Moc05g16330 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g16330
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposon gag protein
Locationchr5: 12270897 .. 12277011 (-)
RNA-Seq ExpressionMoc05g16330
SyntenyMoc05g16330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCTGTATTCGATCGCATCAAGCCTTCAGCTACTCGACCTTCAGTCTTTCAGAGGATGAGTATGGCCACTGCAAAAGAGGAAAGTCAATGTGTTACATACATCCCCACTCGATCTTCAGTATTTCAAAGGCTAAGCATCTCCACGTCAAAGAAAAATCAATCTTTGAAATCTGTTTTTGATTGTCTCAAAACGTCAAACGATCAATACGAAAGAATGATGAAGACCGTGGAAGCAAAATCATCCGATGAAGTGAATGATGAGAAGAAAATCACAGCATTGTTCCTTTACGTATGAAAAGAAAATTCTCCCTTCTCATAAATACAGAAGGTTCCTTAAAAGTATAACAAAAACTTTTCATATCAACAAATCCTAAAAATGGAGGATATAGAAGTTGTGATGAAAATGAGAGCAATTGAAATACAACACTCCTTATCGTAAGAGTCTAAACTACATGATACTCCTGGCCCGCATGAGTTTAAAAGGTGAACGGCCAAAAAAAAAAATCTTGTATTTGAACTACGTTATGACTTGATCTCTTCCTAGGATACGTAGGCAGCTTAAAGAAATCTTTAAGTTCAGTCCAAGTTTTTATAAAAAAAAAACTTAAAAAAAAAAATATGGCGACACTACAATAACGTTGCAAAATGCAACCTTACCAAGAGTGACGATACGACGCTTAACCCTATTGAACGCTAGCTTTGTAGCAGAATGAAGGATGGTCACTGAGGGCATATACCATCAAATTAGGTTGTGCCCCTCATGATAAGTATCATCCCCCAAACTCGATCTTTGTTTGATGGTTGGTGAAAATGTTGCTGCCAATTGATCGTTGGTGAAGATATTGTAGGCGATTAATTAACCGTTAGTGAAGAAGTTGCAATCGCTTGATCCTTGGCGAATGAATTGTAGCTGATTGATCATTGGCAAATATATTGCAAGATTCATCGTTGTCAAAGATATTGCACTCGCTTGATGGTTTGCGAAGAAGTTGCAATCACTTAATCGTTGGCGAAAAAGTTGCAACCAATTTATTGTTGGCGAAGATGTTGCAGACGCTTGATCATTGACGGAGATATTGCAACTGATTGATCATTAGCGAATAAGTTGTAGCCACATGATCGTTAGTAAAGAAATTGCAGCTTTGCGAAAAAAAATTGTAGCTGCTTGATCGTTGGTGAATAAATTGTAGTCGCCGAATGTTATTCCTATATAGGCGTCATCCCCGAAAGGATGATAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGCCAGACGATATCCCTATATAGGCGTCATCCCCGAAAGAATGGTAGCCGTGAGAGATACTTCACTAAATTAGGTGGCCTTGTTCCACGAAGATGTGTGAACCGGACGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAGTTGTAACGCCTCGCGTTACTCAGGTTAGTTATCTCGAGTCCCCGGACCCTTTTTCTTAGAAATTTCTTTTTATTTAATTTCATTGTTCATTTCATTGTATTTCGAGCCGCTGTGGTTATTGTTATAGTGTTGAAGTGTACTTACGTATTCAATTATTGTGTAACGAGGAAATTGCTTTCTCTATAATTATTCCGGTCCGTTGGGCCCAAATTAAGTATCTAAGTAACTGGGCCTTTCTTGTTTTAAAACAAGAGGGAAGAAGAAAAGGGCCTAGCCCAAGTGGGCCCCTTCTTGTAAAAAAAAACAAAAGGAAGGTAAGAGGAAACCCTAGCCCTCAACAACCTCCCCTGTAACGCCCCGCGTTACTTAGGTTAGCTTGCCCCGAGTTCCGGAAAATTTTATAACAAAATGGATTTTTATTTATTGATTTATTGATTTATTTCATTGTTATTCTTAATTCATTCATCAGTGAGTTAGTTACAGTTTGTATTGTTACAGTTTTAGTGTTGAGTTAGTAGCGTGTAGTTATTTATCAAGTTACATTTAGTACGGATTCCCATTATGCGACACTTGTTTTGGATCATTGGGCCAATTACGAAACTCTATTATTGGTTTGTTTTAACAAGGAAGGGTTGGGTAAGTGGGCCTTAAACATAAGGAAAAGAACCCAAGCCCAAAGGAGTTAAAAGTTTGAAACAAGAAAAGGGAACCCTAGCCACTTGTTCTCGTTCCTCTTCTCCTTTCCCCCTTTTCTGCTCTTGTTGAAGTCGTCGGCCACCCCCTCCACTCGGACTCTCCCTCTCCGACACAGCAGCACCGACGGCAGCCATCTCCGGCGAACACAGCGGCAGCAGCGGCGGGCAACGGTGGTGTGCGACGATCAGCGACGGCGCGTGACATTCGGACAGCTGCAGGAGGCATCGATACACGTGGGGCTATGTTCGCGGCGTCCTTTCTCCGATTCAACAAGCCTAACGACCTCGAACAACTTAGATCCGTGAAACCCGGTAACTTTTCTTTGACCCACCTTTGTTCGAAGTTAGATTTGGAGTACCCACAGCCAAACGAAATCGATTTAGAATACCCACACCTAAGTGGGGTTGTTTTGTAGCAAGGGACATTGAAACGAAGCCGTTGGAGATCGTATTGGACGTTTTTCACTGCTGCAAAAAACGTGGACAGCAGCGTATTGGTGGTGTTCGGCGATTATCTACATCTGTTTGAAACCCGATTTACGCTACCCACGTCTTGGCAAGCTAGATCTAATTTACCCACACCTATACGAAGTCGTTTTGCGGTGTGAGGCCGACGCAAACTTAAACACGCGGTTGTGTAAGTAGCACCAGGGGGCGAGTGCGTGCGTTATTTAGCATTAACAGAATGTTCTTGATGCTGTTTTTTTTGTTTTTCTTGTTAAAATAATTTAAATGAGCATGTAAGGATTGTTGGTTTGATTTGTGAATTCTAGCGATCTTGTTGCCGTATTTCTATTATTGAACACTTTTGAGGAAACATGCTTCCTATTCTTGTTGTTGTAGGTGACTAGTAGATTCTAAACTGTTGTAGTTAGAAGTAATTGGCTCATGACGTTTTGCAAATGGGATGTAGATGAAATGCTAGCTTGGTTACACCGATAATTTAATTCATATTGTCTGGTTGTGAGCTGTTGGATGAATTTTGTTTATTACGTGGAAAAGCATGTTTGTAAACGGTGCAGTGATTTAGAATGTGGGAGGTTTACTTGTAGGTGGTCATGGAAGGGTTAGTGAAGTGGTGAAGGGTGAAGGGTAAAGGGACGGGTTTCATAGTTCGTTAACCATGGGTGTTCTGACCTGAAAAATGCATATAAATCGCTTGGAGGTTCAAAGCCTTGAGTAGTGGCCTTGGGGATAAATGACAAGGCCAGACGTCAAATTTCTGTAAACGTGTATTGGGGTCTTGGGGATAAATGTCAAGGACCAATACGCTGGGAAGTCATCGGTACCTTCGGAATAAACGGCAAAGACCGGTGCACAGTTCAGGCCTTGGGAATAAATGGCAAGGCCGAACGTCAAGTTTCTGGAGAGGAGTATTGAGGCCTTGGGGATAAATGTCAAGGGTCAATACGACTCGAGGAGTTAGGCTTGAGCGATTAAAAAAGAGTGGAGCTTGTGAAGTAGTGGTGTTTGGCCTTGGGAATAAATGGCAAGGTCGGACATCAAGTACTGGAGAAGGAGGAGGTACGGTGACTTGGGAATAAATGTCAAGAGCCGTCATGCCTCGAGAAGTTAAGCGGGGAGTGATAAAGGGGGGTGTTGAGGAAGGTTTAGTACTATGAAATAAGGGCTAGCGATTCATGGGTTGTGGTATTGGTAGTTTCGACGCTTAGTTGTTGTATGTAAATGTCAAGTTATTTGTTCGCTATCTCCCTCTACTTATTTGGTTGCCTTGCTCTTGTTTTGTTCTAAATGTCAAGTTAATTGTTCGCTATCTCTCACTGCTTATTTGATTGCCTCGCTATTGTTTTGTTCTTTATGTTGTGACTGTGAGCATAATTTATTTTGTGCTAGTTAGAAAGTGCTACTTACGGAGTACCTTATGTACTCACCCCCCCTTTGTACCTTTATATGATTCAGGTGTGAACGGGGTCGACTGCGGTGATGATATGGAGAGGGCTTGACCGAGGAAGGATCACTAGTTTAGTTAGTGAGGATAGGGGGAAGGGTAGTTGGGTACGAGTAGCCTTGAGACATATGTTATTGCTAGGTGTGAACCGCGGAGGAAATTTGGTATTCTTTAGAACTACTTTAATTGTTATGGATGTTGTTGGTAAACACGTCGTTGTTGTCATTGGAGTTTAGGTGCACGGTTGTTTTACTTATTTAATAATTTTTGCCACTGAGGCGAATTTGAGATGTTGTTGTTTTCTTTTAAATTGCCCACGGAGGGCGGAGTTCTGACAGTTTATGACATTTATATTTCTGTTAGAACGTATGGAAGTCGAAGCTTTATTTCATCTAAATTATTTTCCAGGAGGTTGCTTGTCTCGTGTTTAGAGTTAAGGTTAGCCAGAAGAATTATTTAGCGTTGCCTAGAATGTTTATATGAAATCTTGGGGCGTTACATCCCCATTCGTGAATCTTTTCTTCCCCTCTCCGTTTTAGTTTTCGTGTTCCTCCTTCTACCGGCGCCTCAACCCTCACCGAAACACTCGACGGACGGCGACCACCGGCCACTTGACAGCAGCAACGGTAGGCGACGGCGCGGTAGGTGGCGCGGCAGGCATCGGCGGCGGCGACTTCGGGCAGCGGCAGTGTGCAGCTTCGGGCAGCAGCAGTTCGCGGACGACGGCAGCAGTGGTGCGCGAGCGTCGGCAGCAGCGTTGCGCTGGTTCCGGGCAGCGTCAGAGGTGCACGGCGTGTCGGACAGCAGCAGTGGGCGCGAGTTTTTACAGCAGCGGGTCGTGGAGCGGGTTCTTGCTGTGAGCAGCGTCGTGGGCATCGTTTGATGAATTTTTACTGTTAAATTAGTCCGGACAGCAGCAGTTTCCGATCCCGGCACCTATCCATACCCATTAGAGGCTTGATTTACGCAACCCACAACCATTCGAGTTAGGCCTGAGTTACCCACACCTAGACGAAGTCGATTTTTGCGGTAATGAACATTGCAAAATCCCTTAGAATGAATTTAGATGGCTGGAAAGTTTGTATTAATTCATTGTCTATTGTTGTTTAGCTGGTGAGTTGACACACGATATAGAAGCATAGTAGTGGGTAAGTAGTCAGGGGGCGAGTGCGTGTGTTACCTTGCGTTAACGGAATGGTTTGGTGCTGATTTTTTTTATGTAGTTGTATGGTGTTGGTGCTGATTTTTAATTAGTTGAATGGATTTTGGTGCTGATTTTTATTTAGTTGTATGGTGTTGGTGCTGATTTTTTCTTAGTTAGTTGAATGGTTTTGACGATGATTTTTAATTGGAATAATTTACTTCGTGCATTAGGAAAATTGTTAGCTGTGGTTGTGCACTCACAGTAATTATCATTGTGTTACGTGTTGTCGTTTCATTGCTAGACATTATGCGAATGCATGATTTCTTGTTGTTGGTTGTGTTTGGTTGGTCCTGATTATTGTAGCTGGAAGTAGCTAAACCATGACGTTGTAAACGTGTCGGAGACGAAATGCATGTGTTGATAGCCTGTCATATAGTTTTATATTATTTTGTTGGAAGCTGTTGAGTTGATGTATTGTTTGGTACGAAGGAGAGCATGCTGGTAAAATTGAGTTGTGAATTGAAATGTGGAAGACATATTTATAGGTTGTCCTTGGAAGGTTAGTGGGGATTGTCACGAGCGACGGGTCGGGTTAGTTGTTTGTTAATTTGTGGGGTGTCTGAACTGAAGATGCTTACTAGTCGTATGGTTATTCAAAGCTATGAGTGGACGCCTTGGGAATAAATGGCAAGGCCGAACATCAGGTTTCAATGGAGGGGTATTGGGGTCTTGGGAATAAATGTCAAAAACCAATACGCCAGGTAGTCATCGGTACCTTGGGAATAAATGTCAAAGACTGGTGCACAGTTCTAGACCTTGGGAATAAATGGCAAGGTCGAACCTCAAGATCTGAAGAAAAGTATTGGGGCATTGGGAATAAATGTCAAGGGCCAGAACGACTCGAGGGGTTAGACTCGGAGGACTGA

mRNA sequence

ATGACTTCTGTATTCGATCGCATCAAGCCTTCAGCTACTCGACCTTCAGTCTTTCAGAGGATGAGTATGGCCACTGCAAAAGAGGAAAGTCAATGTGTTACATACATCCCCACTCGATCTTCAGTATTTCAAAGGCTAAGCATCTCCACGTCAAAGAAAAATCAATCTTTGAAATCTGTTTTTGATTGTCTCAAAACGTCAAACGATCAATACGAAAGAATGATGAAGACCGTGGAAGCAAAATCATCCGATGAAGTGAATGATGAGAAGAAAATCACAGCATTGCGTCATCCCCGAAAGGATGATAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGCCAGACGATATCCCTATATAGGCGTCATCCCCGAAAGAATGGTAGCCGTGAGAGATACTTCACTAAATTAGGTGGCCTTGTTCCACGAAGATGTGTGAACCGGACGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAGTTGTAACGCCTCGCGTTACTCAGTCGTCGGCCACCCCCTCCACTCGGACTCTCCCTCTCCGACACAGCAGCACCGACGGCAGCCATCTCCGGCGAACACAGCGGCAGCAGCGGCGGGCAACGGTGGTGTGCGACGATCAGCGACGGCGCGTGACATTCGGACAGCTGCAGGAGGCATCGATACACGTGGGGCTATGTTCGCGGCGTCCTTTCTCCGATTCAACAAGCCTAACGACCTCGAACAACTTAGATCCGTGAAACCCGGTGGTCATGGAAGGGTTAGTGAAGTGGTGAAGGGTGAAGGGGTCAATACGACTCGAGGAGTTAGGCTTGAGCGATTAAAAAAGAGTGGAGCTTGTGAAGTAGTGGTGTTTGGCCTTGGGAATAAATGGCAAGGTCGGACATCAAGTACTGGAGAAGGAGGAGCGTCAGAGGTGCACGGCGTGTCGGACAGCAGCAGTGGGCGCGAGTTTTTACAGCAGCGGGTCGTGGAGCGGGTTCTTGCTGTAGTCATCGGTACCTTGGGAATAAATGTCAAAGACTGGTGCACAGTTCTAGACCTTGGGAATAAATGGCAAGGTCGAACCTCAAGATCTGAAGAAAAGTATTGGGGCATTGGGAATAAATGTCAAGGGCCAGAACGACTCGAGGGGTTAGACTCGGAGGACTGA

Coding sequence (CDS)

ATGACTTCTGTATTCGATCGCATCAAGCCTTCAGCTACTCGACCTTCAGTCTTTCAGAGGATGAGTATGGCCACTGCAAAAGAGGAAAGTCAATGTGTTACATACATCCCCACTCGATCTTCAGTATTTCAAAGGCTAAGCATCTCCACGTCAAAGAAAAATCAATCTTTGAAATCTGTTTTTGATTGTCTCAAAACGTCAAACGATCAATACGAAAGAATGATGAAGACCGTGGAAGCAAAATCATCCGATGAAGTGAATGATGAGAAGAAAATCACAGCATTGCGTCATCCCCGAAAGGATGATAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGCCAGACGATATCCCTATATAGGCGTCATCCCCGAAAGAATGGTAGCCGTGAGAGATACTTCACTAAATTAGGTGGCCTTGTTCCACGAAGATGTGTGAACCGGACGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAGTTGTAACGCCTCGCGTTACTCAGTCGTCGGCCACCCCCTCCACTCGGACTCTCCCTCTCCGACACAGCAGCACCGACGGCAGCCATCTCCGGCGAACACAGCGGCAGCAGCGGCGGGCAACGGTGGTGTGCGACGATCAGCGACGGCGCGTGACATTCGGACAGCTGCAGGAGGCATCGATACACGTGGGGCTATGTTCGCGGCGTCCTTTCTCCGATTCAACAAGCCTAACGACCTCGAACAACTTAGATCCGTGAAACCCGGTGGTCATGGAAGGGTTAGTGAAGTGGTGAAGGGTGAAGGGGTCAATACGACTCGAGGAGTTAGGCTTGAGCGATTAAAAAAGAGTGGAGCTTGTGAAGTAGTGGTGTTTGGCCTTGGGAATAAATGGCAAGGTCGGACATCAAGTACTGGAGAAGGAGGAGCGTCAGAGGTGCACGGCGTGTCGGACAGCAGCAGTGGGCGCGAGTTTTTACAGCAGCGGGTCGTGGAGCGGGTTCTTGCTGTAGTCATCGGTACCTTGGGAATAAATGTCAAAGACTGGTGCACAGTTCTAGACCTTGGGAATAAATGGCAAGGTCGAACCTCAAGATCTGAAGAAAAGTATTGGGGCATTGGGAATAAATGTCAAGGGCCAGAACGACTCGAGGGGTTAGACTCGGAGGACTGA

Protein sequence

MTSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVFDCLKTSNDQYERMMKTVEAKSSDEVNDEKKITALRHPRKDDSREGYFTKLGGLVPRGCVSQTISLYRRHPRKNGSRERYFTKLGGLVPRRCVNRTISLYRRHPRKDGSCNASRYSVVGHPLHSDSPSPTQQHRRQPSPANTAAAAAGNGGVRRSATARDIRTAAGGIDTRGAMFAASFLRFNKPNDLEQLRSVKPGGHGRVSEVVKGEGVNTTRGVRLERLKKSGACEVVVFGLGNKWQGRTSSTGEGGASEVHGVSDSSSGREFLQQRVVERVLAVVIGTLGINVKDWCTVLDLGNKWQGRTSRSEEKYWGIGNKCQGPERLEGLDSED
Homology
[Close]
BLAST of Moc05g16330 vs. NCBI nr
Match: TYK04576.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-18
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +EE+QC T+I TR+S F+RLSISTSKK++   S F
Sbjct: 332 TSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAF 391

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK  NDQ +R MK+++AK   E ND+ KI
Sbjct: 392 DRLKMKNDQQQREMKSLKAKPFSEENDDDKI 422

[Close]
BLAST of Moc05g16330 vs. NCBI nr
Match: KAA0045440.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-18
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +E++QC T+I TR+S F+RLSISTSKKN+   S F
Sbjct: 663 TSVFDRIKPSTTRSSVFQRLSMATKEEKNQCPTFIYTRTSTFKRLSISTSKKNRPSTSAF 722

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK +NDQ +R MK+++AK   E ND+ KI
Sbjct: 723 DRLKMTNDQQQREMKSLKAKPFREENDDAKI 753

[Close]
BLAST of Moc05g16330 vs. NCBI nr
Match: TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-18
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +EE+QC T+I TR+S F+RLSIS SKKN+   S F
Sbjct: 686 TSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISASKKNRPSTSAF 745

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK +NDQ +R MK+++AK   E ND+ KI
Sbjct: 746 DRLKMTNDQQQREMKSLKAKPFREENDDDKI 776

[Close]
BLAST of Moc05g16330 vs. NCBI nr
Match: TYK28989.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-18
Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = 0 

Query: 1   MTSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSV 60
           MTSVFDRIKPS TR S FQR+SMA  +EE+QC+T+I TR+S F+RLSISTSKK++  +S 
Sbjct: 331 MTSVFDRIKPSTTRSSAFQRLSMAMKEEENQCLTFIYTRTSAFKRLSISTSKKDRPSRSA 390

Query: 61  FDCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           FD LK +NDQ +R MK+++AK   E ND+ KI
Sbjct: 391 FDRLKMTNDQQQREMKSLKAKPFCEKNDDDKI 422

[Close]
BLAST of Moc05g16330 vs. NCBI nr
Match: KAA0041559.1 (hypothetical protein E6C27_scaffold93G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-18
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVF RIKPS TR SVFQR+SMAT +EE+QC T+I TR+S F+RLSISTSKKN+   S F
Sbjct: 73  TSVFHRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISTSKKNRPSTSAF 132

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK  NDQ +R MK+++AK   E ND+ KI
Sbjct: 133 DRLKMKNDQQQREMKSLKAKPFREENDDDKI 163

[Close]
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match: A0A5D3C2C8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002110 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.0e-19
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +EE+QC T+I TR+S F+RLSISTSKK++   S F
Sbjct: 332 TSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAF 391

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK  NDQ +R MK+++AK   E ND+ KI
Sbjct: 392 DRLKMKNDQQQREMKSLKAKPFSEENDDDKI 422

[Close]
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match: A0A5A7TQK6 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00400 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.0e-19
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +E++QC T+I TR+S F+RLSISTSKKN+   S F
Sbjct: 663 TSVFDRIKPSTTRSSVFQRLSMATKEEKNQCPTFIYTRTSTFKRLSISTSKKNRPSTSAF 722

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK +NDQ +R MK+++AK   E ND+ KI
Sbjct: 723 DRLKMTNDQQQREMKSLKAKPFREENDDAKI 753

[Close]
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match: A0A5D3BX77 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00570 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.6e-19
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +EE+QC T+I TR+S F+RLSIS SKKN+   S F
Sbjct: 686 TSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISASKKNRPSTSAF 745

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK +NDQ +R MK+++AK   E ND+ KI
Sbjct: 746 DRLKMTNDQQQREMKSLKAKPFREENDDDKI 776

[Close]
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match: A0A5D3DZZ8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00890 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.6e-19
Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = 0 

Query: 1   MTSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSV 60
           MTSVFDRIKPS TR S FQR+SMA  +EE+QC+T+I TR+S F+RLSISTSKK++  +S 
Sbjct: 331 MTSVFDRIKPSTTRSSAFQRLSMAMKEEENQCLTFIYTRTSAFKRLSISTSKKDRPSRSA 390

Query: 61  FDCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           FD LK +NDQ +R MK+++AK   E ND+ KI
Sbjct: 391 FDRLKMTNDQQQREMKSLKAKPFCEKNDDDKI 422

[Close]
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match: A0A5D3CUI5 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2047G00200 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-18
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 2   TSVFDRIKPSATRPSVFQRMSMATAKEESQCVTYIPTRSSVFQRLSISTSKKNQSLKSVF 61
           TSVFDRIKPS TR SVFQR+SMAT +EE+QC T+I TR+S F+RLSISTSKK++   S F
Sbjct: 73  TSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAF 132

Query: 62  DCLKTSNDQYERMMKTVEAKSSDEVNDEKKI 93
           D LK +NDQ +R MK+ +AK   E ND+ KI
Sbjct: 133 DRLKMTNDQQQREMKSSKAKPFREENDDDKI 163

The following BLAST results are available for this feature:
BLAST of Moc05g16330 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK04576.11.0e-1863.74retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0045440.11.0e-1863.74retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK03695.11.4e-1863.74retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK28989.11.8e-1861.96retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0041559.13.0e-1863.74hypothetical protein E6C27_scaffold93G00150 [Cucumis melo var. makuwa][more]
BLAST of Moc05g16330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C2C85.0e-1963.74Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7TQK65.0e-1963.74Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3BX776.6e-1963.74Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3DZZ88.6e-1961.96Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3CUI51.5e-1863.74Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of Moc05g16330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g16330.1Moc05g16330.1mRNA