Moc05g24970 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g24970
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotran_gag_3 domain-containing protein
Location	chr5: 17786325 .. 17789770 (+)
RNA-Seq Expression	Moc05g24970
Synteny	Moc05g24970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAATTTGATTTCTATCCGGCTTGATTCCACGAATTTTGTTCTGTGGAAATTCCAACTCACGACAATTTTGAAAACCCACAAACTGTTTGGTTTTATCGATAGCTCCTCTGTACCCCTTGCGAAGACTCCAAATACTGCATATGAAGATTGGCTTGCTCGTGATCAGGTGCTCATGACATTGATCAACGCTACGCTTTCTCCCACTGCCATAGCGTATGTTGCTGGTAGCACTTCTTTGAAATAAATTTGGGAGATATTGGATAGGCATTATTCTTTTAGTTCTCAGACGAACATCATCAATGTCAAGTCTGATCTTCCGTCTATTTCCAAGAAGCCTGTCGAATCTGTTGATGATTATGTGAAGCGAATTAAGGAACTCAAAGACAAATTAGCAAATGTCTCTATTGTGATTGATACGGAGGATCTCCTTATCTACACACTCAATGACTACAATACCTTCCAAACCTCCATGAGAACTTGCTCTCAAACTGTTTCTTTCGATAAACTCCATGTTCTCATAAAATCTGAGGAAACTGCATAGGAGAAGCAAATTAGGCGGGATGATGTCTTGATTCAAACTACTGCTCTTTTAGCCTGCAGAGTTCTTCTCCACATCGAGGTACTAATTCAATTTCGAATTTTTCTCGCGGGAAGGGCCATCAAAGCCGTGGTAGATTTTCTAATCCATCCAGCCGTGGTAATTTTCGTGGCAATACCTCTCAAAGCCGTGGTGGTCGTAATTCCTTTGGTTTCCTACAGACTGATAATCGTATTCCCTGCCAAATTTATGGCTGATTAGGGCATTCATCTCTCATTGTTTCAATCGAATGAATTATAATTTTTAGGGATGACGTCCATCAGTGCAACTTGCTGCTATGGTTGTTTCACAGAACTTTACTATTATTCATCCCACGACTAATTTTAGCAATCTACAATTTGCTGCTAATTTTGGTAATCATTAGCATGCTGCTCCTCCTATGCCATCGTTACGGCTTGCAGATTCAGGATGTAACACACACACAAAATCAGCTTTATCAAACTTATCTGTAGCATCTGAATATAATGAGGAAGATCAGGTCTCTATTGGCAGTGGTCAAGCTCTTCCAATATCTCATACAGGTTACGAATCCTTTCTACTCCTTCTTCTTCCTTTACTCTGTCTAAATTACTTCAAGTTCCTTCTATTTCGTCAAATCTTTTGTCTGTTCATCAACTCTGCATGGACAATAATTACATTGTTATTTTAGATTCTGATCATTTTATTGCTTAGGACAAATCTACGGGCCAAATTTTGTTCAAAGTTCCTAGTACCAATGGATTATATCCGTTCACTCCTCTAGCTGATCAATCGTTGTTAAAATCAGCCTCTTCTGTTCTTGCTTGCCATGCTACTCATGTTGGTACACACTCGACTTATTCAATTTGGCATAATCGGTTAGACCATGCTAGCCTCTCTGTTCTTAATTCCGTTTTCCAACAGCTTCATATACCTTCTGTTTCCTCTGAATATTATGTTTGTGAGTATTTGTTTGTATGGGAAAATGAAGAAACTCCCATTTTCTGTTTCTAGTTCTATTTCAACTTCACCTTTAGAACTTGTGCATACTGATGTATGGGGTCATGCCCCTGAAATTTCTGTTAATGGCTACCACTACTACTTAATTAGATATACATAGCTCTATCCTCTTGTACATAAATCTAATGTTTCTGCTATTTTTCAAAGATTTAAGCCTTTAGTTGAAAATTTATTCTCTACTCGTATTAAAACTCTTTGTAGTGATGGTGGTGGTGAATTTGTCAATCATTCCATTCGTTCCTTTATTGACATTCACGATATACTACATCAAAAATCATGTGCATATACTCCCGAACAAAACGTCATTTCCGAACAAAAACATCGCCATATTGTCGAAATGGCCATTACTCTTATGACTCGTGTTTTTGTTCCTATTCGTTTTTGGTCCTTTGCCTTTTCAACTGCTGTTTTCTTTATCAATAGATGACTCTCTCCATTGCTCAACAACAAATCCCCTTTCGAATGTCTTTTCATCTGTCTTCCTAATTACACCCACCTTAAAACTTTTAATTGTGCTTGTTATCCTGTTCTAAAACCCTATAATTCTCACAAACTTCAACCTAGAACATCTCAGTGTGTCTTTCTCGGTCATCCTCTTGAATGTAAGGGTTATTTGTGCTTCAACATGAGTACTGGCAAATTTTATACTTCTATACATGTTGTTTTTTACGAGACTTTCTTTCCATTTTCTTCCACCACTTCTTCTTCCTCTGTTTCTCATGTTTCTTCCAATTCTTCTTCTCCTTCTTCGTTGCCTCTAATTCTTTCTTTGTTTTCTCTTTCTTCGTTTCCTTCTACTTGTGCAATTGCCACATATTCTTTTTCTTCTACCAATAACTCAAATGATACTAATCCTATTTCTGATGTTCCTTATGTTTCATATGAATCTGCCCATGGTGCTAGTTCTTCTAATGTTTCTGGCTGATTCTAATGTTGTTCATGGTACCAATATTTCTGATGTACCGAATGTTACTGAGGTTACTGATTCTAGTGCTATTATTACTCCAAATGCTTCTTTACCGGTTGCTCCTTCTTCCTCTAATGTTCATCCCATGCGAACAAGAGCCAAATCTGGTATTTCTAAAAAAAAGGTTTTTGTTGCCACTATTGCCCCTACTTCTGAATCTGAACCTTCTTCATTTTCTAAGGTGTCTTTGATTCCGGTTTGGCAACAAGCTATGGTTGAAGAGTTTGATGCCTTAGTTAAACAACGTACTTGGGAGCTTACCCTTTTGCCTCTTGGCAAGAGTGCCATTGGTTGTAAATGGGTATATCGGGTTAAACGTCATTTAGATGGTTCTATTGCCCGAAATAAGGCCCGCCTTGTTGCTAAAAGGTATCACCAACAAGAAGGTATTGACTATGAAGAAACCTTCAGTCCAGTTATTAAGAAACCCACTATTCGTATTATATTATCTTTGGTAGCACAATTTAGGTGGTCTCTACGACAATTGGATCTTAAAAACACATTCCTTCATGGTGATCTTGGCGAAGAGGTGTATATGCAACAACCCCAAGGTTTTATTCATCCATCCTTTTGATAAGTCTTGAATTTTAGGAAAAAGTATTTACAAATTGTGCATGTTTAGTGTCTTCTGAAATTAAATACGTGTGTTTCATGCATTGAATCTGGTATAAATGGGACTATTTCTTAGGAAAGACTTGTACACTTGGTTTTGGATAAATAGATAGAATTATGAGGAAATATATATGTTTTATAGGGGAAAAAGGAAGGAAAAAGCAGCAATGCACCTGTTGCATATGACACAGAGGCTATCTTAAAGCTAGCAGCGATGCGTCTGGCACATCGCCAACACTCTAGAAACTTCAGCAATGCACCTGACGCATTCTCCACCTACAAATAA

mRNA sequence

ATGTGCAATTTGATTTCTATCCGGCTTGATTCCACGAATTTTGTTCTGTGGAAATTCCAACTCACGACAATTTTGAAAACCCACAAACTGTTTGGTTTTATCGATAGCTCCTCTGTACCCCTTGCGAAGACTCCAAATACTGCATATGAAGATTGGCTTGCTCGTGATCAGGTGCTCATGACATTGATCAACGCTACGCTTTCTCCCACTGCCATAGCTTCTCAGACGAACATCATCAATGTCAAGTCTGATCTTCCGTCTATTTCCAAGAAGCCTGTCGAATCTGTTGATGATTATGTGAAGCGAATTAAGGAACTCAAAGACAAATTAGCAAATGTCTCTATTGTGATTGATACGGAGGATCTCCTTATCTACACACTCAATGACTACAATACCTTCCAAACCTCCATGAGAACTTGCTCTCAAACTGTTTCTTTCGATAAACTCCATCATGCTGCTCCTCCTATGCCATCGTTACGGCTTGCAGATTCAGGATGTAACACACACACAAAATCAGCTTTATCAAACTTATCTGTAGCATCTGAATATAATGAGGAAGATCAGGACAAATCTACGGGCCAAATTTTGTTCAAAGTTCCTAGTACCAATGGATTATATCCGTTCACTCCTCTAGCTGATCAATCGTTGTTAAAATCAGCCTCTTCTGTTCTTGCTTGCCATGCTACTCATGTTGGTACACACTCGACTTATTCAATTTGGCATAATCGGTTAGACCATGCTAGCCTCTCTGTTCTTAATTCCGTTTTCCAACAGCTTCATATACCTTCTGTTTCCTCTGAATATTATGTTTTTCTTCTAATGTTTCTGGCTGATTCTAATGTTGTTCATGGTACCAATATTTCTGATGTACCGAATGTTACTGAGGTTACTGATTCTAGTGCTATTATTACTCCAAATGCTTCTTTACCGGTTGCTCCTTCTTCCTCTAATGTTCATCCCATGCGAACAAGAGCCAAATCTGGTATTTCTAAAAAAAAGGGGAAAAAGGAAGGAAAAAGCAGCAATGCACCTGTTGCATATGACACAGAGGCTATCTTAAAGCTAGCAGCGATGCGTCTGGCACATCGCCAACACTCTAGAAACTTCAGCAATGCACCTGACGCATTCTCCACCTACAAATAA

Coding sequence (CDS)

ATGTGCAATTTGATTTCTATCCGGCTTGATTCCACGAATTTTGTTCTGTGGAAATTCCAACTCACGACAATTTTGAAAACCCACAAACTGTTTGGTTTTATCGATAGCTCCTCTGTACCCCTTGCGAAGACTCCAAATACTGCATATGAAGATTGGCTTGCTCGTGATCAGGTGCTCATGACATTGATCAACGCTACGCTTTCTCCCACTGCCATAGCTTCTCAGACGAACATCATCAATGTCAAGTCTGATCTTCCGTCTATTTCCAAGAAGCCTGTCGAATCTGTTGATGATTATGTGAAGCGAATTAAGGAACTCAAAGACAAATTAGCAAATGTCTCTATTGTGATTGATACGGAGGATCTCCTTATCTACACACTCAATGACTACAATACCTTCCAAACCTCCATGAGAACTTGCTCTCAAACTGTTTCTTTCGATAAACTCCATCATGCTGCTCCTCCTATGCCATCGTTACGGCTTGCAGATTCAGGATGTAACACACACACAAAATCAGCTTTATCAAACTTATCTGTAGCATCTGAATATAATGAGGAAGATCAGGACAAATCTACGGGCCAAATTTTGTTCAAAGTTCCTAGTACCAATGGATTATATCCGTTCACTCCTCTAGCTGATCAATCGTTGTTAAAATCAGCCTCTTCTGTTCTTGCTTGCCATGCTACTCATGTTGGTACACACTCGACTTATTCAATTTGGCATAATCGGTTAGACCATGCTAGCCTCTCTGTTCTTAATTCCGTTTTCCAACAGCTTCATATACCTTCTGTTTCCTCTGAATATTATGTTTTTCTTCTAATGTTTCTGGCTGATTCTAATGTTGTTCATGGTACCAATATTTCTGATGTACCGAATGTTACTGAGGTTACTGATTCTAGTGCTATTATTACTCCAAATGCTTCTTTACCGGTTGCTCCTTCTTCCTCTAATGTTCATCCCATGCGAACAAGAGCCAAATCTGGTATTTCTAAAAAAAAGGGGAAAAAGGAAGGAAAAAGCAGCAATGCACCTGTTGCATATGACACAGAGGCTATCTTAAAGCTAGCAGCGATGCGTCTGGCACATCGCCAACACTCTAGAAACTTCAGCAATGCACCTGACGCATTCTCCACCTACAAATAA

Protein sequence

MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFIDSSSVPLAKTPNTAYEDWLARDQVLMTLINATLSPTAIASQTNIINVKSDLPSISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTLNDYNTFQTSMRTCSQTVSFDKLHHAAPPMPSLRLADSGCNTHTKSALSNLSVASEYNEEDQDKSTGQILFKVPSTNGLYPFTPLADQSLLKSASSVLACHATHVGTHSTYSIWHNRLDHASLSVLNSVFQQLHIPSVSSEYYVFLLMFLADSNVVHGTNISDVPNVTEVTDSSAIITPNASLPVAPSSSNVHPMRTRAKSGISKKKGKKEGKSSNAPVAYDTEAILKLAAMRLAHRQHSRNFSNAPDAFSTYK

Homology

[Close]

BLAST of Moc05g24970 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-42
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-42
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-42
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-42
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.3 bits (464), Expect = 3.8e-42
Identity = 101/177 (57.06%), Postives = 129/177 (72.88%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFIDSSS-VPLAKTPNTAYEDWLARDQVL 60
           +CNLISI+LDSTN+VLWKFQLTT+LK HKLFGFID +   P++   N +Y+DW A+DQ L
Sbjct: 26  ICNLISIKLDSTNYVLWKFQLTTLLKAHKLFGFIDGTQPCPIS---NPSYDDWFAKDQAL 85

Query: 61  MTLINATLSPTAIA----------------------SQTNIINVKSDLPSISKKPVESVD 120
           MT+INATLSP A+A                      S++N++N+KSDL +ISKK  ES+D
Sbjct: 86  MTVINATLSPEALAYVVGSTTSKQVWNVLAKLYSSSSRSNVVNLKSDLQTISKKSDESID 145

Query: 121 DYVKRIKELKDKLANVSIVIDTEDLLIYTLN----DYNTFQTSMRTCSQTVSFDKLH 151
            Y+KRIKE+KDKLANVS V++ EDLLIY LN    +YNTF+TSMRT S  V+F++LH
Sbjct: 146 AYIKRIKEIKDKLANVSTVVNDEDLLIYALNGLPTEYNTFRTSMRTRSTPVTFEELH 199

[Close]

BLAST of Moc05g24970 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.3e-43
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.3e-43
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.3e-43
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.3e-43
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID------------SSSVPLAKTPNTA 60
           +CNLIS+RLDSTNFVLWKFQLT ILK HKL+GFID            SS+  +    N +
Sbjct: 26  ICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCPPRTNNSSSTSTVPPQSNPS 85

Query: 61  YEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVKSDLP 120
           YEDW+A+DQ LMT+INATLSP A+A                      S++N++N+KSDL 
Sbjct: 86  YEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQ 145

Query: 121 SISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTL----NDYNTFQTSMRTCSQ 151
           +I KKP ES+D Y+KRIKE+KDKLANVS  I+ EDLLIY L    N+YNTF+TSMRT SQ
Sbjct: 146 TIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQ 205

[Close]

BLAST of Moc05g24970 vs. ExPASy TrEMBL
Match: A0A6J1E049 (uncharacterized protein LOC111025150 OS=Momordica charantia OX=3673 GN=LOC111025150 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.7e-41
Identity = 102/192 (53.12%), Postives = 129/192 (67.19%), Query Frame = 0


Query: 1   MCNLISIRLDSTNFVLWKFQLTTILKTHKLFGFID----------------SSSVPLAKT 60
           +CNL+S+RLDS+NFVLWKFQLT ILK HKL+GFID                SSS P A  
Sbjct: 21  ICNLVSLRLDSSNFVLWKFQLTAILKAHKLYGFIDGSTPKPAEFLVSXXDXSSSXPPAAN 80

Query: 61  PNTAYEDWLARDQVLMTLINATLSPTAIA----------------------SQTNIINVK 120
           P  A+ +W+A+D  LMTL+NA LS +A+A                      S+TN++N+K
Sbjct: 81  P--AFSEWIAKDHALMTLLNAXLSSSALAYVVGCDSSQQVWQTLVKHYSSSSRTNVVNLK 140

Query: 121 SDLPSISKKPVESVDDYVKRIKELKDKLANVSIVIDTEDLLIYTLN----DYNTFQTSMR 151
           SDL SISKKP  S+D YV+RIKELKDKLANV +++D EDLLIYTLN    ++N F+TSMR
Sbjct: 141 SDLQSISKKPGXSIDXYVQRIKELKDKLANVXVLVDNEDLLIYTLNXLPPEFNXFRTSMR 200

The following BLAST results are available for this feature:

BLAST of Moc05g24970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448007.1	1.7e-42	55.32	PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]	[more]
XP_008448008.1	1.7e-42	55.32	PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]	[more]
KAA0049700.1	1.7e-42	55.32	T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa]	[more]
XP_016900446.1	1.7e-42	55.32	PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]	[more]
KAG6588985.1	3.8e-42	57.06	Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr...	[more]

BLAST of Moc05g24970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g24970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLI6	8.3e-43	55.32	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	8.3e-43	55.32	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	8.3e-43	55.32	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	8.3e-43	55.32	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1E049	7.7e-41	53.13	uncharacterized protein LOC111025150 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc05g24970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 380..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..343
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 1..153
None	No IPR available	PANTHER	PTHR47481:SF3	GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 1..153
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 3..37 e-value: 1.4E-6 score: 28.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g24970.1	Moc05g24970.1	mRNA