979.1 (hypothetical protein Prudu_012406 [Prunus dulcis] >BBH08932.1 hypothetical protein Prudu_021286 [Prunus dulcis] >BBN68993.1 hypothetical protein Prudu_682S000500 [Prunus dulcis] >BBN69151.1 hypothetical protein Prudu_777S000500 [Prunus dulcis])
HSP 1 Score: 200.7 bits (509), Expect = 3.0e-47
Identity = 127/405 (31.36%), Postives = 201/405 (49.63%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 12 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 71
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 72 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 131
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 132 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 191
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 192 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 251
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 252 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 311
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 370
G+ L+ VR+ P R NL+SV +L +
Sbjct: 312 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 371
BLAST of Moc05g29940 vs. NCBI nr
Match:
BBH05460.1 (hypothetical protein Prudu_016848 [Prunus dulcis])
HSP 1 Score: 198.7 bits (504), Expect = 1.2e-46
Identity = 126/403 (31.27%), Postives = 200/403 (49.63%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 12 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 71
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 72 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 131
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 132 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 191
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 192 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 251
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 252 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 311
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 368
G+ L+ VR+ P R NL+SV +L +
Sbjct: 312 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 371
BLAST of Moc05g29940 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 9.9e-33
Identity = 115/428 (26.87%), Postives = 189/428 (44.16%), Query Frame = 0
Query: 14 VLKFNEEN-FSFWKIQVKDLLTCKKIHKTLGERPGMPD----KDWNEMDEQAIANIRMAL 73
V KFN +N FS W+ +++DLL + +HK L PD +DW ++DE+A + IR+ L
Sbjct: 8 VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67
Query: 74 SMNICSFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTN 133
S ++ + + E T + + L+ Y + K+ L + +HM EGT+ S++N
Sbjct: 68 SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127
Query: 134 ILNKLEGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAW 193
++ +L +GVKI++E KA+ LL SLP S+ + T + + G+ +++ + A + E
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKM 187
Query: 194 RKLGKMSASTSGAETGVESALVAQNKGKA---KMNYNGKQQQRYSRSSVSSNGEVECYYC 253
RK + AL+ + +G++ N G+ R + S + CY C
Sbjct: 188 RKKPENQG----------QALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNC 247
Query: 254 HKKGHVKRFF---RKFKEDLEKR----NTTANV-------------------------WV 313
++ GH KR RK K + + NT A V WV
Sbjct: 248 NQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWV 307
Query: 314 VDTAASAYVASDRRWFSSLTASE--------------------------GAELVLQGVRY 373
VDTAAS + R F A + G LVL+ VR+
Sbjct: 308 VDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRH 367
Query: 374 TPSFRFNLLSVWKLDDDSYNNEFSEGCWKLRRESRVVTTGHERSSVCVSEFGVAKGSLRQ 376
P R NL+S LD D Y + F+ W+L + S V+ G R ++ + + +G L
Sbjct: 368 VPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNA 423
BLAST of Moc05g29940 vs. ExPASy TrEMBL
Match:
A0A4Y1RCM7 (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012406 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 1.5e-47
Identity = 127/405 (31.36%), Postives = 201/405 (49.63%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 12 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 71
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 72 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 131
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 132 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 191
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 192 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 251
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 252 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 311
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 370
G+ L+ VR+ P R NL+SV +L +
Sbjct: 312 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 371
BLAST of Moc05g29940 vs. ExPASy TrEMBL
Match:
A0A4Y1R0B6 (Disease resistance family protein / LRR family protein OS=Prunus dulcis OX=3755 GN=Prudu_006709 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 5.6e-47
Identity = 126/403 (31.27%), Postives = 200/403 (49.63%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 557 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 616
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 617 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 676
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 677 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 736
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 737 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 796
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 797 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 856
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 368
G+ L+ VR+ P R NL+SV +L +
Sbjct: 857 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 916
BLAST of Moc05g29940 vs. ExPASy TrEMBL
Match:
A0A4Y1RMK2 (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_016848 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 5.6e-47
Identity = 126/403 (31.27%), Postives = 200/403 (49.63%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 12 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 71
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 72 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 131
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 132 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 191
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 192 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 251
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 252 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 311
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 368
G+ L+ VR+ P R NL+SV +L +
Sbjct: 312 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 371
BLAST of Moc05g29940 vs. ExPASy TrEMBL
Match:
A0A4Y1R3K4 (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_008085 PE=4 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 2.8e-46
Identity = 124/395 (31.39%), Postives = 196/395 (49.62%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 12 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 71
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 72 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 131
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 132 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 191
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 192 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 251
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 252 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 311
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 360
G+ L+ VR+ P R NL+SV +L +
Sbjct: 312 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 371
BLAST of Moc05g29940 vs. ExPASy TrEMBL
Match:
A0A5H2XHJ5 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_208S000900 PE=4 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 2.8e-46
Identity = 124/395 (31.39%), Postives = 196/395 (49.62%), Query Frame = 0
Query: 16 KFNEENFSFWKIQVKDLLTCKKIHKTLGER--PGMPDKDWNEMDEQAIANIRMALSMNIC 75
KF+ +F FWK+Q++D L KK+++ L E GM D+DW +D QA+ IR+ LS N+
Sbjct: 12 KFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVA 71
Query: 76 SFVAKETTTKDLLKALQDRYEKPSANTKILLWTKYINIHMEEGTSMNSNINELTNILNKL 135
+AKE TT L+ AL YEKPSA+ K+ L + N+ M EG S+ ++NEL + +L
Sbjct: 72 FNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQL 131
Query: 136 EGMGVKIDDEVKAMRLLTSLPDSWKTMKTAMSNSLGENSLKFTTICDAAIFEEAWRKLGK 195
+G++ D+EV+A+ LL+SLP+SW TA+S+S G N L F + D + EE R+
Sbjct: 132 SSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRRESG 191
Query: 196 MSASTSGAETGVESALVAQNKGKAKMNYNGKQQQRYSRSSVSSNGE----VECYYCHKKG 255
S+++S T + G+ + NY G+ + R S+S +N VEC+ C K G
Sbjct: 192 ESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIG 251
Query: 256 HVKRFFRKFKEDLEKRNTTANV--------------------WVVDTAASAYVASDRRWF 315
H K + +D E + ANV WV+D+ AS + S +++F
Sbjct: 252 HYKNQCKSASKDHEAK-AEANVTSTSGGDDALICSLESNEESWVLDSGASFHATSQKQFF 311
Query: 316 SSLTAS-------------------------EGAELVLQGVRYTPSFRFNLLSVWKLDDD 360
G+ L+ VR+ P R NL+SV +L +
Sbjct: 312 ERYVPGNLGKVYLGNDQPCAIIGKGVVKIKLNGSVWELKDVRHIPDLRKNLISVGQLASE 371
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7593230.1 | 8.3e-53 | 34.50 | Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
KAG7584790.1 | 1.6e-48 | 31.72 | Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
KAG7561662.1 | 1.0e-47 | 31.72 | Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
BBH01979.1 | 3.0e-47 | 31.36 | hypothetical protein Prudu_012406 [Prunus dulcis] >BBH08932.1 hypothetical prote... | [more] |
BBH05460.1 | 1.2e-46 | 31.27 | hypothetical protein Prudu_016848 [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 9.9e-33 | 26.87 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A4Y1RCM7 | 1.5e-47 | 31.36 | CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012406 PE=... | [more] |
A0A4Y1R0B6 | 5.6e-47 | 31.27 | Disease resistance family protein / LRR family protein OS=Prunus dulcis OX=3755 ... | [more] |
A0A4Y1RMK2 | 5.6e-47 | 31.27 | CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_016848 PE=... | [more] |
A0A4Y1R3K4 | 2.8e-46 | 31.39 | CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_008085 PE=... | [more] |
A0A5H2XHJ5 | 2.8e-46 | 31.39 | Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_208S000900 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |