Moc05g25500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g25500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Location	chr5: 18079901 .. 18085522 (-)
RNA-Seq Expression	Moc05g25500
Synteny	Moc05g25500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACGCCTGCATGCCCCTACCGTGCTAACCTCACAAGAGGCCAGCGCCATCGCCAGCACGCGCGTCCGCCTGATGCCAGCGCTACCAACGGCCCGCGCCATCATCATGACCTGTCGCCTACACCTGCACGCCAACGCCCCTACACGCTCAAGCGCCCGCGCGCCTATGCCACCACCAGCGCTCATGCCGCTCGTATCGTACGCTTACCAGCGTCCCTACCGCCCATCGCCAAGCACACTTGCTAGCGCTCTGCCGCACATTACCCAGCGCACCTGCCAGCGGTCTACCACCCATCACCCAGCGCCTATGTCGTACGCCCAGCATCCGTCCGCCCCATCACCCGCGCACGCGCACCCGCACCGCTGTCCATGCGCGCCCCCACTAACGCTAGCTTCCTTGCACGCGCACCACAGCCCCATGGGCACCTCCACCATTTGATGTTGTCGCCCCCCATAGGTGCCCCAACTTGTCTTGCCACCTACTCCTTTAAGGAAAAGATTTCATTTTTATTTCCTTGGATTATTGGGTGGTATTTGTTTTGGATTTATTTTGGATTTATTTCTTTTAGAATTAACAATTTAAATGTACTTTTAGGCAAGTTTTATACTTTTTAGGAATTTATCAATTTTAATTTTCTTTTTAATTTTATTATTTTCCTTAAAAGGCCAAGGGCCTTAGCCTATAAATAGTCTTGTTCCCCTCCGTTGTAAGACATATTGGAATGGTCTTTTGAATAGAATTGAGTTTCTCTCATTGCCGTGTGTAAAACCCTCCTTCAAATCTCGAATCCCTTTGTGTGGTTGAACTTAGGCCTTCGTGTTTGAACCCCTCGGAGCATGCTTGTTCGATTGGTCATCAAACTCGTGGAGTGTTTCCGGCCTCGAGTATAGTGAGTCATCTGTCTACTCAAGGTAACGACTGCAAAGGTAATCCTTCTAACCTTGGCCTTTCGAGTTGATCCAACTATACGATTGGATTCAAGTGGCTTGTGGCTCGAGTAGCTCAATACGCCTGGGTTGTCACGTATCATTACTTGTTTGCTAAAAAATAAGCTAAGCCTAGGTTAATTAGATGGATATTATTGCTACAAGAGTTTGATCTAAAGATAAAAGATATAAAAGGAACAGAAAACCAAGTAGCAGATCATTTGTCAAGGATAGAGTCTTCTTTGCAGCATGATAGTTGTGAGATTAGAGAGCATTTTATCGACGAGCATCTGTTAGTTGTTTCTGAAGTCCCTTGGTATGCTGATTATGCACACTATCTGGTTAGCAATATAATTCCTAATGACTTGAGTAAGCACCATATAAAGAAGTTATTTCATGATGTTAGGTTTTATAGATGGGACGAACCTTTCTTGATTAAACTAGGACCTGACAGTATTCTTCGTAGGTGTGTCACTGAGCATGAACAGAAGGAGATTATAGAGGCGTGCCACAAATCACTATATGGTGGACATTTCGTTGGACGTAAAACTACGACAAAGGTTCTCCAAAGTGGTTTCTTCTAGCCGTCCCTATTTCGAGATGCCCACATATTCACTCAAGGTTGTGACCGTTGTCAAAGATTAGGTAACTTAACACGAAAACATGAGATGCCTTTAAACCCAATATGGAAGTTGAACTTTTCGATGTTTGGGGCATCGCCGGTTGTAGTACGTAACGAGGTCGTATCCACATGGATTTTTGGTTTATATTTTAACGATAAAGGTAGATACCAAAAAATAAAAATATACAAAGCTTAGATATAGATATTATCTAGAAAAAGAAATAAATTAAAGCAATAACAAGACGACAGAACTTGCAAAGGACGATGGTATTGAAGTTGTCAACACCAGAAAGCGATTACGGGGGAATAACATATATGAAGAAGGCAGGGGAGATTTAGCATGCTTTCACAAATTATCAACTTACACTCTAGCGTAGCTAACATTTATTAGTGCCCAGTTCGACTTGGTTCCCTTCCGAGATGATACCCCAAACATGAGTAAATACAACTCCAGTTGCTAATTACCCAAGTAATAAACCAAAACTATAGGCATGATTAGGGGACCCCATTCCTGAGTATCCCTATAGCTATAGAAAAGCGATAACCACAAGCAAAACAAATCAGCACCTACAAGCCCTCTCGGGTCAATACAAAAGCTAGCAACATGAAACAGCGGCCAACAGTAGCGAAGAAATAAACTCAAAATTGCTTAAAAATAAATGTAGCTACTAGAGGTTCGGTCTAAAGTCGGTTACAGCATGTAAATCCCCCTTAAAATGAGGGGTTAGCTCATAATGGGTAAAGAAAACAAAATGGAAGAAGAAGAAATACAACCCATAGCAGAAAAATAGATAAACGACAGAGAAGAAGAAGCAGTCAGCTCGTTTTAGCAGGCGAACTTCCCTTTTATGGCGTCATCTCTCCTCCCGAAAATGGGTATATTCTGTTCCTTGGTCTTTTCAGCTCACAATTTTTGTCTTCCTTGGGATATACGTGTCTATCGGCTAGGGCAACATTCCCAATATCGGGTCTCATTTTTAGGGCACTCGACTGAGGATTGTACGAACATAAGTGAATCTCGTGTTTTGAATTAATTGTACGGACACTTATGCTCTGACATCGCTATGCTCTGACTTGAAAATGCTTTTACTTTTCTTCTCTAGTTCAGCACTTCCTTCTCTTCTTAGCTCTTCTCTAAAAACTTGTGCAAATGAACCACAAATACGAGATTTTATGCTGTTTTTTACCGAAGTTCTCAAGACTAAGGATATTTAGCTAAGAATTTGCAATTAAACACTATTCATGCTAGTTACGACCTAAAACCGACACAGTTTGACATTTTAATGCACATTTTCACCCAAATAATCATCAGAGTAACTCTCTTCTGGAGAGTTATCACACCCCCAAACTTAAATTCTTGCTTGTCCCCAAGCAATAACATGCATTTTAGCTCATAAAACAAAAGAAGGCACCAGAAATCTGCACTTCAAGCAATTTAATCTTCTGCCTCAACCTTTCATTTTTATAAAAAATGCATAGAATTTACATACTTTACTAAGTACCTTAGCTAGAGCAAAGAAGTTCAGGGAACTTAAGTTTGTTTAAACTCTGGAAGAAGCTAATGTTTGCCCAACCTTAACTTCCTTCTACTTCTCAACCTCAAGTTTAACTTCTTCTAGGGATTCCTTTCTCAAGCCCCTTTTCCTAGCTTAAACCTTTAAACCTTGCACAACCAGCGTAGACTTCTTAACCATGGGCTACTAGCCCTTCCCAATCCTGCAGCCTCTTTATGCTTTGGATTTGGGCTACTAGCCCTTCCTTTATTTGAACTTTTTTTTTCTTTTTTTTAAGGGCTGAATTACAGGATTAGAAAGATTCACTGTTCTATACAATTGCTAATAAAGATGTAAGAACTGAACGTTCACTCCCCCAAACTTAAAATGATGCATTGTCCTCAATGCGACTAAGAACATCTACGATGAAAAGCTCTAGCATACCTCAAACTTAAAGGCAACATAGAATGAGATACAAGGTTATTCGCTATCACTGTATACAGATAGGGTTAGTGCTATCATCTAATGGGGATTTAAAAGAAGAAGTTCAAGCTAGCAATACAAAGATAAGGGCCGGCTTTGGATAGAGAGCCTGTGAAATTCCTACCTATAGAAGCCCTACCTAGGGCTTATACTACGAGAGGGAAGCTAGGGCATGGCAGGTAAACATGAACCAGAGGATGAACATGTTGGGTGTGTTGCCCTGAACTCGTAGTTTGTATTTATGTAGAAACAAATGTATATTCAATAAAGTTTTATTCAATAAATTTCTTGTTGAATTCATAGCATTGCATTGTCCAAAATCCAATAAACTAAACATCTAAGGTTATTTTCATGTAACCGGGACATGATATACGAGGTATATATATTTGATGTACCCCTGATATACGAGTGGATAATGTCTCGTAAATAACCTAAAGGGTCTATAGTATATGGATAAGACTGGGTACCTTATCAATAGCAACACTATGGATACGGCCCACTTTGTAAATGTTACAGATGACTCGATCCAGGTTGTTCGTGTGGAGATATGCTAGTGGGGGTATCCTATACAATGAGTTTGTATAAGACCGGACTACGAAATAGACAATCTTTAGATGTAACACCGTTGACTAACAGATTGCTATTTCATAAGATGACCAAACAACTCATTTTCAAACCTGAGTGAGTTATGGACTCTTGCCCGTGAAGGCTCGTCCTTTGAACTATATGGGTGAGAGTGGCCCGAGTTGCCGACTCAATATTCCTACCATTTTGGGGACGAGACCGAGTGGGGAGCTGGAAACATAACTTCACAAGATGAAAGAGTCGTCTGTAACATTTACCAACTGGGCTGTATCGATAGTGTTGCCAAGATAAGGTACCCAGCTTTATCCATATACTATAGACCCTTTAGGTTATTCACGGGACATTATCCACTCGTATATCAGAGGTATATCAAATATATACCTCGTATATCAGGGGTATATCAAATATATACCCAGTATATATACTGCCCCGGTTACATGAAAATAAGCTTGGATATCTAGTTTATTGGATTAGGGACAATGCAATGCTATGAATTCAACAACAAATTTATAGAATAAAACTTTATTGAATATATATTTATTTCTACATAAATACAAACTACGAGTTTAGGGCAACACACCCAACGAAAAAGAAAGCAAGCTACACTAAATGCTCCAGCATCAACAGTAACACTGCACACTTAGCAGGCTCTAGCATATGACCTTTGCACCAAACTCAATGCAGAAGAAAAAAGATGAGAACACGGAAATTTTCAGAACTTCTAACTTTCATTTAATTTCTGGGGGAGGGGGGGTCACAATCTTACAAAATAAAATAAAAACAACTAGAATTCAAATTAAACTACTAAACAGTAAAATAAAATACAAAAATTTAAATGCAAAAATTAAAACCTAAGTAAAAAAATTCAGAAATAACATGGGGGACAATGTTTTGGTCAGGTCAAAAGGACAGGGACTTCCTTTTGTTGGTCAAGCGGAACTCTCTTCTTCCTCTGAAGAGTCGTCTATTGGCTGATCTTCCTCTTCAGAGCTGTCGGATTGCTCTATCAATTGTTTCAAGCGGGCCGGCACAGCGAATGAGGAGAGGGCTGCTGCTTTAAAATGCTCCAGCGCTGTCAGGATAGTCGCATCTCTTTTCTTAGCCTTCTCAGCAAATGTGGATTGCGCTTCCTCCATTCGTGAGAGCTGCTTTTGCATTTTTGCAAACTGGGCCATCATTTCATTGATGACCTTATTCTACACAGCTCCACGACGAGTGGGGTCCTGGTTCATAAGCCTTTCCACCGTATTCCTATCTATTACCAACTTGTCCTTGAAGGGCTATTCATCATCCAAGATGGGCACATCTCTGAAGGCAGATTTTGGTGATAAGGCTTGGGAAAAACAGACAGTCGGTTTTCTTCGTTGCGTACTAAGCATTCTCCCAGTGGATGAGTTGTCCGACGTCTATAGAGCGACTTTGCAAAATACAGGCCAACAAAAGAACTCCGTCCTTCGTAACAGACGAATCATGTGTGGTAGGCATGACCCGGCACTTAACGAATTATAG

mRNA sequence

ATGCCAACGCCTGCATGCCCCTACCGTGCTAACCTCACAAGAGGCCAGCGCCATCGCCAGCACGCGCGTCCGCCTGATGCCAGCGCTACCAACGGCCCGCGCCATCATCATGACCTGTCGCCTACACCTGCACGCCAACGCCCCTACACGCTCAAGCGCCCGCGCGCCTATGCCACCACCAGCGCTCATGCCGCTCGTATCCATGATAGTTGTGAGATTAGAGAGCATTTTATCGACGAGCATCTGTTAGTTGTTTCTGAAGTCCCTTGGTATGCTGATTATGCACACTATCTGGTTAGCAATATAATTCCTAATGACTTGAAGCTGTCGGATTGCTCTATCAATTGTTTCAAGCGGGCCGGCACAGCGAATGAGGAGAGGGCTGCTGCTTTAAAATGCTCCAGCGCTGTCAGGATAGTCGCATCTCTTTTCTTAGCCTTCTCAGCAAATGTGGATTGCGCTTCCTCCATTCGTGAGAGCTGCTTTTGCATTTTTGCAAACTGGGCCATCATTTCATTGATGACCTTATTCTACACAGCTCCACGACGAGTGGGGTCCTGGTTCATAAGCCTTTCCACCGTATTCCTATCTATTACCAACTTGTCCTTGAAGGGCTATTCATCATCCAAGATGGGCACATCTCTGAAGGCAGATTTTGGTGATAAGGCTTGGGAAAAACAGACAGTCGGTTTTCTTCGTTGCGTACTAAGCATTCTCCCAGTGGATGAGTTGTCCGACGTCTATAGAGCGACTTTGCAAAATACAGGCCAACAAAAGAACTCCGTCCTTCGTAACAGACGAATCATGTGTGGTAGGCATGACCCGGCACTTAACGAATTATAG

Coding sequence (CDS)

ATGCCAACGCCTGCATGCCCCTACCGTGCTAACCTCACAAGAGGCCAGCGCCATCGCCAGCACGCGCGTCCGCCTGATGCCAGCGCTACCAACGGCCCGCGCCATCATCATGACCTGTCGCCTACACCTGCACGCCAACGCCCCTACACGCTCAAGCGCCCGCGCGCCTATGCCACCACCAGCGCTCATGCCGCTCGTATCCATGATAGTTGTGAGATTAGAGAGCATTTTATCGACGAGCATCTGTTAGTTGTTTCTGAAGTCCCTTGGTATGCTGATTATGCACACTATCTGGTTAGCAATATAATTCCTAATGACTTGAAGCTGTCGGATTGCTCTATCAATTGTTTCAAGCGGGCCGGCACAGCGAATGAGGAGAGGGCTGCTGCTTTAAAATGCTCCAGCGCTGTCAGGATAGTCGCATCTCTTTTCTTAGCCTTCTCAGCAAATGTGGATTGCGCTTCCTCCATTCGTGAGAGCTGCTTTTGCATTTTTGCAAACTGGGCCATCATTTCATTGATGACCTTATTCTACACAGCTCCACGACGAGTGGGGTCCTGGTTCATAAGCCTTTCCACCGTATTCCTATCTATTACCAACTTGTCCTTGAAGGGCTATTCATCATCCAAGATGGGCACATCTCTGAAGGCAGATTTTGGTGATAAGGCTTGGGAAAAACAGACAGTCGGTTTTCTTCGTTGCGTACTAAGCATTCTCCCAGTGGATGAGTTGTCCGACGTCTATAGAGCGACTTTGCAAAATACAGGCCAACAAAAGAACTCCGTCCTTCGTAACAGACGAATCATGTGTGGTAGGCATGACCCGGCACTTAACGAATTATAG

Protein sequence

MPTPACPYRANLTRGQRHRQHARPPDASATNGPRHHHDLSPTPARQRPYTLKRPRAYATTSAHAARIHDSCEIREHFIDEHLLVVSEVPWYADYAHYLVSNIIPNDLKLSDCSINCFKRAGTANEERAAALKCSSAVRIVASLFLAFSANVDCASSIRESCFCIFANWAIISLMTLFYTAPRRVGSWFISLSTVFLSITNLSLKGYSSSKMGTSLKADFGDKAWEKQTVGFLRCVLSILPVDELSDVYRATLQNTGQQKNSVLRNRRIMCGRHDPALNEL

Homology

[Close]

BLAST of Moc05g25500 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 5.7e-11
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 68  HDSCEIREHFIDEHLLVVSEVPWYADYAHYLVSNIIPNDL 108
           HDSCEI+EHF+DE+LL +SEVPWYADYA+YLVS IIPNDL
Sbjct: 699 HDSCEIKEHFVDEYLLAISEVPWYADYANYLVSKIIPNDL 738

[Close]

BLAST of Moc05g25500 vs. NCBI nr
Match: XP_022158988.1 (uncharacterized protein LOC111025433 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 9.4e-06
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 38  DLSPTPARQR-----PYT--LKRPRAYATTS-AHAARIHDSCEIREHFIDEHLLVVSEVP 97
           DL   P ++R     P T  +  P    T S A   + HDSCEI+EHF+DE+LL +SEVP
Sbjct: 98  DLGTNPFKERGDDANPTTDPMNVPEGPITRSKAKKIQEHDSCEIKEHFVDEYLLAISEVP 157

Query: 98  WYADYAHYL 99
           WYADYA+YL
Sbjct: 158 WYADYANYL 166

[Close]

BLAST of Moc05g25500 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-11
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 68  HDSCEIREHFIDEHLLVVSEVPWYADYAHYLVSNIIPNDL 108
           HDSCEI+EHF+DE+LL +SEVPWYADYA+YLVS IIPNDL
Sbjct: 699 HDSCEIKEHFVDEYLLAISEVPWYADYANYLVSKIIPNDL 738

[Close]

BLAST of Moc05g25500 vs. ExPASy TrEMBL
Match: A0A6J1DXK6 (uncharacterized protein LOC111025433 OS=Momordica charantia OX=3673 GN=LOC111025433 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-06
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 38  DLSPTPARQR-----PYT--LKRPRAYATTS-AHAARIHDSCEIREHFIDEHLLVVSEVP 97
           DL   P ++R     P T  +  P    T S A   + HDSCEI+EHF+DE+LL +SEVP
Sbjct: 98  DLGTNPFKERGDDANPTTDPMNVPEGPITRSKAKKIQEHDSCEIKEHFVDEYLLAISEVP 157

Query: 98  WYADYAHYL 99
           WYADYA+YL
Sbjct: 158 WYADYANYL 166

The following BLAST results are available for this feature:

BLAST of Moc05g25500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154847.1	5.7e-11	82.50	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]	[more]
XP_022158988.1	9.4e-06	50.72	uncharacterized protein LOC111025433 [Momordica charantia]	[more]

BLAST of Moc05g25500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g25500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMT3	2.8e-11	82.50	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia...	[more]
A0A6J1DXK6	4.6e-06	50.72	uncharacterized protein LOC111025433 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc05g25500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g25500.1	Moc05g25500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding