Moc05g16040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g16040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr5: 12079937 .. 12081862 (+)
RNA-Seq Expression	Moc05g16040
Synteny	Moc05g16040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACACTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATCGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACATTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTCGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAAGCCAAGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTGGAACACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCATAAAGGAAAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGCGGAGGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTTCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCCGCCAGTTCTGGGTCAAAGGGGACCTATTATTTACAAGAGGAAACAGACTGTACGTGCCAAGAACGGGAGACCTGAGAAAGAAGCTCCTACATGAGTGTCACGATACTCTATGGGCTAGTCACCCGAGGTGGCAACGGACTTACGCCTTGCTGAAAAAGGGGTACTTTTGGCCAAGTATGCGGGAAGATGTGATGCAATACACGAAGACCTGTCTTATCTGTCAGCAAGATAAGGTAGAAAGGACTAAAATAGCAGGGTTGCTTGAACCCCTACCAACTCCTACGAGACCATGGGAGAGTGTGTCGCTCGACTTCATCTCTCACTTGCCCAAGGTAGGAGAATATGAAGCCATTCTTGTCGTTATCGATCGATTTTCCAAATATGCAACTTTCATTCCGACTCCCAAGACGTGTTCCGCCGAGCTGACGGCGCAGTTGTTCTTTAAACATATAGTAAAACTATGGGGAGTTCCGACGAGCATCGTTAGCGACAGGGATGGCCGATTTACAGGAACCTTCTGGACGGAACTTTTTTCTATTATGGGTTCAAGCTTGAACATTTCCTCGAGTTATCACCCACAGACCGATGGTCAGACAGAGAGATTCAACAGCATGCTTGAGGAATACCTGCGTCACTTCATCGATGCCAGACAAAAGAACTGGGTCCAGCTGTTAGATGTGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAAGAAAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGTAGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCTAAGCATATGAAGACATGGGCCGACCGCAAGAGACGCCCTCTCGAATTGCGAGTAGGCGACAAAGTTCTTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTTGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCCGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGTTGTTGTGCGGCCCACCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCAAATGGAAAGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

mRNA sequence

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACACTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATCGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACATTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTCGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAAGCCAAGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTGGAACACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCATAAAGGAAAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGCGGAGGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTTCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCCGCCAGTTCTGGGTCAAAGGGGACCTATTATTTACAAGAGGAAACAGACTGTACGTGCCAAGAACGGGAGACCTGAGAAAGAAGCTCCTACATGAGTGTCACGATACTCTATGGGCTAGTCACCCGAGACAAAAGAACTGGGTCCAGCTGTTAGATGTGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAAGAAAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGTAGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCTAAGCATATGAAGACATGGGCCGACCGCAAGAGACGCCCTCTCGAATTGCGAGTAGGCGACAAAGTTCTTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTTGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCCGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGTTGTTGTGCGGCCCACCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCAAATGGAAAGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

Coding sequence (CDS)

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACACTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATCGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACATTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTCGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAAGCCAAGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTGGAACACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCATAAAGGAAAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGCGGAGGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTTCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCCGCCAGTTCTGGGTCAAAGGGGACCTATTATTTACAAGAGGAAACAGACTGTACGTGCCAAGAACGGGAGACCTGAGAAAGAAGCTCCTACATGAGTGTCACGATACTCTATGGGCTAGTCACCCGAGACAAAAGAACTGGGTCCAGCTGTTAGATGTGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAAGAAAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGTAGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCTAAGCATATGAAGACATGGGCCGACCGCAAGAGACGCCCTCTCGAATTGCGAGTAGGCGACAAAGTTCTTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTTGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCCGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGTTGTTGTGCGGCCCACCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCAAATGGAAAGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

Protein sequence

MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEMLAVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGKSNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQFWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHPRQKNWVQLLDVAQFCFNGQTSSSTRKSPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRKRRPLELRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNVVVRPTIDFKRKEDKEAEEILAERTRKVGRPVRKVREFLVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

Homology

[Close]

BLAST of Moc05g16040 vs. NCBI nr
Match: KAA0036830.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 682.9 bits (1761), Expect = 1.9e-192
Identity = 363/641 (56.63%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GSIRD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSIRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVTVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 682.6 bits (1760), Expect = 2.5e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 943  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1002

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1003 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1062

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1063 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1122

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1123 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1182

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1183 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1242

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1243 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1302

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1303 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1362

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1363 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1422

[Close]

BLAST of Moc05g16040 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 682.6 bits (1760), Expect = 2.5e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. NCBI nr
Match: TYK28713.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 682.6 bits (1760), Expect = 2.5e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. NCBI nr
Match: KAA0053339.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 682.6 bits (1760), Expect = 2.5e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.7e-24
Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 5   PVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEMLAVVH 64
           P+L + D TK F + TDASD  LG VL QDGHP++Y SR LN  E +Y+  EKE+LA+V 
Sbjct: 498 PILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVW 557

Query: 65  CLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGKSNQA 124
             ++ R YLLG +F + +D+  +   +      SK  +W+  L+EFDF +++  GK N  
Sbjct: 558 ATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCV 617

Query: 125 ADALS 130
           ADALS
Sbjct: 618 ADALS 622

[Close]

BLAST of Moc05g16040 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-22
Identity = 53/129 (41.09%), Postives = 83/129 (64.34%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
           +++ P+L L D  K F + TDAS+  LG VL Q+GHPI++ SR LN+ E +Y+  EKE+L
Sbjct: 493 IIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELL 552

Query: 61  AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
           A+V   ++ R YLLG  F++ +D+  +    N  +  +K  +W+  L+E+ FK+++  GK
Sbjct: 553 AIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGK 612

Query: 121 SNQAADALS 130
            N  ADALS
Sbjct: 613 ENSVADALS 621

[Close]

BLAST of Moc05g16040 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-17
Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 6   VLGLADVTKPFEVETDASDYTLGGVLLQD----GHPIAYESRKLNNAERHYTVSEKEMLA 65
           +L     TKPF + TDAS++ +G VL QD      PIAY SR LN  E +Y   EKEMLA
Sbjct: 425 ILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLA 484

Query: 66  VVHCLRSSRQYLLGSYFV-VKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 125
           ++  L + R YL G+  + V TD+  +          +K  +W+  + E++ +L +K GK
Sbjct: 485 IIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGK 544

Query: 126 SNQAADALS 130
           SN  ADALS
Sbjct: 545 SNVVADALS 553

[Close]

BLAST of Moc05g16040 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-15
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDG-----HPIAYESRKLNNAERHYTVS 60
           ++  PVL   D +K   +ETDASD  +G VL Q       +P+ Y S K++ A+ +Y+VS
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  EKEMLAVVHCLRSSRQYLLGSY--FVVKTDN-SAICHFFNQPKLTSKQ-AKWQELLAEFD 120
           +KEMLA++  L+  R YL  +   F + TD+ + I    N+ +  +K+ A+WQ  L +F+
Sbjct: 753 DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFN 812

Query: 121 FKLEHKAGKSNQAADALS 130
           F++ ++ G +N  ADALS
Sbjct: 813 FEINYRPGSANHIADALS 830

[Close]

BLAST of Moc05g16040 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-15
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDG-----HPIAYESRKLNNAERHYTVS 60
           ++  PVL   D +K   +ETDASD  +G VL Q       +P+ Y S K++ A+ +Y+VS
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  EKEMLAVVHCLRSSRQYLLGSY--FVVKTDN-SAICHFFNQPKLTSKQ-AKWQELLAEFD 120
           +KEMLA++  L+  R YL  +   F + TD+ + I    N+ +  +K+ A+WQ  L +F+
Sbjct: 753 DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFN 812

Query: 121 FKLEHKAGKSNQAADALS 130
           F++ ++ G +N  ADALS
Sbjct: 813 FEINYRPGSANHIADALS 830

[Close]

BLAST of Moc05g16040 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 9.1e-193
Identity = 363/641 (56.63%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GSIRD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSIRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVTVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. ExPASy TrEMBL
Match: A0A5D3BYE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00260 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc05g16040 vs. ExPASy TrEMBL
Match: A0A5D3DY93 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00300 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 362/641 (56.47%), Postives = 409/641 (63.81%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYTLGGVLLQDGHPIAYESRKLNNAERHYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDY LGGVLLQ+GHPIAYESRKLN AER YTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSSRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQAKWQELLAEFDFKLEHKAGK 120
            AVVHCLR+ RQYLLGS FVVKTDNSA CHFF QPKLTSKQA+WQE LAEFDF+ EHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSHKGKHAALCMLAHIHTSKAEGSIRDLIREYLQRDPFARTVVELAKTGKTRQ 180
            SNQAADALS K +HAA+C+LAH+  S+  GS+RD +RE+LQ+D  A+ V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVKGDLLFTRGNRLYVPRTGDLRKKLLHECHDTLWASHP-------------------- 240
            FWV+ DLL T+GNRLYVPR G LRKKLL+ECHDTLWA HP                    
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  ----------------------------------RQKNWVQLLDVAQFCFNGQTSSSTRK 420
                                              RQKNWVQLLDVAQFCFN QTSSST +
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKTWADRK 468
            SPFEIV GRQP +PH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MK WAD+K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

The following BLAST results are available for this feature:

BLAST of Moc05g16040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036830.1	1.9e-192	56.63	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	2.5e-192	56.47	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	2.5e-192	56.47	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
TYK28713.1	2.5e-192	56.47	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053339.1	2.5e-192	56.47	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc05g16040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	2.7e-24	44.80	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.5e-22	41.09	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	2.4e-17	40.31	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q9UR07	3.9e-15	36.96	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.9e-15	36.96	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Moc05g16040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0E2	9.1e-193	56.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]
A0A5D3C4R1	1.2e-192	56.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	1.2e-192	56.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5D3BYE6	1.2e-192	56.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3DY93	1.2e-192	56.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold40...	[more]

BLAST of Moc05g16040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 402..461 e-value: 7.9E-9 score: 45.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 403..467 score: 13.100501
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 404..457 e-value: 6.1E-11 score: 42.1
None	No IPR available	GENE3D	3.10.20.370		coord: 11..82 e-value: 1.9E-9 score: 39.4
None	No IPR available	GENE3D	2.40.50.40		coord: 398..464 e-value: 3.0E-11 score: 44.8
None	No IPR available	PANTHER	PTHR47266	FAMILY NOT NAMED	coord: 221..450
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 17..129 e-value: 2.86777E-50 score: 164.973
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 11..110 e-value: 1.9E-30 score: 105.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 196..299 e-value: 1.4E-5 score: 26.5
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 364..459
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g16040.1	Moc05g16040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034645	cellular macromolecule biosynthetic process
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity