Moc05g28530 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g28530
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Growth-regulating factor
Location	chr5: 21028211 .. 21030780 (-)
RNA-Seq Expression	Moc05g28530
Synteny	Moc05g28530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATCAGGAAACGCCAGCTCTCATTACCCTTCTCCTCTCTCCCTCTTTCCTCAGATTCAGATCCCCTCCCCCCGGTGCAACTCCCATGCGCCGCCCCCCACGGCGACGATCCATCTCCCCCGCCGCCCCACCACAACACTGCTCCCGTAAGTCCAATCAAATACTCCTCCTCTTGCTTTGCTTTTTGTTTCCCCCATCATCTTGATTTCCGATTTTGCTTAATTTATTTCACTGCCTTCTTCAAAACTGCACTCGCCAAACAAACACAAAAAACAACTTTCATTTTCTTTTTTCCTTCTCTTTTTTCTATGTGTGTTTCGCTGCAAATTCGGAGGATAATCGGGAGAACAAATCCCGAAATACAAATGTCTCTCATGGGGGTTGTGGGATTTTGATTTTGAAATTCTTGTTTTCGTTTGTTTTTTTGAAGAAGTTGCCGATGACATTGGAAGAAGTCGATGGTGATGAGGAAGAAACCAGGTAAGAACTAACTACAACAACAAAACGAAAACCCCCCCAAATTAATTTCTGTTCGTTCTCGATTTCTTTCTCATTAATCTCCATGAAAAAAAAAATAGTCAAAAAGTGAAAACCCCCCACCAAAAAAAAAAAACTCTTATGTATTATATTCCTTTATTTTTTATAATGAGTAGCCAATAAGAATAGCGGAAAAAAACCGCAAGTGGAAACACTGTTTTGATGATTTTATATATCTTTCTTTCATCGGCTTTTGGTTTTGGCCTCTTTGTATTGGGGTGCATGTTCGCTGGTCCACCGCTCTACCTCCTCCATTCTCTCTCTCTCCCCCTCACTTCAGCTAAATTATTATGCATTATTCATTTTCAAGAATAATTCCATAATATTTTCCAATCTTATATTATCTGTGGATATGTATATTTGTGGACTCTGCAATGTTTTTGGATTTCGTTTTTAGGGAGATCGCAAGAGTGTTTGGTGCAGAAACTAGCTATGGCGTTGTCCCTCAACAATCCACCTCTTCCCCTCCAGGTCAGATTATTAAAATCCTTCATCCATTTGCCTGTTTTGGCATTTCATTTGATGCACACCCAAATCGAATCATCATTGTTTTCTAGCTGTTTAATGAGTATAATGAGTGGTGCAAATTTGCTGACTAAAAATTAGCCCGTTGTTGACCATGGGAGAGTGGAATGAAATGATTATCATTATAAGATATAGTTTATAATCTTCGTGTGTATTATTTTCATGCTGTTCGAGTAGAAACCAGTTTGTTAATATTATCGTTTTGAGACATATTTGCTTATGTTATATCTCTCACTACTTTCCTACAGTGGTGTAACTTGACCCAAAAGTATTAAAGGGTTTGAATATAAGATCTAATTCTTTGATAGTGTTTTAAACCTGTTAAATTTTTGAAAAGCTTAAACTATGAATAGGGTTTGCATATAAGAACTTATTCTTTGATAGTGTTTTAAACTTGTTAAATTTTCGAAAAGTTTAGACTATGAATTTATTCATATTTAGATATTTAATACATGAATGGGTTCGAATCTTATAATAGCCACCTACTCAAGAATTAATTCTTATATATTTCTCGACATTAAATGCTGTAGAGTCAAATCGATGTCCCGTGAGATTAGTTGAATGTGTGGTGAACTGACCCAAATATGTGAGAAAAAAAGATCTAATTCATTGGAGATAAATTTTGTTAGTATGTTAGAGACCAATCAGTTAATCAAAACGAAGCAAAACCATTATCATTTTGAGACATATTTGCTTGTCTTATATCTCTCCATTTTCATACAGTGGTGTAACTTGACTTAAAAATTTAAATCGATAGATTCGACGTCTTACTTTGATATAATTTTAAACATCATATTAAATCATCTATAAATTTAATATAATCTAAATATTAAAGAAGAATTAAAATAAATTTAATCATATATAAATATCGGAGATAAATTTATCAGGATATATGTTTACTTTTGTAGGAGTGGTGGGGAAGTGGTGCGAGAGGGAGAAGGCATTTCCATTAAAGAAGAGACGAGGGAGCTTCGAGAGGCCAACGGAATTAGATGACAACAAAGAAGAAATCACGACGGCCAACTCGCCGGAGATGATAATCAACAAGAACAACATGAAGGCGACGAAGATGAACAAGAAATACGCCACCACGTCATCGCCGCCGCAGCAGAAGCAAGAACCCGAGGAATCCAAGGTGGGTCCGGAGCTCGCCGTCGCCGGGAAGAAGCGGTCGAGAGGCGGCGCGTTAATGGAGGGATCTCGGTGCAGCCGCGTCAACGGCAGAGGATGGCGCTGCTGCCAGCAGACGCTCGTCGGCTACTCCCTCTGCGAACATCACTTGGGAAAAGGACGCCTCCGCAGCATCAATACCGTCCGCCGCCGCTCCGCCGCCGCGCCCAAGAAGGAGCAGCCCCTCCCGCCGCCGCCGTTGACGCCGGCCAGTAAGAAGAGATCAGTGAAGCTGGGTGTGGTCAAAGCCAGGTCCATAAGTAGCTTGCTCGGTCAAACTGACAACGTCATGGCGGCGCCGCTGTATCCGCTGCCTCATGACGACGACGTATAA

mRNA sequence

ATGAGGATCAGGAAACGCCAGCTCTCATTACCCTTCTCCTCTCTCCCTCTTTCCTCAGATTCAGATCCCCTCCCCCCGGTGCAACTCCCATGCGCCGCCCCCCACGGCGACGATCCATCTCCCCCGCCGCCCCACCACAACACTGCTCCCAAGTTGCCGATGACATTGGAAGAAGTCGATGGTGATGAGGAAGAAACCAGGGAGATCGCAAGAGTGTTTGGTGCAGAAACTAGCTATGGCGTTGTCCCTCAACAATCCACCTCTTCCCCTCCAGGAGTGGTGGGGAAGTGGTGCGAGAGGGAGAAGGCATTTCCATTAAAGAAGAGACGAGGGAGCTTCGAGAGGCCAACGGAATTAGATGACAACAAAGAAGAAATCACGACGGCCAACTCGCCGGAGATGATAATCAACAAGAACAACATGAAGGCGACGAAGATGAACAAGAAATACGCCACCACGTCATCGCCGCCGCAGCAGAAGCAAGAACCCGAGGAATCCAAGGTGGGTCCGGAGCTCGCCGTCGCCGGGAAGAAGCGGTCGAGAGGCGGCGCGTTAATGGAGGGATCTCGGTGCAGCCGCGTCAACGGCAGAGGATGGCGCTGCTGCCAGCAGACGCTCGTCGGCTACTCCCTCTGCGAACATCACTTGGGAAAAGGACGCCTCCGCAGCATCAATACCGTCCGCCGCCGCTCCGCCGCCGCGCCCAAGAAGGAGCAGCCCCTCCCGCCGCCGCCGTTGACGCCGGCCAGTAAGAAGAGATCAGTGAAGCTGGGTGTGGTCAAAGCCAGGTCCATAAGTAGCTTGCTCGGTCAAACTGACAACGTCATGGCGGCGCCGCTGTATCCGCTGCCTCATGACGACGACGTATAA

Coding sequence (CDS)

ATGAGGATCAGGAAACGCCAGCTCTCATTACCCTTCTCCTCTCTCCCTCTTTCCTCAGATTCAGATCCCCTCCCCCCGGTGCAACTCCCATGCGCCGCCCCCCACGGCGACGATCCATCTCCCCCGCCGCCCCACCACAACACTGCTCCCAAGTTGCCGATGACATTGGAAGAAGTCGATGGTGATGAGGAAGAAACCAGGGAGATCGCAAGAGTGTTTGGTGCAGAAACTAGCTATGGCGTTGTCCCTCAACAATCCACCTCTTCCCCTCCAGGAGTGGTGGGGAAGTGGTGCGAGAGGGAGAAGGCATTTCCATTAAAGAAGAGACGAGGGAGCTTCGAGAGGCCAACGGAATTAGATGACAACAAAGAAGAAATCACGACGGCCAACTCGCCGGAGATGATAATCAACAAGAACAACATGAAGGCGACGAAGATGAACAAGAAATACGCCACCACGTCATCGCCGCCGCAGCAGAAGCAAGAACCCGAGGAATCCAAGGTGGGTCCGGAGCTCGCCGTCGCCGGGAAGAAGCGGTCGAGAGGCGGCGCGTTAATGGAGGGATCTCGGTGCAGCCGCGTCAACGGCAGAGGATGGCGCTGCTGCCAGCAGACGCTCGTCGGCTACTCCCTCTGCGAACATCACTTGGGAAAAGGACGCCTCCGCAGCATCAATACCGTCCGCCGCCGCTCCGCCGCCGCGCCCAAGAAGGAGCAGCCCCTCCCGCCGCCGCCGTTGACGCCGGCCAGTAAGAAGAGATCAGTGAAGCTGGGTGTGGTCAAAGCCAGGTCCATAAGTAGCTTGCTCGGTCAAACTGACAACGTCATGGCGGCGCCGCTGTATCCGCTGCCTCATGACGACGACGTATAA

Protein sequence

MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVDGDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV

Homology

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BLAST of Moc05g28530 vs. NCBI nr
Match: XP_022151363.1 (uncharacterized protein LOC111019324 isoform X1 [Momordica charantia])

HSP 1 Score: 569.7 bits (1467), Expect = 1.4e-158
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD 60
           MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD
Sbjct: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD 60

Query: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120
           GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD
Sbjct: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120

Query: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180
           DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS
Sbjct: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180

Query: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240
           RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP
Sbjct: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240

Query: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 290
           LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Sbjct: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 289

[Close]

BLAST of Moc05g28530 vs. NCBI nr
Match: XP_022151364.1 (uncharacterized protein LOC111019324 isoform X2 [Momordica charantia])

HSP 1 Score: 563.1 bits (1450), Expect = 1.3e-156
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD 60
           MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAP LPMTLEEVD
Sbjct: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAP-LPMTLEEVD 60

Query: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120
           GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD
Sbjct: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120

Query: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180
           DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS
Sbjct: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180

Query: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240
           RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP
Sbjct: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240

Query: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 290
           LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Sbjct: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 288

[Close]

BLAST of Moc05g28530 vs. NCBI nr
Match: XP_023526164.1 (uncharacterized protein LOC111789724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-58
Identity = 165/313 (52.72%), Postives = 188/313 (60.06%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPL----PPVQLPCAAPHGDDPSPPP-------PHHNTA 60
           MRIRKRQ+ LPFSSL     SDPL    PPVQL    P  D P+  P        H N A
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSDPPNLHPYACDSAAYHTNNA 60

Query: 61  PKLPMTLEEVDGDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKR 120
                 LE+ D  E        VFGAETS GV+P  S+SSP    G+WCER+K FPLKKR
Sbjct: 61  LGKKDQLEQHDSRE------TTVFGAETSNGVLP-LSSSSPQVCDGQWCERDKEFPLKKR 120

Query: 121 RGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVG 180
           RGSFER ++ D N  +  T  +   + +  + K T  NKK               + K+G
Sbjct: 121 RGSFERQSDDDQNNADDQTTTTAAAMESLPDHKKTTKNKK---------------QPKLG 180

Query: 181 PELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRR 240
             L +AGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR 
Sbjct: 181 --LNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRS 240

Query: 241 RSAAA---------------PKKEQPLPPPP---LTPASKKRSVKLGVVKARSISSLLGQ 285
           RS +A                KK  P PPPP   LT ASKKR+ KLG+VKARSISSLLGQ
Sbjct: 241 RSLSAAAAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRT-KLGLVKARSISSLLGQ 288

[Close]

BLAST of Moc05g28530 vs. NCBI nr
Match: KAG6580802.1 (hypothetical protein SDJN03_20804, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017550.1 hypothetical protein SDJN02_19416 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.8 bits (595), Expect = 1.9e-57
Identity = 169/313 (53.99%), Postives = 190/313 (60.70%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPL----PPVQLPCAAPHGDDPS-------PPPPHHNTA 60
           MRIRKRQ+ LPFSSL     SDPL    PPVQL    P  D P+           H N A
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSDPPNLHTYACDSAAYHTNNA 60

Query: 61  PKLPMTLEEVDGDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKR 120
                 LE+ D  E        VFGAETS GV+P  S+SSP    G+WCER+K FPLKKR
Sbjct: 61  LGKKDQLEQHDSRE------TTVFGAETSNGVLP-LSSSSPQVGDGQWCERDKEFPLKKR 120

Query: 121 RGSFERPTELDDNK--EEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESK 180
           RGSFER ++ D N   ++ TTA +  M    ++ K TK NKK               + K
Sbjct: 121 RGSFERQSDDDQNNADDQTTTAAAAAMESLPDHKKTTK-NKK---------------QPK 180

Query: 181 VGPELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTV 240
           +G  L +AGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N V
Sbjct: 181 LG--LNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 240

Query: 241 RRRSAAA-------------PKKEQPLPPPP---LTPASKKRSVKLGVVKARSISSLLGQ 285
           R RS AA              KK  P PPPP   LT ASKKR+ KLG+VKARSISSLLGQ
Sbjct: 241 RSRSLAAAAALKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRT-KLGLVKARSISSLLGQ 287

[Close]

BLAST of Moc05g28530 vs. NCBI nr
Match: XP_038903168.1 (uncharacterized protein LOC120089834 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-57
Identity = 173/326 (53.07%), Postives = 205/326 (62.88%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPL----PPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTL 60
           MRIRKRQL LPFSSL     SDPL    PPVQLP        PS  PP+ +  P    + 
Sbjct: 1   MRIRKRQLPLPFSSL-----SDPLLRHSPPVQLP--------PSSDPPNLHPFPSDNASD 60

Query: 61  EEVDGDEEETREIARVFGAET-SYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFER 120
                 + ++R+   V GAET + GV+P  ++SS  G  G+WCEREKAFPLKKRRGSFER
Sbjct: 61  NNQKLHQHDSRK-TTVIGAETINNGVLPLSTSSSSQG-GGRWCEREKAFPLKKRRGSFER 120

Query: 121 P-TELDDNKE-------EITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESK 180
              + DDN E       ++ T ++ +++ ++     TKMNKK +T SS   QKQ    +K
Sbjct: 121 SNNDQDDNDEDDDEEDDQVVTTSTVKLLPDEKKTMKTKMNKK-STLSS---QKQ----TK 180

Query: 181 VGPELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTV 240
           +G  L + GKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N V
Sbjct: 181 LG--LDLVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 240

Query: 241 RRRSAAA----PK------------KEQPLPPPP---LTPASKKRSVKLGVVKARSISSL 290
           R RS AA    PK               P P PP   LT ASKKR +KLGVVKARSISSL
Sbjct: 241 RSRSLAAATATPKNVVVDVEDEKKPSPSPFPAPPSSSLTLASKKR-MKLGVVKARSISSL 300

[Close]

BLAST of Moc05g28530 vs. ExPASy TrEMBL
Match: A0A6J1DBZ7 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111019324 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 6.9e-159
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD 60
           MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD
Sbjct: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD 60

Query: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120
           GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD
Sbjct: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120

Query: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180
           DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS
Sbjct: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180

Query: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240
           RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP
Sbjct: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240

Query: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 290
           LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Sbjct: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 289

[Close]

BLAST of Moc05g28530 vs. ExPASy TrEMBL
Match: A0A6J1DCV6 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111019324 PE=3 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.5e-157
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEVD 60
           MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAP LPMTLEEVD
Sbjct: 1   MRIRKRQLSLPFSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAP-LPMTLEEVD 60

Query: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120
           GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD
Sbjct: 61  GDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPTELD 120

Query: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180
           DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS
Sbjct: 121 DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRS 180

Query: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240
           RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP
Sbjct: 181 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQP 240

Query: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 290
           LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Sbjct: 241 LPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV 288

[Close]

BLAST of Moc05g28530 vs. ExPASy TrEMBL
Match: A0A6J1F795 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111441497 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 167/314 (53.18%), Postives = 189/314 (60.19%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPL----PPVQLPCAAPHGDDPSPPP-------PHHNTA 60
           MRIRKRQ+ LPFSSL     SDPL    PPVQL    P  D P+  P        H N A
Sbjct: 1   MRIRKRQVPLPFSSLSPLPLSDPLLRRTPPVQLHLQLPSSDPPNLHPYACDSAAYHTNNA 60

Query: 61  PKLPMTLEEVDGDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKR 120
                 LE+ D  E        VFGAE S GV+P  S+SSP    G+WCER+K FPLKKR
Sbjct: 61  LGKKDQLEQHDSRE------TTVFGAEASNGVLP-LSSSSPQVGDGQWCERDKDFPLKKR 120

Query: 121 RGSFERPTELDDNK--EEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESK 180
           RGSFER ++ D N   ++ TTA +   + +  + K T  NKK               + K
Sbjct: 121 RGSFERQSDDDQNNADDQTTTAAAAAAMESLPDHKKTTKNKK---------------QPK 180

Query: 181 VGPELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTV 240
           +G  L +AGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N V
Sbjct: 181 LG--LNLAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 240

Query: 241 RRRSAAA--------------PKKEQPLPPPP---LTPASKKRSVKLGVVKARSISSLLG 285
           R RS AA               KK  P PPPP   LT ASKKR+ KLG+VKARSISSLLG
Sbjct: 241 RSRSLAAAAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRT-KLGLVKARSISSLLG 289

[Close]

BLAST of Moc05g28530 vs. ExPASy TrEMBL
Match: A0A6J1J4K8 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111481709 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 7.7e-57
Identity = 165/312 (52.88%), Postives = 185/312 (59.29%), Query Frame = 0


Query: 1   MRIRKRQLSLPFSSLPLSSDSDPL----PPVQLPCAAPHGDDPSPPP-------PHHNTA 60
           MRIRKRQ+ L FSSL     SDPL    PPVQL    P  D P+  P        H N A
Sbjct: 1   MRIRKRQVPLSFSSLSPLPLSDPLLRRTPPVQLHLQLPSSDPPNLHPYACDSAADHTNNA 60

Query: 61  PKLPMTLEEVDGDEEETREIARVFGAETSYGVVPQQSTSSPPGVVGKWCEREKAFPLKKR 120
                 LE+ D  E        VFGAETS GV+P  S+SSP    G+WCER+K FPLKKR
Sbjct: 61  LGKKDQLEQHDSRE------TTVFGAETSNGVLP-LSSSSPQVGDGQWCERDKEFPLKKR 120

Query: 121 RGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVG 180
           RGSFER ++ D N  +  T  + E +    + K T  NKK               + K+G
Sbjct: 121 RGSFERQSDDDQNNADDQTTTAMESL---QDHKKTTKNKK---------------QPKLG 180

Query: 181 PELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRR 240
             L +AGKKRSRGGALMEGS CSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR 
Sbjct: 181 --LNLAGKKRSRGGALMEGSLCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRS 240

Query: 241 RSAAA--------------PKKEQPLPPPP---LTPASKKRSVKLGVVKARSISSLLGQT 285
           RS AA               KK  P PPPP   LT ASKKR+ KLG+VKARSISSLLGQ 
Sbjct: 241 RSLAAAAATLKNIVTVDKDEKKPPPCPPPPSPSLTLASKKRT-KLGLVKARSISSLLGQP 284

[Close]

BLAST of Moc05g28530 vs. ExPASy TrEMBL
Match: A0A1S3B7U9 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-54
Identity = 162/314 (51.59%), Postives = 195/314 (62.10%), Query Frame = 0


Query: 1   MRIRKRQLSLP-FSSLPLSSDSDPLPPVQLPCAAPHGDDPSPPPPHHNTAPKLPMTLEEV 60
           MRIRKRQL LP FSSL     SDP   + LP ++   D P  P  ++N   KL   L++ 
Sbjct: 1   MRIRKRQLPLPAFSSL-----SDPPVQLHLPSSSSSSDPPINPLDNNNQKQKL---LQQY 60

Query: 61  DGDEEETREIARVFGAET-SYGVVPQQSTSSPPGVVGKWCEREKAFPLKKRRGSFERPT- 120
           D  E        + GAET +  ++P  S+SS  G  G+WCE+EKAFPLKKRRGSFER + 
Sbjct: 61  DSRE------TILIGAETINNALLPHSSSSSQGG--GRWCEKEKAFPLKKRRGSFERSSD 120

Query: 121 -ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAG 180
            + DD+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V G
Sbjct: 121 EDNDDHNKDIQVATK---LQDEKKMIKTKMNKKCTLS-----QKQ----SKVGLDI-VVG 180

Query: 181 KKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA-- 240
           KKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA  
Sbjct: 181 KKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAAT 240

Query: 241 ----------PKKEQPL------PPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAA 290
                      KK  P       PPP     + K+ +KLGVVKARSISSLLGQ D ++A 
Sbjct: 241 PKNIVVIEKDEKKPSPSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGIVAT 284

[Close]

BLAST of Moc05g28530 vs. TAIR 10
Match: AT2G42040.1 (CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 5.3e-26
Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = 0


Query: 138 KNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSR--GGALMEGSRCSRVN 197
           + N K   + K+    +    + +E EE+  G      GKK+++  GG L EGSRCSRVN
Sbjct: 114 EKNEKVVSLRKRRGFINFEDYEDEEDEEASGGGGRINKGKKKAKKSGGGLEEGSRCSRVN 173

Query: 198 GRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSV 257
           GRGWRCCQQTLVGYSLCEHHLGKGR+RS+N    +S      E+      +    KK+ V
Sbjct: 174 GRGWRCCQQTLVGYSLCEHHLGKGRVRSMN----KSGGGRGGEK----KAVVVEVKKKRV 233

Query: 258 KLGVVKARSISSLLGQT 273
           KLG+VKARSISSLLGQT
Sbjct: 234 KLGMVKARSISSLLGQT 242

[Close]

BLAST of Moc05g28530 vs. TAIR 10
Match: AT5G53660.1 (growth-regulating factor 7 )

HSP 1 Score: 42.7 bits (99), Expect = 5.7e-04
Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 0


Query: 186 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS 224
           +E  RC R +G+ WRC ++ +  +  CE HL +GR RS
Sbjct: 108 LEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRS 145

The following BLAST results are available for this feature:

BLAST of Moc05g28530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151363.1	1.4e-158	100.00	uncharacterized protein LOC111019324 isoform X1 [Momordica charantia]	[more]
XP_022151364.1	1.3e-156	99.65	uncharacterized protein LOC111019324 isoform X2 [Momordica charantia]	[more]
XP_023526164.1	6.4e-58	52.72	uncharacterized protein LOC111789724 [Cucurbita pepo subsp. pepo]	[more]
KAG6580802.1	1.9e-57	53.99	hypothetical protein SDJN03_20804, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038903168.1	2.4e-57	53.07	uncharacterized protein LOC120089834 [Benincasa hispida]	[more]

BLAST of Moc05g28530 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g28530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBZ7	6.9e-159	100.00	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111019324 PE=3 SV=...	[more]
A0A6J1DCV6	6.5e-157	99.65	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111019324 PE=3 SV=...	[more]
A0A6J1F795	1.2e-57	53.18	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111441497 PE=3 SV=1	[more]
A0A6J1J4K8	7.7e-57	52.88	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111481709 PE=3 SV=1	[more]
A0A1S3B7U9	2.1e-54	51.59	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103486754 PE=3 SV=1	[more]

BLAST of Moc05g28530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42040.1	5.3e-26	51.82	CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 ...	[more]
AT5G53660.1	5.7e-04	42.11	growth-regulating factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 187..226 e-value: 1.1E-14 score: 53.8
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 185..229 score: 20.406855
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR31602:SF19	OS02G0773600 PROTEIN	coord: 36..278
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 36..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g28530.1	Moc05g28530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding