Moc05g15460 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g15460
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 11722598 .. 11723216 (-)
RNA-Seq Expression	Moc05g15460
Synteny	Moc05g15460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAAAGGCTAAGTGTACATGCCGAAGTCCGATCTGATGGAGGTCCGACCTACTCGGAGCCTGACAGGTCCGATATGGGAAAAAAAACATGTAACCGTCGGTCGTGAGTATTGTCGGATCTCCCACCTATAAATAGAGGGCCTCATTTCACGCTCAAGTATCGAATCTCACCTCGAACTAAATACGGAGTCCGACCTATACTGACTTGAGCGTCGGAGTGTTTAACCTCTTGTGCAGGTCCACTTTTGTGTTCAGGTCGAGCCGGGGACCGGGTTTGAGCTAGGTTCGTAAAGTGTCGTTGTGCAGACCTTTGCATAAATATTTGGCGCCGTCTGTGGGAAAGGACGATCTAAGTCATCCCGATTTATAAGCGTGAACAAAAATGGTTCAGCCAACAAACTCAACCACACGACCGACCGAAGAGCTCTAGCGGCCAATGATGGCCACCAGAGGGAGGTCGGGGCAGAGGTGGTAGAGGGGCAGGTTCATGAAGGCCTGGGGACAGAACCCCTCCGCAGGTCGGCAGGCATCACCACGCCCGTTCTGCCACCAACACATCCAAAGCCATCCAAGGCCAATCGCGGCCGAGGTGGGGCTTCGAAGACAACCACTTGA

mRNA sequence

ATGGGGAAAAGGCTAAGTGTACATGCCGAAGTCCGATCTGATGGAGGTCCGACCTACTCGGAGCCTGACAGGTCCACTTTTGTGTTCAGGTCGAGCCGGGGACCGGCCAACAAACTCAACCACACGACCGACCGAAGAGCTCTAGCGGCCAATGATGGCCACCAGAGGGAGGTCGGGGCAGAGGTGGTAGAGGGGCAGGTTCATGAAGGCCTGGGGACAGAACCCCTCCGCAGGTCGGCAGGCATCACCACGCCCGTTCTGCCACCAACACATCCAAAGCCATCCAAGGCCAATCGCGGCCGAGGTGGGGCTTCGAAGACAACCACTTGA

Coding sequence (CDS)

ATGGGGAAAAGGCTAAGTGTACATGCCGAAGTCCGATCTGATGGAGGTCCGACCTACTCGGAGCCTGACAGGTCCACTTTTGTGTTCAGGTCGAGCCGGGGACCGGCCAACAAACTCAACCACACGACCGACCGAAGAGCTCTAGCGGCCAATGATGGCCACCAGAGGGAGGTCGGGGCAGAGGTGGTAGAGGGGCAGGTTCATGAAGGCCTGGGGACAGAACCCCTCCGCAGGTCGGCAGGCATCACCACGCCCGTTCTGCCACCAACACATCCAAAGCCATCCAAGGCCAATCGCGGCCGAGGTGGGGCTTCGAAGACAACCACTTGA

Protein sequence

MGKRLSVHAEVRSDGGPTYSEPDRSTFVFRSSRGPANKLNHTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKPSKANRGRGGASKTTT

Homology

[Close]

BLAST of Moc05g15460 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-21
Identity = 56/69 (81.16%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 41  HTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKPSKANRG 100
           +T DRRAL ANDGHQREVGAEVVEGQ+HEGLGTEP  RSA ITTP L P HPKP KANRG
Sbjct: 9   NTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHPKPFKANRG 68

Query: 101 RGGASKTTT 110
           RGGAS+ TT
Sbjct: 69  RGGASRRTT 77

[Close]

BLAST of Moc05g15460 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 35 PANKLNHTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKP 94
          PAN  N T DRRALAAN GHQREVGAEVVEGQ HE LGTEPL RSA ITTPVLPP HPKP
Sbjct: 4  PANSTN-TADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHPKP 63

Query: 95 SKA 98
          SKA
Sbjct: 64 SKA 65

[Close]

BLAST of Moc05g15460 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 58.9 bits (141), Expect = 3.1e-05
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 41  HTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKPSKANRG 100
           +T +RRAL  N+  Q E+ A+V E Q   G   +P RRS      +LPP HP+  KANRG
Sbjct: 9   NTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHPRSGKANRG 68

Query: 101 RGGAS 106
           RGG +
Sbjct: 69  RGGGT 73

[Close]

BLAST of Moc05g15460 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.6e-21
Identity = 56/69 (81.16%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 41  HTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKPSKANRG 100
           +T DRRAL ANDGHQREVGAEVVEGQ+HEGLGTEP  RSA ITTP L P HPKP KANRG
Sbjct: 9   NTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHPKPFKANRG 68

Query: 101 RGGASKTTT 110
           RGGAS+ TT
Sbjct: 69  RGGASRRTT 77

[Close]

BLAST of Moc05g15460 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 7.7e-18
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 35 PANKLNHTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKP 94
          PAN  N T DRRALAAN GHQREVGAEVVEGQ HE LGTEPL RSA ITTPVLPP HPKP
Sbjct: 4  PANSTN-TADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHPKP 63

Query: 95 SKA 98
          SKA
Sbjct: 64 SKA 65

[Close]

BLAST of Moc05g15460 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 41  HTTDRRALAANDGHQREVGAEVVEGQVHEGLGTEPLRRSAGITTPVLPPTHPKPSKANRG 100
           +T +RRAL  N+  Q E+ A+V E Q   G   +P RRS      +LPP HP+  KANRG
Sbjct: 9   NTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHPRSGKANRG 68

Query: 101 RGGAS 106
           RGG +
Sbjct: 69  RGGGT 73

The following BLAST results are available for this feature:

BLAST of Moc05g15460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	5.3e-21	81.16	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022152854.1	1.6e-17	84.13	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022156638.1	3.1e-05	46.15	uncharacterized protein LOC111023488 [Momordica charantia]	[more]

BLAST of Moc05g15460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g15460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	2.6e-21	81.16	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DHB3	7.7e-18	84.13	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DR60	1.5e-05	46.15	uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc05g15460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g15460.1	Moc05g15460.1	mRNA