Moc05g25300 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g25300
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr5: 17956539 .. 17958406 (-)
RNA-Seq ExpressionMoc05g25300
SyntenyMoc05g25300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGTTCGTCTAGTGACTCATCAGTTGGGTCGACCAGCTCTTCAAGCTCGAATTGTACTTCGGGGAACCAAAACCTAGCTTCCACCTCAGGAGACCCCACTGCTGGTCTGGCAGCCAAGCTTCCTCCCTCGACTTGCTCGGTAAGTAGATTGGCCGAGCTTCGTAAGACTTACCTCATCCCTGATTCCGTAAAGCTTAGGGTACCCAACATCGACGAATACCTCGAGGACCCCCCTCCGGGCTTCATTAGCTTCTACCCCCAGATGTTTAGTAGGGGGTTAGGCTTCCACTTCATCCCTTCATTTAGAGGTTCCTTAGTGCGGTCAACCTCGCCCCAGCTCAGCTCTCTCCCAACGGGTGGTCTACTATGCTCAGAGCTTACGTTCTGTGGTGAACCATCTAGGATGAGGACGAAGATAGATTAAGGGTGGACCAGCTCTTAGCAACCCACACAGTCAAGGTCTCCAACGAGGGAGAGGGTCGGTATTACCTCTCTACTCGGCGAAACGTAGGTCAGCTTATTAGGAACCCCTATTCTAACAAAAATTGGAAGGAATGTTGGTTCCTCGTCTCCGGCGATTGGCTCGTGAGGAACGAAGAGGGTGAGCTGATCTGCCATGTCCCAGTAGAGTTCGGAGACGTAGGTGGGTGTCCTAGGTACGAGCTAGGTTTTTTTTTCTTCTTCTTTTTAATTTCGTGCCTTTGTTTCTGACGATGCTTCATGATGCAGCTCTGTCATCCCCCATTCCGAGGATCAGCAACAAATCGTGGGAGATCGTCAAGCGTGTTCAAAGTCGGAGTCTGAAGTACGTACTATGGGGTAAGGCTCTCGTTTCGAACTCCCACCTCTTCTCTTGCGGTCTCAGCCCTCACGACCAACCAGACGAGTTCAACAAGCTACCAAAACCTCGGCAGCACAAATCAGGAAAGCACAAAACCTCAGAAGATAACCTCACCTCGGCACTTTAGCCCGTTTATCTGTAATCTTTTAACTAACCTCGTCTTCTTTTCAGAAATGGCCTTCAAGTTCCTCACACTCAACAGCACAAAGCGGCAGTGTGCCTCTACCTCGATTGCCCCACCCGCCCCCCCTCAAGCTCGTTGCCGCACGAGCATTGCTGACATCCCGGCCCCCGAGCTGGCTAACTTGGCCAAGCTCCAGGCCCTCCAAGCTCAGCCCCTGCAGACTGTAGCAGGGGGCGAGGGGTCGGCTATCCCTTTGAAGCGGAAGAAGCGAGCAAGGGATGTGCTCCAATCTGAGGAGGTTACCTCTAGATCTTCACCTCCCCCCATCGTGGTCGACTCAGAAGAAGGGTCTCAGCATGGTCAGTGGTGGTACGACGAGGTCCGACTTTCATTCAAGCTTGCCTTCTCCCATTCGAATATTCACGACCTCAAGACAAAGGTGAGGTCCTCAAGCTCCCGCTGGGTGGAGCGATCTGTCAAGGCGTCTAAGAACCCCGCGGAGGCGGTGAGGAGAACCATGGTTCTTGCTGTAGAGGTAGCTTCGGCACATTTCTTCTTCTTCTTCTCTCTTTTTTTTCTTTTTTTTTTAAACGTCAAACCCTTGTAGCTGCATTATCATGCCAACCTATCGGTATCAATGATGGGTTCTGGGCTCGAGGGTCGGGATCTGAAAGAGGAGGAGACTCGCACTTCATACGAGCGGCAGATTTATGAGCTTGAAGCTGAGGTTGACCAAGCTCGAGTTGAGAAGGAGGTGGACATTAACAGGTCCAAGGCTCCGATCGCCCAAGCCCGCGTCGACCTGCAAAACGCCAGGGGCCGAGCCGAGACGCGGAGAGAGGCTGGAAGGAAGCCCAGCAGAAGTTGGCAAGCTGGGTTTACTTGGAGAAAAGAGTGA

mRNA sequence

ATGAGTAGTTCGTCTAGTGACTCATCAGTTGGGTCGACCAGCTCTTCAAGCTCGAATTGTACTTCGGGGAACCAAAACCTAGCTTCCACCTCAGGAGACCCCACTGCTGGTCTGGCAGCCAAGCTTCCTCCCTCGACTTGCTCGGTAAGTAGATTGGCCGAGCTTCGTAAGACTTACCTCATCCCTGATTCCGTAAAGCTTAGGGATGAGGACGAAGATAGATTAAGGGTGGACCAGCTCTTAGCAACCCACACAGTCAAGGTCTCCAACGAGGGAGAGGGTCGGTATTACCTCTCTACTCGGCGAAACGTAGGTCAGCTTATTAGGAACCCCTATTCTAACAAAAATTGGAAGGAATGTTGGTTCCTCGTCTCCGGCGATTGGCTCGTGAGGAACGAAGAGGGTGAGCTGATCTGCCATGTCCCAGTAGAGTTCGGAGACGTAGGTGGGTGTCCTAGCTCTGTCATCCCCCATTCCGAGGATCAGCAACAAATCGTGGGAGATCGTCAAGCGTGTTCAAAGTCGGAGTCTGAAGTACAAATGGCCTTCAAGTTCCTCACACTCAACAGCACAAAGCGGCAGTGTGCCTCTACCTCGATTGCCCCACCCGCCCCCCCTCAAGCTCGTTGCCGCACGAGCATTGCTGACATCCCGGCCCCCGAGCTGGCTAACTTGGCCAAGCTCCAGGCCCTCCAAGCTCAGCCCCTGCAGACTGTAGCAGGGGGCGAGGGGTCGGCTATCCCTTTGAAGCGGAAGAAGCGAGCAAGGGATGTGCTCCAATCTGAGGAGGTTACCTCTAGATCTTCACCTCCCCCCATCGTGGTCGACTCAGAAGAAGGGTCTCAGCATGGTCAGTGGTGGTACGACGAGGTCCGACTTTCATTCAAGCTTGCCTTCTCCCATTCGAATATTCACGACCTCAAGACAAAGGTGAGGTCCTCAAGCTCCCGCTGGGTGGAGCGATCTGTCAAGGCGTCTAAGAACCCCGCGGAGGCGGTGAGGAGAACCATGGTTCTTGCTGTAGAGCTGCATTATCATGCCAACCTATCGGTATCAATGATGGGTTCTGGGCTCGAGGGTCGGGATCTGAAAGAGGAGGAGACTCGCACTTCATACGAGCGGCAGATTTATGAGCTTGAAGCTGAGGTTGACCAAGCTCGAGTTGAGAAGGAGGTGGACATTAACAGGTCCAAGGCTCCGATCGCCCAAGCCCGCGTCGACCTGCAAAACGCCAGGGGCCGAGCCGAGACGCGGAGAGAGGCTGGAAGGAAGCCCAGCAGAAGTTGGCAAGCTGGGTTTACTTGGAGAAAAGAGTGA

Coding sequence (CDS)

ATGAGTAGTTCGTCTAGTGACTCATCAGTTGGGTCGACCAGCTCTTCAAGCTCGAATTGTACTTCGGGGAACCAAAACCTAGCTTCCACCTCAGGAGACCCCACTGCTGGTCTGGCAGCCAAGCTTCCTCCCTCGACTTGCTCGGTAAGTAGATTGGCCGAGCTTCGTAAGACTTACCTCATCCCTGATTCCGTAAAGCTTAGGGATGAGGACGAAGATAGATTAAGGGTGGACCAGCTCTTAGCAACCCACACAGTCAAGGTCTCCAACGAGGGAGAGGGTCGGTATTACCTCTCTACTCGGCGAAACGTAGGTCAGCTTATTAGGAACCCCTATTCTAACAAAAATTGGAAGGAATGTTGGTTCCTCGTCTCCGGCGATTGGCTCGTGAGGAACGAAGAGGGTGAGCTGATCTGCCATGTCCCAGTAGAGTTCGGAGACGTAGGTGGGTGTCCTAGCTCTGTCATCCCCCATTCCGAGGATCAGCAACAAATCGTGGGAGATCGTCAAGCGTGTTCAAAGTCGGAGTCTGAAGTACAAATGGCCTTCAAGTTCCTCACACTCAACAGCACAAAGCGGCAGTGTGCCTCTACCTCGATTGCCCCACCCGCCCCCCCTCAAGCTCGTTGCCGCACGAGCATTGCTGACATCCCGGCCCCCGAGCTGGCTAACTTGGCCAAGCTCCAGGCCCTCCAAGCTCAGCCCCTGCAGACTGTAGCAGGGGGCGAGGGGTCGGCTATCCCTTTGAAGCGGAAGAAGCGAGCAAGGGATGTGCTCCAATCTGAGGAGGTTACCTCTAGATCTTCACCTCCCCCCATCGTGGTCGACTCAGAAGAAGGGTCTCAGCATGGTCAGTGGTGGTACGACGAGGTCCGACTTTCATTCAAGCTTGCCTTCTCCCATTCGAATATTCACGACCTCAAGACAAAGGTGAGGTCCTCAAGCTCCCGCTGGGTGGAGCGATCTGTCAAGGCGTCTAAGAACCCCGCGGAGGCGGTGAGGAGAACCATGGTTCTTGCTGTAGAGCTGCATTATCATGCCAACCTATCGGTATCAATGATGGGTTCTGGGCTCGAGGGTCGGGATCTGAAAGAGGAGGAGACTCGCACTTCATACGAGCGGCAGATTTATGAGCTTGAAGCTGAGGTTGACCAAGCTCGAGTTGAGAAGGAGGTGGACATTAACAGGTCCAAGGCTCCGATCGCCCAAGCCCGCGTCGACCTGCAAAACGCCAGGGGCCGAGCCGAGACGCGGAGAGAGGCTGGAAGGAAGCCCAGCAGAAGTTGGCAAGCTGGGTTTACTTGGAGAAAAGAGTGA

Protein sequence

MSSSSSDSSVGSTSSSSSNCTSGNQNLASTSGDPTAGLAAKLPPSTCSVSRLAELRKTYLIPDSVKLRDEDEDRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFLVSGDWLVRNEEGELICHVPVEFGDVGGCPSSVIPHSEDQQQIVGDRQACSKSESEVQMAFKFLTLNSTKRQCASTSIAPPAPPQARCRTSIADIPAPELANLAKLQALQAQPLQTVAGGEGSAIPLKRKKRARDVLQSEEVTSRSSPPPIVVDSEEGSQHGQWWYDEVRLSFKLAFSHSNIHDLKTKVRSSSSRWVERSVKASKNPAEAVRRTMVLAVELHYHANLSVSMMGSGLEGRDLKEEETRTSYERQIYELEAEVDQARVEKEVDINRSKAPIAQARVDLQNARGRAETRREAGRKPSRSWQAGFTWRKE
Homology
[Close]
BLAST of Moc05g25300 vs. NCBI nr
Match: XP_022158122.1 (uncharacterized protein LOC111024680 [Momordica charantia])

HSP 1 Score: 69.3 bits (168), Expect = 9.2e-08
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E + L VDQLLA    K   +  GR+Y+  R+  G +++ P S K W   WF 
Sbjct: 45  LRARDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. NCBI nr
Match: XP_022144034.1 (uncharacterized protein LOC111013826 [Momordica charantia])

HSP 1 Score: 69.3 bits (168), Expect = 9.2e-08
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E + L VDQLLA    K   +  GR+Y+  R+  G +++ P S K W   WF 
Sbjct: 45  LRARDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-07
Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 65  VKLRDEDEDRLR-VDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E  L  VDQLLA    K   +  GR+Y+  R+  G +++ P S K W   WF 
Sbjct: 138 LRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFY 197

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 198 ASGEWLAKDESGRSFFDVPTRFGNL 222

[Close]
BLAST of Moc05g25300 vs. NCBI nr
Match: XP_022155229.1 (uncharacterized protein LOC111022371 [Momordica charantia])

HSP 1 Score: 67.4 bits (163), Expect = 3.5e-07
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           +++RD +E + L VDQLLA    K   +  GR+Y+  R+    +++ P S K W   WF 
Sbjct: 45  LRVRDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGAXGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. NCBI nr
Match: XP_022158650.1 (uncharacterized protein LOC111025108 [Momordica charantia])

HSP 1 Score: 66.6 bits (161), Expect = 6.0e-07
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E + L VDQLLA    K   +  GR+Y+  R+    +++ P S K W   WF 
Sbjct: 45  LRARDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGADGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-08
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E + L VDQLLA    K   +  GR+Y+  R+  G +++ P S K W   WF 
Sbjct: 45  LRARDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match: A0A6J1DWD2 (uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024680 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-08
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E + L VDQLLA    K   +  GR+Y+  R+  G +++ P S K W   WF 
Sbjct: 45  LRARDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.8e-08
Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 65  VKLRDEDEDRLR-VDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E  L  VDQLLA    K   +  GR+Y+  R+  G +++ P S K W   WF 
Sbjct: 138 LRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFY 197

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 198 ASGEWLAKDESGRSFFDVPTRFGNL 222

[Close]
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match: A0A6J1DPM7 (uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022371 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-07
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           +++RD +E + L VDQLLA    K   +  GR+Y+  R+    +++ P S K W   WF 
Sbjct: 45  LRVRDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGAXGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

[Close]
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match: A0A6J1DWF1 (uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025108 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-07
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 65  VKLRDEDE-DRLRVDQLLATHTVKVSNEGEGRYYLSTRRNVGQLIRNPYSNKNWKECWFL 124
           ++ RD +E + L VDQLLA    K   +  GR+Y+  R+    +++ P S K W   WF 
Sbjct: 45  LRARDSEEAELLDVDQLLACFEAKRIAKKPGRFYMCARKGADGIVKGPTSIKGWVRKWFY 104

Query: 125 VSGDWLVRNEEGELICHVPVEFGDV 149
            SG+WL ++E G     VP  FG++
Sbjct: 105 ASGEWLAKDESGRSFFDVPTRFGNL 129

The following BLAST results are available for this feature:
BLAST of Moc05g25300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158122.19.2e-0837.65uncharacterized protein LOC111024680 [Momordica charantia][more]
XP_022144034.19.2e-0837.65uncharacterized protein LOC111013826 [Momordica charantia][more]
XP_022159063.11.2e-0737.65uncharacterized protein LOC111025502, partial [Momordica charantia][more]
XP_022155229.13.5e-0736.47uncharacterized protein LOC111022371 [Momordica charantia][more]
XP_022158650.16.0e-0736.47uncharacterized protein LOC111025108 [Momordica charantia][more]
BLAST of Moc05g25300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CR424.5e-0837.65uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DWD24.5e-0837.65uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DXS55.8e-0837.65uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DPM71.7e-0736.47uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DWF12.9e-0736.47uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc05g25300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 369..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..425

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g25300.1Moc05g25300.1mRNA