Moc05g28010 (gene) Bitter gourd (OHB3-1) v2

BLAST of Moc05g28010 vs. NCBI nr
Match: XP_022154235.1 (DNA-directed RNA polymerase I subunit 1 [Momordica charantia])

HSP 1 Score: 3374.7 bits (8749), Expect = 0.0e+00
Identity = 1689/1690 (99.94%), Postives = 1690/1690 (100.00%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC
Sbjct: 5    TEGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL
Sbjct: 65   KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR
Sbjct: 125  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS
Sbjct: 185  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
            HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA
Sbjct: 245  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
            TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS
Sbjct: 305  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQ 769
            NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQ
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQ 424

Query: 770  KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPET 829
            KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPET
Sbjct: 425  KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPET 484

Query: 830  HPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQD 889
            HPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQD
Sbjct: 485  HPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQD 544

Query: 890  GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEIS 949
            GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEIS
Sbjct: 545  GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEIS 604

Query: 950  RAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIST 1009
            RAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIST
Sbjct: 605  RAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIST 664

Query: 1010 SRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVE 1069
            SRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVE
Sbjct: 665  SRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVE 724

Query: 1070 KDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKL 1129
            KDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKL
Sbjct: 725  KDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKL 784

Query: 1130 DKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFT 1189
            DKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFT
Sbjct: 785  DKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFT 844

Query: 1190 VFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLN 1249
            VFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLN
Sbjct: 845  VFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLN 904

Query: 1250 IEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAK 1309
            IEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAK
Sbjct: 905  IEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAK 964

Query: 1310 GGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQE 1369
            GGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQE
Sbjct: 965  GGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQE 1024

Query: 1370 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDG 1429
            YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDG
Sbjct: 1025 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDG 1084

Query: 1430 IDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKA 1489
            IDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKA
Sbjct: 1085 IDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKA 1144

Query: 1490 PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL 1549
            PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL
Sbjct: 1145 PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL 1204

Query: 1550 GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF 1609
            GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF
Sbjct: 1205 GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF 1264

Query: 1610 SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI 1669
            SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI
Sbjct: 1265 SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI 1324

Query: 1670 NGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEM 1729
            NGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEM
Sbjct: 1325 NGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEM 1384

Query: 1730 DYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLK 1789
            DYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLK
Sbjct: 1385 DYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLK 1444

Query: 1790 GKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQK 1849
            GKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQK
Sbjct: 1445 GKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQK 1504

Query: 1850 VSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQ 1909
            VSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQ
Sbjct: 1505 VSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQ 1564

Query: 1910 DELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSG 1969
            DELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSG
Sbjct: 1565 DELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSG 1624

Query: 1970 GYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTG 2029
            GYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTG
Sbjct: 1625 GYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTG 1684

Query: 2030 SFDLMQKIEV 2040
            SFDLMQKIEV
Sbjct: 1685 SFDLMQKIEV 1694

BLAST of Moc05g28010 vs. NCBI nr
Match: XP_023538901.1 (DNA-directed RNA polymerase I subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 3058.1 bits (7927), Expect = 0.0e+00
Identity = 1515/1692 (89.54%), Postives = 1603/1692 (94.74%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+AVAFSFMT++EVRKHSAVKVTAPILLD MGRPV+GGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKAVAFSFMTEDEVRKHSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLF+ILHN+LQRTCFSCHHFRAG SQVEKC SQL
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            +LI NGDVV+AKELDSE L+E S SK+SN  QNMQP KWTSLQFSEAIS VNKFLKPKQR
Sbjct: 125  ELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKI+RPTFGWL+M+GLPGAHKRANAIRGCKP SV SGAEGISS+EEE T  
Sbjct: 185  ECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEENTVP 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
             TTVIN SE D FDDTATKA  EDSEEV PE+F+ KNFS+GHL+PSEVK I+++LWKNEA
Sbjct: 245  QTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSAGHLLPSEVKHILKRLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
             LCSFISDIQHQG+G KAGHSMFFLE VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQS
Sbjct: 305  MLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMF 769
            NISLGNAHANKSEHSKIVRLWMDLQQS+NVLFDSKTA+  GQKD+SVGICQLLEKKEGMF
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMF 424

Query: 770  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGP 829
            RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGP
Sbjct: 425  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGP 484

Query: 830  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHL 889
            ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGS DYEFEGKIVNRHL
Sbjct: 485  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHL 544

Query: 890  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 949
            +DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE
Sbjct: 545  EDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 604

Query: 950  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGI 1009
            ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL FDEFSQLLYSSGI
Sbjct: 605  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGI 664

Query: 1010 STSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFC 1069
            STSRPCASS+KPGQK+F LDFE+EMLPVLPA+WKPEPLWTGKQVVTALL+HITRG+PPFC
Sbjct: 665  STSRPCASSDKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFC 724

Query: 1070 VEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYS 1129
            VEKDVKIPRGFFKCRHTGNNSS VKV DGDKSKRKRTWN  +LGK EVPDEGNSK+ +YS
Sbjct: 725  VEKDVKIPRGFFKCRHTGNNSSNVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKEDDYS 784

Query: 1130 KLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRL 1189
            K DKLKAE LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAG+LLSVMSRL
Sbjct: 785  KFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRL 844

Query: 1190 FTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 1249
            FTV+LQMHGFTCGVDDLLL++CMDKERE+QLQICE IGEQVHLGFLKVKDGEKLDPM LQ
Sbjct: 845  FTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQ 904

Query: 1250 LNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 1309
            LNIEKTI +NGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV NCISLMTTSG
Sbjct: 905  LNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSG 964

Query: 1310 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRP 1369
            AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRP
Sbjct: 965  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 1024

Query: 1370 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGE 1429
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLK+ YDHTVRDADGSIIQF+YGE
Sbjct: 1025 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGE 1084

Query: 1430 DGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKD 1489
            DG+DVHK AFI KFEAL AN +M+YQKSHHQ   +N YINELPS LQEKAEVIYNSF+KD
Sbjct: 1085 DGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSFAKD 1144

Query: 1490 KAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1549
            KAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV
Sbjct: 1145 KAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1204

Query: 1550 TLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV 1609
            TLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVV
Sbjct: 1205 TLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVV 1264

Query: 1610 PFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLS 1669
            PFS RKREICSIYKLEI+FYPLE+NPQH HVSSEDLEEILEFVFVRELEDSIQNEM+LLS
Sbjct: 1265 PFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLS 1324

Query: 1670 RINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATD 1729
            RI+GIKNFVPDSQS+G SE D+VSSSQ EENDDDD VGND+D AEDLGFDMKKQKLR  D
Sbjct: 1325 RISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDEVGNDLDVAEDLGFDMKKQKLRTND 1384

Query: 1730 EMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSN 1789
            EMDYEDDS+EELN K PSAGFESEVDQGDE +ITNDD M+I KD+TSE+QTEI DVSKSN
Sbjct: 1385 EMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSN 1444

Query: 1790 LKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTA 1849
             KGKT KT+NKKKK AK EFSRKDYDRAIFVAAKGNHFEVHFKF NEPHILLTQ+AQ+TA
Sbjct: 1445 SKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVAAKGNHFEVHFKFTNEPHILLTQIAQRTA 1504

Query: 1850 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 1909
            QKVSIQSSGKIIRCQQITCKEGQVIYHGN++K RK +K EEKEK+PA+QTTGVDF+ LWE
Sbjct: 1505 QKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWE 1564

Query: 1910 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 1969
            LQDELD RYIYSNDIHAML+TYGVEAARET++REI+NIFSSYGISVNIRHLTL+ADYMTH
Sbjct: 1565 LQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTH 1624

Query: 1970 SGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMG 2029
            SGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMG
Sbjct: 1625 SGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMG 1684

Query: 2030 TGSFDLMQKIEV 2040
            TGSFDLMQKI+V
Sbjct: 1685 TGSFDLMQKIDV 1695

BLAST of Moc05g28010 vs. NCBI nr
Match: XP_022938891.1 (DNA-directed RNA polymerase I subunit 1 [Cucurbita moschata])

HSP 1 Score: 3057.7 bits (7926), Expect = 0.0e+00
Identity = 1516/1692 (89.60%), Postives = 1604/1692 (94.80%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+AVAFSFMT++EVRKHSAVKVTAPILLD MGRPV+GGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKAVAFSFMTEDEVRKHSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLF+ILHN+LQRTCFSCHHFRAG SQVEKC SQL
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            +LI NGDVV+AKELDSE L+E S SK+SN  QNMQP KWTSLQFSEAIS VNKFLKPKQR
Sbjct: 125  ELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKI+RPTFGWL+M+GLPGAHKRANAIRGCKP SV SGAEGISS+EEE T  
Sbjct: 185  ECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEENTVP 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
             TTVIN SE D FDDTATKA  EDSEEV PE+F+ KNFS+GHL+PSEVK I+++LWKNEA
Sbjct: 245  QTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSAGHLLPSEVKHILKRLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
             LCSFISDIQHQG+G KAGHSMFFLE VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQS
Sbjct: 305  MLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMF 769
            NISLGNAHANKSEHSKIVRLWMDLQQS+NVLFDSKTA+  GQKD+SVGICQLLEKKEGMF
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMF 424

Query: 770  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGP 829
            RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGP
Sbjct: 425  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGP 484

Query: 830  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHL 889
            ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGS DYEFEGKIVNRHL
Sbjct: 485  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHL 544

Query: 890  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 949
            +DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE
Sbjct: 545  EDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 604

Query: 950  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGI 1009
            ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL FDEFSQLLYSSGI
Sbjct: 605  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGI 664

Query: 1010 STSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFC 1069
            STSRPCASSEKPGQK+F LDFE+EMLPVLPA+WKPEPLWTGKQVVTALL+HITRG+PPFC
Sbjct: 665  STSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFC 724

Query: 1070 VEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYS 1129
            VEKDVKIPRGFFK RHTGNNSSKVKV DGDKSKRKRTWN  +LGK EVPDEGNSK+ +YS
Sbjct: 725  VEKDVKIPRGFFKSRHTGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKRDDYS 784

Query: 1130 KLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRL 1189
            K DKLKAE LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAG+LLSVMSRL
Sbjct: 785  KFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRL 844

Query: 1190 FTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 1249
            FTV+LQMHGFTCGVDDLLL++CMDKERE+QLQICE IGEQVHLGFLKVKDGEKLDPM LQ
Sbjct: 845  FTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQ 904

Query: 1250 LNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 1309
            LNIEKTI +NGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV NCISLMTTSG
Sbjct: 905  LNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSG 964

Query: 1310 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRP 1369
            AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRP
Sbjct: 965  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 1024

Query: 1370 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGE 1429
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLK+ YDHTVRDADGSIIQF+YGE
Sbjct: 1025 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGE 1084

Query: 1430 DGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKD 1489
            DG+DVHK AFI KFEAL AN +M+YQKSHHQ   +N YINELPS LQEKAEVIYNSF+KD
Sbjct: 1085 DGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSFAKD 1144

Query: 1490 KAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1549
            KAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV
Sbjct: 1145 KAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1204

Query: 1550 TLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV 1609
            TLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVV
Sbjct: 1205 TLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVV 1264

Query: 1610 PFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLS 1669
            PFS RKREICSIYKLEI+FYPLE+NPQH HVSSEDLEEILEFVFVRELEDSIQNEM+LLS
Sbjct: 1265 PFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLS 1324

Query: 1670 RINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATD 1729
            RI+GIKNFVPDSQS+G SE D+VSSSQ EENDDDD+VGND+D AEDLGFDMKKQKLR TD
Sbjct: 1325 RISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTD 1384

Query: 1730 EMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSN 1789
            EMDYEDDS+EELN K PSAGFESEVDQGDE +ITNDD M+I KD+TSE+QTEI DVSKSN
Sbjct: 1385 EMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSN 1444

Query: 1790 LKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTA 1849
             KGKT KT+NKKKK AK EFSRKDYDRAIFV+AKGNHFEVHFKF NEPHILLTQ+AQ+TA
Sbjct: 1445 SKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTA 1504

Query: 1850 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 1909
            QKVSIQSSGKIIRCQQITCKEGQVIYHGN+ K RK +K EEKEK+PA+QTTGVDF+ LWE
Sbjct: 1505 QKVSIQSSGKIIRCQQITCKEGQVIYHGNDTKVRKNIKPEEKEKVPALQTTGVDFKTLWE 1564

Query: 1910 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 1969
            LQDELD RYIYSNDIHAML+TYGVEAARET++REI+NIFSSYGISVNIRHLTL+ADYMTH
Sbjct: 1565 LQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTH 1624

Query: 1970 SGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMG 2029
            SGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMG
Sbjct: 1625 SGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMG 1684

Query: 2030 TGSFDLMQKIEV 2040
            TGSFDLMQKI+V
Sbjct: 1685 TGSFDLMQKIDV 1695

BLAST of Moc05g28010 vs. NCBI nr
Match: XP_022971295.1 (DNA-directed RNA polymerase I subunit 1 [Cucurbita maxima])

HSP 1 Score: 3054.6 bits (7918), Expect = 0.0e+00
Identity = 1516/1692 (89.60%), Postives = 1603/1692 (94.74%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+AVAFSFMT++EVRK SAVKVTAPILLD MGRPV+GGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKAVAFSFMTEDEVRKLSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLF+ILHN+LQRTCFSCHHFRAG SQVEKC SQL
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            +LI NGDVV+AKELDSE L+E S SK+SN  QNMQP KWTSLQFSEAIS VNKFLKPKQR
Sbjct: 125  ELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKI+RPTFGWL+M+GLPGAHKRANAIRGCKP SV SGAEGISS+EEE T  
Sbjct: 185  ECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEENTVP 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
             TTVIN SE D FDDTATKA  EDSEEV PE+F+ KNFS+ HL+PSEVK I+++LWKNEA
Sbjct: 245  QTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSTVHLLPSEVKHILKRLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
             LCSFISDIQHQG+G KAGHSMFFLE VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQS
Sbjct: 305  MLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMF 769
            NISLGNAHANKSEHSKIVRLWMDLQQS+NVLFDSKTA+  GQKD+SVGICQLLEKKEGMF
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMF 424

Query: 770  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGP 829
            RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGP
Sbjct: 425  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGP 484

Query: 830  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHL 889
            ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGS DYEFEGKIVNRHL
Sbjct: 485  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHL 544

Query: 890  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 949
            +DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE
Sbjct: 545  EDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 604

Query: 950  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGI 1009
            ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL FDEFSQLLYSSGI
Sbjct: 605  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGI 664

Query: 1010 STSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFC 1069
            STSRPCASSEKPGQK+F LDFE+EMLPVLPA+WKPEPLWTGKQVVTALL+HITRG+PPFC
Sbjct: 665  STSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFC 724

Query: 1070 VEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYS 1129
            VEKDVKIPRGFFKCRHTGNNSSKVKV DGDKSKRKRTWN  +LGK EVPDEGNSKK +YS
Sbjct: 725  VEKDVKIPRGFFKCRHTGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKKDDYS 784

Query: 1130 KLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRL 1189
            K DKLKAE LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAG+LLSVMSRL
Sbjct: 785  KFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRL 844

Query: 1190 FTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 1249
            FTV+LQMHGFTCGVDDLLL++CMDKERE+QLQICE IGEQVHLGFLKVKDGEKLDPM LQ
Sbjct: 845  FTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQ 904

Query: 1250 LNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 1309
            LNIEKTI +NGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV NCISLMTTSG
Sbjct: 905  LNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSG 964

Query: 1310 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRP 1369
            AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRP
Sbjct: 965  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 1024

Query: 1370 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGE 1429
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLK+ YDHTVRDADGSIIQF+YGE
Sbjct: 1025 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGE 1084

Query: 1430 DGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKD 1489
            DG+DVHK AFI KFEAL AN +M+YQKSHHQ   +N YINELPS LQEKAEVIYNSF+KD
Sbjct: 1085 DGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSFAKD 1144

Query: 1490 KAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1549
            KAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV
Sbjct: 1145 KAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1204

Query: 1550 TLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV 1609
            TLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVV
Sbjct: 1205 TLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVV 1264

Query: 1610 PFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLS 1669
            PFS RKREICSIYKLEI+FYPLE+NPQH HVSSEDLEEILEFVFVRELEDSIQNEM+LLS
Sbjct: 1265 PFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLS 1324

Query: 1670 RINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATD 1729
            RI+GIKNFVPDSQS+G SE D+VSSSQ EENDDDD+VGND+D AEDLGFDMKKQKLR TD
Sbjct: 1325 RISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTD 1384

Query: 1730 EMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSN 1789
            EMDYEDDS+EELN K PSAGFESEVDQGDE +ITNDD M+I KD+TSE+QT I DVSKSN
Sbjct: 1385 EMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTVIIDVSKSN 1444

Query: 1790 LKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTA 1849
             KGKT KT+NKKKK AK EFSRKDYDRAIFVAAKGNHFEVHFKF NEPHILLTQ+AQ+TA
Sbjct: 1445 SKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVAAKGNHFEVHFKFTNEPHILLTQIAQRTA 1504

Query: 1850 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 1909
            QKVSIQSSGKIIRCQQITCKEGQVIYHGN++K RK +K EEKEK+PA+QTTGVDF+ LWE
Sbjct: 1505 QKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWE 1564

Query: 1910 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 1969
            LQDELD RYIYSNDIHAML+TYGVEAARET++REI+NIFSSYGISVNIRHLTL+ADYMTH
Sbjct: 1565 LQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTH 1624

Query: 1970 SGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMG 2029
            SGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMG
Sbjct: 1625 SGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMG 1684

Query: 2030 TGSFDLMQKIEV 2040
            TGSFDLMQKI+V
Sbjct: 1685 TGSFDLMQKIDV 1695

BLAST of Moc05g28010 vs. NCBI nr
Match: KAG6596219.1 (DNA-directed RNA polymerase I subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 3039.6 bits (7879), Expect = 0.0e+00
Identity = 1510/1692 (89.24%), Postives = 1600/1692 (94.56%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+AVAFSFMT++EVRKHSAVKVTAPILLD MGRPV+GGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKAVAFSFMTEDEVRKHSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLF+ILHN+LQRTCFSCHHFRAG SQVEKC SQL
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            +LI NGDVV+AKELDSE L+E S SK+SN  QNM+P KWTSLQFSEAIS VNKFLKPKQR
Sbjct: 125  ELILNGDVVKAKELDSELLTESSDSKHSNEMQNMKPKKWTSLQFSEAISAVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKI+RPTFGWL+M+GLPGAHKRANAIRG KP SV SGAEGISS+EEE T  
Sbjct: 185  ECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGYKPASVSSGAEGISSIEEENTVP 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
             TTVIN SE D FDDTATKA  EDSEEV PE+F+ KNFS+GHL+PSEVK I+++LWKNEA
Sbjct: 245  QTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSAGHLLPSEVKHILKRLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
             LCSFISDIQHQG+G KAGHSMFFLE VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQS
Sbjct: 305  MLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMF 769
            NISLGNAHANKSEHSKIVRLWMDLQQS+NVLFDSKTA+  GQKD+SVGICQLLEKKEGMF
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMF 424

Query: 770  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGP 829
            RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGP
Sbjct: 425  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGP 484

Query: 830  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHL 889
            ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGS DYEFEGKIVNRHL
Sbjct: 485  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHL 544

Query: 890  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 949
            +DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE
Sbjct: 545  EDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 604

Query: 950  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGI 1009
            ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL FDEFSQLLYSSGI
Sbjct: 605  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGI 664

Query: 1010 STSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFC 1069
            STSRPCASSEKPGQK+F LDFE+EMLPVLPA+WKPEPLWTGKQVVTALL+HITRG+PPFC
Sbjct: 665  STSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFC 724

Query: 1070 VEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYS 1129
            VEKDVKIPRGFFKCRH+GNNSSKVKV DGDKSKRKRTWN  +LGK EVPDEGNSKK +YS
Sbjct: 725  VEKDVKIPRGFFKCRHSGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKKDDYS 784

Query: 1130 KLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRL 1189
            K DKLKAE LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAG+LLSVMSRL
Sbjct: 785  KFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRL 844

Query: 1190 FTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 1249
            FTV+LQMHGFTCGVDDLLL++CMDKERE+QLQICE IGEQVHLGFLKVKDGEKLDPM LQ
Sbjct: 845  FTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQ 904

Query: 1250 LNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 1309
            LNIEKTI +NGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV NCISLMTTSG
Sbjct: 905  LNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSG 964

Query: 1310 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRP 1369
            AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRP
Sbjct: 965  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 1024

Query: 1370 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGE 1429
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLK+ YDHTVRDADGSIIQF+YGE
Sbjct: 1025 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGE 1084

Query: 1430 DGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKD 1489
            DG+DVHK AFI KFEAL AN +M+YQKSHHQ   +N YINELPS LQEKAEVIYNS +KD
Sbjct: 1085 DGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKD 1144

Query: 1490 KAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1549
            KAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV
Sbjct: 1145 KAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1204

Query: 1550 TLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV 1609
            TLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVV
Sbjct: 1205 TLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVV 1264

Query: 1610 PFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLS 1669
            PFS RKREICSIYKLEI+FYPLE+NPQH HVSSEDLEEILEFVFVRELEDSIQNEM+LLS
Sbjct: 1265 PFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLS 1324

Query: 1670 RINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATD 1729
            RI+GIKNFVPDSQS+G SE D+VSSS+ EENDDDD+VGND+D AEDLGFDMKKQKLR TD
Sbjct: 1325 RISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTD 1384

Query: 1730 EMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSN 1789
            EMDYEDDS+EELN K  SAGFESEVDQGDE +ITNDD M+I KD+TSE+QTEI DVSKSN
Sbjct: 1385 EMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSN 1444

Query: 1790 LKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTA 1849
             KGKT KT+NKKKK AK EFSRKDYDRAIFV+AKGNHFEVHFKF NEPHILLT   Q+TA
Sbjct: 1445 SKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLT---QRTA 1504

Query: 1850 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 1909
            QKVSIQSSGKIIRCQQITCKEGQVIYHGN++K RK +K EEKEK+PA+QTTGVDF+ LWE
Sbjct: 1505 QKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWE 1564

Query: 1910 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 1969
            LQDELD RYIYSNDIHAML+TYGVEAARET++REI+NIFSSYGISVNIRHLTL+ADYMTH
Sbjct: 1565 LQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTH 1624

Query: 1970 SGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMG 2029
            SGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMG
Sbjct: 1625 SGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMG 1684

Query: 2030 TGSFDLMQKIEV 2040
            TGSFDLMQKI+V
Sbjct: 1685 TGSFDLMQKIDV 1692

BLAST of Moc05g28010 vs. ExPASy Swiss-Prot
Match: Q9SVY0 (DNA-directed RNA polymerase I subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPA1 PE=3 SV=1)

HSP 1 Score: 1863.6 bits (4826), Expect = 0.0e+00
Identity = 990/1711 (57.86%), Postives = 1241/1711 (72.53%), Query Frame = 0

Query: 352  GASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKS 411
            GAS+ VE+V FSFMT+++VRKHS +KVT+PIL D +G P  GGLYD  +G  DD   C S
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILHDNVGNPFPGGLYDLKLGPKDDKQACNS 81

Query: 412  CGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQLDL 471
            CGQ  L CPGHCGHI+LV P+Y+PLLF +L N LQR CF CHHF A    VE+ VSQL L
Sbjct: 82   CGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACFFCHHFMAKPEDVERAVSQLKL 141

Query: 472  ISNGDVVEAKELDSEWLSEPSHSKYSNGR---------------QNMQPGKWTSLQFSEA 531
            I  GD+V AK+L+S   + P+ SK S+                  +++  +WTSLQF+E 
Sbjct: 142  IIKGDIVSAKQLES---NTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQFAEV 201

Query: 532  ISVVNKFLKPKQRECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGA 591
             +V+  F++   + C  C   NPK+ +P FGW+ M  +  +   AN IRG K        
Sbjct: 202  TAVLKNFMRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIRGLKL------K 261

Query: 592  EGISSLEEETTFSHTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSE 651
            +  SS+E    F  + +   SE +  D    K   E S EV  E   +++ S   L+PSE
Sbjct: 262  KSTSSVENPDGFDDSGIDALSEVEDGD----KETREKSTEVAAE--FEEHNSKRDLLPSE 321

Query: 652  VKVIMRQLWKNEATLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVME 711
            V+ I++ LW+NE   CSFI D+   G  +K  +SMFFLE+VL+PP KFRPP  GGDSVME
Sbjct: 322  VRNILKHLWQNEHEFCSFIGDLWQSG-SEKIDYSMFFLESVLVPPTKFRPPTTGGDSVME 381

Query: 712  HPQTVLLNKVLQSNISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISV 771
            HPQTV LNKV++SN  LGNA  NK + SK++  W +LQ+SVNVLFDSKTA    Q+D S 
Sbjct: 382  HPQTVGLNKVIESNNILGNACTNKLDQSKVIFRWRNLQESVNVLFDSKTATVQSQRD-SS 441

Query: 772  GICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAW 831
            GICQLLEKKEG+FRQKMMGKRVN ACRSVISPDPY+AVN+IGIPP FAL+L+YPERVT W
Sbjct: 442  GICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVTPW 501

Query: 832  NVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQG-S 891
            NV+KLR AIINGP+ HPGATHY DK +T+K  L  + K+R +I+RKL SSRG   + G +
Sbjct: 502  NVEKLREAIINGPDIHPGATHYSDKSSTMK--LPSTEKARRAIARKLLSSRGATTELGKT 561

Query: 892  GDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNAD 951
             D  FEGK V+RH++DGDIVLVNRQPTLHKPS+MAH VRVLKGEKT+R+HYANCSTYNAD
Sbjct: 562  CDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYNAD 621

Query: 952  FDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL 1011
            FDGDEMNVHFPQDEISRAEAYNIVNANNQY +P++GEP+RALIQDHI+S+VLLTK+DTFL
Sbjct: 622  FDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDTFL 681

Query: 1012 NFDEFSQLLYSSGISTSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVT 1071
            + D F+QLL+SSG++       S + G+KV     +AE+L V PAI KP PLWTGKQV+T
Sbjct: 682  DKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVIT 741

Query: 1072 ALLEHITRGSPPFCVEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKS 1131
            A+L  IT+G PPF VEK  K+P  FFKCR     S +VK   GD +K+K           
Sbjct: 742  AVLNQITKGHPPFTVEKATKLPVDFFKCR-----SREVKPNSGDLTKKK----------- 801

Query: 1132 EVPDEGNSKKKEYSKLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYG 1191
                          ++D+   ++L++D L I KNE V GVIDKAQF DYGLVHTVHELYG
Sbjct: 802  --------------EIDESWKQNLNEDKLHIRKNEFVCGVIDKAQFADYGLVHTVHELYG 861

Query: 1192 SNTAGLLLSVMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFL 1251
            SN AG LLSV SRLFTVFLQ HGFTCGVDDL++L+ MD+ER +QLQ CE +GE+V     
Sbjct: 862  SNAAGNLLSVFSRLFTVFLQTHGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTF 921

Query: 1252 KVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLK 1311
             +    ++DP  ++  IE+ + ++GE AL SLDR + + LN+   +  V+ DLLS+GLLK
Sbjct: 922  GIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQ-CSSKGVMNDLLSDGLLK 981

Query: 1312 PSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRA 1371
               +NCISLMT SGAKG   NFQQISSHLGQQ LEGKRVPRMVSGKTLPCF  WDW+ RA
Sbjct: 982  TPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRA 1041

Query: 1372 GGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTV 1431
            GGFI DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KN+ESLK+ YD TV
Sbjct: 1042 GGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTV 1101

Query: 1432 RDADGSIIQFQYGEDGIDVHKTAFITKFEALVANRDMLYQK-SHHQLGKYNIYINELPSA 1491
            RDADGSIIQFQYGEDG+DVH+++FI KF+ L  N+DM+ QK S   L   + YI++LP +
Sbjct: 1102 RDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCSEDMLSGASSYISDLPIS 1161

Query: 1492 LQEKAEVIYNSFSKDK--APGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPST 1551
            L++ AE    +   ++  A   V++++  +L+++K+ +SLAQPGEPVGVLAAQS+GEPST
Sbjct: 1162 LKKGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPST 1221

Query: 1552 QMTLNTFHHAGRGEMNVTLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKL 1611
            QMTLNTFH AGRGEMNVTLGIPRLQEILMTA+ +IKTPIMTCPL  G + + A  + ++L
Sbjct: 1222 QMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTKEDANDITDRL 1281

Query: 1612 KKITVADIIESMEVTVVPFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFV 1671
            +KITVADII+SME++VVP++V + E+CSI+KL+I  Y  E+ P+H  ++ ED EE +  V
Sbjct: 1282 RKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMRAV 1341

Query: 1672 FVRELEDSIQNEMILLSRINGIKNFVPDSQSQGSSERDE-VSSSQHEENDDDDNVGNDVD 1731
            F+R+LED+I+  M +L RI GI N V    +   ++ D+ VS  Q+E++ DDD  G +VD
Sbjct: 1342 FLRKLEDAIETHMKMLHRIRGIHNDVTGPIAGNETDNDDSVSGKQNEDDGDDDGEGTEVD 1401

Query: 1732 AAEDLGFDMKKQKLRATDEMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIA 1791
               DLG D +KQK + TDEMDYE++S++E N  +  +G E       E++  N+D  +++
Sbjct: 1402 ---DLGSDAQKQKKQETDEMDYEENSEDETNEPSSISGVED-----PEMDSENED-TEVS 1461

Query: 1792 KDSTSENQTEITDVSKSNLKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHF 1851
            K+ T E Q E  +  K     K  K  +KKK+R   +F R   DR IFV  +G  FEVHF
Sbjct: 1462 KEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRR---KFVRAKSDRHIFVKGEGEKFEVHF 1521

Query: 1852 KFA-NEPHILLTQVAQKTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEE 1911
            KFA ++PHILL Q+AQ+TAQKV IQ+SGKI RC    C + QVIYHG+N KER+++  +E
Sbjct: 1522 KFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCGDPQVIYHGDNPKERREISNDE 1581

Query: 1912 KEKIPAVQTTGVDFRMLWELQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSS 1971
            K+  PA+  +GVDF  LWE QD+LDVRY+YSN IH ML  +GVEAARET++REI ++F S
Sbjct: 1582 KKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFKS 1641

Query: 1972 YGISVNIRHLTLVADYMTHSGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEI 2031
            YGISV+IRHL L+ADYMT SGGYRPMSR+GGIAES SPF RMTFETA+KFIVQAA +GE 
Sbjct: 1642 YGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEK 1670

Query: 2032 DNLETPSARICLGLPAKMGTGSFDLMQKIEV 2040
            D LETPSARICLGLPA  GTG FDLMQ++E+
Sbjct: 1702 DTLETPSARICLGLPALSGTGCFDLMQRVEL 1670

BLAST of Moc05g28010 vs. ExPASy Swiss-Prot
Match: P15398 (DNA-directed RNA polymerase I subunit rpa1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpa1 PE=1 SV=2)

HSP 1 Score: 937.2 bits (2421), Expect = 3.2e-271
Identity = 631/1824 (34.59%), Postives = 944/1824 (51.75%), Query Frame = 0

Query: 348  DITQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTT 407
            +I Q  S  +++V F     ++V K S  ++  P+LLD +  P +GGLYD A+G     +
Sbjct: 2    NIAQPVSSEIKSVKFGIYDVDDVEKISVKQIVNPVLLDNLNHPTNGGLYDLALGPYLKNS 61

Query: 408  LCKSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVS 467
            +C +C     YCPGH GHI L  P Y+PL F  ++N+L+ TC  CHHF+  + +V     
Sbjct: 62   VCATCHLDERYCPGHFGHIVLPIPAYHPLFFSQMYNLLRSTCLYCHHFKLSKVKVHLFFC 121

Query: 468  QLDLISNGDVVEAKELDSEWLSEPSHSKYSNG---------------------------- 527
            +L L+  G + E++ +++  L+E +  K SNG                            
Sbjct: 122  RLKLLDYGLLNESEMVENVSLTE-AIIKNSNGTPLEDGSDSEDSGLGHDDIAKDAATLMR 181

Query: 528  -------------RQNMQ-PGKWTSLQFSEAISVVNKFLK--PKQRECKNCGAKNPKISR 587
                         RQN     + T+L   E   VV  F      +++C NC + +P   +
Sbjct: 182  IRDEFVAKSIADSRQNAHIDAQLTTLLLHERKKVVRAFYHAISSRKQCDNCQSFSPNFRK 241

Query: 588  PTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFSHTTVINTSEG-DAF 647
               G+  +  +P + K    +     +         S +  +T+  H    +  EG D  
Sbjct: 242  E--GFAKIFEIPLSGKNLQFMEQTGKIR--------SDVLRDTSKKH----HEDEGYDGD 301

Query: 648  DDTATKAPTE--DSEEVPPEVFMQKNFS-----SGHLMPSEVKVIMRQLWKNEATLCSFI 707
             D++ ++  E  D  E  P     K+ S     + ++  +EV+  +R+L+  E  +   +
Sbjct: 302  SDSSNESEVEGIDLFEEDPNPLKNKSKSPIAHGAKYMTSTEVRNHLRRLFVKENVV---L 361

Query: 708  SDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGN 767
            S +     GK A   MFFL+N+ +PP +FRP +K GD V E+ Q  LL ++LQS+I + +
Sbjct: 362  SRLYAHKRGKPASADMFFLQNIAVPPTRFRPASKMGDEVHENIQNELLTRILQSSIQIAS 421

Query: 768  ------AHANKSE----------HSKIVRLWMDLQQSVNVLFDSK---TAAGQ-KDISVG 827
                     N  E             ++  ++ LQ  VN L DS    ++ GQ + +  G
Sbjct: 422  LSKDSTVEVNPDEKEGLERRSRAFELLINAFVQLQHDVNSLIDSNRNPSSGGQSRTVPPG 481

Query: 828  ICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWN 887
            I Q+LEKKEG+FR+ MMGKRVN+A RSVISPDP +  NEIG+PP FA +L+YPE VT +N
Sbjct: 482  IKQILEKKEGLFRKHMMGKRVNYAARSVISPDPNIETNEIGVPPVFATKLTYPEPVTLYN 541

Query: 888  VQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGD 947
              ++RNA+INGP   PGA+H  ++  T+   +  + + R +++ +L + +  ++   S  
Sbjct: 542  FNEMRNAVINGPHKWPGASHIQNEDGTLISLMPLTIEQRTALANQLLTPQSNLI---SSP 601

Query: 948  YEFE-----GKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTY 1007
            Y +       K V RH+++GD++++NRQPTLHKPS+MAH  R+L GEKTIRMHYANC++Y
Sbjct: 602  YSYSRLINTNKKVYRHVRNGDMLILNRQPTLHKPSMMAHKARILPGEKTIRMHYANCNSY 661

Query: 1008 NADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKD 1067
            NADFDGDEMN+HFPQ   +R+EA  I N ++QY+ PTSG+P+R LIQDH++  V LT KD
Sbjct: 662  NADFDGDEMNMHFPQSTNARSEAQFIANTDSQYLVPTSGDPLRGLIQDHVVMGVWLTCKD 721

Query: 1068 TFLNFDEFSQLLYSSGISTSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQ 1127
            TF   DE+ QLL+            + KP +          +  + PAI +P   WTGKQ
Sbjct: 722  TFYTRDEYQQLLF-----------QALKPDE----TGMYGRIKTLPPAIQRPGIYWTGKQ 781

Query: 1128 VVTALLEHITRGSPPFCVEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRL 1187
            +++++L ++     P                    N  SK KV                 
Sbjct: 782  IISSVLLNLKPSDRPGL------------------NLKSKAKVP---------------- 841

Query: 1188 GKSEVPDEGNSKKKEYSKLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFG--DYGLVHTV 1247
            GK   PD                    ++ S+L    EL+ G++DK+ FG   +GLVH+V
Sbjct: 842  GKYWSPDS-------------------EEGSVLFDDGELLCGILDKSSFGASAFGLVHSV 901

Query: 1248 HELYGSNTAGLLLSVMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQV 1307
            HELYG + AG LLSV+SRLFT + QM GFTC +DDL L E  D  R + L+  +  G + 
Sbjct: 902  HELYGPDIAGRLLSVLSRLFTAYAQMRGFTCRMDDLRLDEQGDNWRRQLLENGKSFGLEA 961

Query: 1308 HLGFLKVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLS 1367
               ++ +     +    L  N+E+   D  +  L  LD  M  ++N  T  S ++   + 
Sbjct: 962  ASEYVGLSTDSPI--ALLNANLEEVYRD--DEKLQGLDAAMKGKMNGLT--SSIINKCIP 1021

Query: 1368 EGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWD 1427
            +GLL     N +  MT SGAKG   N  QIS  LGQQ+LEG+RVP MVSGK+LP F  ++
Sbjct: 1022 DGLLTKFPYNHMQTMTVSGAKGSNVNVSQISCLLGQQELEGRRVPLMVSGKSLPSFVPYE 1081

Query: 1428 WASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKIC 1487
             ++++GGFI  RFLTG+ PQEYYFHCMAGREGL+DTAVKTSRSGYLQRCL+K++E L + 
Sbjct: 1082 TSAKSGGFIASRFLTGIAPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLMKHLEGLCVQ 1141

Query: 1488 YDHTVRDADGSIIQFQYGEDGIDVHKTAFITKFEALVANRDMLYQ--------------- 1547
            YDHTVRD+DGSI+QF YGED +DV K   +T+FE    N   L Q               
Sbjct: 1142 YDHTVRDSDGSIVQFHYGEDSLDVTKQKHLTQFEFSAKNYKSLIQKYKVKSVLSAVDSET 1201

Query: 1548 ------KSHHQLGKYNIYINELP--------SALQEKAEVIYNSFSKDKA---------- 1607
                  K+  +  KY+  +++ P        S   ++A   Y   + DK           
Sbjct: 1202 ASSYAKKALKKPYKYDPVLDKYPPSRYLGSVSEKFQRAVDEYTQKNPDKLIASKKESKLD 1261

Query: 1608 PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL 1667
              L+ +  F  L++ +Y  SL  PGE VGVLA+QSIGEPSTQMTLNTFH AG G  NVTL
Sbjct: 1262 DSLLNESKFKALMQLRYQQSLVDPGESVGVLASQSIGEPSTQMTLNTFHFAGFGAKNVTL 1321

Query: 1668 GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF 1727
            GIPRL+EI+MTAS +I+TP MT  L DG S   A     ++ K+ +++++  + VT    
Sbjct: 1322 GIPRLREIIMTASANIQTPTMTLRLNDGVSDKRASAFCKEVNKLVLSEVVRQVRVTEKIS 1381

Query: 1728 SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI 1787
                 E    Y + +  Y  +       V  E++E      F++           +L+RI
Sbjct: 1382 GQGSDEQSKTYAIRLDLYSRDEYQDEYGVLQEEIESTFSNRFLK-----------ILNRI 1441

Query: 1788 NGIKNFVPDSQSQGSSERDEV------SSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKL 1847
              IK+++  S+ + S  +D+       +    E+ D+    G   +A ED   D   +K+
Sbjct: 1442 --IKSYLAKSKQRKSGGKDDTVPEVGQALKPLEDIDEAPIEGRAQEALEDEDNDATNEKM 1501

Query: 1848 --RATDEMDYE--DDSDE------ELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDST 1907
              R+     YE  D++D+      + + K      + E D+G +   +++ + D  +   
Sbjct: 1502 VSRSKQHASYEGPDEADKVALRQLKGSNKVEDVNMDEEEDEGFK---SDESVSDFKERKL 1561

Query: 1908 SENQTEITDVSKSNLKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFAN 1967
             E Q  ++   +  L+ KT K      K         D+D   +V  +    E+ F   N
Sbjct: 1562 LEKQNTVSISERRELQLKTAKEILSNCKHL-------DFD---YVNGEWATVELVFPI-N 1621

Query: 1968 EPHILLTQVAQKTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIP 2027
               +L+  + +K   +  I     I RC                     K      + +P
Sbjct: 1622 TEKLLMVSLVEKACSETVIHEIPGITRC-------------------FSKPPDSALDTVP 1681

Query: 2028 AVQTTGVDFRMLWELQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISV 2038
             V T GV+ + +WE  +E+ +  IY+NDI A+L  YGVEAAR  ++ E+ ++F  YGI+V
Sbjct: 1682 KVITEGVNLKAIWEFYNEISMNDIYTNDIAAILRIYGVEAARNAIVHEVSSVFGVYGIAV 1683

BLAST of Moc05g28010 vs. ExPASy Swiss-Prot
Match: Q86H36 (DNA-directed RNA polymerase I subunit rpa1 OS=Dictyostelium discoideum OX=44689 GN=polr1a PE=3 SV=1)

HSP 1 Score: 908.3 bits (2346), Expect = 1.6e-262
Identity = 611/1777 (34.38%), Postives = 919/1777 (51.72%), Query Frame = 0

Query: 355  ESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKSCGQ 414
            E + +V+F F T ++VRK S  ++      D +G PV GGL+DPA+G       C +C  
Sbjct: 11   EEISSVSFQFYTSDDVRKLSVKQIVEIESFDMLGGPVPGGLHDPALGPTGPAERCATCSL 70

Query: 415  RPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQLDLISN 474
              + CPGH GHI+L  P YNP+ F  +  +L+  CF CHHF+ G+  + + + +L L+  
Sbjct: 71   DFIECPGHFGHIELAIPCYNPVSFQTIFKLLKNKCFHCHHFKHGKPIINQFIEELTLLFK 130

Query: 475  GDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQRECKNC 534
            GDVV+A+ L    +    + +   G+ N +  +      S++  +     K   +   + 
Sbjct: 131  GDVVKARNLRERNVLLRGYEEKKKGKSNEEGEEVMESDESDSDKMDTDENKTNGKIICD- 190

Query: 535  GAKNPK----------------ISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEG 594
            G  N K                + +  FG  +   +P  +                GA  
Sbjct: 191  GVFNAKEIYSGKATHIEDFKREVFKEFFGSFSGYAIPCGN---------------CGAYS 250

Query: 595  ISSLEEETTFSHTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVK 654
                  + + S   ++   +  A  ++A K PT  S         ++        P EV 
Sbjct: 251  PRLRNGDASKSKLFIMPLHDKYATKNSAIKLPTNFSS------VKEQTEHGTWFAPWEVL 310

Query: 655  VIMRQLWKNEATLCS-----FISDIQHQGHGKKAGHSMF---------FLENVLIPPIKF 714
              M++L++NE  +        +  + ++G  KK     F         F+    + P ++
Sbjct: 311  DNMKKLFENEKEILDMLLGHLVPIVTNKGGAKKNVGRQFTKESNVDSLFMRVFPVTPARY 370

Query: 715  RPPAKGGDSVMEHPQT------VLLNKVLQSNISLGNAHANKSEHSKIVRLWMDLQQSVN 774
            RPP        EHPQ       V  NK+++ +I  G   A       +V    DLQ  VN
Sbjct: 371  RPPNFVNGRRSEHPQNSHYKGMVKSNKMIRQSIDAGEGKA-----KFLVNSVCDLQMHVN 430

Query: 775  VLFD-SKTAAGQKDISVGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 834
             ++D SK+ +   +++ GI Q+LEKKEG+FR+ MMGKRVN+A R+VISPD  L  NE+G+
Sbjct: 431  NMYDNSKSNSNTNEVANGIKQILEKKEGLFRKHMMGKRVNYAARTVISPDISLETNEMGV 490

Query: 835  PPYFALRLSYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISI 894
            P YFA  L++P+ VT++N  +L  A+INGPE +PGA    D+   +    K S++ RI++
Sbjct: 491  PQYFAKTLTFPQPVTSFNYNQLAQAVINGPEQYPGANFIEDENGHLINLSKESQEKRIAL 550

Query: 895  SRKLPSS-----RGVVVDQGSGDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVR 954
            S+ L +S     RGV             K V RHL  GD VL NRQPTLHKP IM H V+
Sbjct: 551  SKTLLTSHPHAPRGV------------NKKVYRHLLSGDYVLANRQPTLHKPGIMGHRVK 610

Query: 955  VL-KGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEP 1014
            VL K EKT+RMHY+NCSTYNADFDGDEMN+HFPQ  ++ AE   I   N QY+ P +G P
Sbjct: 611  VLGKNEKTLRMHYSNCSTYNADFDGDEMNIHFPQSLLASAEIREICANNYQYLVPRNGAP 670

Query: 1015 IRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSS--GISTSRPCASSEKPGQKVFTLDFE 1074
            +R LIQDHI++ VLLTK+DT     +F  +LY+S   ++T  P  +              
Sbjct: 671  LRGLIQDHILTGVLLTKRDTLFTKADFQAILYASCWSVNTKHPIVTPP------------ 730

Query: 1075 AEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVEKDVKIPRGFFKCRHTGNNSS 1134
                   P I KP PLW+GKQ+++A L  +T G  P  +E   KIP              
Sbjct: 731  -------PCILKPVPLWSGKQLISAALNQLTIGRAPLNLEAPSKIP-------------- 790

Query: 1135 KVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKLDKLKAEHLDDDSLLIFKNEL 1194
                         + W    L                        E   D  ++I +NE+
Sbjct: 791  ------------TKMWGTKGL------------------------EITRDSHVIIRQNEM 850

Query: 1195 VRGVIDKAQFG--DYGLVHTVHELYGSNTAGLLLSVMSRLFTVFLQMHGFTCGVDDLLLL 1254
            V G++DK  FG   YGLVHT +ELY  + AG LL+++ R+FT +LQ  GFTCGVDDLL+ 
Sbjct: 851  VAGILDKGHFGASSYGLVHTCYELYDPDVAGSLLTLLGRMFTNYLQSRGFTCGVDDLLM- 910

Query: 1255 ECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDR 1314
               +KE + +++  +K  E+ +    K  D  K D    +    K +    E  +  LD 
Sbjct: 911  --KNKEEKFRVETLKKANEEGYTVAAKFADLSKYDEQKARDFFSKAL--QSEREVARLDG 970

Query: 1315 KMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQL 1374
             +   LN+ T  SKV+  L+  G  KP  KN  SLMT SGAKG   NF Q+S  LGQQ+L
Sbjct: 971  LLKKGLNQYT--SKVIDTLIPGGQQKPFPKNNFSLMTVSGAKGSVVNFSQVSCLLGQQEL 1030

Query: 1375 EGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVK 1434
            EGKRVPRMVSGKTLP F ++D ++RAGGF++DRFLTG+RPQ+Y+FHCMAGREGL+DTAVK
Sbjct: 1031 EGKRVPRMVSGKTLPSFQAYDASARAGGFVMDRFLTGVRPQDYFFHCMAGREGLIDTAVK 1090

Query: 1435 TSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDGIDVHKTAFITKFEALVAN 1494
            TSRSGYLQRCLIK++E L + YD+TVR++DGS+IQF YGED +++ KT ++TKF  +  N
Sbjct: 1091 TSRSGYLQRCLIKHLEGLSVQYDNTVRESDGSVIQFNYGEDSLEIGKTPYLTKFPIIAEN 1150

Query: 1495 ----------RDMLYQKSHHQLGKYN---------------------------IYINELP 1554
                        ++ Q  + ++ +YN                            ++N+L 
Sbjct: 1151 YELFKSQFPMEQLIEQLKNQEVVEYNRSIKTQPELDPVMSKFNPSSDLGCVSESFMNQLN 1210

Query: 1555 SALQEKAEVIYNSFSKDKAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPST 1614
              ++   + +  + S     G + + DF  L+   Y  S+  PGE VG+L AQSIGEPST
Sbjct: 1211 HYIESNPQKLIKTTS--NRDGKINEKDFRNLMYLYYSRSMVSPGESVGLLCAQSIGEPST 1270

Query: 1615 QMTLNTFHHAGRGEMNVTLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKL 1674
            QMTLNTFH AGRGE NVTLGIPRL+E++MTA+    TP+M   + D  +    + +A  L
Sbjct: 1271 QMTLNTFHLAGRGEANVTLGIPRLRELIMTATTKPITPLMEFQINDSTNKVETEKMAKYL 1330

Query: 1675 KKITVADIIESMEVTVVPFSVRKREICSIYKLEIKFYP-LENNPQHGHVSSEDLEEIL-E 1734
            + + ++DII+  ++TV  +    ++    Y +EI+F P L+       +  + L ++  E
Sbjct: 1331 EILKLSDIIK--DITVQEYF---QDTNRNYDIEIEFIPTLQQVLSLHRIKEKQLNKLFGE 1390

Query: 1735 FVFVRELEDSIQNEMILLSRINGIKNFVPDSQSQGSS--ERDEVSSSQHEENDDDDNVGN 1794
            F  V + +   Q ++ + +   G+      S+ +GS   E D ++ +  +   +DD   N
Sbjct: 1391 FNKVIKRQVKSQGKLKVNNGDIGL-----GSKVRGSDLVEDDSLTINDDDAPANDDTTNN 1450

Query: 1795 DVDAAEDLGFDMKKQKLRATDEMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIM 1854
            D + ++       K+        D +  + +  N K  +  +E   ++ +E         
Sbjct: 1451 DENTSQQQPSSQNKKSKSKVITQDDDSVAAKSKNKKKQNVNYEDGEEEAEE--------- 1510

Query: 1855 DIAKDS-TSENQTEITDVSKSNLKGKTPKTANKKKKRA----KLEFSRKDYDRAIFVAAK 1914
               KDS   E++ E +D  KS++   + + +N +   +     +EF +K     I VA  
Sbjct: 1511 ---KDSDEGESEAEESD-DKSDVDSDSDEISNSRSSNSFSDESIEFDQKKLTFTISVA-- 1570

Query: 1915 GNHFEVHFKFANEPHILLTQVAQKTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKER 1974
                      ++   +L+  + +  A K  ++S   I RC     + G   ++       
Sbjct: 1571 ----------SDSKKVLMLGIVETEASKFVLKSCKGITRCFVNEKQVGGKTHY------- 1615

Query: 1975 KKMKLEEKEKIPAVQTTGVDFRMLWELQDELDVRYIYSNDIHAMLETYGVEAARETVMRE 2034
                        ++Q+ GV+   ++EL+D+L +  IY+NDI+A+L+ YGVEA R+ V  E
Sbjct: 1631 ------------SIQSEGVNLSEIFELRDKLKIDEIYTNDIYAILQKYGVEACRQAVTSE 1615

Query: 2035 IQNIFSSYGISVNIRHLTLVADYMTHSGGYRPMSRLGGIAESISPFSRMTFETASKFIVQ 2039
            I N+F++YGISV+ RHL L+ DYMT  GGYR ++R+ GI  + SPF +M+FET   F+ +
Sbjct: 1691 ISNVFAAYGISVDKRHLILLGDYMTFEGGYRALNRI-GIENNTSPFQKMSFETTFSFLSK 1615

BLAST of Moc05g28010 vs. ExPASy Swiss-Prot
Match: P10964 (DNA-directed RNA polymerase I subunit RPA190 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPA190 PE=1 SV=2)

HSP 1 Score: 902.5 bits (2331), Expect = 8.6e-261
Identity = 605/1810 (33.43%), Postives = 924/1810 (51.05%), Query Frame = 0

Query: 348  DITQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTT 407
            DI++     + +V F  +T +E+R  SA ++T P +LD +G PVSGGLYD A+G+     
Sbjct: 2    DISKPVGSEITSVDFGILTAKEIRNLSAKQITNPTVLDNLGHPVSGGLYDLALGAF-LRN 61

Query: 408  LCKSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVS 467
            LC +CG    +CPGH GHI+L  P YNPL F  L+  L+ +C  CHHFR    +V +   
Sbjct: 62   LCSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRASCLFCHHFRLKSVEVHRYAC 121

Query: 468  QLDLISNGDVVEAKELDSEWLSEPSHSKY------------------------------- 527
            +L L+  G + E+ +LD   L   + S Y                               
Sbjct: 122  KLRLLQYGLIDESYKLDEITLGSLNSSMYTDDEAIEDNEDEMDGEGSKQSKDISSTLLNE 181

Query: 528  -----------------SNGRQNMQPGKWTSLQFSEAISVVNKFLKP--KQRECKNCGAK 587
                             S+GR   + G +T+    E   +V++F K    + +C NCG  
Sbjct: 182  LKSKRSEYVDMAIAKALSDGR-TTERGSFTATVNDERKKLVHEFHKKLLSRGKCDNCGMF 241

Query: 588  NPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFSHTTVINTS 647
            +PK  +  F  +  + L       N ++G     +I   +    L+            ++
Sbjct: 242  SPKFRKDGFTKIFETALNEKQITNNRVKGFIRQDMIKKQKQAKKLD-----------GSN 301

Query: 648  EGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEATLCSFISD 707
            E  A D        E+S +V      +    S +++ +EVK I+  +++ E  +  ++  
Sbjct: 302  EASAND--------EESFDVGRNPTTRPKTGSTYILSTEVKNILDTVFRKEQCVLQYVFH 361

Query: 708  IQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNAH 767
             +     K      FF++ +++PP +FR P+K G+ V E+ Q  LL+KVL +++ + + +
Sbjct: 362  SRPNLSRKLVKADSFFMDVLVVPPTRFRLPSKLGEEVHENSQNQLLSKVLTTSLLIRDLN 421

Query: 768  ANKSE--------------HSKIVRLWMDLQQSVNVLFDSKTAAGQKDISV---GICQLL 827
             + S+               S+++  ++ +Q  VN   DS  A G+    V   G+ Q L
Sbjct: 422  DDLSKLQKDKVSLEDRRVIFSRLMNAFVTIQNDVNAFIDSTKAQGRTSGKVPIPGVKQAL 481

Query: 828  EKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLR 887
            EKKEG+FR+ MMGKRVN+A RSVISPDP +  NEIG+PP FA++L+YPE VTA+N+ +LR
Sbjct: 482  EKKEGLFRKHMMGKRVNYAARSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELR 541

Query: 888  NAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEG 947
             A+INGP+  PGAT   ++  ++   +  S + R +++ +L      +    +       
Sbjct: 542  QAVINGPDKWPGATQIQNEDGSLVSLIGMSVEQRKALANQL------LTPSSNVSTHTLN 601

Query: 948  KIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMN 1007
            K V RH+++ D+VL+NRQPTLHK S+M H VRVL  EKT+R+HYAN   YNADFDGDEMN
Sbjct: 602  KKVYRHIKNRDVVLMNRQPTLHKASMMGHKVRVLPNEKTLRLHYANTGAYNADFDGDEMN 661

Query: 1008 VHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQ 1067
            +HFPQ+E +RAEA N+ N ++QY+ PTSG P+R LIQDHI + V LT KD+F   +++ Q
Sbjct: 662  MHFPQNENARAEALNLANTDSQYLTPTSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQ 721

Query: 1068 LLYSSGISTSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHIT 1127
             +Y       RP         K+ TL          P I+KP PLWTGKQ++T +L ++T
Sbjct: 722  YIY----GCIRP-EDGHTTRSKIVTLP---------PTIFKPYPLWTGKQIITTVLLNVT 781

Query: 1128 RGSPPFCVEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGN 1187
                P                                          N + K+++     
Sbjct: 782  PPDMP----------------------------------------GINLISKNKI----- 841

Query: 1188 SKKKEYSKLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFG--DYGLVHTVHELYGSNTAG 1247
              K EY     L+ E L  D  L+       G++DK+Q+G   YG+VH++HE+YG   A 
Sbjct: 842  --KNEYWGKGSLENEVLFKDGALLC------GILDKSQYGASKYGIVHSLHEVYGPEVAA 901

Query: 1248 LLLSVMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDG 1307
             +LSV+ RLFT ++    FTCG+DDL L    +K R + L+     G +       +   
Sbjct: 902  KVLSVLGRLFTNYITATAFTCGMDDLRLTAEGNKWRTDILKTSVDTGREAAAEVTNLDKD 961

Query: 1308 EKLDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKN 1367
               D   L   +++ + DN +  +  LD   +S++N  T  S+V+   + +G +K    N
Sbjct: 962  TPADDPELLKRLQEILRDNNKSGI--LDAVTSSKVNAIT--SQVVSKCVPDGTMKKFPCN 1021

Query: 1368 CISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIV 1427
             +  M  SGAKG   N  QI   LGQQ LEG+RVP MVSGKTLP F  ++  + AGG++ 
Sbjct: 1022 SMQAMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVMVSGKTLPSFKPYETDAMAGGYVK 1081

Query: 1428 DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADG 1487
             RF +G++PQEYYFHCMAGREGL+DTAVKTSRSGYLQRCL K +E + + YD+++RDADG
Sbjct: 1082 GRFYSGIKPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLTKQLEGVHVSYDNSIRDADG 1141

Query: 1488 SIIQFQYGEDGIDVHKTAFITKFE----------------ALVANRD-----------ML 1547
            +++QF YG D ID+ K + +T+FE                AL+ + D           + 
Sbjct: 1142 TLVQFMYGGDAIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLK 1201

Query: 1548 YQKSHHQ-------------LGKYN--IYINELPSALQEKAEVIYNSFSK-DKAPGLVQK 1607
            Y+K H +             L KYN   Y+  +    Q+K E   +  SK  K+   V +
Sbjct: 1202 YRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFKSSDGVNE 1261

Query: 1608 DDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQ 1667
              F  L++ KY+ SL  PGE VG++A+QS+GEPSTQMTLNTFH AG G  NVTLGIPRL+
Sbjct: 1262 KKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQMTLNTFHFAGHGAANVTLGIPRLR 1321

Query: 1668 EILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV--PFSVRK 1727
            EI+MTAS  IKTP MT P+ +  S + A      + K+ ++++I+ + VT      +   
Sbjct: 1322 EIVMTASAAIKTPQMTLPIWNDVSDEQADTFCKSISKVLLSEVIDKVIVTETTGTSNTAG 1381

Query: 1728 REICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRINGIK 1787
                  Y + ++F+      +   VS E+L+ ++   F+  LE +I  E+    R  G  
Sbjct: 1382 GNAARSYVIHMRFFDNNEYSEEYDVSKEELQNVISNQFIHLLEAAIVKEIKKQKRTTGPD 1441

Query: 1788 NFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEMDYED 1847
              V   + Q        +S + EE++D++                  Q  + T +    D
Sbjct: 1442 IGVAVPRLQTDVANSSSNSKRLEEDNDEE------------------QSHKKTKQAVSYD 1501

Query: 1848 DSDEELNAKAPSAGFESEVDQGDEVEITNDDI-MDIAKDSTSENQTEITDVSKSNLKGKT 1907
            + DE+            E++   E E ++D+  +D  K+S S+++ E  D+++   K   
Sbjct: 1502 EPDED------------EIETMREAEKSSDEEGIDSDKESDSDSEDEDVDMNEQINKSIV 1561

Query: 1908 PKTANKKKKRAKLEFSRKDYDRAI----FVAAKGNHFEVHFKFANEPH-ILLTQVAQKTA 1967
                N  K +   + +   + R I    F    G   E   + A +   +L+  + ++  
Sbjct: 1562 EANNNMNKVQRDRQSAIISHHRFITKYNFDDESGKWCEFKLELAADTEKLLMVNIVEEIC 1621

Query: 1968 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 2027
            +K  I+    I RC     + G+ +                      + T GV+F+ +W+
Sbjct: 1622 RKSIIRQIPHIDRCVHPEPENGKRV----------------------LVTEGVNFQAMWD 1660

Query: 2028 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 2038
             +  +DV  I SND+ A+L+TYGVEAAR T++ EI N+FS Y ISV+ RHL L+AD MT 
Sbjct: 1682 QEAFIDVDGITSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTR 1660

BLAST of Moc05g28010 vs. ExPASy Swiss-Prot
Match: O95602 (DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens OX=9606 GN=POLR1A PE=1 SV=2)

HSP 1 Score: 852.8 bits (2202), Expect = 7.9e-246
Identity = 597/1835 (32.53%), Postives = 926/1835 (50.46%), Query Frame = 0

Query: 357  VEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKSCGQRP 416
            ++ ++F   + EE++K S   +T P  LD +G P + GLYD A+G  D   +C +C Q  
Sbjct: 12   LQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADSKEVCSTCVQDF 71

Query: 417  LYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQLDLISNGD 476
              C GH GHI+L   VYNPLLF  L+ +L+ +C +CH      + +   + QL ++  G 
Sbjct: 72   SNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLLCQLRVLEVGA 131

Query: 477  VVEAKELD---SEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQRECKN 536
            +    EL+   + +L E      S  R+ ++       Q++  I V N  L  +    KN
Sbjct: 132  LQAVYELERILNRFLEENPDPSASEIREELE-------QYTTEI-VQNNLLGSQGAHVKN 191

Query: 537  -CGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFSHTT 596
             C +K+  I+     W        AH  A     CK    +   E  S L    T +   
Sbjct: 192  VCESKSKLIA---LFW-------KAHMNAKRCPHCKTGRSVVRKEHNSKL----TITFPA 251

Query: 597  VINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEATLC 656
            +++ + G            +DSE  P  +   +    G+L P+  +  +  LWKNE    
Sbjct: 252  MVHRTAGQ-----------KDSE--PLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFL 311

Query: 657  SFI-SDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNI 716
            +++ S +   G   +   S+FFL+ +++PP ++RP ++ GD +  + QTV L  V++  +
Sbjct: 312  NYLFSGMDDDGMESRFNPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVV 371

Query: 717  SLGNAHA------------------------------------NKSEHSKIVRLWMDLQQ 776
             +    A                                     +S   K+  +W+ LQ 
Sbjct: 372  LIRKLLALMAQEQKLPEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQS 431

Query: 777  SVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEI 836
             VN++FDS+      D   GI Q+LEKKEG+FR+ MMGKRV++A RSVI PD Y+  NEI
Sbjct: 432  HVNIVFDSEMDKLMMDKYPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEI 491

Query: 837  GIPPYFALRLSYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRI 896
            GIP  FA +L+YP+ VT WNVQ+LR A+INGP  HPGA+  I++  +           R 
Sbjct: 492  GIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQRE 551

Query: 897  SISRK-LPSSRGVVVDQGSGDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 956
            +++++ L  + G    QG+       KIV RH+++GDI+L+NRQPTLH+PSI AH  R+L
Sbjct: 552  AVAKQLLTPATGAPKPQGT-------KIVCRHVKNGDILLLNRQPTLHRPSIQAHRARIL 611

Query: 957  KGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRA 1016
              EK +R+HYANC  YNADFDGDEMN HFPQ E+ RAEAY +   + QY+ P  G+P+  
Sbjct: 612  PEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAG 671

Query: 1017 LIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSRPCASSEKPGQKVFTLDFEAEMLP 1076
            LIQDH++S   +T +  F   + + +L+Y            ++K G+          +  
Sbjct: 672  LIQDHMVSGASMTTRGCFFTREHYMELVYR---------GLTDKVGR----------VKL 731

Query: 1077 VLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVEKDVKIPRGFFKCRHTGNNSSKVKVV 1136
            + P+I KP PLWTGKQVV+ LL +I              IP          N S K K+ 
Sbjct: 732  LSPSILKPFPLWTGKQVVSTLLINI--------------IPEDHIPL----NLSGKAKIT 791

Query: 1137 DGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKLDKLKAEHLDDDSLLIFKNELVRGVI 1196
                            GK+ V +   S       +     + + +  ++I + EL+ GV+
Sbjct: 792  ----------------GKAWVKETPRS-------VPGFNPDSMCESQVIIREGELLCGVL 851

Query: 1197 DKAQFGD--YGLVHTVHELYGSNTAGLLLSVMSRLFTVFLQMH-GFTCGVDDLLLLECMD 1256
            DKA +G   YGLVH  +E+YG  T+G +L+ ++RLFT +LQ++ GFT GV+D+L+    D
Sbjct: 852  DKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKAD 911

Query: 1257 KEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTS 1316
             +R+  ++     G Q     L + +    D   ++   +       +     +D K   
Sbjct: 912  VKRQRIIEESTHCGPQAVRAALNLPEAASYD--EVRGKWQDAHLGKDQRDFNMIDLKFKE 971

Query: 1317 QLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKR 1376
            ++N    ++++ K  +  GL +   +N + +M  SGAKG T N  QIS  LGQ +LEG+R
Sbjct: 972  EVNHY--SNEINKACMPFGLHRQFPENSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRR 1031

Query: 1377 VPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 1436
             P M SGK+LPCF  +++  RAGGF+  RFLTG++P E++FHCMAGREGLVDTAVKTSRS
Sbjct: 1032 PPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRS 1091

Query: 1437 GYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDGIDVHKTAFI--TKFEALVANRD 1496
            GYLQRC+IK++E L + YD TVRD+DGS++QF YGEDG+D+ KT F+   +F  L +N +
Sbjct: 1092 GYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYE 1151

Query: 1497 MLYQKSH-HQL------------------------------GKYNIYINELPSAL----- 1556
            ++ +  H H++                              G +  Y  ++  A+     
Sbjct: 1152 VIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQKIQEAVKALKL 1211

Query: 1557 ------------QEKAEVIY-------NSFSKDKA----PGL-----------------V 1616
                        QE   + Y         + K  A    P L                  
Sbjct: 1212 ESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFET 1271

Query: 1617 QKDDFFR----------------------LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQ 1676
            + DD+ +                      LL+ K+  SL +PGE VG+LAAQSIGEPSTQ
Sbjct: 1272 KVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQ 1331

Query: 1677 MTLNTFHHAGRGEMNVTLGIPRLQEILMTASHDIKTPIMTCP-LRDGYSMDYAKCLANKL 1736
            MTLNTFH AGRGEMNVTLGIPRL+EILM AS +IKTP+M+ P L    ++   K L  +L
Sbjct: 1332 MTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQL 1391

Query: 1737 KKITVADIIESMEVTVVPFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFV 1796
             ++ + ++++ ++V        K+    +Y+L  +F P     Q   +  ED+   +E  
Sbjct: 1392 TRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETR 1451

Query: 1797 FVRELEDSIQ---NEMILLSRINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGND 1856
            F + L +SI+   N+      +N  +    D  + G     E+  S+ E+  D++  G+ 
Sbjct: 1452 FFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNAG-----ELGRSRGEQEGDEEEEGHI 1511

Query: 1857 VDA-AEDLGFDMK--KQKLRATDEMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDD 1916
            VDA AE+   D    K+K +  +E+DYE + +EE          E E +  ++++   + 
Sbjct: 1512 VDAEAEEGDADASDAKRKEKQEEEVDYESEEEEER---------EGEENDDEDMQEERNP 1571

Query: 1917 IMDIAKDSTSENQTEITDVSKSNLKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNH 1976
              + A+  T E   E+   ++ +       T  +K   ++     +  +R +    + + 
Sbjct: 1572 HREGAR-KTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHP 1631

Query: 1977 FEVHFKFANEPHILLTQVAQKTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKE--RK 2036
            F   +++  E  +      +    K++   S  +     ++   G VIY    +      
Sbjct: 1632 FIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLV-----VSLAHGAVIYATKGITRCLLN 1691

Query: 2037 KMKLEEKEKIPAVQTTGVDFRMLWELQDELDVRYIYSNDIHAMLETYGVEAARETVMREI 2038
            +    + EK   + T G++   L++  + LD+R +YSNDIHA+  TYG+EAA   + +EI
Sbjct: 1692 ETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEI 1719

BLAST of Moc05g28010 vs. ExPASy TrEMBL
Match: A0A6J1DJ24 (DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC111021540 PE=3 SV=1)

HSP 1 Score: 3374.7 bits (8749), Expect = 0.0e+00
Identity = 1689/1690 (99.94%), Postives = 1690/1690 (100.00%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC
Sbjct: 5    TEGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL
Sbjct: 65   KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR
Sbjct: 125  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS
Sbjct: 185  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
            HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA
Sbjct: 245  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
            TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS
Sbjct: 305  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQ 769
            NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQ
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDISVGICQLLEKKEGMFRQ 424

Query: 770  KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPET 829
            KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPET
Sbjct: 425  KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPET 484

Query: 830  HPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQD 889
            HPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQD
Sbjct: 485  HPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQD 544

Query: 890  GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEIS 949
            GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEIS
Sbjct: 545  GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEIS 604

Query: 950  RAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIST 1009
            RAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIST
Sbjct: 605  RAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIST 664

Query: 1010 SRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVE 1069
            SRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVE
Sbjct: 665  SRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVE 724

Query: 1070 KDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKL 1129
            KDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKL
Sbjct: 725  KDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKL 784

Query: 1130 DKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFT 1189
            DKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFT
Sbjct: 785  DKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFT 844

Query: 1190 VFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLN 1249
            VFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLN
Sbjct: 845  VFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLN 904

Query: 1250 IEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAK 1309
            IEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAK
Sbjct: 905  IEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAK 964

Query: 1310 GGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQE 1369
            GGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQE
Sbjct: 965  GGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQE 1024

Query: 1370 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDG 1429
            YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDG
Sbjct: 1025 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDG 1084

Query: 1430 IDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKA 1489
            IDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKA
Sbjct: 1085 IDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKA 1144

Query: 1490 PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL 1549
            PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL
Sbjct: 1145 PGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTL 1204

Query: 1550 GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF 1609
            GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF
Sbjct: 1205 GIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPF 1264

Query: 1610 SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI 1669
            SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI
Sbjct: 1265 SVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRI 1324

Query: 1670 NGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEM 1729
            NGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEM
Sbjct: 1325 NGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEM 1384

Query: 1730 DYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLK 1789
            DYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLK
Sbjct: 1385 DYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLK 1444

Query: 1790 GKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQK 1849
            GKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQK
Sbjct: 1445 GKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQK 1504

Query: 1850 VSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQ 1909
            VSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQ
Sbjct: 1505 VSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQ 1564

Query: 1910 DELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSG 1969
            DELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSG
Sbjct: 1565 DELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSG 1624

Query: 1970 GYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTG 2029
            GYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTG
Sbjct: 1625 GYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTG 1684

Query: 2030 SFDLMQKIEV 2040
            SFDLMQKIEV
Sbjct: 1685 SFDLMQKIEV 1694

BLAST of Moc05g28010 vs. ExPASy TrEMBL
Match: A0A6J1FEE5 (DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC111444963 PE=3 SV=1)

HSP 1 Score: 3057.7 bits (7926), Expect = 0.0e+00
Identity = 1516/1692 (89.60%), Postives = 1604/1692 (94.80%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+AVAFSFMT++EVRKHSAVKVTAPILLD MGRPV+GGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKAVAFSFMTEDEVRKHSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLF+ILHN+LQRTCFSCHHFRAG SQVEKC SQL
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            +LI NGDVV+AKELDSE L+E S SK+SN  QNMQP KWTSLQFSEAIS VNKFLKPKQR
Sbjct: 125  ELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKI+RPTFGWL+M+GLPGAHKRANAIRGCKP SV SGAEGISS+EEE T  
Sbjct: 185  ECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEENTVP 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
             TTVIN SE D FDDTATKA  EDSEEV PE+F+ KNFS+GHL+PSEVK I+++LWKNEA
Sbjct: 245  QTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSAGHLLPSEVKHILKRLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
             LCSFISDIQHQG+G KAGHSMFFLE VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQS
Sbjct: 305  MLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMF 769
            NISLGNAHANKSEHSKIVRLWMDLQQS+NVLFDSKTA+  GQKD+SVGICQLLEKKEGMF
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMF 424

Query: 770  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGP 829
            RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGP
Sbjct: 425  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGP 484

Query: 830  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHL 889
            ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGS DYEFEGKIVNRHL
Sbjct: 485  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHL 544

Query: 890  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 949
            +DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE
Sbjct: 545  EDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 604

Query: 950  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGI 1009
            ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL FDEFSQLLYSSGI
Sbjct: 605  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGI 664

Query: 1010 STSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFC 1069
            STSRPCASSEKPGQK+F LDFE+EMLPVLPA+WKPEPLWTGKQVVTALL+HITRG+PPFC
Sbjct: 665  STSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFC 724

Query: 1070 VEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYS 1129
            VEKDVKIPRGFFK RHTGNNSSKVKV DGDKSKRKRTWN  +LGK EVPDEGNSK+ +YS
Sbjct: 725  VEKDVKIPRGFFKSRHTGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKRDDYS 784

Query: 1130 KLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRL 1189
            K DKLKAE LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAG+LLSVMSRL
Sbjct: 785  KFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRL 844

Query: 1190 FTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 1249
            FTV+LQMHGFTCGVDDLLL++CMDKERE+QLQICE IGEQVHLGFLKVKDGEKLDPM LQ
Sbjct: 845  FTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQ 904

Query: 1250 LNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 1309
            LNIEKTI +NGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV NCISLMTTSG
Sbjct: 905  LNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSG 964

Query: 1310 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRP 1369
            AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRP
Sbjct: 965  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 1024

Query: 1370 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGE 1429
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLK+ YDHTVRDADGSIIQF+YGE
Sbjct: 1025 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGE 1084

Query: 1430 DGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKD 1489
            DG+DVHK AFI KFEAL AN +M+YQKSHHQ   +N YINELPS LQEKAEVIYNSF+KD
Sbjct: 1085 DGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSFAKD 1144

Query: 1490 KAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1549
            KAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV
Sbjct: 1145 KAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1204

Query: 1550 TLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV 1609
            TLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVV
Sbjct: 1205 TLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVV 1264

Query: 1610 PFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLS 1669
            PFS RKREICSIYKLEI+FYPLE+NPQH HVSSEDLEEILEFVFVRELEDSIQNEM+LLS
Sbjct: 1265 PFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLS 1324

Query: 1670 RINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATD 1729
            RI+GIKNFVPDSQS+G SE D+VSSSQ EENDDDD+VGND+D AEDLGFDMKKQKLR TD
Sbjct: 1325 RISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTD 1384

Query: 1730 EMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSN 1789
            EMDYEDDS+EELN K PSAGFESEVDQGDE +ITNDD M+I KD+TSE+QTEI DVSKSN
Sbjct: 1385 EMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSN 1444

Query: 1790 LKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTA 1849
             KGKT KT+NKKKK AK EFSRKDYDRAIFV+AKGNHFEVHFKF NEPHILLTQ+AQ+TA
Sbjct: 1445 SKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTA 1504

Query: 1850 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 1909
            QKVSIQSSGKIIRCQQITCKEGQVIYHGN+ K RK +K EEKEK+PA+QTTGVDF+ LWE
Sbjct: 1505 QKVSIQSSGKIIRCQQITCKEGQVIYHGNDTKVRKNIKPEEKEKVPALQTTGVDFKTLWE 1564

Query: 1910 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 1969
            LQDELD RYIYSNDIHAML+TYGVEAARET++REI+NIFSSYGISVNIRHLTL+ADYMTH
Sbjct: 1565 LQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTH 1624

Query: 1970 SGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMG 2029
            SGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMG
Sbjct: 1625 SGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMG 1684

Query: 2030 TGSFDLMQKIEV 2040
            TGSFDLMQKI+V
Sbjct: 1685 TGSFDLMQKIDV 1695

BLAST of Moc05g28010 vs. ExPASy TrEMBL
Match: A0A6J1I5C4 (DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111470054 PE=3 SV=1)

HSP 1 Score: 3054.6 bits (7918), Expect = 0.0e+00
Identity = 1516/1692 (89.60%), Postives = 1603/1692 (94.74%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+AVAFSFMT++EVRK SAVKVTAPILLD MGRPV+GGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKAVAFSFMTEDEVRKLSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLF+ILHN+LQRTCFSCHHFRAG SQVEKC SQL
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQL 124

Query: 470  DLISNGDVVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQR 529
            +LI NGDVV+AKELDSE L+E S SK+SN  QNMQP KWTSLQFSEAIS VNKFLKPKQR
Sbjct: 125  ELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLKPKQR 184

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFS 589
            ECKNCGAKNPKI+RPTFGWL+M+GLPGAHKRANAIRGCKP SV SGAEGISS+EEE T  
Sbjct: 185  ECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEENTVP 244

Query: 590  HTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEA 649
             TTVIN SE D FDDTATKA  EDSEEV PE+F+ KNFS+ HL+PSEVK I+++LWKNEA
Sbjct: 245  QTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSTVHLLPSEVKHILKRLWKNEA 304

Query: 650  TLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQS 709
             LCSFISDIQHQG+G KAGHSMFFLE VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQS
Sbjct: 305  MLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQS 364

Query: 710  NISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMF 769
            NISLGNAHANKSEHSKIVRLWMDLQQS+NVLFDSKTA+  GQKD+SVGICQLLEKKEGMF
Sbjct: 365  NISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMF 424

Query: 770  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGP 829
            RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGP
Sbjct: 425  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGP 484

Query: 830  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHL 889
            ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGS DYEFEGKIVNRHL
Sbjct: 485  ETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHL 544

Query: 890  QDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 949
            +DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE
Sbjct: 545  EDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDE 604

Query: 950  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGI 1009
            ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL FDEFSQLLYSSGI
Sbjct: 605  ISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGI 664

Query: 1010 STSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFC 1069
            STSRPCASSEKPGQK+F LDFE+EMLPVLPA+WKPEPLWTGKQVVTALL+HITRG+PPFC
Sbjct: 665  STSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFC 724

Query: 1070 VEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYS 1129
            VEKDVKIPRGFFKCRHTGNNSSKVKV DGDKSKRKRTWN  +LGK EVPDEGNSKK +YS
Sbjct: 725  VEKDVKIPRGFFKCRHTGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKKDDYS 784

Query: 1130 KLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRL 1189
            K DKLKAE LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAG+LLSVMSRL
Sbjct: 785  KFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRL 844

Query: 1190 FTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 1249
            FTV+LQMHGFTCGVDDLLL++CMDKERE+QLQICE IGEQVHLGFLKVKDGEKLDPM LQ
Sbjct: 845  FTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQ 904

Query: 1250 LNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 1309
            LNIEKTI +NGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV NCISLMTTSG
Sbjct: 905  LNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSG 964

Query: 1310 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRP 1369
            AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRP
Sbjct: 965  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 1024

Query: 1370 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGE 1429
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLK+ YDHTVRDADGSIIQF+YGE
Sbjct: 1025 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGE 1084

Query: 1430 DGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKD 1489
            DG+DVHK AFI KFEAL AN +M+YQKSHHQ   +N YINELPS LQEKAEVIYNSF+KD
Sbjct: 1085 DGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSFAKD 1144

Query: 1490 KAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1549
            KAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV
Sbjct: 1145 KAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1204

Query: 1550 TLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVV 1609
            TLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVV
Sbjct: 1205 TLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVV 1264

Query: 1610 PFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLS 1669
            PFS RKREICSIYKLEI+FYPLE+NPQH HVSSEDLEEILEFVFVRELEDSIQNEM+LLS
Sbjct: 1265 PFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLS 1324

Query: 1670 RINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATD 1729
            RI+GIKNFVPDSQS+G SE D+VSSSQ EENDDDD+VGND+D AEDLGFDMKKQKLR TD
Sbjct: 1325 RISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTD 1384

Query: 1730 EMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSN 1789
            EMDYEDDS+EELN K PSAGFESEVDQGDE +ITNDD M+I KD+TSE+QT I DVSKSN
Sbjct: 1385 EMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTVIIDVSKSN 1444

Query: 1790 LKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTA 1849
             KGKT KT+NKKKK AK EFSRKDYDRAIFVAAKGNHFEVHFKF NEPHILLTQ+AQ+TA
Sbjct: 1445 SKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVAAKGNHFEVHFKFTNEPHILLTQIAQRTA 1504

Query: 1850 QKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWE 1909
            QKVSIQSSGKIIRCQQITCKEGQVIYHGN++K RK +K EEKEK+PA+QTTGVDF+ LWE
Sbjct: 1505 QKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWE 1564

Query: 1910 LQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTH 1969
            LQDELD RYIYSNDIHAML+TYGVEAARET++REI+NIFSSYGISVNIRHLTL+ADYMTH
Sbjct: 1565 LQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTH 1624

Query: 1970 SGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMG 2029
            SGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMG
Sbjct: 1625 SGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMG 1684

Query: 2030 TGSFDLMQKIEV 2040
            TGSFDLMQKI+V
Sbjct: 1685 TGSFDLMQKIDV 1695

BLAST of Moc05g28010 vs. ExPASy TrEMBL
Match: A0A5A7TQ71 (DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00270 PE=3 SV=1)

HSP 1 Score: 2925.2 bits (7582), Expect = 0.0e+00
Identity = 1461/1729 (84.50%), Postives = 1575/1729 (91.09%), Query Frame = 0

Query: 319  LKTKVVGVACHCHGSDHRGTDARFYLMFSDITQGASESVEAVAFSFMTDEEVRKHSAVKV 378
            ++ ++VGVA HCHGSDHRGT+ RF+        GASESV+ V FSFMT+ EVRKHSAVKV
Sbjct: 62   VEDRIVGVARHCHGSDHRGTNGRFFRSLIPSFVGASESVKVVTFSFMTNAEVRKHSAVKV 121

Query: 379  TAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKSCGQRPLYCPGHCGHIDLVSPVYNPLLF 438
            TAPILLDGMGRPVSGGLYDPAMGSLD+TTLCKSCGQRP YCPGHCGHIDLVSPVYNPLLF
Sbjct: 122  TAPILLDGMGRPVSGGLYDPAMGSLDETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLF 181

Query: 439  VILHNILQRTCFSCHHFRAGESQVEKCVSQLDLISNGDVVEAKELDSEWL-----SEPSH 498
            V LHN L+ TCFSCHHFRAGE  VEKC + L+LI +G+V +AKEL+ EWL     ++ SH
Sbjct: 182  VTLHNFLRCTCFSCHHFRAGEFMVEKCKTLLELILDGEVAKAKELEDEWLDSTSRTKSSH 241

Query: 499  SKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQRECKNCGAKNPKISRPTFGWLNMSG 558
            + Y+  R+N+QP  WTSLQFSEA+SVVN+FLKPKQ  CK CGAKNPKI++PTFGWL+  G
Sbjct: 242  AMYTYERKNVQPKTWTSLQFSEAMSVVNRFLKPKQSNCKYCGAKNPKITKPTFGWLHSKG 301

Query: 559  LPGAHKRANAIRGCKPVSVISGAEGISSLEEETTFSHTTVINTSEGDAFDDTATKAPTED 618
            L GAHKRANAIR  KPVSV SGAEG+SSLEEETT                   T+A  ED
Sbjct: 302  LTGAHKRANAIRRSKPVSVSSGAEGVSSLEEETT-------------------TEATVED 361

Query: 619  SEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEATLCSFISDIQHQGHGKKAGHSMFF 678
            SE+V PE+FMQKNFSSGHL+PSEVK I+++LWKNEA LCSFISDI  QG+G KAGHSMFF
Sbjct: 362  SEDVSPEIFMQKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQGNGNKAGHSMFF 421

Query: 679  LENVLIPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNAHANKSEHSKIVRLWMDL 738
            LE+VL+PPIKFRPPAKGGDS+MEHPQTVLLNKVLQSNISLGN HANK EHS+IVRLWMDL
Sbjct: 422  LESVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQSNISLGNGHANKLEHSRIVRLWMDL 481

Query: 739  QQSVNVLFDSKTAA--GQKDISVGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLA 798
            QQS+N+LFDSKTAA  G+KD S+GICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLA
Sbjct: 482  QQSINILFDSKTAAGPGKKDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLA 541

Query: 799  VNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSR 858
            VNEIGIPPYFALRL+YPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSR
Sbjct: 542  VNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSR 601

Query: 859  KSRISISRKLPSSRGVVVDQGSGDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVV 918
            KSRISISRKLPSSRGVVVDQG  DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVV
Sbjct: 602  KSRISISRKLPSSRGVVVDQGCDDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVV 661

Query: 919  RVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEP 978
            RVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEP
Sbjct: 662  RVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEP 721

Query: 979  IRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSRPCASSEKPGQKVFTLDFEAE 1038
            IRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTS+ CASSEKPGQK+FTLDF+AE
Sbjct: 722  IRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAE 781

Query: 1039 MLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCVEKDVKIPRGFFKCRHTGNNSSKV 1098
            MLPVLPA+WKPEPLWTGKQVVTALL+HIT+GSPPFCVEKDVKIPRGFFKCR  GNNSSKV
Sbjct: 782  MLPVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFCVEKDVKIPRGFFKCRDMGNNSSKV 841

Query: 1099 KVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSKLDKLKAEHLDDDSLLIFKNELVR 1158
            K+VDGDKSKRKRT NEN+L K EV DEGNSKKKEY+K+DKLKA  LDDDSLLIFKNELVR
Sbjct: 842  KMVDGDKSKRKRTMNENKLEKGEVLDEGNSKKKEYAKVDKLKAARLDDDSLLIFKNELVR 901

Query: 1159 GVIDKAQFGDYGLVHTVHELYGSNTAGLLLSVMSRLFTVFLQMHGFTCGVDDLLLLECMD 1218
            GVIDKAQFGDYGLVHTV ELYGS+TAGLLLSVMSRLFTVFLQ HGFTCGVDDLLL+ECMD
Sbjct: 902  GVIDKAQFGDYGLVHTVQELYGSSTAGLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMD 961

Query: 1219 KEREEQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTS 1278
            KERE+QLQICEKIGEQVHL FLKVKDGEKLDPMTLQLNIEKTI +NGE ALTSLDRKMTS
Sbjct: 962  KEREKQLQICEKIGEQVHLEFLKVKDGEKLDPMTLQLNIEKTISNNGEAALTSLDRKMTS 1021

Query: 1279 QLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKR 1338
            QLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKR
Sbjct: 1022 QLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKR 1081

Query: 1339 VPRMVSGKTLPCFPSWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 1398
            VPRMVSGKTLPCFP WDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS
Sbjct: 1082 VPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 1141

Query: 1399 GYLQRCLIKNMESLKICYDHTVRDADGSIIQFQYGEDGIDVHKTAFITKFEALVANRDML 1458
            GYLQRCLIKN+E+LKICYDHTVRDADGS+IQFQYGEDG+DVHKTAFITKFEAL AN+DML
Sbjct: 1142 GYLQRCLIKNLEALKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDML 1201

Query: 1459 YQKSHHQLGKYNIYINELPSALQEKAEVIYNSFSKDKAPGLVQKDDFFRLLENKYLSSLA 1518
            YQKSHHQLGKYN++INELPSAL+EKAE IYNS SKDK PGLV K+DF RLLENKYLSSLA
Sbjct: 1202 YQKSHHQLGKYNVFINELPSALREKAEFIYNSLSKDKVPGLVVKEDFIRLLENKYLSSLA 1261

Query: 1519 QPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASHDIKTPIMT 1578
            QPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTAS DIKTPIMT
Sbjct: 1262 QPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMT 1321

Query: 1579 CPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPFSVRKREICSIYKLEIKFYPLEN 1638
            CPL++GYSMD AK LANKLKKITVADIIESM VTVVPFS RK EICSIYKL I FYPL+N
Sbjct: 1322 CPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKLEICSIYKLRIDFYPLDN 1381

Query: 1639 NPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRINGIKNFVPDSQSQGSSERDEVS 1698
            N QHGH+S EDLE  LE VF+ ELE  I+ EM+LLS+INGIKNFVPDSQS+ SSE DEVS
Sbjct: 1382 NAQHGHISPEDLENTLEIVFLEELEALIEREMVLLSKINGIKNFVPDSQSKVSSEGDEVS 1441

Query: 1699 SSQHEE-NDDDDNVGNDVDAAEDLGFDMKKQKLRATDEMDYEDDSDEELNAKAPSAGFES 1758
             SQ EE +DDDD++GND+D AEDLG DMKKQKL+ATDEMDYEDDS+++LNAK PS GFES
Sbjct: 1442 GSQQEEKDDDDDDLGNDLDVAEDLGSDMKKQKLQATDEMDYEDDSEDDLNAKEPSTGFES 1501

Query: 1759 EVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLKGKTPKTANKKKKRAKLEFSRK 1818
            EVDQGDE EITN++I +I KDS SEN+ EI D+SKS  K KT +T+ KKKK  K EF+RK
Sbjct: 1502 EVDQGDEAEITNNEI-EIVKDSASENEPEIVDISKSESKEKTTETSEKKKK-VKSEFNRK 1561

Query: 1819 DYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQKVSIQSSGKIIRCQQITCKEGQ 1878
            D DR+IF  AK NHFEVHFKF NEPHILL+Q+AQ+ AQKVSIQ SGKII+CQQITCKEGQ
Sbjct: 1562 DTDRSIFAEAKENHFEVHFKFTNEPHILLSQIAQRAAQKVSIQRSGKIIQCQQITCKEGQ 1621

Query: 1879 VIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQDELDVRYIYSNDIHAMLETYG 1938
            VIYHGNN+KERK +K EEKEKIPA+QT+GVDF+ LWE+QDELDVRYIYSNDIHAML+TYG
Sbjct: 1622 VIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYG 1681

Query: 1939 VEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSGGYRPMSRLGGIAESISPFSRM 1998
            VEAAR T++REIQNIF+SYGISVNIRHL+LVADYMTHSGGYRPMSRLGGI++SISPFSRM
Sbjct: 1682 VEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRM 1741

Query: 1999 TFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTGSFDLMQKIEV 2040
            TFETA KFIVQAA HGE+DNLETPS+RICLGLP KMGTGSFDLMQ+IEV
Sbjct: 1742 TFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQQIEV 1769

BLAST of Moc05g28010 vs. ExPASy TrEMBL
Match: A0A0A0LF53 (DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G811600 PE=3 SV=1)

HSP 1 Score: 2887.8 bits (7485), Expect = 0.0e+00
Identity = 1444/1697 (85.09%), Postives = 1546/1697 (91.10%), Query Frame = 0

Query: 350  TQGASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLC 409
            T+GASESV+ V FSFMT+EEVRK S VKVTAPILLDGMGRPVSGGLYDPAMGSLD+TTLC
Sbjct: 5    TEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLC 64

Query: 410  KSCGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQL 469
            KSCGQRP YCPGHCGHIDLVSPVYNPLLFVILHN L+ TCFSCHHFRAGES VE C + L
Sbjct: 65   KSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLL 124

Query: 470  DLISNGDVVEAKELDSEWL-----SEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFL 529
            +LI +G++ +AKEL+ EW+     ++ SHS Y+  R+N QP  WTSLQFSEAISVV KFL
Sbjct: 125  ELILDGEIAKAKELEEEWMNSKSRTKSSHSMYTYERKNGQPETWTSLQFSEAISVVTKFL 184

Query: 530  KPKQRECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEE 589
            KPKQ  CK CGAK+PKI++PTFGW +M GL G  KRANAIR  KPVSV SGAEG+SSLEE
Sbjct: 185  KPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSGAEGVSSLEE 244

Query: 590  ETTFSHTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQL 649
            ETT                   T+A  ED E+V PEVFMQKNFSSGHL+PSEVK I+++L
Sbjct: 245  ETT-------------------TEATVEDFEDVSPEVFMQKNFSSGHLLPSEVKDILKRL 304

Query: 650  WKNEATLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVMEHPQTVLLN 709
            WKNEA LCSFISDI  QGHG KAGHSMFFLE+VL+PPIKFRPPAKGGDSVMEHPQTVLLN
Sbjct: 305  WKNEALLCSFISDISQQGHGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLN 364

Query: 710  KVLQSNISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISVGICQLLEK 769
            KVLQSNISLGN HANKSEHSKIVRLWMDLQQS+N+LFDSK+AA  G+ D S+GICQLLEK
Sbjct: 365  KVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASLGICQLLEK 424

Query: 770  KEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNA 829
            KEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL+YPERVTAWNVQKLRNA
Sbjct: 425  KEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNA 484

Query: 830  IINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFEGKI 889
            IINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQG  DYEFEGKI
Sbjct: 485  IINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGCDDYEFEGKI 544

Query: 890  VNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVH 949
            VNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVH
Sbjct: 545  VNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVH 604

Query: 950  FPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLL 1009
            FPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLL
Sbjct: 605  FPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLL 664

Query: 1010 YSSGISTSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRG 1069
            YSSGISTS+ CASSEKPGQK+FTLDF+AEMLPVLPA+WKPEPLWTGKQVVTALL+HIT+G
Sbjct: 665  YSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQG 724

Query: 1070 SPPFCVEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSK 1129
            SPPF VEKDVKIPRGFFKCR  GNNSSKVK+VDGDKSKRKRT NEN+L K EV DEGNSK
Sbjct: 725  SPPFFVEKDVKIPRGFFKCRDMGNNSSKVKMVDGDKSKRKRTMNENKLEKGEVLDEGNSK 784

Query: 1130 KKEYSKLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYGSNTAGLLLS 1189
            KKE++K+DKLKA  LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTV ELYGSNTAGLLLS
Sbjct: 785  KKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLS 844

Query: 1190 VMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKDGEKLD 1249
            VMSRLFTVFLQ HGFTCGVDDLLL+ECMDKERE+QLQICEKIGEQVHLGFLKVKDGEKLD
Sbjct: 845  VMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLD 904

Query: 1250 PMTLQLNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISL 1309
            PMTLQLNIEKTI  NGE ALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISL
Sbjct: 905  PMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISL 964

Query: 1310 MTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFIVDRFL 1369
            MTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP WDWASRAGGFIVDRFL
Sbjct: 965  MTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFL 1024

Query: 1370 TGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDADGSIIQ 1429
            TGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN+ESLKICYDHTVRDADGS+IQ
Sbjct: 1025 TGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQ 1084

Query: 1430 FQYGEDGIDVHKTAFITKFEALVANRDMLYQKSHHQLGKYNIYINELPSALQEKAEVIYN 1489
            FQYGEDG+DVHKTAFITKFEAL AN+DMLY+ SHHQLGKYN++INELPSAL+EK E IYN
Sbjct: 1085 FQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSALREKGEFIYN 1144

Query: 1490 SFSKDKAPGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGR 1549
            S SKDK PGLV K+DF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGR
Sbjct: 1145 SLSKDKVPGLVLKEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGR 1204

Query: 1550 GEMNVTLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESM 1609
            GEMNVTLGIPRLQEILMTAS DIKTPIMTCPL++GYSMD AK LANKLKKITVADIIESM
Sbjct: 1205 GEMNVTLGIPRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESM 1264

Query: 1610 EVTVVPFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNE 1669
             VTVVPFS RKREICSIYKL I FYPLENN QHGH+S EDLE  LE VF+ ELE  I+ E
Sbjct: 1265 NVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIERE 1324

Query: 1670 MILLSRINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQK 1729
            M+LLS+INGIKNFVPDSQS+GSSE DEVSSS+ EENDDDD+ GND+D AEDLG DMKKQK
Sbjct: 1325 MVLLSKINGIKNFVPDSQSKGSSEGDEVSSSRQEENDDDDDEGNDLDVAEDLGSDMKKQK 1384

Query: 1730 LRATDEMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITD 1789
            L+A DEMDYEDDS+++LNAK  S GFESEVDQGDE EITN+D+++I KDS SENQ EI D
Sbjct: 1385 LQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVD 1444

Query: 1790 VSKSNLKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQV 1849
            VSKS  K KT +T +K+KK+ K E  RK+ DR+IFV AK NHFEVHFKF NEPH LL+Q+
Sbjct: 1445 VSKSMSKEKTTET-SKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQI 1504

Query: 1850 AQKTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDF 1909
             Q+ AQKVSIQ SGKII+CQQITCKEGQVIYHGNN+KERK +K EEKEKIPA+QT+GVDF
Sbjct: 1505 VQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDF 1564

Query: 1910 RMLWELQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVA 1969
            + LWE+QDELDVRYIYSNDIHAML+TYGVEAAR T++REIQNIF+SYGISVNIRHL+LVA
Sbjct: 1565 KTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVA 1624

Query: 1970 DYMTHSGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGL 2029
            DYMTHSGGYRPMSRLGGI++SISPFSRMTFETA KFIVQAA HGE+DNLETPS+RICLGL
Sbjct: 1625 DYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGL 1681

Query: 2030 PAKMGTGSFDLMQKIEV 2040
            P KMGTGSFDLMQKIEV
Sbjct: 1685 PVKMGTGSFDLMQKIEV 1681

BLAST of Moc05g28010 vs. TAIR 10
Match: AT3G57660.1 (nuclear RNA polymerase A1 )

HSP 1 Score: 1863.6 bits (4826), Expect = 0.0e+00
Identity = 990/1711 (57.86%), Postives = 1241/1711 (72.53%), Query Frame = 0

Query: 352  GASESVEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKS 411
            GAS+ VE+V FSFMT+++VRKHS +KVT+PIL D +G P  GGLYD  +G  DD   C S
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILHDNVGNPFPGGLYDLKLGPKDDKQACNS 81

Query: 412  CGQRPLYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQLDL 471
            CGQ  L CPGHCGHI+LV P+Y+PLLF +L N LQR CF CHHF A    VE+ VSQL L
Sbjct: 82   CGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACFFCHHFMAKPEDVERAVSQLKL 141

Query: 472  ISNGDVVEAKELDSEWLSEPSHSKYSNGR---------------QNMQPGKWTSLQFSEA 531
            I  GD+V AK+L+S   + P+ SK S+                  +++  +WTSLQF+E 
Sbjct: 142  IIKGDIVSAKQLES---NTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQFAEV 201

Query: 532  ISVVNKFLKPKQRECKNCGAKNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGA 591
             +V+  F++   + C  C   NPK+ +P FGW+ M  +  +   AN IRG K        
Sbjct: 202  TAVLKNFMRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIRGLKL------K 261

Query: 592  EGISSLEEETTFSHTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSE 651
            +  SS+E    F  + +   SE +  D    K   E S EV  E   +++ S   L+PSE
Sbjct: 262  KSTSSVENPDGFDDSGIDALSEVEDGD----KETREKSTEVAAE--FEEHNSKRDLLPSE 321

Query: 652  VKVIMRQLWKNEATLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAKGGDSVME 711
            V+ I++ LW+NE   CSFI D+   G  +K  +SMFFLE+VL+PP KFRPP  GGDSVME
Sbjct: 322  VRNILKHLWQNEHEFCSFIGDLWQSG-SEKIDYSMFFLESVLVPPTKFRPPTTGGDSVME 381

Query: 712  HPQTVLLNKVLQSNISLGNAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAA--GQKDISV 771
            HPQTV LNKV++SN  LGNA  NK + SK++  W +LQ+SVNVLFDSKTA    Q+D S 
Sbjct: 382  HPQTVGLNKVIESNNILGNACTNKLDQSKVIFRWRNLQESVNVLFDSKTATVQSQRD-SS 441

Query: 772  GICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAW 831
            GICQLLEKKEG+FRQKMMGKRVN ACRSVISPDPY+AVN+IGIPP FAL+L+YPERVT W
Sbjct: 442  GICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVTPW 501

Query: 832  NVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQG-S 891
            NV+KLR AIINGP+ HPGATHY DK +T+K  L  + K+R +I+RKL SSRG   + G +
Sbjct: 502  NVEKLREAIINGPDIHPGATHYSDKSSTMK--LPSTEKARRAIARKLLSSRGATTELGKT 561

Query: 892  GDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNAD 951
             D  FEGK V+RH++DGDIVLVNRQPTLHKPS+MAH VRVLKGEKT+R+HYANCSTYNAD
Sbjct: 562  CDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYNAD 621

Query: 952  FDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFL 1011
            FDGDEMNVHFPQDEISRAEAYNIVNANNQY +P++GEP+RALIQDHI+S+VLLTK+DTFL
Sbjct: 622  FDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDTFL 681

Query: 1012 NFDEFSQLLYSSGISTSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVT 1071
            + D F+QLL+SSG++       S + G+KV     +AE+L V PAI KP PLWTGKQV+T
Sbjct: 682  DKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVIT 741

Query: 1072 ALLEHITRGSPPFCVEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKS 1131
            A+L  IT+G PPF VEK  K+P  FFKCR     S +VK   GD +K+K           
Sbjct: 742  AVLNQITKGHPPFTVEKATKLPVDFFKCR-----SREVKPNSGDLTKKK----------- 801

Query: 1132 EVPDEGNSKKKEYSKLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVHELYG 1191
                          ++D+   ++L++D L I KNE V GVIDKAQF DYGLVHTVHELYG
Sbjct: 802  --------------EIDESWKQNLNEDKLHIRKNEFVCGVIDKAQFADYGLVHTVHELYG 861

Query: 1192 SNTAGLLLSVMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFL 1251
            SN AG LLSV SRLFTVFLQ HGFTCGVDDL++L+ MD+ER +QLQ CE +GE+V     
Sbjct: 862  SNAAGNLLSVFSRLFTVFLQTHGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTF 921

Query: 1252 KVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLK 1311
             +    ++DP  ++  IE+ + ++GE AL SLDR + + LN+   +  V+ DLLS+GLLK
Sbjct: 922  GIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQ-CSSKGVMNDLLSDGLLK 981

Query: 1312 PSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRA 1371
               +NCISLMT SGAKG   NFQQISSHLGQQ LEGKRVPRMVSGKTLPCF  WDW+ RA
Sbjct: 982  TPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRA 1041

Query: 1372 GGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTV 1431
            GGFI DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KN+ESLK+ YD TV
Sbjct: 1042 GGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTV 1101

Query: 1432 RDADGSIIQFQYGEDGIDVHKTAFITKFEALVANRDMLYQK-SHHQLGKYNIYINELPSA 1491
            RDADGSIIQFQYGEDG+DVH+++FI KF+ L  N+DM+ QK S   L   + YI++LP +
Sbjct: 1102 RDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCSEDMLSGASSYISDLPIS 1161

Query: 1492 LQEKAEVIYNSFSKDK--APGLVQKDDFFRLLENKYLSSLAQPGEPVGVLAAQSIGEPST 1551
            L++ AE    +   ++  A   V++++  +L+++K+ +SLAQPGEPVGVLAAQS+GEPST
Sbjct: 1162 LKKGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPST 1221

Query: 1552 QMTLNTFHHAGRGEMNVTLGIPRLQEILMTASHDIKTPIMTCPLRDGYSMDYAKCLANKL 1611
            QMTLNTFH AGRGEMNVTLGIPRLQEILMTA+ +IKTPIMTCPL  G + + A  + ++L
Sbjct: 1222 QMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTKEDANDITDRL 1281

Query: 1612 KKITVADIIESMEVTVVPFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFV 1671
            +KITVADII+SME++VVP++V + E+CSI+KL+I  Y  E+ P+H  ++ ED EE +  V
Sbjct: 1282 RKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMRAV 1341

Query: 1672 FVRELEDSIQNEMILLSRINGIKNFVPDSQSQGSSERDE-VSSSQHEENDDDDNVGNDVD 1731
            F+R+LED+I+  M +L RI GI N V    +   ++ D+ VS  Q+E++ DDD  G +VD
Sbjct: 1342 FLRKLEDAIETHMKMLHRIRGIHNDVTGPIAGNETDNDDSVSGKQNEDDGDDDGEGTEVD 1401

Query: 1732 AAEDLGFDMKKQKLRATDEMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIA 1791
               DLG D +KQK + TDEMDYE++S++E N  +  +G E       E++  N+D  +++
Sbjct: 1402 ---DLGSDAQKQKKQETDEMDYEENSEDETNEPSSISGVED-----PEMDSENED-TEVS 1461

Query: 1792 KDSTSENQTEITDVSKSNLKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHF 1851
            K+ T E Q E  +  K     K  K  +KKK+R   +F R   DR IFV  +G  FEVHF
Sbjct: 1462 KEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRR---KFVRAKSDRHIFVKGEGEKFEVHF 1521

Query: 1852 KFA-NEPHILLTQVAQKTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEE 1911
            KFA ++PHILL Q+AQ+TAQKV IQ+SGKI RC    C + QVIYHG+N KER+++  +E
Sbjct: 1522 KFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCGDPQVIYHGDNPKERREISNDE 1581

Query: 1912 KEKIPAVQTTGVDFRMLWELQDELDVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSS 1971
            K+  PA+  +GVDF  LWE QD+LDVRY+YSN IH ML  +GVEAARET++REI ++F S
Sbjct: 1582 KKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFKS 1641

Query: 1972 YGISVNIRHLTLVADYMTHSGGYRPMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEI 2031
            YGISV+IRHL L+ADYMT SGGYRPMSR+GGIAES SPF RMTFETA+KFIVQAA +GE 
Sbjct: 1642 YGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEK 1670

Query: 2032 DNLETPSARICLGLPAKMGTGSFDLMQKIEV 2040
            D LETPSARICLGLPA  GTG FDLMQ++E+
Sbjct: 1702 DTLETPSARICLGLPALSGTGCFDLMQRVEL 1670

BLAST of Moc05g28010 vs. TAIR 10
Match: AT5G60040.1 (nuclear RNA polymerase C1 )

HSP 1 Score: 469.5 bits (1207), Expect = 1.3e-131
Identity = 458/1733 (26.43%), Postives = 730/1733 (42.12%), Query Frame = 0

Query: 357  VEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKSCGQRP 416
            ++++ FS ++D EV K + V+V    L D   +P   GL DP MG  +  ++C +C    
Sbjct: 23   IKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRMGPPNKKSICTTCEGNF 82

Query: 417  LYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQLDLISNGD 476
              CPGH G++ L  PVYN   F  + +IL+  C  C +                      
Sbjct: 83   QNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNM--------------------- 142

Query: 477  VVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQRECKNCGA 536
                  L  E L E    K  N R  M+P K T L     +   +     +   CK CG 
Sbjct: 143  ------LLDEKLYEDHLRKMRNPR--MEPLKKTELA-KAVVKKCSTMASQRIITCKKCGY 202

Query: 537  KNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEE-ETTFSHTTVIN 596
             N  + +    +    G+  +H R          S I G E    ++E ++  SHT    
Sbjct: 203  LNGMVKKIAAQF----GIGISHDR----------SKIHGGE----IDECKSAISHT---- 262

Query: 597  TSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEATLCSFI 656
                            + +  + P  ++        L P+ V  + +++   +  L    
Sbjct: 263  ---------------KQSTAAINPLTYV--------LDPNLVLGLFKRMSDKDCELLYIA 322

Query: 657  SDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAK-GGDSVMEHPQTVLLNKVLQSNISLG 716
               ++             +  +L+PP+  RP    GG    E+  T  L +++  N SL 
Sbjct: 323  YRPEN-----------LIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLH 382

Query: 717  NAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDIS----VGICQLLEKKEGMFRQK 776
               +  +   K +++W  +Q  V    +S+    Q         GI Q L+ K G FR  
Sbjct: 383  KILSQPTSSPKNMQVWDTVQIEVARYINSEVRGCQNQPEEHPLSGILQRLKGKGGRFRAN 442

Query: 777  MMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPETH 836
            + GKRV F  R+VISPDP L + E+GIP   A  L++PE V+  N++KLR  + NGP  +
Sbjct: 443  LSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKY 502

Query: 837  PGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVD--QGSGDYEFEGKIVNRHLQ 896
            PGA                      ++     SSR +V D  +   D    G IV+RHLQ
Sbjct: 503  PGAR---------------------NVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQ 562

Query: 897  DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEI 956
            +GD+VL NRQP+LH+ SIM H  R++   +T+R + + C+ YNADFDGDEMN+H PQ E 
Sbjct: 563  EGDVVLFNRQPSLHRMSIMCHRARIMPW-RTLRFNESVCNPYNADFDGDEMNMHVPQTEE 622

Query: 957  SRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIS 1016
            +R EA  ++   N    P +GE + A  QD + S+ L+T+KDTF +   FS +       
Sbjct: 623  ARTEAITLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLI------- 682

Query: 1017 TSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCV 1076
                C+     G  + ++D     LP  P I KP  LWTGKQ+ + LL            
Sbjct: 683  ----CSYM---GDGMDSID-----LPT-PTILKPIELWTGKQIFSVLLR----------- 742

Query: 1077 EKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSK 1136
                             N S +V V    K K                   N KK E+  
Sbjct: 743  ----------------PNASIRVYVTLNVKEK-------------------NFKKGEHGF 802

Query: 1137 LDKLKAEHLDDDSLLIFKN-ELVRGVIDKAQFGD---YGLVHTVHELYGSNTAGLLLSVM 1196
             + +      +D  + F+N EL+ G + KA  G+    GL   +   Y S+ A + ++ +
Sbjct: 803  DETM----CINDGWVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNSHAAAVCMNRL 862

Query: 1197 SRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQI----CEKIGEQVHLGFLKVKDGEK 1256
            ++L   ++ +HGF+ G+DD+   E + KER++ +Q     C +  E+ + G L++K G  
Sbjct: 863  AKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAG-- 922

Query: 1257 LDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLN---ERTGNSKVLKDLLSEGLLKPSVK 1316
            LD                     SL+ ++T  LN   E TG +         GL     +
Sbjct: 923  LD------------------GAKSLEAEITGILNTIREATGKA------CMSGL---HWR 982

Query: 1317 NCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGGFI 1376
            N   +M+  G+KG   N  Q+ + +GQQ + G R P     ++LP FP    +  A GF+
Sbjct: 983  NSPLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFV 1042

Query: 1377 VDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRDAD 1436
             + F +GL   E++FH M GREGLVDTAVKT+ +GY+ R L+K +E L + YD+TVR+A 
Sbjct: 1043 ANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNAS 1102

Query: 1437 GSIIQFQYGEDGIDVHKTAFITKFEALVANRDMLYQK--------SHHQLGKYNIYINEL 1496
            G I+QF YG+DG+D    A +   +    N + L+ K        SHH          + 
Sbjct: 1103 GCILQFTYGDDGMD---PALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKF 1162

Query: 1497 PSAL--QEKAEVIYNSFSKD--------------------KAPGLVQK--DDFFRLLENK 1556
               L   +K+ V  ++F K                     KA G+  K  + F ++   +
Sbjct: 1163 EEELVRHDKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVFR 1222

Query: 1557 YLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASHDI 1616
            Y     + G  +G + AQSIGEP TQMTL TFH AG   MN+T G+PR+ EI+  AS +I
Sbjct: 1223 YREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEII-NASKNI 1282

Query: 1617 KTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPFSVRKREICSIYKLEIK 1676
             TP+++  L +   +  A+ +  +++K T+  + ES+EV +   S   R I         
Sbjct: 1283 STPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRII--------- 1342

Query: 1677 FYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRINGIKNFVPDSQSQGSS 1736
               L+N             +I+E   +     S++N ++   RI                
Sbjct: 1343 ---LDN-------------KIIEEACLSITPWSVKNSILKTPRI---------------- 1362

Query: 1737 ERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEMDYEDDSDEELNAKAPS 1796
                      + ND+D  V        D G D+                           
Sbjct: 1403 ----------KLNDNDIRV-------LDTGLDI--------------------------- 1362

Query: 1797 AGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLKGKTPKTANKKKKRAKL 1856
                                            T + D S++                   
Sbjct: 1463 --------------------------------TPVVDKSRA------------------- 1362

Query: 1857 EFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQKVSIQSSGKIIRCQQIT 1916
                              HF +H      P+I++  +  KT ++V +     + + +QI 
Sbjct: 1523 ------------------HFNLHNLKNVLPNIIVNGI--KTVERVVVAED--MDKSKQI- 1362

Query: 1917 CKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQDELDVRYIYSNDIHAM 1976
                       + K + K+ +E    +  + T G++ R               SN++  +
Sbjct: 1583 -----------DGKTKWKLFVEGTNLLAVMGTPGINGRT------------TTSNNVVEV 1362

Query: 1977 LETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSGGYRPMSRLGGIAESIS 2036
             +T G+EAAR T++ EI  +  ++G+S++IRH+ L+AD MT+ G    + R G      S
Sbjct: 1643 SKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKS 1362

Query: 2037 PFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTGSFDLMQKIE 2039
               + +FE     +  AA  G++DN+E  +  + +G+P K+GTG   ++Q+ +
Sbjct: 1703 VLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQRTD 1362

BLAST of Moc05g28010 vs. TAIR 10
Match: AT5G60040.2 (nuclear RNA polymerase C1 )

HSP 1 Score: 461.5 bits (1186), Expect = 3.6e-129
Identity = 456/1746 (26.12%), Postives = 728/1746 (41.70%), Query Frame = 0

Query: 357  VEAVAFSFMTDEEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLDDTTLCKSCGQRP 416
            ++++ FS ++D EV K + V+V    L D   +P   GL DP MG  +  ++C +C    
Sbjct: 23   IKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRMGPPNKKSICTTCEGNF 82

Query: 417  LYCPGHCGHIDLVSPVYNPLLFVILHNILQRTCFSCHHFRAGESQVEKCVSQLDLISNGD 476
              CPGH G++ L  PVYN   F  + +IL+  C           +V +    + L  +  
Sbjct: 83   QNCPGHYGYLKLDLPVYNVGYFNFILDILKCIC-----------KVTELADYVSLRCSNM 142

Query: 477  VVEAKELDSEWLSEPSHSKYSNGRQNMQPGKWTSLQFSEAISVVNKFLKPKQRECKNCGA 536
            +++ K      L E    K  N R  M+P K T L     +   +     +   CK CG 
Sbjct: 143  LLDEK------LYEDHLRKMRNPR--MEPLKKTELA-KAVVKKCSTMASQRIITCKKCGY 202

Query: 537  KNPKISRPTFGWLNMSGLPGAHKRANAIRGCKPVSVISGAEGISSLEE-ETTFSHTTVIN 596
             N  + +    +    G+  +H R          S I G E    ++E ++  SHT    
Sbjct: 203  LNGMVKKIAAQF----GIGISHDR----------SKIHGGE----IDECKSAISHT---- 262

Query: 597  TSEGDAFDDTATKAPTEDSEEVPPEVFMQKNFSSGHLMPSEVKVIMRQLWKNEATLCSFI 656
                            + +  + P  ++        L P+ V  + +++   +  L    
Sbjct: 263  ---------------KQSTAAINPLTYV--------LDPNLVLGLFKRMSDKDCELLYIA 322

Query: 657  SDIQHQGHGKKAGHSMFFLENVLIPPIKFRPPAK-GGDSVMEHPQTVLLNKVLQSNISLG 716
               ++             +  +L+PP+  RP    GG    E+  T  L +++  N SL 
Sbjct: 323  YRPEN-----------LIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLH 382

Query: 717  NAHANKSEHSKIVRLWMDLQQSVNVLFDSKTAAGQKDIS----VGICQLLEKKEGMFRQK 776
               +  +   K +++W  +Q  V    +S+    Q         GI Q L+ K G FR  
Sbjct: 383  KILSQPTSSPKNMQVWDTVQIEVARYINSEVRGCQNQPEEHPLSGILQRLKGKGGRFRAN 442

Query: 777  MMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPETH 836
            + GKRV F  R+VISPDP L + E+GIP   A  L++PE V+  N++KLR  + NGP  +
Sbjct: 443  LSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKY 502

Query: 837  PGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVD--QGSGDYEFEGKIVNRHLQ 896
            PGA                      ++     SSR +V D  +   D    G IV+RHLQ
Sbjct: 503  PGAR---------------------NVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQ 562

Query: 897  DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEI 956
            +GD+VL NRQP+LH+ SIM H  R++   +T+R + + C+ YNADFDGDEMN+H PQ E 
Sbjct: 563  EGDVVLFNRQPSLHRMSIMCHRARIMPW-RTLRFNESVCNPYNADFDGDEMNMHVPQTEE 622

Query: 957  SRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGIS 1016
            +R EA  ++   N    P +GE + A  QD + S+ L+T+KDTF +   FS +       
Sbjct: 623  ARTEAITLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLI------- 682

Query: 1017 TSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGSPPFCV 1076
                C+     G  + ++D     LP  P I KP  LWTGKQ+ + LL            
Sbjct: 683  ----CSYM---GDGMDSID-----LPT-PTILKPIELWTGKQIFSVLLR----------- 742

Query: 1077 EKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKKKEYSK 1136
                             N S +V V    K K                   N KK E+  
Sbjct: 743  ----------------PNASIRVYVTLNVKEK-------------------NFKKGEHGF 802

Query: 1137 LDKLKAEHLDDDSLLIFKN-ELVRGVIDKAQF----------GDYGLVHTVHELYGSNTA 1196
             + +      +D  + F+N EL+ G + KA               GL   +   Y S+ A
Sbjct: 803  DETM----CINDGWVYFRNSELISGQLGKATLALDIFPLGNGNKDGLYSILLRDYNSHAA 862

Query: 1197 GLLLSVMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQI----CEKIGEQVHLGFL 1256
             + ++ +++L   ++ +HGF+ G+DD+   E + KER++ +Q     C +  E+ + G L
Sbjct: 863  AVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNL 922

Query: 1257 KVKDGEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLN---ERTGNSKVLKDLLSEG 1316
            ++K G  LD                     SL+ ++T  LN   E TG +         G
Sbjct: 923  QLKAG--LD------------------GAKSLEAEITGILNTIREATGKA------CMSG 982

Query: 1317 LLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWA 1376
            L     +N   +M+  G+KG   N  Q+ + +GQQ + G R P     ++LP FP    +
Sbjct: 983  L---HWRNSPLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKS 1042

Query: 1377 SRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYD 1436
              A GF+ + F +GL   E++FH M GREGLVDTAVKT+ +GY+ R L+K +E L + YD
Sbjct: 1043 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYD 1102

Query: 1437 HTVRDADGSIIQFQYGEDGIDVHKTAFITKFEALVANRDMLYQK--------SHHQLGKY 1496
            +TVR+A G I+QF YG+DG+D    A +   +    N + L+ K        SHH     
Sbjct: 1103 NTVRNASGCILQFTYGDDGMD---PALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSS 1162

Query: 1497 NIYINELPSAL--QEKAEVIYNSFSKD--------------------KAPGLVQK--DDF 1556
                 +    L   +K+ V  ++F K                     KA G+  K  + F
Sbjct: 1163 EELSQKFEEELVRHDKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVF 1222

Query: 1557 FRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEIL 1616
             ++   +Y     + G  +G + AQSIGEP TQMTL TFH AG   MN+T G+PR+ EI+
Sbjct: 1223 VKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEII 1282

Query: 1617 MTASHDIKTPIMTCPLRDGYSMDYAKCLANKLKKITVADIIESMEVTVVPFSVRKREICS 1676
              AS +I TP+++  L +   +  A+ +  +++K T+  + ES+EV +   S   R I  
Sbjct: 1283 -NASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRII-- 1342

Query: 1677 IYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMILLSRINGIKNFVPD 1736
                      L+N             +I+E   +     S++N ++   RI         
Sbjct: 1343 ----------LDN-------------KIIEEACLSITPWSVKNSILKTPRI--------- 1377

Query: 1737 SQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRATDEMDYEDDSDEE 1796
                             + ND+D  V        D G D+                    
Sbjct: 1403 -----------------KLNDNDIRV-------LDTGLDI-------------------- 1377

Query: 1797 LNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSKSNLKGKTPKTANK 1856
                                                   T + D S++            
Sbjct: 1463 ---------------------------------------TPVVDKSRA------------ 1377

Query: 1857 KKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQKTAQKVSIQS---- 1916
                                     HF +H      P+I++  +  KT ++V +      
Sbjct: 1523 -------------------------HFNLHNLKNVLPNIIVNGI--KTVERVVVAEDMDK 1377

Query: 1917 --SGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRMLWELQDEL 1976
              +  II C +  C                         +  + T G++ R         
Sbjct: 1583 MLAKLIIPCPRWAC----------------------TNLLAVMGTPGINGRT-------- 1377

Query: 1977 DVRYIYSNDIHAMLETYGVEAARETVMREIQNIFSSYGISVNIRHLTLVADYMTHSGGYR 2036
                  SN++  + +T G+EAAR T++ EI  +  ++G+S++IRH+ L+AD MT+ G   
Sbjct: 1643 ----TTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVL 1377

Query: 2037 PMSRLGGIAESISPFSRMTFETASKFIVQAAFHGEIDNLETPSARICLGLPAKMGTGSFD 2039
             + R G      S   + +FE     +  AA  G++DN+E  +  + +G+P K+GTG   
Sbjct: 1703 GIQRTGIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILK 1377

BLAST of Moc05g28010 vs. TAIR 10
Match: AT4G35800.1 (RNA polymerase II large subunit )

HSP 1 Score: 394.4 bits (1012), Expect = 5.4e-109
Identity = 399/1508 (26.46%), Postives = 603/1508 (39.99%), Query Frame = 0

Query: 656  SDIQHQGHGKK-AGHSMFFLENVLIPPIKFRPPA-KGGDSVMEHPQTVLLNKVLQSNISL 715
            +D Q  G   K A      LE + IPP   RP       S  E   T  L  +++ N +L
Sbjct: 228  ADCQLLGFNPKFARPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENL 287

Query: 716  GNAHANKSEHSKIVRLWMDLQQSVNVLFDSK-------TAAGQKDISVGICQLLEKKEGM 775
                 N +    I      LQ  +   FD++       T    + I   IC  L+ KEG 
Sbjct: 288  KRQEKNGAPAHIISEFTQLLQFHIATYFDNELPGQPRATQKSGRPIK-SICSRLKAKEGR 347

Query: 776  FRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTAWNVQKLRNAIING 835
             R  +MGKRV+F+ R+VI+PDP + ++E+G+P   AL L+YPE VT +N+++L+  +  G
Sbjct: 348  IRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYG 407

Query: 836  PETHPGAT--HYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSGDYEFE-GKIV 895
            P   PG T   YI +    +L+L+  +K                    S D   E G  V
Sbjct: 408  PHPPPGKTGAKYIIRDDGQRLDLRYLKK--------------------SSDQHLELGYKV 467

Query: 896  NRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHF 955
             RHLQDGD VL NRQP+LHK SIM H +R++    T R++ +  S YNADFDGDEMN+H 
Sbjct: 468  ERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMP-YSTFRLNLSVTSPYNADFDGDEMNMHV 527

Query: 956  PQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLY 1015
            PQ   +RAE   ++      V P +  P+  ++QD ++    +TK+DTF+  D F   L 
Sbjct: 528  PQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTL- 587

Query: 1016 SSGISTSRPCASSEKPGQKVFTLDFEAEMLPVLPAIWKPEPLWTGKQVVTALLEHITRGS 1075
                               ++  DF+ ++    PAI KP PLWTGKQV   +        
Sbjct: 588  -------------------MWWEDFDGKV--PAPAILKPRPLWTGKQVFNLI-------- 647

Query: 1076 PPFCVEKDVKIPRGFFKCRHTGNNSSKVKVVDGDKSKRKRTWNENRLGKSEVPDEGNSKK 1135
                + K + + R  +   H    +    +  GD   R                      
Sbjct: 648  ----IPKQINLLR--YSAWHADTETG--FITPGDTQVR---------------------- 707

Query: 1136 KEYSKLDKLKAEHLDDDSLLIFKNELVRGVIDKAQFG--DYGLVHTVHELYGSNTAGLLL 1195
                                I + EL+ G + K   G  +  LVH + E  G + A   L
Sbjct: 708  --------------------IERGELLAGTLCKKTLGTSNGSLVHVIWEEVGPDAARKFL 767

Query: 1196 SVMSRLFTVFLQMHGFTCGVDDLLLLECMDKEREEQLQICEKIGEQVHLGFLKVKD---- 1255
                 L   +L  +GFT G+ D +                EKI E +      VKD    
Sbjct: 768  GHTQWLVNYWLLQNGFTIGIGDTI----------ADSSTMEKINETISNAKTAVKDLIRQ 827

Query: 1256 --GEKLDPMTLQLNIEKTICDNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPS 1315
              G++LDP            + G     + + ++   LN      K   D  S      +
Sbjct: 828  FQGKELDP------------EPGRTMRDTFENRVNQVLN------KARDDAGSSAQKSLA 887

Query: 1316 VKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPSWDWASRAGG 1375
              N +  M T+G+KG   N  Q+++ +GQQ +EGKR+P    G+TLP F   D+   + G
Sbjct: 888  ETNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRG 947

Query: 1376 FIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNMESLKICYDHTVRD 1435
            F+ + +L GL PQE++FH M GREGL+DTAVKTS +GY+QR L+K ME + + YD TVR+
Sbjct: 948  FVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRN 1007

Query: 1436 ADGSIIQFQYGEDGID-------------VHKTAF--ITKFEALVANRDMLYQKSHH--- 1495
            + G +IQF YGEDG+D             + K+ F    K+E    N +  Y    H   
Sbjct: 1008 SLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLED 1067

Query: 1496 -----------------------QLG---------------------------------- 1555
                                   QLG                                  
Sbjct: 1068 LKGIRELRDVFDAEYSKLETDRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRK 1127

Query: 1556 ---KYNIYINELPSALQEKAEVIYNSFSKDKAPGLVQKDD--FFRLL------------- 1615
                + + I +    LQE+  V+      D      QK+   FF +L             
Sbjct: 1128 ISDMHPVEIVDAVDKLQERLLVVPGD---DALSVEAQKNATLFFNILLRSTLASKRVLEE 1187

Query: 1616 ---------------ENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNV 1675
                           E+++L SL  PGE +G +AAQSIGEP+TQMTLNTFH+AG    NV
Sbjct: 1188 YKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNV 1247

Query: 1676 TLGIPRLQEILMTASHDIKTPIMTCPL--RDGYSMDYAKCLANKLKKITVADIIESMEVT 1735
            TLG+PRL+EI+  A   IKTP ++  L      S + AK +   L+  T+  + ++ EV 
Sbjct: 1248 TLGVPRLREIINVAKR-IKTPSLSVYLTPEASKSKEGAKTVQCALEYTTLRSVTQATEVW 1307

Query: 1736 VVPFSVRKREICSIYKLEIKFYPLENNPQHGHVSSEDLEEILEFVFVRELEDSIQNEMIL 1795
              P                       +P    +  ED E +  +  + + + S       
Sbjct: 1308 YDP-----------------------DPM-STIIEEDFEFVRSYYEMPDEDVSPDKISPW 1367

Query: 1796 LSRINGIKNFVPDSQSQGSSERDEVSSSQHEENDDDDNVGNDVDAAEDLGFDMKKQKLRA 1855
            L RI   +  + D +    S  D       E +DD   + ND D A+ L   ++      
Sbjct: 1368 LLRIELNREMMVDKK---LSMADIAEKINLEFDDDLTCIFND-DNAQKLILRIRIMN--- 1427

Query: 1856 TDEMDYEDDSDEELNAKAPSAGFESEVDQGDEVEITNDDIMDIAKDSTSENQTEITDVSK 1915
                                       D+G + E+ ++     A+D     + E   +++
Sbjct: 1428 ---------------------------DEGPKGELQDES----AEDDVFLKKIESNMLTE 1464

Query: 1916 SNLKGKTPKTANKKKKRAKLEFSRKDYDRAIFVAAKGNHFEVHFKFANEPHILLTQVAQK 1975
              L+G                    D ++      + + F+    F             K
Sbjct: 1488 MALRG------------------IPDINKVFIKQVRKSRFDEEGGF-------------K 1464

Query: 1976 TAQKVSIQSSGKIIRCQQITCKEGQVIYHGNNVKERKKMKLEEKEKIPAVQTTGVDFRML 2034
            T+++  + + G  +    + C E                                     
Sbjct: 1548 TSEEWMLDTEG--VNLLAVMCHE------------------------------------- 1464

BLAST of Moc05g28010 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 135/537 (25.14%), Postives = 229/537 (42.64%), Query Frame = 0

Query: 530  ECKNCGAKNPKISRPTFGWLNMSGLPGAH-KRANAIRG-----CKPVSVISGAEGISS-- 589
            +C++CGA  P      FG++ +  +P  H    N ++      C     I  A+G S   
Sbjct: 56   KCESCGATEPDKCEGHFGYIQLP-VPIYHPAHVNELKQMLSLLCLKCLKIKKAKGTSGGL 115

Query: 590  --------LEEETTFSHTTVINTSEGDAFDDTATKAPTEDSEEVPPEVFMQK---NFSSG 649
                     EE +  S    I     D       K P+    +     F+++    + S 
Sbjct: 116  ADRLLGVCCEEASQIS----IKDRASDGASYLELKLPSRSRLQPGCWNFLERYGYRYGSD 175

Query: 650  H---LMPSEVKVIMRQLWKNEATLCSFISDIQHQGHGKKAGHSMFFLENVLIPPIKFR-P 709
            +   L+  EVK I+R++ +           +  +GH  + G   + LE + +PP     P
Sbjct: 176  YTRPLLAREVKEILRRIPEESR------KKLTAKGHIPQEG---YILEYLPVPPNCLSVP 235

Query: 710  PAKGGDSVME-HPQTVLLNKVLQSNISL-------GNAHANKSEHSKIVRLWMDLQQSVN 769
             A  G S M   P  + L  VL+  I++        N  ++K+E S++ R+ +D    V 
Sbjct: 236  EASDGFSTMSVDPSRIELKDVLKKVIAIKSSRSGETNFESHKAEASEMFRV-VDTYLQVR 295

Query: 770  VLFDSKTAAGQKDISVGICQLLEKKEG-----MFRQKMMGKRVNFACRSVISPDPYLAVN 829
                +  AA   D+  G+ ++ +           R   + K   F+ RSVI+ D Y  VN
Sbjct: 296  ---GTAKAARNIDMRYGVSKISDSSSSKAWTEKMRTLFIRKGSGFSSRSVITGDAYRHVN 355

Query: 830  EIGIPPYFALRLSYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKS 889
            E+GIP   A R+++ ERV+  N                    Y+ KL   KL L  ++ S
Sbjct: 356  EVGIPIEIAQRITFEERVSVHN------------------RGYLQKLVDDKLCLSYTQGS 415

Query: 890  RISISRKLPSSRGVVVDQGSGDYEFE-GKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVR 949
                 R          D   G  E + G++V+R + DGD+V +NR PT HK S+ A  V 
Sbjct: 416  TTYSLR----------DGSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHSLQALRVY 475

Query: 950  VLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPI 1009
            V + + T++++   CS  +ADFDGD +++ +PQ   ++AE   + +   Q +   +G+ I
Sbjct: 476  VHE-DNTVKINPLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSHTGQLI 535

Query: 1010 RALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSRPC---ASSEKPGQKVFTL 1027
              +  D ++S  ++ ++  FL+     QL     +S   P    +S   P   VF +
Sbjct: 536  LQMGSDSLLSLRVMLER-VFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWTVFQI 544