![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Moc05g29780 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCGGAGAAGCAATGGAAGTAGTGGTCCGAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACACCCACTGGTGGAATCGCCGAGCCGGTCGGCGACGGTATCGCCGACATCGCCGCCGAGCTCGTGTGTGTCGTCGGAGCTAAATCAGGAGGAGGGCGGCGGCGCGGCGGCGCTCCGGTACTCGAGCAGCCCCGAGGCGACGTCGATGGTGCTGGTGGGCTGCCCGCGGTGCCTCATGTACGTGATGCTGTCGGAAAGTGACCCAAAATGCCCCAAATGCAAGAGCTCTGTTCTGCTTGATTTCCTCCACGATAGCACCGCCGCCGCCGCCGCATCTCCGCCGTCCACGGCCACCGCCAGGAAGATCTAG ATGAGTCGGAGAAGCAATGGAAGTAGTGGTCCGAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACACCCACTGGTGGAATCGCCGAGCCGGTCGGCGACGGTATCGCCGACATCGCCGCCGAGCTCGTGTGTGTCGTCGGAGCTAAATCAGGAGGAGGGCGGCGGCGCGGCGGCGCTCCGGTACTCGAGCAGCCCCGAGGCGACGTCGATGGTGCTGGTGGGCTGCCCGCGGTGCCTCATGTACGTGATGCTGTCGGAAAGTGACCCAAAATGCCCCAAATGCAAGAGCTCTGTTCTGCTTGATTTCCTCCACGATAGCACCGCCGCCGCCGCCGCATCTCCGCCGTCCACGGCCACCGCCAGGAAGATCTAG ATGAGTCGGAGAAGCAATGGAAGTAGTGGTCCGAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACACCCACTGGTGGAATCGCCGAGCCGGTCGGCGACGGTATCGCCGACATCGCCGCCGAGCTCGTGTGTGTCGTCGGAGCTAAATCAGGAGGAGGGCGGCGGCGCGGCGGCGCTCCGGTACTCGAGCAGCCCCGAGGCGACGTCGATGGTGCTGGTGGGCTGCCCGCGGTGCCTCATGTACGTGATGCTGTCGGAAAGTGACCCAAAATGCCCCAAATGCAAGAGCTCTGTTCTGCTTGATTTCCTCCACGATAGCACCGCCGCCGCCGCCGCATCTCCGCCGTCCACGGCCACCGCCAGGAAGATCTAG MSRRSNGSSGPKLELKLNLSPPRPHPLVESPSRSATVSPTSPPSSCVSSELNQEEGGGAAALRYSSSPEATSMVLVGCPRCLMYVMLSESDPKCPKCKSSVLLDFLHDSTAAAAASPPSTATARKI Homology
BLAST of Moc05g29780 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 198.0 bits (502), Expect = 4.9e-47 Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of Moc05g29780 vs. NCBI nr
Match: XP_031737841.1 (uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical protein Csa_000798 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46 Identity = 107/126 (84.92%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Moc05g29780 vs. NCBI nr
Match: XP_038905681.1 (uncharacterized protein LOC120091651 [Benincasa hispida]) HSP 1 Score: 194.5 bits (493), Expect = 5.5e-46 Identity = 106/126 (84.13%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Moc05g29780 vs. NCBI nr
Match: XP_023005134.1 (uncharacterized protein LOC111498264 [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 4.6e-45 Identity = 106/126 (84.13%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of Moc05g29780 vs. NCBI nr
Match: KAG6596596.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028133.1 hypothetical protein SDJN02_09313, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.7 bits (478), Expect = 3.0e-44 Identity = 105/126 (83.33%), Postives = 109/126 (86.51%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 4.1e-36 Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 9.4e-25 Identity = 72/129 (55.81%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.0e-10 Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47 Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47 Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 7.0e-47 Identity = 107/126 (84.92%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy TrEMBL
Match: A0A6J1KYB2 (uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.2e-45 Identity = 106/126 (84.13%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of Moc05g29780 vs. ExPASy TrEMBL
Match: A0A6J1H2T2 (uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC111459550 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 5.5e-44 Identity = 104/126 (82.54%), Postives = 109/126 (86.51%), Query Frame = 0
BLAST of Moc05g29780 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 152.1 bits (383), Expect = 2.9e-37 Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 0
BLAST of Moc05g29780 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 114.4 bits (285), Expect = 6.7e-26 Identity = 72/129 (55.81%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Moc05g29780 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.6e-11 Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Moc05g29780 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05 Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|