Moc05g28770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g28770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L21, putative, expressed
Location	chr5: 21222177 .. 21225101 (-)
RNA-Seq Expression	Moc05g28770
Synteny	Moc05g28770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGCCGGCCATGGACTTAGGTCTCGTACCAGAGATCTCTTCGCGAGGCCCTTCAGGAAGAAGGGTTACATTGCTCTCACCACATACCTCAGGACCTACAAGATCGGCGACTATGTCGACATCAAGGTTAACGGCGCCGTTCACAAAGGTATGCCTCACAAGTTCTACCATGGCCGTACCGGTCGTGTATGGAACGTCACCAAGCGCGCCATCGGTGTCGAGATCAACAAGCAGGTTTTGCTTCGCCTCCTCTCCTTACTGATTGATTTTGTTTGCGGTTGTTTTATCAGATCCGTTTTGGTTCGTAGCATCTTTTTTTTCTTTTTTGTTTTCAATCTGCTTCGATTTTTGGAATGTCTATGAATTTGACTGTTTAGGACGTGGATTGTGTTTGATTTTTATGACGACTCGTTTAGTTATAGGATGGAATGTGAAGTTATCGATTCTGTTCGGATTGTATGTCTCTGGCTGCTGTTTTTATTCTGAGCATGTTGAACTTATTCTGCTAATTTCTCTAGCAATTCATTTGGTGGCTGTTTGTTGAACTTTGTGTGTAGTTTTTGATGGCCAAACCACTATATTTTTGTTTGATGTAGCTGGAAATTCATACGATGCTCTACTTGTATGCGAATCATCGCCTATCTCACATCTTTGTAACCTTATGAGCCACCTGTGACTTGGTTGAGCATGTTCTTGGTTAGGTTTAGTTTAGTTTCTGACCTAATCCAAAACCAAGCTCGACTGTGTTTTTAAAACAAAATATACACCATTCAGTTCTGGTATCTGTTTATCAAACTTTTAAATGATCTGTGTGAATTTTCAGGTGGGTAACAGGATAATTAAGAAGAGGATCCATGTCCGTGTTGAGCACGTGCAGCCGTCTCGATGCACCGAGGATTTCCGAATGAGGAAGGTGAACAATGATGCACTCAAGGCTGATGCCAAGGCTAGAGGTGAAGTCATTAGTACCAAGAGGCAACCAGAAGGCCCCAAGCCAGGGTTCATGGTTGAAGGTGCAACAATGGAGACTGTCACCCCCATTCCATACGATGTCGTCAATGATCTCAAGGGTGGTTATTAGAATTTTCTCTTCTCTGAACTTGTCTTGTTTGGTTCTTTTTGGTTTGTCTTTGAACTTATTGGATAGTGTTACAATTTTCTCCTTAAGCTCCTAAATTTTGTTGCATACCAAACCTATCTATTGATGAATTGTTTCTTAGTTTCTGGTTTCGGCCATAACCTTGAGAAAAACTAGTGTAGTTTCAGCTTATTGAAAGTATTTTGTTAGTTTATGCTTTCTCTAATGTTTCTTTTTGCATTCACCCGTAGCTTCTGAATTTGAAAATGCATATGATAAAAAGTTGGAGCTGCATTTTATAATAATGGGCTTTAAAATTTTCCTATGTTGACTCAAATTTGTTCGAAAAAGATTCTATTTGATGTTATTTTTTAGCTATAGTGTTTTGAAAATTTGTTTCTATGATTTTGACTAAAATTTTAGAAAGGTGTGATACAAATCGAACAAAGTAAAACAGGTTCTAAAATTTTGATTGTAGAGAGTTTTAAACAAGATTGTTATTGGGAATTTGCTTTTTCATTTTTTGAATTTAGTTTTACAATTTTAGACTAAATTTTAGAACGAATGGATTTTTTTTCATTTCAAAATTATGGGGTTGCTTGAGTGTGCAATTGATGATAATGGTTTATGAAGATTTGAATATTGTATGTTTAAAATATTTATTCTGGCCTGTGTATTGTCAACTTTTTATGACTGTTTTTAAAACAGTCATTTTGCCCTCCATATTTAAGAAAGTTCATTTCATTTTTTCCAATCACAACACATTTTGAGTTACAATGGATATGCAATCTGTGTTAAAATTTATAAAAAATGTACTTAAATGTCACTTTAAAACTAAATTTATCTATAGTACCTGGATGAAATTTGAATCAAAGTTCTAAAAGTATAGATTAAAATAGTAGTATTATGCATGTGAGTATTGATTTGATTACTATCGCAGACGTTGTCAGTTTATAAGTATGTTTTAGGATGTTAATTTTTGGATAAATTTATTTTTAATCGCTTGTTTTTGTTAAAGTATATTGTCATTATTATTAATGTATGAAAATAAAGGCTAATGAGTATATGGCCCTATTTAATATTGTTTTCAAAAACTTATTCAAGTCCAAATTTTGGACGATTATTACAGTAAATCCTAATTCATGTGAAAGTTAACTTTTTTTTGAATTTTTAAAAAATCATTTCAATGAATGAAATCCTAAATTTTATTCTTTACCACTCCTTTTTCACCTGAAGCATTTTAAGGGTGAGGAACCAAAGTAGAATTTAAGAAGTTAAGATCAAAATAAACTCAATAGAGGAAGCAAGATAGAATTTTAACTTATTTATAAACAATCAATGAAAAAAATGCAAATGAAATAATTAACTTGGAAAAAAATCTAAAATAATTATGTTTGAAATTAGAAACAATCTAGAAAATTGTTGAATTCAACGAAATAGGCCAATTTAGAAAAATTTAAAATTTTAATAGACTATCCAAAATTTAAAATTTCAATGTCACATATTACCTTCCCTCATTCTCATTCTTATTGATTTAAAAAAAAGGTGAGTAAATAAGAAAAGATTAAAAAACACATTTGATCCATAAATTTTCGTAAAAGTAACGATTTAGTCCCTGAATTTTCAAAAGTAATGATTAGTCCATGTACTTTAAAAACTGGGTTAGATTTAATAGAAATTTGATGTGGCATGTTCATGTGTACAAATTTATTATCCAAGTGTACAGTTGGTTCAATATTGGGTCGGTTCAAAGTTAAATCGGTTTTCACGGCTTATTACGCTCCACGCCATCTTGAACCTACTCACAAACTCATCCGAGCCCAAATTGTTCTTCAGGTCCTTAA

mRNA sequence

ATGCCGGCCGGCCATGGACTTAGGTCTCGTACCAGAGATCTCTTCGCGAGGCCCTTCAGGAAGAAGGGTTACATTGCTCTCACCACATACCTCAGGACCTACAAGATCGGCGACTATGTCGACATCAAGGTTAACGGCGCCGTTCACAAAGGTATGCCTCACAAGTTCTACCATGGCCGTACCGGTCGTGTATGGAACGTCACCAAGCGCGCCATCGGTGTCGAGATCAACAAGCAGGTGGGTAACAGGATAATTAAGAAGAGGATCCATGTCCGTGTTGAGCACGTGCAGCCGTCTCGATGCACCGAGGATTTCCGAATGAGGAAGGTGAACAATGATGCACTCAAGGCTGATGCCAAGGCTAGAGGTGAAGTCATTAGTACCAAGAGGCAACCAGAAGGCCCCAAGCCAGGGTTCATGGTTGAAGGTGCAACAATGGAGACTGTCACCCCCATTCCATACGATGTCGTCAATGATCTCAAGGGTCCTTAA

Coding sequence (CDS)

ATGCCGGCCGGCCATGGACTTAGGTCTCGTACCAGAGATCTCTTCGCGAGGCCCTTCAGGAAGAAGGGTTACATTGCTCTCACCACATACCTCAGGACCTACAAGATCGGCGACTATGTCGACATCAAGGTTAACGGCGCCGTTCACAAAGGTATGCCTCACAAGTTCTACCATGGCCGTACCGGTCGTGTATGGAACGTCACCAAGCGCGCCATCGGTGTCGAGATCAACAAGCAGGTGGGTAACAGGATAATTAAGAAGAGGATCCATGTCCGTGTTGAGCACGTGCAGCCGTCTCGATGCACCGAGGATTTCCGAATGAGGAAGGTGAACAATGATGCACTCAAGGCTGATGCCAAGGCTAGAGGTGAAGTCATTAGTACCAAGAGGCAACCAGAAGGCCCCAAGCCAGGGTTCATGGTTGAAGGTGCAACAATGGAGACTGTCACCCCCATTCCATACGATGTCGTCAATGATCTCAAGGGTCCTTAA

Protein sequence

MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAKARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKGP

Homology

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BLAST of Moc05g28770 vs. NCBI nr
Match: XP_022151455.1 (60S ribosomal protein L21-2 [Momordica charantia])

HSP 1 Score: 334.0 bits (855), Expect = 7.5e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. NCBI nr
Match: XP_040384293.1 (60S ribosomal protein L21-2 [Oryza brachyantha])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGD+VD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDHVDVKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTE+FR+RK+ ND LKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. NCBI nr
Match: XP_038906379.1 (60S ribosomal protein L21-1 [Benincasa hispida])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 154/162 (95.06%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTE+FR+RKV ND LKA+AK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           A+GEVI TKRQPEGPKPGFMVEGA METVTPIPYDVVNDLKG
Sbjct: 121 AKGEVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. NCBI nr
Match: XP_015632757.1 (60S ribosomal protein L21-2 [Oryza sativa Japonica Group] >EAY88484.1 hypothetical protein OsI_09955 [Oryza sativa Indica Group] >ABF93903.1 60S ribosomal protein L21, putative, expressed [Oryza sativa Japonica Group] >EAZ25530.1 hypothetical protein OsJ_09354 [Oryza sativa Japonica Group] >KAF2937211.1 hypothetical protein DAI22_03g033600 [Oryza sativa Japonica Group] >BAH91988.1 Os03g0141000 [Oryza sativa Japonica Group])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 151/162 (93.21%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTE+ R+RK+ ND LKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. NCBI nr
Match: RWR95953.1 (60S ribosomal protein L21-1 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 318.2 bits (814), Expect = 4.2e-83
Identity = 152/162 (93.83%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLF+RPFRKKGYI+LTTYLRTY+IGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFSRPFRKKGYISLTTYLRTYRIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRC ED R+RKV ND LKA+AK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCAEDLRLRKVKNDKLKAEAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. ExPASy Swiss-Prot
Match: Q9FDZ9 (60S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.4e-81
Identity = 137/162 (84.57%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC E+F++RK  ND LKADAK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGE ISTKRQP+GPKPGFMVEG T+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. ExPASy Swiss-Prot
Match: Q43291 (60S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-79
Identity = 135/162 (83.33%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC E+F++RK  ND LKA AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           A GE ISTKRQP+GPKPGFMVEG T+ETVTPIPYDVVNDLKG
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKG 162

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BLAST of Moc05g28770 vs. ExPASy Swiss-Prot
Match: O82574 (60S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.8e-42
Identity = 91/158 (57.59%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MP  +G R+RTR LFAR F+  G + L+TYL  +KIG+YVD+  N AVHKGMP K+YHGR
Sbjct: 1   MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + F  R   ND +K DA 
Sbjct: 61  TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120

Query: 121 -ARGEVISTKRQPEGPKPGFMV--EGATMETVTPIPYD 156
            A+  V STKR P  PK G ++  +G   ET   IPY+
Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158

[Close]

BLAST of Moc05g28770 vs. ExPASy Swiss-Prot
Match: Q02753 (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21A PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.4e-42
Identity = 82/157 (52.23%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           M   HG RSRTR +F R FRK G + L+TYL+ YK+GD VDIK NG++ KGMPHKFY G+
Sbjct: 1   MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C ++F  R   N A +A+AK
Sbjct: 61  TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMV--EGATMETVTPIPYD 156
           A+G  +  KRQP  P+   +V  EG   +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157

[Close]

BLAST of Moc05g28770 vs. ExPASy Swiss-Prot
Match: Q54X53 (60S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-41
Identity = 86/159 (54.09%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MP   GLR+RTR LF+R FR  G +  TT+LRT+++GDYVDIK  G VHKGMPHKFYHGR
Sbjct: 1   MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVT RA+GV INK+VG RII K+IHVR EHV+PS        R   N     +AK
Sbjct: 61  TGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATME--TVTPIPYDVV 158
             G+ +  +R P  PK GF V     E   V P+ Y+++
Sbjct: 121 KAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159

[Close]

BLAST of Moc05g28770 vs. ExPASy TrEMBL
Match: A0A6J1DB74 (60S ribosomal protein L21-2 OS=Momordica charantia OX=3673 GN=LOC111019384 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.6e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. ExPASy TrEMBL
Match: J3N389 (Uncharacterized protein OS=Oryza brachyantha OX=4533 GN=102715515 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.4e-84
Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGD+VD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDHVDVKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTE+FR+RK+ ND LKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. ExPASy TrEMBL
Match: A0A0D9XKE3 (Uncharacterized protein OS=Leersia perrieri OX=77586 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84
Identity = 152/162 (93.83%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTE+ R+RK+ ND LKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. ExPASy TrEMBL
Match: A3ADZ1 (Os03g0141000 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0141000 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 151/162 (93.21%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTE+ R+RK+ ND LKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. ExPASy TrEMBL
Match: A0A0D3FDM4 (Uncharacterized protein OS=Oryza barthii OX=65489 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 151/162 (93.21%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTE+ R+RK+ ND LKADAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGEVISTKRQPEGPKPGFMVEGAT+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. TAIR 10
Match: AT1G57660.1 (Translation protein SH3-like family protein )

HSP 1 Score: 301.6 bits (771), Expect = 3.8e-82
Identity = 137/162 (84.57%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC E+F++RK  ND LKADAK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGE ISTKRQP+GPKPGFMVEG T+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. TAIR 10
Match: AT1G57860.1 (Translation protein SH3-like family protein )

HSP 1 Score: 301.6 bits (771), Expect = 3.8e-82
Identity = 137/162 (84.57%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC E+F++RK  ND LKADAK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           ARGE ISTKRQP+GPKPGFMVEG T+ETVTPIPYDVVNDLKG
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. TAIR 10
Match: AT1G09590.1 (Translation protein SH3-like family protein )

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-80
Identity = 135/162 (83.33%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC E+F++RK  ND LKA AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           A GE ISTKRQP+GPKPGFMVEG T+ETVTPIPYDVVNDLKG
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKG 162

[Close]

BLAST of Moc05g28770 vs. TAIR 10
Match: AT1G09690.1 (Translation protein SH3-like family protein )

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-80
Identity = 135/162 (83.33%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEDFRMRKVNNDALKADAK 120
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC E+F++RK  ND LKA AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120

Query: 121 ARGEVISTKRQPEGPKPGFMVEGATMETVTPIPYDVVNDLKG 163
           A GE ISTKRQP+GPKPGFMVEG T+ETVTPIPYDVVNDLKG
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKG 162

The following BLAST results are available for this feature:

BLAST of Moc05g28770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151455.1	7.5e-88	100.00	60S ribosomal protein L21-2 [Momordica charantia]	[more]
XP_040384293.1	1.1e-83	93.83	60S ribosomal protein L21-2 [Oryza brachyantha]	[more]
XP_038906379.1	1.1e-83	95.06	60S ribosomal protein L21-1 [Benincasa hispida]	[more]
XP_015632757.1	3.3e-83	93.21	60S ribosomal protein L21-2 [Oryza sativa Japonica Group] >EAY88484.1 hypothetic...	[more]
RWR95953.1	4.2e-83	93.83	60S ribosomal protein L21-1 [Cinnamomum micranthum f. kanehirae]	[more]

BLAST of Moc05g28770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDZ9	5.4e-81	84.57	60S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1	[more]
Q43291	2.3e-79	83.33	60S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2	[more]
O82574	3.8e-42	57.59	60S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1	[more]
Q02753	6.4e-42	52.23	60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]
Q54X53	1.1e-41	54.09	60S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=...	[more]

BLAST of Moc05g28770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DB74	3.6e-88	100.00	60S ribosomal protein L21-2 OS=Momordica charantia OX=3673 GN=LOC111019384 PE=3 ...	[more]
J3N389	5.4e-84	93.83	Uncharacterized protein OS=Oryza brachyantha OX=4533 GN=102715515 PE=3 SV=1	[more]
A0A0D9XKE3	7.1e-84	93.83	Uncharacterized protein OS=Leersia perrieri OX=77586 PE=3 SV=1	[more]
A3ADZ1	1.6e-83	93.21	Os03g0141000 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0141000 PE...	[more]
A0A0D3FDM4	1.6e-83	93.21	Uncharacterized protein OS=Oryza barthii OX=65489 PE=3 SV=1	[more]

BLAST of Moc05g28770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G57660.1	3.8e-82	84.57	Translation protein SH3-like family protein	[more]
AT1G57860.1	3.8e-82	84.57	Translation protein SH3-like family protein	[more]
AT1G09590.1	1.6e-80	83.33	Translation protein SH3-like family protein	[more]
AT1G09690.1	1.6e-80	83.33	Translation protein SH3-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.250.3260		coord: 99..156 e-value: 1.0E-22 score: 81.9
None	No IPR available	PANTHER	PTHR20981:SF21	60S RIBOSOMAL PROTEIN L21	coord: 1..162
IPR036948	Ribosomal protein L21 superfamily	GENE3D	2.30.30.70	Ribosomal protein L21	coord: 1..97 e-value: 2.0E-46 score: 158.0
IPR001147	Ribosomal protein L21e	PFAM	PF01157	Ribosomal_L21e	coord: 1..101 e-value: 3.6E-46 score: 155.1
IPR001147	Ribosomal protein L21e	PANTHER	PTHR20981	60S RIBOSOMAL PROTEIN L21	coord: 1..162
IPR018259	Ribosomal protein L21e, conserved site	PROSITE	PS01171	RIBOSOMAL_L21E	coord: 37..62
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 3..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g28770.1	Moc05g28770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome