Moc05g17430 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g17430
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr5: 12951197 .. 12951457 (+)
RNA-Seq ExpressionMoc05g17430
SyntenyMoc05g17430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGCCGTCCATTCGTCCACCACGTTTTGTCGTTGGCTACTAAGCAAGACCTTTCGAAACTCCGGGGCACTTATCGCATACCCAATTCCGTCCACATGCGCCTTCCGTCTGTGAATGAAAGAATAAACTCCCCTTATCTAGGCTGGATGAGCTTCTACTCGCAGATGTTCTCGAACGGGGTTAAACTTCCCCTTTCCCTTTTGGCCCAGGCTTTCCTGGTTGTTGCCGACATGGCTCTGTCTCAACTTGCTCCCTAA

mRNA sequence

ATGGCTCGCCGTCCATTCGTCCACCACGTTTTGTCGTTGGCTACTAAGCAAGACCTTTCGAAACTCCGGGGCACTTATCGCATACCCAATTCCGTCCACATGCGCCTTCCGTCTGTGAATGAAAGAATAAACTCCCCTTATCTAGGCTGGATGAGCTTCTACTCGCAGATGTTCTCGAACGGGGTTAAACTTCCCCTTTCCCTTTTGGCCCAGGCTTTCCTGGTTGTTGCCGACATGGCTCTGTCTCAACTTGCTCCCTAA

Coding sequence (CDS)

ATGGCTCGCCGTCCATTCGTCCACCACGTTTTGTCGTTGGCTACTAAGCAAGACCTTTCGAAACTCCGGGGCACTTATCGCATACCCAATTCCGTCCACATGCGCCTTCCGTCTGTGAATGAAAGAATAAACTCCCCTTATCTAGGCTGGATGAGCTTCTACTCGCAGATGTTCTCGAACGGGGTTAAACTTCCCCTTTCCCTTTTGGCCCAGGCTTTCCTGGTTGTTGCCGACATGGCTCTGTCTCAACTTGCTCCCTAA

Protein sequence

MARRPFVHHVLSLATKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPLSLLAQAFLVVADMALSQLAP
Homology
BLAST of Moc05g17430 vs. NCBI nr
Match: XP_021824477.1 (uncharacterized protein LOC110765618 [Prunus avium])

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-04
Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 12  SLATKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPLSLLAQ 71
           S  T++ L +LR  Y IP+S+ +R P+ NE+ ++P L W++  S M   GV+LPLS   Q
Sbjct: 139 STITRKRLRRLREEYSIPSSIRLRAPTKNEKPSTPPLEWVTLCSDMLKQGVRLPLSPFLQ 198

Query: 72  AFLVVADMALSQLAP 87
            ++    +A  Q+ P
Sbjct: 199 EWIARLGVAPHQMNP 213

BLAST of Moc05g17430 vs. NCBI nr
Match: GFY95598.1 (hypothetical protein Acr_10g0009830 [Actinidia rufa])

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-04
Identity = 27/83 (32.53%), Postives = 49/83 (59.04%), Query Frame = 0

Query: 4   RPFVHHVLSLATKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVK 63
           RP +    +  T+ +L +LR +  IP+ +H+RLP  ++ I    LG ++FY  +F +G++
Sbjct: 78  RPLLERETNTMTQGELDRLRKSCSIPSRIHIRLPEADKTIAFTRLGEVAFYEVLFQDGLR 137

Query: 64  LPLSLLAQAFLVVADMALSQLAP 87
           LP+    +  LV  ++  +QLAP
Sbjct: 138 LPIHATIRRILVYYNICPTQLAP 160

BLAST of Moc05g17430 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 4.6e-04
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 19  LSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPLSLLAQAFLVVAD 78
           L  LR  + IP ++ +RLP   ER ++P  GW++ Y +MF  G++LPL    Q FL    
Sbjct: 56  LGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTG 115

Query: 79  MALSQLAP 87
           +A +Q+AP
Sbjct: 116 LAPAQVAP 123

BLAST of Moc05g17430 vs. ExPASy TrEMBL
Match: A0A6P5TBM4 (uncharacterized protein LOC110765618 OS=Prunus avium OX=42229 GN=LOC110765618 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.0e-04
Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 12  SLATKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPLSLLAQ 71
           S  T++ L +LR  Y IP+S+ +R P+ NE+ ++P L W++  S M   GV+LPLS   Q
Sbjct: 139 STITRKRLRRLREEYSIPSSIRLRAPTKNEKPSTPPLEWVTLCSDMLKQGVRLPLSPFLQ 198

Query: 72  AFLVVADMALSQLAP 87
            ++    +A  Q+ P
Sbjct: 199 EWIARLGVAPHQMNP 213

BLAST of Moc05g17430 vs. ExPASy TrEMBL
Match: A0A7J0FA74 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_10g0009830 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04
Identity = 27/83 (32.53%), Postives = 49/83 (59.04%), Query Frame = 0

Query: 4   RPFVHHVLSLATKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVK 63
           RP +    +  T+ +L +LR +  IP+ +H+RLP  ++ I    LG ++FY  +F +G++
Sbjct: 78  RPLLERETNTMTQGELDRLRKSCSIPSRIHIRLPEADKTIAFTRLGEVAFYEVLFQDGLR 137

Query: 64  LPLSLLAQAFLVVADMALSQLAP 87
           LP+    +  LV  ++  +QLAP
Sbjct: 138 LPIHATIRRILVYYNICPTQLAP 160

BLAST of Moc05g17430 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-04
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 19  LSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPLSLLAQAFLVVAD 78
           L  LR  + IP ++ +RLP   ER ++P  GW++ Y +MF  G++LPL    Q FL    
Sbjct: 56  LGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTG 115

Query: 79  MALSQLAP 87
           +A +Q+AP
Sbjct: 116 LAPAQVAP 123

BLAST of Moc05g17430 vs. ExPASy TrEMBL
Match: A0A7J7CBQ7 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G00248 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.5e-04
Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 0

Query: 12  SLATKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPL-SLLA 71
           S  T+ D+ +LR  YRIP SV +R PS +ER +    GW  FY  MF  G++ P+ SLLA
Sbjct: 59  SKLTEDDMGRLRRLYRIPESVEIRPPSNDERADHEVPGWSVFYEIMFKVGIRYPVPSLLA 118

BLAST of Moc05g17430 vs. ExPASy TrEMBL
Match: A0A4Y1RFR2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_013798 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-04
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 0

Query: 15  TKQDLSKLRGTYRIPNSVHMRLPSVNERINSPYLGWMSFYSQMFSNGVKLPLSLLAQAFL 74
           T+++L ++R  Y IP+SV MR+PS  E ++ P  G ++F++ M   GV+LPL    Q  L
Sbjct: 204 TERELQRIRAEYHIPDSVKMRIPSPTESLSDPGDGEVAFFTDMMVQGVRLPLQPAVQKIL 263

Query: 75  VVADMALSQLAP 87
                A  Q  P
Sbjct: 264 AQIGYAPGQYNP 275

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_021824477.12.1e-0437.33uncharacterized protein LOC110765618 [Prunus avium][more]
GFY95598.12.7e-0432.53hypothetical protein Acr_10g0009830 [Actinidia rufa][more]
XP_022159063.14.6e-0439.71uncharacterized protein LOC111025502, partial [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P5TBM41.0e-0437.33uncharacterized protein LOC110765618 OS=Prunus avium OX=42229 GN=LOC110765618 PE... [more]
A0A7J0FA741.3e-0432.53Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_10g0009830 PE=4 SV=1[more]
A0A6J1DXS52.2e-0439.71uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A7J7CBQ76.5e-0445.90Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G00248 ... [more]
A0A4Y1RFR28.5e-0437.50Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_013798 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g17430.1Moc05g17430.1mRNA