Moc05g25420 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g25420
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Locationchr5: 18029290 .. 18036828 (+)
RNA-Seq ExpressionMoc05g25420
SyntenyMoc05g25420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGAGTCCTTAGATCTCACGACCCCTGAGCTTAGATTATTGAAGCCTTCTGTTGAAGATACGCCAGTGCTGGAGCTTAAAGCATTGCCGCAGCATCTGAAATATGCTTACTTGGGTTTGTCAGAAACATTGCCTATTATCATAGCAGCGGACTTACCCTTGGAGAAGGAGCAAATTCTGTTGAGTGTGCTTACGGCACATCAGAGAGCAATTGGTTGGACTATTGCTCATATAAAAAAGATAAGCCCCAACTTCTGTATGTATAAGATAGTACTAGAGGAGGATTGTAAGAACTCCATTGAGCCCCAGCGTAGACTAAACCCAGCTATGAAGGAGATGGTGAAGAAAGAAATCATCAAGTGGTTAGACGCAAGCATCATATACCCAATCTCAGATAGCGAGTGGGTAAGTCTAGTGTAGTGTGTGCCTACGAAAGGGGGCATGACTGTAGTGGAGAATGCAAAGAATGAGTTGATACCCATGAGGACAATAACTGGATGGCGTATATGTATGGACTATTGTAAACTGTACAAAGCCACCAAGAAGGACCACTTTTCTCTCTCCTTCATTGATCAAATGCTGAACAGACTTGCAGGTCAGGAGAACTACTGTTTTCTCGACGGGTACAGAGGGTATAATCAGATTATAATAGCCTCACAAGATCAGCAGAAGACGACATTTACGTGTCCCTACGGAACGTTCGCTTTCAAACGAATGCTATTCGGGCTTTGTAATGCCCCAGCAACGTTCCAGAGGTGCATGATGACCATCTTTTCTGACTTGGTAGAATCAGTAGTTGAGGTGTTTATGGACGAATTTTCAGTCTTTGGAAAGTCATTTGCAGAATGCTTGGATAATCTGAAGAAGGTACTATAAAGATGTGAAGAAACAAACCTAGTATTGAACTGGGAAAAATATCACTCCATGGTGTATGAGGGAATTGTGCTGAGGCACAGAATCTCCAGCAAGGGCATAGAAGTAAACAAATTGAAGATAGAGGCAATAGAGAAATTGCCCTCACTTGTGAATGTCAAGGGCATCTGCAGTTTCCTGAGACATGTCGATTTTTATTGTAGATTCATAATGGATTTTTCGAAAATCTCTAAACCTCTGTGTTCTTTGCCTGAGAACGATAAAAAATTTAACTTCACATCTGACTGTTTGTAGGCGTTCAAAACACTGAAACATGTTTTCACCCATGCTCTGATAATGACAGCACCAGATTGGAACCAGCCCTACGAATTACTGTGCGATGCCTGTCACAGAAAATGCTTACCGCAAGTGTATGAGTCAAGTTTTAATAAAGTGGTAAGTCAATACCAATATCGTCCTCTGTATTGCGTTTCTAGATCACTCAAGTACCACAGATACAATCGCTCCATTTTATTTAGAGAATCAAAATCAAATTGGAGAATACAATCAAAGAAAATAAACATACAATAACAAAGATAAAAACAACGGGGAGAAAAGTCCTAGGGAATTGATTTCACCTATTGAATCTATGAACCAACTACTTAATTACTCAATATTGAACAAATTATTAATTCTATAGGCCAAGAACCCTCAAATCTCAACTGCCTCTCCCGAGCGCAAGCTAATTCTCCTTACCAATTATGAAACCAATATCCTTATCTAGTTTCTATAACAAGTAAAGGTTATTGGACAAGTTTTTTAACAACCTCTAAATAACTTCTAAATCTCCCGATCTTAAAACCCGTTTAGTTATGCATCCATGTTCTAACTCTAAACCACCTCTCCCGAGCGTAAGATTTCAAGTCTAAAATCAATCAATATATGGCCAGTAGATTTAAGTCATTAAGCATAGAGAAGCATAAGTAGAACATTCACAAACATTCAATCAAGAAAACTAAACAATCAATGCATAAAGTTCAATGGCTACATCAATCCCTAAGATAAGAGGTTAGCTTCTCATATTCAATGGAAAACAATAAAATCACAATGAGAAATCCATAACAAAACTAGAAAAACCAAGAGAAAGGAGAAGAAACTATGTTCCGCGTGTCAATCGTCCGTTCCCAAAGCCACCTCCACGATCCCGAGCCTTGAAAATCACTTTTCTAAGCTCTCCAATGACTCCTTGCCCTCCAAATTGGCCAAAAAGCCAAACTTCCAAAAAACCTCTTGTAAACTCCTCCCTCTCGGTGGCAGCACAACCGTATTTTTACAAAAAGTTGTTGCAGCAGCGCCATGGTGCTACACACAGGGCCATGGCGCTATACTATTCACAAAACGTGAAATTTAAACTTCGGAGCGCCGCAGCGCTCTAGGCTAGCGCCGTGGCGCTATCTTCTCTGGTTTTTGGCTTCAAATCTTGTTCTTATTCCATCTTGATCACTTTGATTCTAATTTTCTCTCATTTTGATCCAAATAAATCTTGTTTCCTCCCGATACTTTATTCCTGCAAAATATATCTTATGTACTTAAATTTGTCATGAAGAAACGAAAACTAACAAATAATTTCAATTTAAATCTCATGAAATGTAGCTCACAAAGTGTGCTACCAAATACCCGCAAACTTGGCTTTTTTGCTTGTCCTCAAGCAAACATAACTACTTTAAATCCAATGATTCTCATGTATAATACAGAAAAGTTAAAGGGTGTAAATCTCATCTTATCAAATTCTCCCCACCTAAATCATGTTTATCCTAAATATATCTTAACTCAATATACTGAATCCTCTTTCTAATCCTCTTTTATCTTTTTTAATAACCAATAATACAAGTAAAGTCAATCACACATCTATGAGATGAATCAAAATGACAATCAAGAGAATTAACAATGGTAGGATATAATTTTTAAAAACTCAAGAATTTCATTAACTCATTGAAATCAAATGCAAAGACTTAACACCCTCACGGACTTTCACTCAAATCTCTCAAAGTGTTTTTAGGGTGTTTTTACTCTCAAACCAAAACAAAGCATGTTATTATCATAGGCTTGCAAATGAATCAAATCTCCCTACTTAAAGATGAATTGAATGTAAAAATTAAAAGGACTTTAATAATGGTTGTAATGGGGCTTAGGTAAGGGTGAGATAAAAGGAATTTGAGAGGCTCAAAATCAACACAAAGGAGATATTAGATTGCATGCTAACTACAATGTACTGAAGCCAATGAACAATGAATACAATGCACCATTAAACACTAATACTCCTTGAGAAATACAAGAATCTATTGCTGCTTGAAAGATATTTCTCCAAATGATTTCTCTACAACACTCAACAAAGAAGAATATACCCTTATATACACTTTTTTTTTTCATTTTCTTTTCAACCATACTTCTTTTCTCTTTTTTCTTCTTCTTCTTTTTTTCTCTTTTTTTCCATTTTAGCTTACAAATCTGGGTTGAACCGAAACAAGTTAGATCATGCAACTTTTGCTCCTTATCTTGACACTGGTAAAAAGAAATATGGAGGATAATATTCGAAACAGGCCTCAGGGTTAATAAATGTGTTAATTCCAAGAAAAAGAATGGGAAATTAGGCTCAAATATGGCTCTCTAAAGAAAAATATAACAAAGTATGCTCTTTAGAAGTCTCAAATTGTGGGTAAGCATAAATTTCCCTTATCATATTAAAACACAAATTCAAACAAGTGGTCACAAAATGCATTCACCAACAAGTTCTAGAATAAATATGCCAAGTTCGATCACACACAAGAATAAAAATGAGCAAGATGTAATGGATTGCTCTAAAGCTCAAATGCATTTTTCAACCAAGAAATAATGAGATACCATCATGTAATTTATAAAACAGAATCAATCATGCTTATCTCCTTCATGCATAAGAAATCAAACTCAAAATGCGTTCATAACTTACAAAGTATTCAAGGGTATCAATCAAGATTCAAAGTTTCGAAAGGAGAAATCAGCACATATGAATCATGATACATACTGAGTCAAAAGCATGAAAAAGATGACAAAAATCTTCACCCCCAAACTTAACGATTACATTGAAAGGTAGATATAGCACAACAAACATGCAACATAACATCCATCAAGCTAATAAGCGGTCTTTAATCAATCCAAAATACAACAAATCCCTCCAAACTTAAAAATTGCATTGTCCTCAATGTAACAAAATATACGAATGGAGTAGACAACGAGGACAAAGAAAATGAAAAGGGGAAAGAACATTCTGCCCTGAATTTAATATCAATATTCCATAGCTCTAAGACGTCTAGACACACCACCAAAATCTACATTAAGCCTTTATGAAACACAAAAAGTAATGAGAAAAAATAAATCTAAAGAAACTAAGATAACATAAAAACAAAAACAAACTGAAAAAAAAGTTTGGATTGCCTCCCAAAAAGCGCTTTATTTAACTTCTGTAGCTAGACGTGGCTCTCTTTTATTTTATTTTTCTTAAGGTGTATAAAACTCCTCAATTTTGTTGGGTCCCTTCTTCCTTGAATCGATGTATCCTACTAGCTCTAGTAGGCTCATTTGCTTTTCATGGGCACCTGAAAGAGAGAAATTTTTATAATATAAATTAGGAAGGTTAAAGAAAAATAAATCAAAATCATATTTACAAGACTCTTTAGGATAAAGAAAGAAAATATGAGAATTAAGAGAATTTTCAAAGGATAAAATAGGAGTAGGCTTTTCAGCCTCTTCCTTTATCACTTGAAATTCATCTTCCAAATTAGGCTCATGTTCTTTCTTTATCACACAAAACTATACTTCCTGGTGTTGCTCAAATTTTTCCAACTCAATCCCACTGTCAATTCAAATAGCTTCACGGGTTTCTGCCTGCTCAAAGTTCTCCAACTCATCCCCACTATCAATGCATACAACTTTATAAGTTTCTGCCTCAATGGTATGGAAAAAATTTTGCTCATGAAGGGCTTTAATTGAATCAACTATCTGACTAAGTTGTATTTCCAAACGCCCTATAGCAGCTCCATTTTCTTCAATTGTGGCCTCCATCCTATCCACTTTAGCCTCTATCCTATTCATCCTTTCTGATTATTCTGCACAAAGATTTTTAATTCTACATTCCAATGTATATTCTCGCAATAACTCTTCAAAGGACGAATTTTCCTCACTCTGGTTGGGATAATTTTGGCTCCAAGTACCTTCATTGTCACCATATAAAGAATTTCCATATCTCATACAATCAAAATGATGATAATTAGGCACTTGACTTTCCTGAAAACACACATAATTAACATAAGAATTCTCATGGTCATAAGAGGGGTAAATTGAAGAAGAATTAAATAAGACTCCTCATAAGGCCACTCGTAGTTATAAAAACACATTATTCACATAAAGGCATACATCACTCAACCAAGCAACCACGAAAACGATACACAACAATAAAAATTAAAAAAAAAATCAAGATAAAGGGAAAAAATCAAGATACAAAAAATATATACAAAATAGAAGAAAAAAACTCTAAATTACGACCAAGCAAGTTCTCCACGATATCAAGTGAAACTAAATAATTGCCAATCCTCGGCAATGGCGCCAAAAACTTGTAGCAGAAAATGCTTACCGCAAGTGTACGAGTCAAGTTTTAATAAAGTGGTAAGTCAATACCAATATCGTCCTCTATATTGCGTTTCTAGATCACTCAAGTACCACACATAAAATCACTCCATTTTATTTACAGAATTAAAATCAAATTGGAGAATATAATCGAAGGAAATAAACATACAATAACAAAAATAAAAACAATGGGGAGAAAGGTCCTAGGGAGTTGATTTAACCTATTGAATCTATGAACCAGCTACTTAATTACTCAAGATTGAACGAACTATTAATTCTATAGGCCAAGAACTCTCAAATCTCAACTGCCTCTCCTGAATGCAAGCTAATTCTCCTTACCAATTATGAAATCAATATCCATATCTAGTTTTTATAACAAGTAAAGGCTTTATTGAACGAGTTTTTTAACAACCTCTAAAGAACTTCTAAATCTCCCGATCTTAAAACCCCTTTACTTATGCATCCCAGTTGTAACTCTAAACCACCTCTCTCAAGCGTAAGATTTCAAGTCTAAAATCAATCAATCTATGGCCAGTAGATTCAAAGCATTAAGCATAGAGAAGCATAAGTAGAACATTAATAAACATTCAATCAAGAAAACTAAACAATCAATGCATAAAGTTCAATGGCTACATCAATCCCTAAGATAAGAGGTTTAGCTTCTCATATTCAATGGAAAACAATAAAATCACAATGAGAAGTTCGTAACAAAACTATAAAAACCAAGGGAAATGAGAAGAAACTATGTTCCGCGTGTCAATCGTCCGTTCCGGAAGTGACCTCCACAATCCCGAGCCTTGAAAATCACTTTTCTAAGCTCTTCAATGACTCTTTGCCCTCCAAATTGGCCAAAAAGCCAAACTGCCAAAAAAACCTCTCCCAAACTCCTCCCTCTAGGCGGCTGCACAACCCTATTTTTATAAAAGTTATATTGAGCAAACTAATAAACTTAGATAATTTCATTTAGCCGATTTTACCTAAGTAATAAACCCTAGTTGTAAAATACTAATTGGGAGGATTAGCTGTATATATAATATACCAAGTATACGAGATATATGTAGTATATATACATACATTATTTCCCTCACGTTCTCCATATAAGTTCACATCGTGAGTTCCATGCTCGGCCTCGGGTGCCCTGGGTGCAGCCTCCCTACAGAAGGTGTTTGTATGGTTCAATACCAAGGTGAATGGAGAAATTATTTGTAGTAAGTGGGAGAAAGACGTGTGACAACACATCCTACGTCTCCTCCATTGGTTTGCAACGTGATATTTCATACACGACCTGCGTGTCGTCCTAGAGCGACCACCCCTACGGAGGGTCCTGTTGTATGGAATCAAAACCAGGGCGAACTCCAGAAATGGATAAGGTCTCTTAGGTTTTGCACTAATATTTGTCCTTCCCTACGGCAGGCTTATTGGGACGGATCTCTGGGGTTTGAAAATGGCGGGTCACACTTACAGGAAGTTGTTAAGTTAGTTAATAACTTTTTGACCAAACAAATAGTGACTAAATATTATAGGAATAAGAGTTATTCTAGTGTAATATTTTGTTGAGAATGTCTCAATTCAGTGAAGGAGTAGTTGACTGCCCCACGGTAACTGTTATTCTAAATCACTGAAGCATCGTCGCAAAAATAATCTTGATTAATAGGGTGCATTATTACTTTTTGCTAAAATTGATTGAGTTTTAATGGGTAGTGCAAGTGTCTAATATAGACTTGTTTGTATTTCAGCATGTTTACTTCCGTTATTGCCCTGCTTGCCGTCGAAAAACTTAACGGTGAAAATTATACACAATTGAAAATGAACTTTAACACGATACTCGTGGTAGATGATCTTAGGTTCATTTTAACTGAGGAGTGCCCTCAAGCTCCCACGCTTAATGCAGCCCGAGCCAGTTGGGATGCCTATGACACTTGGATCAAGGCCAATGACAAAGCCAAGGTCTATATCTTGGCAAGCATATCTGATGTGCTGGCCAAGAAGCATGAGAGCATGGTCACCGCAAGGGAGATCATTTGA

mRNA sequence

ATGCATGAGTCCTTAGATCTCACGACCCCTGAGCTTAGATTATTGAAGCCTTCTGTTGAAGATACGCCAGTGCTGGAGCTTAAAGCATTGCCGCAGCATCTGAAATATGCTTACTTGGGTTTGTCAGAAACATTGCCTATTATCATAGCAGCGGACTTACCCTTGGAGAAGGAGCAAATTCTGTTGAGTGTGCTTACGGCACATCAGAGAGCAATTGTGGGAGAAAGACGTGTGACAACACATCCTACGTCTCCTCCATTGGTTTGCAACGTGATATTTCATACACGACCTGCGTGTCGTCCTAGAGCGACCACCCCTACGGAGGGTCCTGTTGCTTATTGGGACGGATCTCTGGGGTTTGAAAATGGCGGGTCACACTTACAGGAAGTTGTTAACATGTTTACTTCCGTTATTGCCCTGCTTGCCGTCGAAAAACTTAACGGTGAAAATTATACACAATTGAAAATGAACTTTAACACGATACTCGTGGTAGATGATCTTAGGTTCATTTTAACTGAGGAGTGCCCTCAAGCTCCCACGCTTAATGCAGCCCGAGCCAGTTGGGATGCCTATGACACTTGGATCAAGGCCAATGACAAAGCCAAGGTCTATATCTTGGCAAGCATATCTGATGTGCTGGCCAAGAAGCATGAGAGCATGGTCACCGCAAGGGAGATCATTTGA

Coding sequence (CDS)

ATGCATGAGTCCTTAGATCTCACGACCCCTGAGCTTAGATTATTGAAGCCTTCTGTTGAAGATACGCCAGTGCTGGAGCTTAAAGCATTGCCGCAGCATCTGAAATATGCTTACTTGGGTTTGTCAGAAACATTGCCTATTATCATAGCAGCGGACTTACCCTTGGAGAAGGAGCAAATTCTGTTGAGTGTGCTTACGGCACATCAGAGAGCAATTGTGGGAGAAAGACGTGTGACAACACATCCTACGTCTCCTCCATTGGTTTGCAACGTGATATTTCATACACGACCTGCGTGTCGTCCTAGAGCGACCACCCCTACGGAGGGTCCTGTTGCTTATTGGGACGGATCTCTGGGGTTTGAAAATGGCGGGTCACACTTACAGGAAGTTGTTAACATGTTTACTTCCGTTATTGCCCTGCTTGCCGTCGAAAAACTTAACGGTGAAAATTATACACAATTGAAAATGAACTTTAACACGATACTCGTGGTAGATGATCTTAGGTTCATTTTAACTGAGGAGTGCCCTCAAGCTCCCACGCTTAATGCAGCCCGAGCCAGTTGGGATGCCTATGACACTTGGATCAAGGCCAATGACAAAGCCAAGGTCTATATCTTGGCAAGCATATCTGATGTGCTGGCCAAGAAGCATGAGAGCATGGTCACCGCAAGGGAGATCATTTGA

Protein sequence

MHESLDLTTPELRLLKPSVEDTPVLELKALPQHLKYAYLGLSETLPIIIAADLPLEKEQILLSVLTAHQRAIVGERRVTTHPTSPPLVCNVIFHTRPACRPRATTPTEGPVAYWDGSLGFENGGSHLQEVVNMFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYDTWIKANDKAKVYILASISDVLAKKHESMVTAREII
Homology
[Close]
BLAST of Moc05g25420 vs. NCBI nr
Match: XP_022157449.1 (uncharacterized protein LOC111024145 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-34
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 0 

Query: 135 TSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYDTW 194
           TS+IALLA EK N ENYTQ K N NTILVVDDLRFILTEECPQAPT NAARAS DAYD W
Sbjct: 42  TSIIALLAAEKFNSENYTQWKTNLNTILVVDDLRFILTEECPQAPTPNAARASRDAYDRW 101

Query: 195 IKANDKAKVYILASISDVLAKKHESMVTAREII 228
           IKANDKA VYIL SISDVL+KKHESMVTAREI+
Sbjct: 102 IKANDKANVYILTSISDVLSKKHESMVTAREIM 134

[Close]
BLAST of Moc05g25420 vs. NCBI nr
Match: XP_022158202.1 (uncharacterized protein LOC111024739 [Momordica charantia])

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-32
Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 0 

Query: 133 MFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYD 192
           M TSVIALLA+EKLNG+NYTQ K N N ILVVDDLRF+LTEEC Q PT NA RAS DAYD
Sbjct: 1   MSTSVIALLAIEKLNGKNYTQWKTNLNAILVVDDLRFVLTEECRQPPTPNAVRASRDAYD 60

Query: 193 TWIKANDKAKVYILASISDVLAKKHESMVTAREII 228
            WIKANDKAKVYI ASISDVLAKKH+ MVT REI+
Sbjct: 61  RWIKANDKAKVYIFASISDVLAKKHDRMVTTREIM 95

[Close]
BLAST of Moc05g25420 vs. NCBI nr
Match: XP_022156751.1 (uncharacterized protein LOC111023591 [Momordica charantia])

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-31
Identity = 73/90 (81.11%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 138 IALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYDTWIKA 197
           IALLA +KLN +NYTQ K N NTILVVDDLRF+LTE+CPQAPT NAARAS DAYD WIKA
Sbjct: 5   IALLAAKKLNDKNYTQWKTNLNTILVVDDLRFVLTEKCPQAPTSNAARASQDAYDRWIKA 64

Query: 198 NDKAKVYILASISDVLAKKHESMVTAREII 228
           NDKAK+YILA+IS+VLAKKH+SMVTAREI+
Sbjct: 65  NDKAKIYILATISNVLAKKHKSMVTAREIM 94

[Close]
BLAST of Moc05g25420 vs. NCBI nr
Match: XP_038881660.1 (uncharacterized protein LOC120073110 [Benincasa hispida])

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-29
Identity = 67/95 (70.53%), Postives = 80/95 (84.21%), Query Frame = 0 

Query: 133 MFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYD 192
           M +S+I LLA EKLN +NY+  K N NTILVVDDLRF+LTEECP+APT NA R  W+AYD
Sbjct: 1   MNSSIIQLLAFEKLNDDNYSAWKSNLNTILVVDDLRFVLTEECPKAPTSNANRTVWEAYD 60

Query: 193 TWIKANDKAKVYILASISDVLAKKHESMVTAREII 228
            W+KAN+KA VYILA++SDVLAKKHES+ TA+EII
Sbjct: 61  RWVKANEKAHVYILANMSDVLAKKHESLTTAKEII 95

[Close]
BLAST of Moc05g25420 vs. NCBI nr
Match: XP_038889295.1 (uncharacterized protein LOC120079204 [Benincasa hispida])

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-29
Identity = 67/95 (70.53%), Postives = 79/95 (83.16%), Query Frame = 0 

Query: 133 MFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYD 192
           M + +I LLA EKLNG NY+  K N NTILVVDDL F+LTEECPQAP+LNA R  W+AYD
Sbjct: 1   MNSLIIQLLASEKLNGRNYSAWKSNLNTILVVDDLSFVLTEECPQAPSLNANRIVWEAYD 60

Query: 193 TWIKANDKAKVYILASISDVLAKKHESMVTAREII 228
            W+KAN+KA+VYILAS+SDVLAKKHES+ T +EII
Sbjct: 61  RWVKANEKARVYILASMSDVLAKKHESLATTKEII 95

[Close]
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match: A0A6J1DWI4 (uncharacterized protein LOC111024145 OS=Momordica charantia OX=3673 GN=LOC111024145 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 0 

Query: 135 TSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYDTW 194
           TS+IALLA EK N ENYTQ K N NTILVVDDLRFILTEECPQAPT NAARAS DAYD W
Sbjct: 42  TSIIALLAAEKFNSENYTQWKTNLNTILVVDDLRFILTEECPQAPTPNAARASRDAYDRW 101

Query: 195 IKANDKAKVYILASISDVLAKKHESMVTAREII 228
           IKANDKA VYIL SISDVL+KKHESMVTAREI+
Sbjct: 102 IKANDKANVYILTSISDVLSKKHESMVTAREIM 134

[Close]
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match: A0A6J1DWL4 (uncharacterized protein LOC111024739 OS=Momordica charantia OX=3673 GN=LOC111024739 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32
Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 0 

Query: 133 MFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYD 192
           M TSVIALLA+EKLNG+NYTQ K N N ILVVDDLRF+LTEEC Q PT NA RAS DAYD
Sbjct: 1   MSTSVIALLAIEKLNGKNYTQWKTNLNAILVVDDLRFVLTEECRQPPTPNAVRASRDAYD 60

Query: 193 TWIKANDKAKVYILASISDVLAKKHESMVTAREII 228
            WIKANDKAKVYI ASISDVLAKKH+ MVT REI+
Sbjct: 61  RWIKANDKAKVYIFASISDVLAKKHDRMVTTREIM 95

[Close]
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match: A0A6J1DVX8 (uncharacterized protein LOC111023591 OS=Momordica charantia OX=3673 GN=LOC111023591 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.7e-32
Identity = 73/90 (81.11%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 138 IALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYDTWIKA 197
           IALLA +KLN +NYTQ K N NTILVVDDLRF+LTE+CPQAPT NAARAS DAYD WIKA
Sbjct: 5   IALLAAKKLNDKNYTQWKTNLNTILVVDDLRFVLTEKCPQAPTSNAARASQDAYDRWIKA 64

Query: 198 NDKAKVYILASISDVLAKKHESMVTAREII 228
           NDKAK+YILA+IS+VLAKKH+SMVTAREI+
Sbjct: 65  NDKAKIYILATISNVLAKKHKSMVTAREIM 94

[Close]
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match: A0A5D3CWI5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00300 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-29
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 133 MFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYD 192
           M + ++ LLA EKLNG+NY   K N NTILVVDDLRF+LTEECPQ PT NA R SW+AYD
Sbjct: 1   MNSLIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQTPTSNANRTSWEAYD 60

Query: 193 TWIKANDKAKVYILASISDVLAKKHESMVTAREII 228
            W+KAN+KA+VYIL S+SDVL KKHES+ T +EI+
Sbjct: 61  RWVKANEKARVYILVSMSDVLTKKHESLATPKEIM 95

[Close]
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match: A0A5A7T0E9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00680 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-29
Identity = 67/95 (70.53%), Postives = 79/95 (83.16%), Query Frame = 0 

Query: 133 MFTSVIALLAVEKLNGENYTQLKMNFNTILVVDDLRFILTEECPQAPTLNAARASWDAYD 192
           M +S++ LLA +KLNG+NY   K N NTILVVDDLRFILTEECPQ PT NA RAS +AYD
Sbjct: 1   MNSSIVQLLASKKLNGDNYATWKSNLNTILVVDDLRFILTEECPQTPTSNANRASREAYD 60

Query: 193 TWIKANDKAKVYILASISDVLAKKHESMVTAREII 228
            WIKAN+KA+VYILAS+SDVLAKKHE + T +EI+
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHECLATTKEIV 95

The following BLAST results are available for this feature:
BLAST of Moc05g25420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157449.15.1e-3484.95uncharacterized protein LOC111024145 [Momordica charantia][more]
XP_022158202.12.8e-3280.00uncharacterized protein LOC111024739 [Momordica charantia][more]
XP_022156751.11.4e-3181.11uncharacterized protein LOC111023591 [Momordica charantia][more]
XP_038881660.12.2e-2970.53uncharacterized protein LOC120073110 [Benincasa hispida][more]
XP_038889295.12.9e-2970.53uncharacterized protein LOC120079204 [Benincasa hispida][more]
BLAST of Moc05g25420 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWI42.5e-3484.95uncharacterized protein LOC111024145 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DWL41.3e-3280.00uncharacterized protein LOC111024739 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DVX86.7e-3281.11uncharacterized protein LOC111023591 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5D3CWI54.1e-2967.37Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00300... [more]
A0A5A7T0E95.3e-2970.53Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G0068... [more]
BLAST of Moc05g25420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 5..71
NoneNo IPR availablePANTHERPTHR24559:SF373REVERSE TRANSCRIPTASE DOMAIN, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATEDcoord: 5..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g25420.1Moc05g25420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding