Moc05g17150 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g17150
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Locationchr5: 12804126 .. 12804746 (-)
RNA-Seq ExpressionMoc05g17150
SyntenyMoc05g17150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTGAGTTCAGCGATACACATTAAGCAATTTGTTGTTTGTAATACAGAAACTATAGAGAATAGGCAAAGGTACACACCTGATAGAACTATGAGCTTCAGCAATAATCGATGGAACCCCCGGCCAGTCGAGTCCAATCTAAAATTGAATGTGGATGCGTCATTTAGAGCGGAGGAGAAACGTTTTGGAATGGGAGCAGTAATCAGAGACAAAAAAGGTGAAGTTTACCTTACCTTTCTTCAGAGTAGGCGAGACATATTATCTGTTGCAGAGGCTGAGGCAATGGCGATCAGAGACAGTTTGTGGACGGCGATTGAGATGGGATTCACCCAGCTAATTATTGAAACTGATTCTCTAAGTGTTTTCTCAATGATTCATTCAAATAAAGAAGATCGTTCTCAGTTAGGATTAATTGTGGATGAAATCAAAACTCTTTCGCGGTTGTTAAGGGACACGAAATTTACCCATCGTCGCCACAGTTGCAATCAGGTGGCGCATGCAGCGGCGAAGCTTGCCGTCGAGGAGAACATCGATGGCGTCTGGTTAGAGAAAACGCCGGCAAAAATGGAGCGAATTGTGCCTGAAGATGTCACACATTTACCTTTTGAGGAGAGTTGA

mRNA sequence

ATGGGAGTGAGTTCAGCGATACACATTAAGCAATTTGTTGTTTGTAATACAGAAACTATAGAGAATAGGCAAAGGTACACACCTGATAGAACTATGAGCTTCAGCAATAATCGATGGAACCCCCGGCCAGTCGAGTCCAATCTAAAATTGAATGTGGATGCGTCATTTAGAGCGGAGGAGAAACGTTTTGGAATGGGAGCAGTAATCAGAGACAAAAAAGGTGAAGTTTACCTTACCTTTCTTCAGAGTAGGCGAGACATATTATCTGTTGCAGAGGCTGAGGCAATGGCGATCAGAGACAGTTTGTGGACGGCGATTGAGATGGGATTCACCCAGCTAATTATTGAAACTGATTCTCTAAGTGTTTTCTCAATGATTCATTCAAATAAAGAAGATCGTTCTCAGTTAGGATTAATTGTGGATGAAATCAAAACTCTTTCGCGGTTGTTAAGGGACACGAAATTTACCCATCGTCGCCACAGTTGCAATCAGGTGGCGCATGCAGCGGCGAAGCTTGCCGTCGAGGAGAACATCGATGGCGTCTGGTTAGAGAAAACGCCGGCAAAAATGGAGCGAATTGTGCCTGAAGATGTCACACATTTACCTTTTGAGGAGAGTTGA

Coding sequence (CDS)

ATGGGAGTGAGTTCAGCGATACACATTAAGCAATTTGTTGTTTGTAATACAGAAACTATAGAGAATAGGCAAAGGTACACACCTGATAGAACTATGAGCTTCAGCAATAATCGATGGAACCCCCGGCCAGTCGAGTCCAATCTAAAATTGAATGTGGATGCGTCATTTAGAGCGGAGGAGAAACGTTTTGGAATGGGAGCAGTAATCAGAGACAAAAAAGGTGAAGTTTACCTTACCTTTCTTCAGAGTAGGCGAGACATATTATCTGTTGCAGAGGCTGAGGCAATGGCGATCAGAGACAGTTTGTGGACGGCGATTGAGATGGGATTCACCCAGCTAATTATTGAAACTGATTCTCTAAGTGTTTTCTCAATGATTCATTCAAATAAAGAAGATCGTTCTCAGTTAGGATTAATTGTGGATGAAATCAAAACTCTTTCGCGGTTGTTAAGGGACACGAAATTTACCCATCGTCGCCACAGTTGCAATCAGGTGGCGCATGCAGCGGCGAAGCTTGCCGTCGAGGAGAACATCGATGGCGTCTGGTTAGAGAAAACGCCGGCAAAAATGGAGCGAATTGTGCCTGAAGATGTCACACATTTACCTTTTGAGGAGAGTTGA

Protein sequence

MGVSSAIHIKQFVVCNTETIENRQRYTPDRTMSFSNNRWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMAIRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTHRRHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPEDVTHLPFEES
Homology
BLAST of Moc05g17150 vs. NCBI nr
Match: XP_030930636.1 (uncharacterized protein LOC115956377 [Quercus lobata])

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 0

Query: 39  WNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMAI 98
           W+P P +S  KLN DA+  +E    G+GA+IR++KGEV          ++  A AE +A 
Sbjct: 37  WHP-PPDSAFKLNFDAAVFSELSCSGVGAMIRNEKGEVMAAMSAKGPHVVDSAVAEVIAC 96

Query: 99  RDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTHR 158
           R +L  A E GFT L++E D+LSV   + ++K D S LG I+ +IK L+R  R   F++ 
Sbjct: 97  RRALEFACEAGFTDLVVEGDNLSVMKSLAASKTDHSWLGHIIQDIKWLTRSFRKVLFSYV 156

Query: 159 RHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPEDVTHL 202
           R + N VAH  A+ A   + D  W+E  P  +   +  D + L
Sbjct: 157 RRAANSVAHGLARYAKYVHEDMYWIEDNPPPVLEALYYDFSQL 198

BLAST of Moc05g17150 vs. NCBI nr
Match: XP_010687479.1 (PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-18
Identity = 64/163 (39.26%), Postives = 89/163 (54.60%), Query Frame = 0

Query: 38  RWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMA 97
           RW   P E + KLN DA+  A + + GMGAV+RD  G+V        R    V  AEA+ 
Sbjct: 325 RWK-APREGDYKLNTDAAMFA-DNQVGMGAVVRDFSGDVLAAMCCKMRGGDEVDIAEALC 384

Query: 98  IRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTH 157
            R  L  A+E GF  L++E D+L +FS +  NK + S  G IV +I+ L        F+H
Sbjct: 385 ARRGLQIAMEAGFRSLVLEVDNLKLFSYLSRNKREASPFGFIVQDIQRLVHQCSSVSFSH 444

Query: 158 RRHSCNQVAHAAAKLAVEENIDG--VWLEKTPAKMERIVPEDV 199
            R   N+VAH  AK+    +IDG  VWLE+ P ++ +IV  D+
Sbjct: 445 TRRKGNEVAHRLAKMC--NSIDGLKVWLEEVPLEIAKIVIADI 483

BLAST of Moc05g17150 vs. NCBI nr
Match: XP_010681661.1 (PREDICTED: uncharacterized protein LOC104896591 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 99.4 bits (246), Expect = 3.9e-17
Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 0

Query: 39  WNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMAI 98
           W P PVE + K+N DA+   +++  G+G V+RD  GEV           L V EAEA A 
Sbjct: 35  WKP-PVEGSYKINADAAI-FKDRTVGLGGVMRDAAGEVMGATCMHLEVELGVDEAEACAA 94

Query: 99  RDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTHR 158
           R +L TA+EMG   +++E+DSL V S + + K D S  G +V++I  L        F H 
Sbjct: 95  RHALQTAVEMGLRHIVLESDSLKVISHLLTKKGDESSFGNVVEDILWLGGFFSSISFNHV 154

Query: 159 RHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPEDV 199
           R   N+VAH  A+ + E     VW+E+ P +    V  D+
Sbjct: 155 RREGNRVAHTIAQRSKEYGCMRVWMEEVPPEAVACVISDL 192

BLAST of Moc05g17150 vs. NCBI nr
Match: XP_023915286.1 (uncharacterized protein LOC112026812 [Quercus suber])

HSP 1 Score: 98.2 bits (243), Expect = 8.7e-17
Identity = 63/170 (37.06%), Postives = 91/170 (53.53%), Query Frame = 0

Query: 18   ETIENRQRYTPDRTMSFSNNRWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVY 77
            E +E R       +++ S  RW P PV S  KLN D +  ++    G+G +IR+  G+V 
Sbjct: 883  EFVEARTHLAIPESLAHS-QRWQP-PVGSRYKLNFDVAVFSDISASGVGVIIRNGDGQVM 942

Query: 78   LTFLQSRRDILSVAEAEAMAIRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLG 137
                     +    EAE +A R  L  A+E GF  LI+E D+L+V   + SN+ D S+LG
Sbjct: 943  AALSARGPAVTDGDEAEVLACRRGLEFAMEAGFGDLIVEGDNLNVMQAVASNRSDWSRLG 1002

Query: 138  LIVDEIKTLSRLLRDTKFTHRRHSCNQVAHAAAKLAVEENIDGVWLEKTP 188
             +VD+++ L+  LR   F   R S N VAH+ A+ A   + D VWLE TP
Sbjct: 1003 NLVDDVRHLAGRLRLVDFQCIRRSANGVAHSLARFARNISEDCVWLEDTP 1050

BLAST of Moc05g17150 vs. NCBI nr
Match: XP_042947096.1 (uncharacterized protein LOC122280136 [Carya illinoinensis])

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-16
Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 0

Query: 32  MSFSNNRWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVA 91
           +S S   WNP PV    K N DA F  ++ R G+G V+RD KG +  + +  +R++ S  
Sbjct: 66  ISDSKQVWNP-PVWPWYKANFDAGFNRDKGRMGIGVVVRDSKGALIGSLVAPKRNVTSTF 125

Query: 92  EAEAMAIRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLR 151
           +AE  A+  ++    E+G   +  E D+ +V   ++S  ED S  G ++++I+ L     
Sbjct: 126 QAECHALHRAMVFCTELGLMHVCFEGDAKAVADAVNSETEDNSWDGQLIEDIRQLKAAYP 185

Query: 152 DTKFTHRRHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPEDV 199
             K    R S N  AH AAKLAV  + + VWLE  P+++ R   +++
Sbjct: 186 VWKLVFVRRSVNASAHVAAKLAVNSSCESVWLEDGPSEVRRSTMDEL 231

BLAST of Moc05g17150 vs. ExPASy TrEMBL
Match: A0A7N2N391 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16
Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 0

Query: 38  RWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMA 97
           RW P P   N K+N+DA+    +K  G G VIR+++GE           + +  EAEA+A
Sbjct: 26  RWKP-PTGLNYKVNIDATIFPRQKASGFGVVIRNERGETMAAVSARGPLVQNSKEAEALA 85

Query: 98  IRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTH 157
            R ++  A+++GF  + +E D++SV S I S   +R++LG + D+I+ + R  R     H
Sbjct: 86  CRKAVEVAMDLGFRDVTLEGDNISVMSSISSTSINRARLGFVYDDIRCMGRGFRTFHVNH 145

Query: 158 RRHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPEDVTHL 202
            R + N VAH+ A   + E  + VWLE+ P      +  D  H+
Sbjct: 146 VRRTANTVAHSLADAGLIEG-EMVWLEQDPPPARDALYSDSCHI 187

BLAST of Moc05g17150 vs. ExPASy TrEMBL
Match: A0A6P9ETQ1 (uncharacterized protein LOC108983473 OS=Juglans regia OX=51240 GN=LOC108983473 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-16
Identity = 52/155 (33.55%), Postives = 86/155 (55.48%), Query Frame = 0

Query: 43  PVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMAIRDSL 102
           PV+ + K+N D +F     + GMG VIRDKKGEV      SRR+  +   AE MA+  ++
Sbjct: 162 PVDVDFKVNFDGAFDQSSSKIGMGVVIRDKKGEVVAALSASRREGQNAFVAEGMALWRAM 221

Query: 103 WTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTHRRHSC 162
              +E+G   +  E DS  +   + S++E+ S+ G IV++IK L     + K        
Sbjct: 222 ELCLEIGMVDVEFEGDSKELIEAVMSDEEEDSRWGHIVEDIKQLRHQYNNWKVVFNYRES 281

Query: 163 NQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPED 198
           N+VAH  AK+A+  + + VW+E+ P+ + + + +D
Sbjct: 282 NEVAHNLAKMALLIDEELVWIEEVPSSIHQYIVKD 316

BLAST of Moc05g17150 vs. ExPASy TrEMBL
Match: A0A2I4ENH2 (uncharacterized protein LOC108991215 OS=Juglans regia OX=51240 GN=LOC108991215 PE=4 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 6.1e-16
Identity = 51/155 (32.90%), Postives = 86/155 (55.48%), Query Frame = 0

Query: 43  PVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMAIRDSL 102
           PV+ + K+N D +F     + GMG VIRDKKGEV      SRR+  +   AE MA+  ++
Sbjct: 162 PVDVDFKVNFDGAFDQSSSKIGMGVVIRDKKGEVVAALSASRREGQNAFVAEGMALWRAM 221

Query: 103 WTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTHRRHSC 162
              +E+G   +  + DS  +   + S++E+ S+ G IV++IK L     + K        
Sbjct: 222 EFCLEIGMVDVEFDGDSKELIEAVMSDEEEDSRWGQIVEDIKQLRHQYSNWKVVFNYRES 281

Query: 163 NQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPED 198
           N+VAH  AK+A+  + + VW+E+ P+ + + + +D
Sbjct: 282 NEVAHNLAKMALLFDEELVWIEEVPSSIHQYIVKD 316

BLAST of Moc05g17150 vs. ExPASy TrEMBL
Match: A0A5B7BU49 (RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041820 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.0e-16
Identity = 68/188 (36.17%), Postives = 90/188 (47.87%), Query Frame = 0

Query: 14  VCNTETIENRQRYTPDRTMSFSNNRWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKK 73
           V +  T + RQ+      +   +  W+P P E   KLNV AS+   E   G+G VIRD K
Sbjct: 27  VMDFRTAQIRQQVMAVSRVQVGDVVWSP-PREGIFKLNVHASWVLGESCGGIGGVIRDWK 86

Query: 74  GEVYLTFLQSRRDILSVAEAEAMAIRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDR 133
           GEV   F +  R    +  AEA+AI   L  A ++G   L +E D LSV   I S+ ED 
Sbjct: 87  GEVIGGFAKQIRTCSRIDFAEALAILHGLMFAKDVGLQDLSVEGDCLSVLIAIESSVEDL 146

Query: 134 SQLGLIVDEIKTLSRLLRDTKFTHRRHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERI 193
           S+LG + D IK          F H R + N VAH  A  A   N +  WLE  P +  R 
Sbjct: 147 SELGHVFDHIKQCRDGFHSCDFGHVRRAANSVAHEIAVFARAVNDEVFWLEDLPERFLRS 206

Query: 194 VPEDVTHL 202
           +  D+  L
Sbjct: 207 LDSDLASL 213

BLAST of Moc05g17150 vs. ExPASy TrEMBL
Match: A0A7J8S5Z1 (RNase H domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_007121 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.0e-16
Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 0

Query: 37  NRWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAM 96
           +RW P P  S +KLN DA+++A+  +  +G VIR+KKGEV  + +    +IL V  AEA+
Sbjct: 38  DRWKP-PQNSWVKLNFDAAYKAQLNKSCLGFVIRNKKGEVIGSGITLHSNILDVGLAEAV 97

Query: 97  AIRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFT 156
           A    L  A E GF  + +E D+  V   I   +E R+ L  ++ +IK L        F 
Sbjct: 98  ACYQGLLFAKETGFVNVEVEGDARVVIEKIIQGEEGRADLDSVIADIKVLKNYFHQISFK 157

Query: 157 HRRHSCNQVAHAAAKLAVEENIDGVWLEKTPAKMERIVPEDVT 200
           H R   NQVAH  A+    ++ +  W+E  PA    +V  + T
Sbjct: 158 HVRREANQVAHIIAREGHSKSENTFWIEDIPAVARELVAAEET 199

BLAST of Moc05g17150 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 40/137 (29.20%), Postives = 67/137 (48.91%), Query Frame = 0

Query: 35  SNNRWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAE 94
           S  RW P P    +K N DA++  + +R G+G V+R++KGEV     ++   + SV EAE
Sbjct: 416 SCGRWRP-PPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAE 475

Query: 95  AMAIRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTK 154
             A+R ++ +     +  +I E+DS  V   I +N E    L   + +++ L     + K
Sbjct: 476 LEAMRWAVLSLSRFQYNYVIFESDS-QVLIEILNNDEIWPSLKPTIQDLQRLLSQFTEVK 535

Query: 155 FTHRRHSCNQVAHAAAK 172
           F       N +A   A+
Sbjct: 536 FVFIPREGNTLAERVAR 550

BLAST of Moc05g17150 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 36/125 (28.80%), Postives = 62/125 (49.60%), Query Frame = 0

Query: 52  VDASFRAEEKRFGMGAVIR--DKKGEVYLTFLQSRRDILSVAEAEAMAIRDSLWTAIEMG 111
           VDA+++ +    G G V +      +   TF    R   S   AEA AI+ ++  A+++ 
Sbjct: 164 VDAAWQQQSSLAGSGWVFQATSHSEKEITTFSAGCRRFPSPLAAEAWAIKSAMLHALQLE 223

Query: 112 FTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTHRRHSCNQVAHAA 171
            + L++ +DS S+   ++SN       GL+V EI+++    R   F       N +A AA
Sbjct: 224 RSDLLVLSDSKSIVDALNSNVSLNEIFGLLV-EIRSIRNRFRSISFQFIPRLVNSIADAA 283

Query: 172 AKLAV 175
           AKL++
Sbjct: 284 AKLSL 287

BLAST of Moc05g17150 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 33/137 (24.09%), Postives = 72/137 (52.55%), Query Frame = 0

Query: 38  RWNPRPVESNLKLNVDASFRAEEKRFGMGAVIRDKKGEVYLTFLQSRRDILSVAEAEAMA 97
           +W   P +  +K N DA+++ E  R G+G ++R++ G V     ++     +V EAE  A
Sbjct: 136 QWKAPPYQW-VKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEA 195

Query: 98  IRDSLWTAIEMGFTQLIIETDSLSVFSMIHSNKEDRSQLGLIVDEIKTLSRLLRDTKFTH 157
           +R ++ T     + ++I E+D+ ++ ++++S+ +    L   +++I+ L     + KF  
Sbjct: 196 LRWAVLTMSRFNYKRIIFESDAQALVNLLNSD-DFWPTLQPALEDIQQLLHHFEEVKFEF 255

Query: 158 RRHSCNQVAHAAAKLAV 175
                N+VA   A+ ++
Sbjct: 256 TPRGGNKVADRIARESI 270

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030930636.13.5e-1837.42uncharacterized protein LOC115956377 [Quercus lobata][more]
XP_010687479.14.6e-1839.26PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris subsp. vulgaris][more]
XP_010681661.13.9e-1736.88PREDICTED: uncharacterized protein LOC104896591 [Beta vulgaris subsp. vulgaris][more]
XP_023915286.18.7e-1737.06uncharacterized protein LOC112026812 [Quercus suber][more]
XP_042947096.11.9e-1632.93uncharacterized protein LOC122280136 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7N2N3911.6e-1633.54RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A6P9ETQ12.1e-1633.55uncharacterized protein LOC108983473 OS=Juglans regia OX=51240 GN=LOC108983473 P... [more]
A0A2I4ENH26.1e-1632.90uncharacterized protein LOC108991215 OS=Juglans regia OX=51240 GN=LOC108991215 P... [more]
A0A5B7BU498.0e-1636.17RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=... [more]
A0A7J8S5Z18.0e-1634.97RNase H domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_0071... [more]
Match NameE-valueIdentityDescription
AT4G29090.13.0e-0729.20Ribonuclease H-like superfamily protein [more]
AT1G10000.11.3e-0528.80Ribonuclease H-like superfamily protein [more]
AT2G34320.11.3e-0524.09Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 46..177
e-value: 6.2E-18
score: 67.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 51..173
e-value: 1.5E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 36..197
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 36..197
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 50..171
e-value: 7.2899E-28
score: 100.081
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 48..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g17150.1Moc05g17150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity