Moc05g27810 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g27810
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 20307487 .. 20307753 (+)
RNA-Seq Expression	Moc05g27810
Synteny	Moc05g27810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAATTGGTGGAGTTGTTGGACGTAGGAGTGAGAATGGCGGCCAGATTTCACGCTCACTGTCCTCAAACGGCGCGCCTCTATTATCATCCTCCCTCCGATCACGACGACCAACACCATTACTTGCACCAGATTCTGCACGCCTACGACGGCGGCGGCCACTCGACGGCGCACCAGGTGTCGGGCTGTGGAATCGAGACGGCGGCTAGGGCTAGGGCCAGGAGTTTTGATACTGAGATCGTGTTCCACACGGCGGATTTTTGA

mRNA sequence

ATGGCGAAATTGGTGGAGTTGTTGGACGTAGGAGTGAGAATGGCGGCCAGATTTCACGCTCACTGTCCTCAAACGGCGCGCCTCTATTATCATCCTCCCTCCGATCACGACGACCAACACCATTACTTGCACCAGATTCTGCACGCCTACGACGGCGGCGGCCACTCGACGGCGCACCAGGTGTCGGGCTGTGGAATCGAGACGGCGGCTAGGGCTAGGGCCAGGAGTTTTGATACTGAGATCGTGTTCCACACGGCGGATTTTTGA

Coding sequence (CDS)

ATGGCGAAATTGGTGGAGTTGTTGGACGTAGGAGTGAGAATGGCGGCCAGATTTCACGCTCACTGTCCTCAAACGGCGCGCCTCTATTATCATCCTCCCTCCGATCACGACGACCAACACCATTACTTGCACCAGATTCTGCACGCCTACGACGGCGGCGGCCACTCGACGGCGCACCAGGTGTCGGGCTGTGGAATCGAGACGGCGGCTAGGGCTAGGGCCAGGAGTTTTGATACTGAGATCGTGTTCCACACGGCGGATTTTTGA

Protein sequence

MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQVSGCGIETAARARARSFDTEIVFHTADF

Homology

[Close]

BLAST of Moc05g27810 vs. NCBI nr
Match: XP_022154266.1 (uncharacterized protein LOC111021559 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 3.0e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQ 60
          MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQ
Sbjct: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQ 60

Query: 61 VSGCGIETAARARARSFDTEIVFHTADF 89
          VSGCGIETAARARARSFDTEIVFHTADF
Sbjct: 61 VSGCGIETAARARARSFDTEIVFHTADF 88

[Close]

BLAST of Moc05g27810 vs. NCBI nr
Match: KAG6580839.1 (hypothetical protein SDJN03_20841, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017595.1 hypothetical protein SDJN02_19461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.9 bits (320), Expect = 4.4e-26
Identity = 71/93 (76.34%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHD-DQHH-YLHQILHAYDG---GGH 60
          MAK VELLDVGVRMAARFHAHCPQTARLYYHPPSDHD D HH YLHQ   A DG   GGH
Sbjct: 1  MAKFVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDGDNHHNYLHQFFQASDGFRHGGH 60

Query: 61 STAHQVSGCGIETAARARARSFDTEIVFHTADF 89
          ST   V+GCG+ET   A AR FD EIVFHTADF
Sbjct: 61 ST-DLVTGCGVETV--AMARGFDAEIVFHTADF 90

[Close]

BLAST of Moc05g27810 vs. NCBI nr
Match: XP_008443147.1 (PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo] >KAA0043681.1 uncharacterized protein E6C27_scaffold236G00060 [Cucumis melo var. makuwa] >TYK25450.1 uncharacterized protein E5676_scaffold352G005960 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 64/95 (67.37%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQH----HYLHQILHAYDG---G 60
          M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD  H    HYLHQI  AYDG   G
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60

Query: 61 GHSTAHQVSGCGIETAARARARSFDTEIVFHTADF 89
          GHST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 61 GHST-ELVTAYGMKT--MATDGSFDAENVFHSADF 92

[Close]

BLAST of Moc05g27810 vs. NCBI nr
Match: KGN59359.1 (hypothetical protein Csa_002350 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21
Identity = 63/93 (67.74%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1   MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDD-----QHHYLHQILHAYDGGGH 60
           M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD       HHYLHQI  AYD GGH
Sbjct: 35  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDGHHHHHHYLHQIFQAYD-GGH 94

Query: 61  STAHQVSGCGIETAARARARSFDTEIVFHTADF 89
           ST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 95  ST-ELVTAYGMKTV--AMDGSFDAENVFHSADF 123

[Close]

BLAST of Moc05g27810 vs. NCBI nr
Match: XP_011652134.1 (uncharacterized protein LOC105434988 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21
Identity = 63/93 (67.74%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDD-----QHHYLHQILHAYDGGGH 60
          M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD       HHYLHQI  AYD GGH
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDGHHHHHHYLHQIFQAYD-GGH 60

Query: 61 STAHQVSGCGIETAARARARSFDTEIVFHTADF 89
          ST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 61 ST-ELVTAYGMKTV--AMDGSFDAENVFHSADF 89

[Close]

BLAST of Moc05g27810 vs. ExPASy TrEMBL
Match: A0A6J1DN79 (uncharacterized protein LOC111021559 OS=Momordica charantia OX=3673 GN=LOC111021559 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQ 60
          MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQ
Sbjct: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDGGGHSTAHQ 60

Query: 61 VSGCGIETAARARARSFDTEIVFHTADF 89
          VSGCGIETAARARARSFDTEIVFHTADF
Sbjct: 61 VSGCGIETAARARARSFDTEIVFHTADF 88

[Close]

BLAST of Moc05g27810 vs. ExPASy TrEMBL
Match: A0A5A7TQ55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005960 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 64/95 (67.37%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQH----HYLHQILHAYDG---G 60
          M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD  H    HYLHQI  AYDG   G
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60

Query: 61 GHSTAHQVSGCGIETAARARARSFDTEIVFHTADF 89
          GHST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 61 GHST-ELVTAYGMKT--MATDGSFDAENVFHSADF 92

[Close]

BLAST of Moc05g27810 vs. ExPASy TrEMBL
Match: A0A1S3B7E5 (uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 64/95 (67.37%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQH----HYLHQILHAYDG---G 60
          M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD  H    HYLHQI  AYDG   G
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60

Query: 61 GHSTAHQVSGCGIETAARARARSFDTEIVFHTADF 89
          GHST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 61 GHST-ELVTAYGMKT--MATDGSFDAENVFHSADF 92

[Close]

BLAST of Moc05g27810 vs. ExPASy TrEMBL
Match: A0A0A0LEL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.4e-22
Identity = 63/93 (67.74%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1   MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDD-----QHHYLHQILHAYDGGGH 60
           M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD       HHYLHQI  AYD GGH
Sbjct: 35  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDGHHHHHHYLHQIFQAYD-GGH 94

Query: 61  STAHQVSGCGIETAARARARSFDTEIVFHTADF 89
           ST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 95  ST-ELVTAYGMKTV--AMDGSFDAENVFHSADF 123

[Close]

BLAST of Moc05g27810 vs. ExPASy TrEMBL
Match: A0A059DHX5 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02351 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-13
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1   MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYDG 53
           M K VELLD+GVR+AARFH+HCPQTARLYYHPPS+HDD HH+ H+  H+  G
Sbjct: 55  MGKYVELLDLGVRVAARFHSHCPQTARLYYHPPSNHDDHHHHHHRDFHSSGG 106

[Close]

BLAST of Moc05g27810 vs. TAIR 10
Match: AT3G57450.1 (unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-12
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQHHYLHQILHAYD--GGGHSTA 60
          M K  E+LDVGVR+AARFH+HCPQTARLYYHPPSD+   H  +  ++      G G ++ 
Sbjct: 1  MGKYTEMLDVGVRIAARFHSHCPQTARLYYHPPSDNHHHHGGVKDLIGGGGVLGSGQNST 60

Query: 61 HQVSGCGIET 69
            V G G  T
Sbjct: 61 GLVGGLGTGT 70

The following BLAST results are available for this feature:

BLAST of Moc05g27810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154266.1	3.0e-43	100.00	uncharacterized protein LOC111021559 [Momordica charantia]	[more]
KAG6580839.1	4.4e-26	76.34	hypothetical protein SDJN03_20841, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008443147.1	3.8e-22	67.37	PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo] >KAA0043681.1 unc...	[more]
KGN59359.1	1.1e-21	67.74	hypothetical protein Csa_002350 [Cucumis sativus]	[more]
XP_011652134.1	1.1e-21	67.74	uncharacterized protein LOC105434988 [Cucumis sativus]	[more]

BLAST of Moc05g27810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g27810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN79	1.5e-43	100.00	uncharacterized protein LOC111021559 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A5A7TQ55	1.9e-22	67.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7E5	1.9e-22	67.37	uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=...	[more]
A0A0A0LEL3	5.4e-22	67.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1	[more]
A0A059DHX5	2.1e-13	71.15	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02351 PE=4 SV...	[more]

BLAST of Moc05g27810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57450.1	1.3e-12	51.43	unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33983:SF13	SUBFAMILY NOT NAMED	coord: 1..87
None	No IPR available	PANTHER	PTHR33983	OS07G0185900 PROTEIN	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g27810.1	Moc05g27810.1	mRNA