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Moc05g28330 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCGCCATCGCCGCTCCAAATCTTCTCTGCAAAATCTTCGGCGGCAAGCCTTGTGAAGTTCAAAGCGCTTCTCCAAACCCTAATTGTGTCGCTGGCGAGAGCCATTTCGAGGGCGAAATCGAGGGCGCTGCAGATCCTGAAACACGCCAATTACCAATCCGCCATAGCCCTAAACAGAAACAAGAACAACATCCTCTTCGGCTCCTTCCGCCTCCACTACAACTGGTGCTCTTCCAAAACTTCACACGTCATGCCGGCGCCGGACGATTACTCCATCCCCGCCGATCACGGGCCTCAGCTCGCCGGCTACTTGCAGTGGCTGGAGGAGACAAAAGAATCAGGAGATCACCACCGTCGCCGTAATTGCGACGATCATCATCAGGTAAATGAGATCGATAAATTGGCGGAGATTTTCATCGCCAGCTGCCATGAGAAGTTCCGATTGGAGAAGCAGGAATCGTATCGGAGGTTTCAGGATATGATCGCCAGAAGCTTGTGA ATGGTATCGCCATCGCCGCTCCAAATCTTCTCTGCAAAATCTTCGGCGGCAAGCCTTGTGAAGTTCAAAGCGCTTCTCCAAACCCTAATTGTGTCGCTGGCGAGAGCCATTTCGAGGGCGAAATCGAGGGCGCTGCAGATCCTGAAACACGCCAATTACCAATCCGCCATAGCCCTAAACAGAAACAAGAACAACATCCTCTTCGGCTCCTTCCGCCTCCACTACAACTGGTGCTCTTCCAAAACTTCACACGTCATGCCGGCGCCGGACGATTACTCCATCCCCGCCGATCACGGGCCTCAGCTCGCCGGCTACTTGCAGTGGCTGGAGGAGACAAAAGAATCAGGAGATCACCACCGTCGCCGTAATTGCGACGATCATCATCAGGTAAATGAGATCGATAAATTGGCGGAGATTTTCATCGCCAGCTGCCATGAGAAGTTCCGATTGGAGAAGCAGGAATCGTATCGGAGGTTTCAGGATATGATCGCCAGAAGCTTGTGA ATGGTATCGCCATCGCCGCTCCAAATCTTCTCTGCAAAATCTTCGGCGGCAAGCCTTGTGAAGTTCAAAGCGCTTCTCCAAACCCTAATTGTGTCGCTGGCGAGAGCCATTTCGAGGGCGAAATCGAGGGCGCTGCAGATCCTGAAACACGCCAATTACCAATCCGCCATAGCCCTAAACAGAAACAAGAACAACATCCTCTTCGGCTCCTTCCGCCTCCACTACAACTGGTGCTCTTCCAAAACTTCACACGTCATGCCGGCGCCGGACGATTACTCCATCCCCGCCGATCACGGGCCTCAGCTCGCCGGCTACTTGCAGTGGCTGGAGGAGACAAAAGAATCAGGAGATCACCACCGTCGCCGTAATTGCGACGATCATCATCAGGTAAATGAGATCGATAAATTGGCGGAGATTTTCATCGCCAGCTGCCATGAGAAGTTCCGATTGGAGAAGCAGGAATCGTATCGGAGGTTTCAGGATATGATCGCCAGAAGCTTGTGA MVSPSPLQIFSAKSSAASLVKFKALLQTLIVSLARAISRAKSRALQILKHANYQSAIALNRNKNNILFGSFRLHYNWCSSKTSHVMPAPDDYSIPADHGPQLAGYLQWLEETKESGDHHRRRNCDDHHQVNEIDKLAEIFIASCHEKFRLEKQESYRRFQDMIARSL Homology
BLAST of Moc05g28330 vs. NCBI nr
Match: XP_022983138.1 (uncharacterized protein LOC111481779 [Cucurbita maxima]) HSP 1 Score: 179.9 bits (455), Expect = 1.8e-41 Identity = 110/174 (63.22%), Postives = 122/174 (70.11%), Query Frame = 0
BLAST of Moc05g28330 vs. NCBI nr
Match: XP_022935250.1 (uncharacterized protein LOC111442186 [Cucurbita moschata]) HSP 1 Score: 178.3 bits (451), Expect = 5.4e-41 Identity = 106/167 (63.47%), Postives = 119/167 (71.26%), Query Frame = 0
BLAST of Moc05g28330 vs. NCBI nr
Match: XP_023526429.1 (uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.9 bits (450), Expect = 7.0e-41 Identity = 108/170 (63.53%), Postives = 119/170 (70.00%), Query Frame = 0
BLAST of Moc05g28330 vs. NCBI nr
Match: KAG6580813.1 (hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017563.1 hypothetical protein SDJN02_19429, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.8 bits (447), Expect = 1.6e-40 Identity = 106/170 (62.35%), Postives = 119/170 (70.00%), Query Frame = 0
BLAST of Moc05g28330 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida]) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36 Identity = 102/175 (58.29%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of Moc05g28330 vs. ExPASy TrEMBL
Match: A0A6J1J6X1 (uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 9.0e-42 Identity = 110/174 (63.22%), Postives = 122/174 (70.11%), Query Frame = 0
BLAST of Moc05g28330 vs. ExPASy TrEMBL
Match: A0A6J1FA41 (uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC111442186 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.6e-41 Identity = 106/167 (63.47%), Postives = 119/167 (71.26%), Query Frame = 0
BLAST of Moc05g28330 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.5e-36 Identity = 103/176 (58.52%), Postives = 121/176 (68.75%), Query Frame = 0
BLAST of Moc05g28330 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.5e-36 Identity = 103/176 (58.52%), Postives = 121/176 (68.75%), Query Frame = 0
BLAST of Moc05g28330 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 3.3e-36 Identity = 101/180 (56.11%), Postives = 118/180 (65.56%), Query Frame = 0
BLAST of Moc05g28330 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 1.0e-26 Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 0
BLAST of Moc05g28330 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21 Identity = 80/206 (38.83%), Postives = 105/206 (50.97%), Query Frame = 0
BLAST of Moc05g28330 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14 Identity = 66/178 (37.08%), Postives = 93/178 (52.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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