Moc05g24770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g24770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	50S ribosomal protein L25
Location	chr5: 17619214 .. 17624053 (+)
RNA-Seq Expression	Moc05g24770
Synteny	Moc05g24770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACGCTTCTACCACTCTCCCACTCTCACAAGAGTCCTCCTACTCCGCCGGTTTTCGTCGGCCGCCACCGCCGCCGTCCTCGATTCAGATCCCGAACCTCCATTTTCGTACTTGGAGGATCTTCCAAGACCCGATCCCAAGTACGCCGAGACAATCCTCGCCGTTCCTCGCTCCATCTCCGGCAAGAACATTTCCGCCAAAGAGCGCAAGGCTGGCCGTACTCCAAGCATTGTGTTCGAGCAAGAGGATGGCCAGCATGGCGGAAATAAGCGTCTCATATCAGTTCCCACCAATCAGATTAGGAAGCTTGTAAATCATCTCGGTCGCTCCTTCTTCCTTTCCAGGCTTTTCGATCTTGAAGTTCGCCCCGAGTTTGAGTCCGGGGAGATTATCGAGAAGGTTCGGGTTTTACCTCGGAAGGTAGTGTATGCTATGATCGAACTCGGCTGGTTAATTTCATTTTAGGAAATTATATGAAAATTCCACCTTAGTGAGTTTGGGAAATGACTTATGAGTAAGATTAGAATAATGCTGATTGTTTCATGGGTGGAAGTACTGAAATGAAGGGAGAAAGATTATGTTTTGTACTTTTGAATTCAAATGTTTTCACCATAAAAAATTTCATATGCTTAGTGCAACCGAGTTACTTGGCGTGTATGAAGAATATTAGAGCAATGTATCTTTTAATTTTACGATTGCTCCCATCATGATCATTATATTTCATCTATTTGTTTGTGTTCTATATTCAGAATACAAAAATGGTAATTTTAGTTTAGTTTTGATTATAAATCAGTGTGAGATTTTGTGAGAATGTATATGTGAGTTAGATAATACCTCTTCTGAACTAGAACCGTTCATGTTTGTTCAGATTCATCTCCATGCGGGAACTGATGCACCTCTTAATGTTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTGATGTGCCTCTTATGTTCAGAGGAGAGGATGTATGTCCAGGATTGCGGAAAGGTACTACTACAACACTAAGTTTATTCTATTTGATTTTCTTTTGAGAGTAGAGTACAAATGTTGTGCAGTAATAAATGGGCTAAATTTAAGCGATTTGTTGATGACTGCCACAATGACACTCTTAGGACTTAGTATGGACTTCCAAATGCAATCATTTCTTTGATTTTTTAAACTGAGAAACGGACCCGCTCACTGATGGCATGAAAAGCACAATAGGGGATGAAACACCTAGGTCACCTAGTACAAGAGCCTAAAACATTGTTGCTAGCGGAATTGATTACAAAGATAAATAATTACAAAAAGGTTTACATTTAACCAAAGAGGATAGCTGGGTGCTACAAAATTTCCAAAATCTAAAAATACTAGATGGCTGCTTCTTCCTTCCTCATTGTCGATGCCCATAGAAAATCTATAATCTTCTTTCCCGTCTCTTTAGCGATCTTCAAAGATATTTCATTGGCAAGTTTGAAATAAGGGAGGAAAAAGAACCCCCTTAGTCATACAGCTTATATATGCGCTCTGCATTTGGGGAATGAAAGACAGTAACTACAAAAAGGGATTAGAATTGATATCCAAGTGGAGGCTACAAAAGGAAAAACTCCCTTTTCTTTGGGGGACATGCTTATGTTATTAGTATTCCACTTTACTATTTTTCCATTCTTAAAGCTCCGGTGGGGGTTGTAAGGGATATAGAAAAGATTACAAGAAATTTCCTATGGAATGGTAATACTCAGAAGGGTAATTACATCCACCTGGTTAATTGGGGGAAAACGTCACTCCCTATACAGTACGGGGGTCTTGGAATTGGAGGACTTCAACAAAAAAACAATAGTCTTCTTCTTAAGTGGTTGTGGAGGTTTTCACAGGAGACAAATGCTCTTTGGAGGAGGGTGATAGCCAGCATCTACGGTGAGTCCGCTCACAGGTGGTCTACTATTCCCCCAAAAGGGAAAGCTCAAGGGAGACTGTGGTTTGATATTGCGAAGAATAGCACGTTCTTTCACAGGTTTTTGAATTTCAAAGCTAAAAACGGGGAGAGAATTAGTTTTTGGAATGATAAATGGATTGATGACAGCACCCTTTGAGACTCTTTTCCACTCATTTTTAATATATCCATGAAAAAGAAGGCCCCAATTGCTGATTGTTGGAGGGAGGAGGAGCAAAGATTGGGACTTAGGTCTATGCAGAGGGCTCTTTGACTGGGAGATTGATAGCTGGTTGGACCTTATTCAAAGGTTGGAAGCCGTTCAGATAAGAGAAGGGGAAGATAAGGCTCTATGGATGCTGGAAAAAGAGCAAAATTTTACCACCAGATCAGCCTTTTTTTGAAATTAACAGAATGCACTCCCTTGCTGAAGGTCCCCCTCATCAATTCCATCTGGAAGTTCAAAATTCCAAAGAAAATTAAGGTTTTTCTTTGGTCAATGGCTTACAGAAGCTTAAATACTCACGAGATCATCCAAAAGAAAAACACAAGCTGGGCACTCTGACTCTCCCCTTCGGTGTGTAGTCTTTGCCTTTGTGGGGAGGAGACCATTGACCACCTTTTCATTCACTGTACCTTTGCAACAAGATGTTGGTCTTTTATTCTGGATTCTTTTGGCATTTCCCTATGATTTCCTCAGCAGATTGATGGGTGGCTTCCTGAATTGCTAACGGGATGGTTTCTTCCCAAAAAAGCAAGGGTAATTTGGAATTGCGCTACAAGGGCTCTTCTTTGGCATTTATGGGGAGAGCGAAATCGTCGTATATTTGAAGATATGAACTCTACTTTTGAATCTTTTTGTAGTGGTGTTCAACACACTACTTCTTGGTGGTGCCTTAACTATAGCAATTTTTTTTGTAATTACAATCTTTCCACCTTCTTACACAATTGGAAAGCTTTTGTATAGCTTCTCTGGGTGGGGTTGACTCTACCCCAGCCCTTAGGCTGTTTCTCTTTTGAGTTTTTCTAATCTAAGGTTTCTTATCAAAAAAAAGTTATTGCTATTCTCTCAAGTCTCTACCTACTTTCTTTTGATCTCTGGAATATCTTGTAGTATAGCCAAGATGATCGAGAGGATGTTCTAAGAATTATTCTAGTTGGGTTGAGTAAAACGTGAAAGGACAGGAGCTTTCAACATGAGGTTCTGTGGCATGGGATTGTGTTGCACTCATTCCAATGCAATTATTCTAGTTGCAAAAGCTTCTGGAAGACTATTTCTAGGGTAAGGAACTTGGTAGATGATGGTTGAGGGGTATTAGTTTGTGGTTGGAAACAATTTTTTTTTTATTATAATCGGGAGTCAGAGCTTTGTTGTCCTATACCCAATGGCATCCGTGCCCTCCCTAGGGCCCGGACCCGGGATACATCAAGGATTTATGGTATTAAACTCGCATGAAGGTTCGAACTTGAAACCTCTAAAGCTAGTATGACCAAGAGACCTCAAACCCTAACCAATTGGGCCATCTTGGGCTTGTGGTCGGAAACAATTGAATGTCGATTGTGGCAAGATCTGAGATGGGACTATCAACCTCTCTCTAATCTACCTTCTTTCCTGAATTTTTGCTTTATGCCATAGTGAGACCAGCCAATTGTGGATTGGTAGAATGTATCCTTATACTTTTGGTGTTTTAACTCCAGAGGAAACTTGAATGATGCAATGGTCAGTCGAATTGGTATTCTTTGATAACAATTGGTTTGTTTGATTAGATTGTTAAAATGTGGTTGCTTTGTAGGTGAAAGAAGAAAGATGACATGATATTTTTTTTTTCCTTAGTGGAAACAATTTCATTGATAAGATGAAATTAAATGACAAAGAGGGAGAGAACCCAATATGGGGGTTACAAAAATGCTCTCCAATTAGATAACAATGAAGCGAAACTATAATGATGAAAGAGAGGAGAGCATTTACACCAAAAAAAATAACCAAATAAACTATAGACTAAAAAATGTTGAGAAGAGATCACTCCTTGTCTTTAAAGATAGCATGATATGATGATTGTGTGTATAAAAAAATTATATATAATGGCTAACGTACCCCTCCCCACCCCCTTTTTTTTTTTTTTTTTTGTAGATATATTACTTTGTGGGTGGGTGGGGTTTACATCGAAGCTATACTTGATGATGTAGGATACTTGAATTTTCAAGTTAGATAGGGTATAGATCTAAATATGTTGACATCTGCCCCCAGTTACAGGGAAAAGGCTAAATAGCTTCGATTATGGGTTATTAAAAAAATGTTAACATCACCAGAAGCTAGCTGGTAGTAAATTGCAACCTCAGGTTTATTTTCTGATATATTAAGTTGAAATGATCTAGTATCTGTTTCCTTAACATAATTAGATCTTTTTGGAAAAAGAGATAAAATTGCTCCAGAAAAGAAAGCTTTGCTTGTATTTTTTCTGTTCCTTTTAGCTTTTACTTCTTCATTTGTACTTTTTGAAAAGTTCCTGGTTTCTCTAAAAATGTTCTGCATTCTCTAAAAAATACAGCTGTTGATCCTGAAATGTAGTCTTCAAACGACAGAACAATTATATGTATTTTTTTTAAATGTAGTCTACAAACGACAGAACAATTATAGTTTTACTCCTTTGATGATCATTGTTTTAAAAATTATTGGATAAATTGGACAGGATCTTATTTGAATACAATCAAGAAGACTGTTAAATACCTTTGTCCTGCCGATATCATTCCTCCATATATTGATGTCGATCTGAGTGAGTTAGATGTTGGCCAAAAGTTGGTTATGGGTGACCTCAAGGTTCATCCTGCATTAAAGCTTCTTCAATCGAAGGATGAGCCTGTATGTAAGATCGCAGGAGCCAGAGTTTCTGACCAGCAAAGGAAATCAAAATAA

mRNA sequence

ATGTTACGCTTCTACCACTCTCCCACTCTCACAAGAGTCCTCCTACTCCGCCGGTTTTCGTCGGCCGCCACCGCCGCCGTCCTCGATTCAGATCCCGAACCTCCATTTTCGTACTTGGAGGATCTTCCAAGACCCGATCCCAAGTACGCCGAGACAATCCTCGCCGTTCCTCGCTCCATCTCCGGCAAGAACATTTCCGCCAAAGAGCGCAAGGCTGGCCGTACTCCAAGCATTGTGTTCGAGCAAGAGGATGGCCAGCATGGCGGAAATAAGCGTCTCATATCAGTTCCCACCAATCAGATTAGGAAGCTTGTAAATCATCTCGGTCGCTCCTTCTTCCTTTCCAGGCTTTTCGATCTTGAAGTTCGCCCCGAGTTTGAGTCCGGGGAGATTATCGAGAAGGTTCGGGTTTTACCTCGGAAGATTCATCTCCATGCGGGAACTGATGCACCTCTTAATGTTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTGATGTGCCTCTTATGTTCAGAGGAGAGGATGTATGTCCAGGATTGCGGAAAGGATCTTATTTGAATACAATCAAGAAGACTGTTAAATACCTTTGTCCTGCCGATATCATTCCTCCATATATTGATGTCGATCTGAGTGAGTTAGATGTTGGCCAAAAGTTGGTTATGGGTGACCTCAAGGTTCATCCTGCATTAAAGCTTCTTCAATCGAAGGATGAGCCTGTATGTAAGATCGCAGGAGCCAGAGTTTCTGACCAGCAAAGGAAATCAAAATAA

Coding sequence (CDS)

ATGTTACGCTTCTACCACTCTCCCACTCTCACAAGAGTCCTCCTACTCCGCCGGTTTTCGTCGGCCGCCACCGCCGCCGTCCTCGATTCAGATCCCGAACCTCCATTTTCGTACTTGGAGGATCTTCCAAGACCCGATCCCAAGTACGCCGAGACAATCCTCGCCGTTCCTCGCTCCATCTCCGGCAAGAACATTTCCGCCAAAGAGCGCAAGGCTGGCCGTACTCCAAGCATTGTGTTCGAGCAAGAGGATGGCCAGCATGGCGGAAATAAGCGTCTCATATCAGTTCCCACCAATCAGATTAGGAAGCTTGTAAATCATCTCGGTCGCTCCTTCTTCCTTTCCAGGCTTTTCGATCTTGAAGTTCGCCCCGAGTTTGAGTCCGGGGAGATTATCGAGAAGGTTCGGGTTTTACCTCGGAAGATTCATCTCCATGCGGGAACTGATGCACCTCTTAATGTTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTGATGTGCCTCTTATGTTCAGAGGAGAGGATGTATGTCCAGGATTGCGGAAAGGATCTTATTTGAATACAATCAAGAAGACTGTTAAATACCTTTGTCCTGCCGATATCATTCCTCCATATATTGATGTCGATCTGAGTGAGTTAGATGTTGGCCAAAAGTTGGTTATGGGTGACCTCAAGGTTCATCCTGCATTAAAGCTTCTTCAATCGAAGGATGAGCCTGTATGTAAGATCGCAGGAGCCAGAGTTTCTGACCAGCAAAGGAAATCAAAATAA

Protein sequence

MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

Homology

[Close]

BLAST of Moc05g24770 vs. NCBI nr
Match: XP_022147798.1 (uncharacterized protein LOC111016648 [Momordica charantia])

HSP 1 Score: 513.8 bits (1322), Expect = 8.3e-142
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI 60
           MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI
Sbjct: 1   MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI 60

Query: 61  SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL 120
           SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL
Sbjct: 61  SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL 120

Query: 121 EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP 180
           EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP
Sbjct: 121 EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP 180

Query: 181 GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 240
           GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE
Sbjct: 181 GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 240

Query: 241 PVCKIAGARVSDQQRKSK 259
           PVCKIAGARVSDQQRKSK
Sbjct: 241 PVCKIAGARVSDQQRKSK 258

[Close]

BLAST of Moc05g24770 vs. NCBI nr
Match: XP_022973342.1 (uncharacterized protein LOC111471898 [Cucurbita maxima] >XP_022975177.1 uncharacterized protein LOC111474217 [Cucurbita maxima])

HSP 1 Score: 477.6 bits (1228), Expect = 6.6e-131
Identity = 238/260 (91.54%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPK+AETILA+PR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISV TNQ+RKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PP+IDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARVSDQQRKSK 259
           DEPVCKIAGAR SDQQRKSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Moc05g24770 vs. NCBI nr
Match: XP_022950760.1 (uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothetical protein SDJN03_10150, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028444.1 rplY [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130
Identity = 238/260 (91.54%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARVSDQQRKSK 259
           DEPVCKIAGAR SDQQRKSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Moc05g24770 vs. NCBI nr
Match: XP_023538842.1 (uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.2 bits (1219), Expect = 7.3e-130
Identity = 237/260 (91.15%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARVSDQQRKSK 259
           DEPVCKIAGAR SDQQ+KSK
Sbjct: 241 DEPVCKIAGARASDQQKKSK 260

[Close]

BLAST of Moc05g24770 vs. NCBI nr
Match: XP_038903089.1 (50S ribosomal protein L25 [Benincasa hispida])

HSP 1 Score: 471.1 bits (1211), Expect = 6.2e-129
Identity = 236/258 (91.47%), Postives = 246/258 (95.35%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI 60
           MLRFYHSPTL+RV  LRRFSSAATA VLDS  EPP SYLE  P+PDPKYAETILA+PRSI
Sbjct: 1   MLRFYHSPTLSRV--LRRFSSAATAPVLDSYSEPPLSYLEGFPKPDPKYAETILAIPRSI 60

Query: 61  SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL 120
           SGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLFDL
Sbjct: 61  SGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDL 120

Query: 121 EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP 180
           EVR EFESG+I+EKVRVLPRKIHLH+GTDAPLNVTFIRAPSHALLKVDVPL+FRGEDVCP
Sbjct: 121 EVRSEFESGDIVEKVRVLPRKIHLHSGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCP 180

Query: 181 GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 240
           GLRKGSYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE
Sbjct: 181 GLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 240

Query: 241 PVCKIAGARVSDQQRKSK 259
           PVCKIAGAR SDQQ+KSK
Sbjct: 241 PVCKIAGARASDQQKKSK 256

[Close]

BLAST of Moc05g24770 vs. ExPASy Swiss-Prot
Match: Q219F9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplY PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.6e-21
Identity = 62/187 (33.16%), Postives = 100/187 (53.48%), Query Frame = 0


Query: 55  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKR--LISVPTNQIRKLVNHLGRSF 114
           A  R   GK  +  ER+AGR P +++       G NK    ISV   ++R  +   GR  
Sbjct: 9   ATARPAGGKGAARAERRAGRVPGVIY-------GDNKPPVTISVDDTELRARI-LAGR-- 68

Query: 115 FLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLM 174
           FL+ +FD+E+          +K RV+PR  HL    D P++V F+R    AL++V VPL 
Sbjct: 69  FLTTIFDVELDG--------QKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLH 128

Query: 175 FRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPAL 234
            +  +  PG+++G  +N +  TV+    A+ IP +I+ D+S+LD+G  L + D+ +   +
Sbjct: 129 LKNAEGAPGVKRGGTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGV 177

Query: 235 KLLQSKD 240
           K L  +D
Sbjct: 189 KTLSRED 177

[Close]

BLAST of Moc05g24770 vs. ExPASy Swiss-Prot
Match: Q3SPM6 (50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=rplY PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-20
Identity = 61/188 (32.45%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 55  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK---RLISVPTNQIRKLVNHLGRS 114
           A  R  SGK  +  ER+AGR P++++        GNK   + ISV   ++R+ +   GR 
Sbjct: 9   ATARPKSGKGAARAERRAGRVPAVIY--------GNKQPPQPISVEEPELRQRI-LAGR- 68

Query: 115 FFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL 174
            FL+ +FD+ +          +K RV+PR  HL    D P++V F+R    A ++V VPL
Sbjct: 69  -FLTTIFDINLDG--------KKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPL 128

Query: 175 MFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPA 234
                DV PG+++G  +N +   +   C A+ IP +I+ D+  L++   L + DL++ P 
Sbjct: 129 RLLKADVAPGVKRGGTVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPG 177

Query: 235 LKLLQSKD 240
           +K L  +D
Sbjct: 189 VKPLARED 177

[Close]

BLAST of Moc05g24770 vs. ExPASy Swiss-Prot
Match: Q2ISF7 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=rplY PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-20
Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 0


Query: 55  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK--RLISVPTNQIRKLVNHLGRSF 114
           A  R  SGK  +  ER+AGR P +++       G NK    ISV    +R  +   GR  
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNKPPLPISVEDKDLRLRI-QAGR-- 68

Query: 115 FLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLM 174
           FL+ +FD+ +          +K RV+PR  HL    D P++V F+R    A +++ VPL 
Sbjct: 69  FLTTIFDVVLDG--------QKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLH 128

Query: 175 FRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPAL 234
            +G +  PG+++G   N +  TV    PAD IP +I+ D+S LD+G  L + D+ +   +
Sbjct: 129 LKGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGV 177

Query: 235 KLLQSKD 240
           K +  +D
Sbjct: 189 KSVSRED 177

[Close]

BLAST of Moc05g24770 vs. ExPASy Swiss-Prot
Match: Q6N1P8 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rplY PE=1 SV=3)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 57/185 (30.81%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 55  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFL 114
           A  R  SGK  +  ER+AGR P +++       G N+  + +   + ++L   +    FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68

Query: 115 SRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFR 174
           + +FD+ +          +K RV+PR  HL    D P++V F+R  + A ++V VPL  +
Sbjct: 69  TTVFDVVLDG--------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 175 GEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL 234
           G +V PG+++G   N +  TV+   PA+ IP +I+ D+S LD+G  L + D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 177

Query: 235 LQSKD 240
           +   D
Sbjct: 189 VSRDD 177

[Close]

BLAST of Moc05g24770 vs. ExPASy Swiss-Prot
Match: B3Q7X4 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=rplY PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 57/185 (30.81%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 55  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFL 114
           A  R  SGK  +  ER+AGR P +++       G N+  + +   + ++L   +    FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68

Query: 115 SRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFR 174
           + +FD+ +          +K RV+PR  HL    D P++V F+R  + A ++V VPL  +
Sbjct: 69  TTVFDVVLDG--------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 175 GEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL 234
           G +V PG+++G   N +  TV+   PA+ IP +I+ D+S LD+G  L + D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 177

Query: 235 LQSKD 240
           +   D
Sbjct: 189 VSRDD 177

[Close]

BLAST of Moc05g24770 vs. ExPASy TrEMBL
Match: A0A6J1D2A7 (uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016648 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.0e-142
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI 60
           MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI
Sbjct: 1   MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSI 60

Query: 61  SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL 120
           SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL
Sbjct: 61  SGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDL 120

Query: 121 EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP 180
           EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP
Sbjct: 121 EVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCP 180

Query: 181 GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 240
           GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE
Sbjct: 181 GLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE 240

Query: 241 PVCKIAGARVSDQQRKSK 259
           PVCKIAGARVSDQQRKSK
Sbjct: 241 PVCKIAGARVSDQQRKSK 258

[Close]

BLAST of Moc05g24770 vs. ExPASy TrEMBL
Match: A0A6J1ICC4 (uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.2e-131
Identity = 238/260 (91.54%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPK+AETILA+PR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISV TNQ+RKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PP+IDVDLSELDVGQKLVMGDLKVHPALKLLQSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARVSDQQRKSK 259
           DEPVCKIAGAR SDQQRKSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Moc05g24770 vs. ExPASy TrEMBL
Match: A0A6J1GGM6 (uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC111453766 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130
Identity = 238/260 (91.54%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARVSDQQRKSK 259
           DEPVCKIAGAR SDQQRKSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Moc05g24770 vs. ExPASy TrEMBL
Match: A0A5D3DPH9 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007100 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.9e-121
Identity = 225/262 (85.88%), Postives = 240/262 (91.60%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATA----AVLDSDPEPPFSYLEDLPRPDPKYAETILAV 60
           MLRFYHSPTL+RVLL RRFSSAATA      LDS  EP FSYLE  P+PDPKYAETILA+
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERK GR PSI+FEQEDGQHGGNKRLISV TNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 LFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGE 180
           LFDLEV  +FESG+I+EKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPL+FRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQ 240
           DVCPGLRKGSYLNTIK+TVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPVCKIAGARVSDQQRKSK 259
           SKDEPVCKIAGARVSDQQ+KSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Moc05g24770 vs. ExPASy TrEMBL
Match: A0A1S3B7N9 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.9e-121
Identity = 225/262 (85.88%), Postives = 240/262 (91.60%), Query Frame = 0


Query: 1   MLRFYHSPTLTRVLLLRRFSSAATA----AVLDSDPEPPFSYLEDLPRPDPKYAETILAV 60
           MLRFYHSPTL+RVLL RRFSSAATA      LDS  EP FSYLE  P+PDPKYAETILA+
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERK GR PSI+FEQEDGQHGGNKRLISV TNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 LFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGE 180
           LFDLEV  +FESG+I+EKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPL+FRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQ 240
           DVCPGLRKGSYLNTIK+TVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPVCKIAGARVSDQQRKSK 259
           SKDEPVCKIAGARVSDQQ+KSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Moc05g24770 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 374.8 bits (961), Expect = 5.6e-104
Identity = 187/243 (76.95%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 16  LRRFSSAATAAV-LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGR 75
           LR FS AA AA+ LD   E   +YL   PRPDPK+AETILAVPRS+SGK+ISAKERKAGR
Sbjct: 16  LRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGR 75

Query: 76  TPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEK 135
            PSI+FEQEDGQHGGNKRLISV TNQIRKLVNHLG SFFLSRLFD+EVR E  S E+IEK
Sbjct: 76  VPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEK 135

Query: 136 VRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKT 195
           VR LPR IHLH+GTDAPLNVTFIRAP  ALLKVD+PL+F G+DV PGL+KG+ LNTIK+T
Sbjct: 136 VRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRT 195

Query: 196 VKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQ 255
           VK+LCPA+IIPPYI+VDLS+LD+GQKLVMGDLKVHPALKL++SKDEP+ K+AG RV+D Q
Sbjct: 196 VKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDTQ 255

Query: 256 RKS 258
           +KS
Sbjct: 256 KKS 258

[Close]

BLAST of Moc05g24770 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 367.9 bits (943), Expect = 6.9e-102
Identity = 188/256 (73.44%), Postives = 214/256 (83.59%), Query Frame = 0


Query: 16  LRRFSSAATAAV-LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGR 75
           LR FS AA AA+ LD   E   +YL   PRPDPK+AETILAVPRS+SGK+ISAKERKAGR
Sbjct: 16  LRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGR 75

Query: 76  TPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEK 135
            PSI+FEQEDGQHGGNKRLISV TNQIRKLVNHLG SFFLSRLFD+EVR E  S E+IEK
Sbjct: 76  VPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEK 135

Query: 136 VRVLPR-------------KIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDVCPG 195
           VR LPR             KIHLH+GTDAPLNVTFIRAP  ALLKVD+PL+F G+DV PG
Sbjct: 136 VRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPG 195

Query: 196 LRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEP 255
           L+KG+ LNTIK+TVK+LCPA+IIPPYI+VDLS+LD+GQKLVMGDLKVHPALKL++SKDEP
Sbjct: 196 LKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEP 255

Query: 256 VCKIAGARVSDQQRKS 258
           + K+AG RV+D Q+KS
Sbjct: 256 IVKVAGGRVTDTQKKS 271

[Close]

BLAST of Moc05g24770 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 162.2 bits (409), Expect = 5.7e-40
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 51  ETILAVPRSISGKNISAKERKAGRTPSIVFEQE----DGQHGG--NKRLISVPTNQIRKL 110
           +TI A+PR  +G+ +SA++R  GR P++VF Q     D    G   K+L++    QI+ +
Sbjct: 34  QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93

Query: 111 VNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAL 170
           ++ +G  FF S  F L++R    S  ++E  RVLP K+H    T   LN+ F+ A     
Sbjct: 94  IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153

Query: 171 LKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMG 230
           LKVDVP++F+G D CPGL+KG  L TI+ T+K L PA+ IP  I+VD+S LD+  K+++ 
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQ 213

Query: 231 DLKVHPALKLLQSKDE--PVCKI 246
           D+  HP+LKLL SK+E  PVCKI
Sbjct: 214 DVVFHPSLKLL-SKNETMPVCKI 235

The following BLAST results are available for this feature:

BLAST of Moc05g24770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147798.1	8.3e-142	100.00	uncharacterized protein LOC111016648 [Momordica charantia]	[more]
XP_022973342.1	6.6e-131	91.54	uncharacterized protein LOC111471898 [Cucurbita maxima] >XP_022975177.1 uncharac...	[more]
XP_022950760.1	3.3e-130	91.54	uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothet...	[more]
XP_023538842.1	7.3e-130	91.15	uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo]	[more]
XP_038903089.1	6.2e-129	91.47	50S ribosomal protein L25 [Benincasa hispida]	[more]

BLAST of Moc05g24770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q219F9	7.6e-21	33.16	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605...	[more]
Q3SPM6	4.9e-20	32.45	50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 1...	[more]
Q2ISF7	4.9e-20	33.16	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 ...	[more]
Q6N1P8	1.1e-19	30.81	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CG...	[more]
B3Q7X4	1.1e-19	30.81	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960...	[more]

BLAST of Moc05g24770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2A7	4.0e-142	100.00	uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1ICC4	3.2e-131	91.54	uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217...	[more]
A0A6J1GGM6	1.6e-130	91.54	uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A5D3DPH9	3.9e-121	85.88	50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B7N9	3.9e-121	85.88	50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1	[more]

BLAST of Moc05g24770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23620.1	5.6e-104	76.95	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.2	6.9e-102	73.44	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT5G66860.1	5.7e-40	43.35	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029751	Ribosomal protein L25	PFAM	PF01386	Ribosomal_L25p	coord: 55..156 e-value: 5.2E-9 score: 36.5
IPR029751	Ribosomal protein L25	CDD	cd00495	Ribosomal_L25_TL5_CTC	coord: 52..158 e-value: 1.01602E-12 score: 60.5618
IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, N-terminal	GENE3D	2.40.240.10	Ribosomal Protein L25; Chain P	coord: 52..159 e-value: 1.0E-7 score: 34.0
IPR037121	Ribosomal protein L25, C-terminal	GENE3D	2.170.120.20	Ribosomal protein L25, beta domain	coord: 163..254 e-value: 3.9E-17 score: 64.3
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 165..248 e-value: 3.0E-20 score: 72.3
None	No IPR available	PANTHER	PTHR33284	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	coord: 16..256
None	No IPR available	PANTHER	PTHR33284:SF4	BNAA01G13300D PROTEIN	coord: 16..256
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	SUPERFAMILY	50715	Ribosomal protein L25-like	coord: 58..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g24770.1	Moc05g24770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome