Moc05g14610 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g14610
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr5: 11050251 .. 11051652 (+)
RNA-Seq Expression	Moc05g14610
Synteny	Moc05g14610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAGCCAGCAAACTCTGCTAATACTACAGAACGGAGGGGTTTGAACGCTGATAACGGCCCTCAGCGAAATATTGATGCTATAATGGTCGAGGACCAGACTCGAGCAGGGCAAGAGGGAGATCTTCCATGGAGATCGGCCCGCCATGCGAACCAGAAGTTACCCCCTGCTCACCCTAAGCCAATCGAGGCTGAGGAGGGACCTCAAGAAAGGCCTCCCGAAGGGCTGACCCGACGGCAGACCCTGAGGCTTTGTCTACTTTCTAGCGCGAGTTGGATGATATGCGTCATCGGTTGCACACAATGGAAGAAATGTACGCCGAGGCGACGCGGGTTAACCGGACAGCGTCCCCCTCTAGGGTCCTAGACGCACCCGGAGAGAAGGAAGGCCGGGTTCCATCTCTCTACCCTGGCGACCGCGAGCCCGTTCCCAACAATGAGGGGGTGGATTATAGCTTGCGGGACAACGATCTTAGAAAGCACCTCACTGATAAGAAGAAGAGAGCATCTCGGGAGCCGGAAGACTCTTCGTCCTTCTCCCGAGAGTTCTCCAACTCTGACCTCAAGGCTGAATCCAAGTATAAGTCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCGACCTGATGAAACACAGGTTCGACGAGCAGGTCGAGGCGCTCAAAGCCAGGTGCGAGAAGAAAGAGAATTCTTTTGACGATGGCGACCTGGGAGAATCGCCATTCACCCCGGACATCATGGAGGCTCCAATTCCTCCAAAGTTCAAGACTCCCACCATGAAGCCTTATGATGGGTCTAAAGACCCAAAGGACTATGTTGTGGTCTTCGAAGGCCTATGGACTTTCAAGCGGCAACAGACGCAATCAAGTGCCGCGCCTTCCAGATCGCACTCACCGGCAGCGCGCGCTTGTGGTATCGAAGATTGCCGGCTAGATTGATCTCGACTTACGCCCAGCTGAGGAAAGAATTCATTAGTCAATTCTCTTCTCGGCATTACGATAGAAAGACAGCGACTCACCTCGTCACCATTAGGCAGAAGGAGGGTGAGACGCTGAGAGAGTATGTCACAAGGTTCCAGGAGGAGCAGCTGAAAGTCGCACACTGCTCCGATGACTCGGCCATGTGCTACTTTCTCACCTGCCTTGCCGATGAAACCCTCACTGTGAAGCTCGGAGAAGAGGCCTTAACCACTTTTGTCGAAGTCCTACAAAAGGCGAAGAAGGTTATTGATGGGCAAGAGCTCCTCCGAACCAAAACTGGCAGATCAGAAAAGAAGGTCGACCAGGGGAGAGCTGGCCAGGAGAAGAGAAAGACTGATTCCAAGACAAAGGACAAGGGATCGACCGTCTCCAGCAGCCGGGCTGAGTATCGTAGAACGGACAGTGACCCCAATTGA

mRNA sequence

ATGGTGCAGCCAGCAAACTCTGCTAATACTACAGAACGGAGGGGTTTGAACGCTGATAACGGCCCTCAGCGAAATATTGATGCTATAATGGTCGAGGACCAGACTCGAGCAGGGCAAGAGGGAGATCTTCCATGGAGATCGGCCCGCCATGCGAACCAGAAGTTACCCCCTGCTCACCCTAAGCCAATCGAGGCTGAGGAGGGACCTCAAGAAAGGCCTCCCGAAGGGCTGACCCGACGGCAGACCCTGAGGCTTTGTCTACTTTCTAGCGCGAGTTGGATGATATGCGTCATCGACGCACCCGGAGAGAAGGAAGGCCGGGTTCCATCTCTCTACCCTGGCGACCGCGAGCCCGTTCCCAACAATGAGGGGGTGGATTATAGCTTGCGGGACAACGATCTTAGAAAGCACCTCACTGATAAGAAGAAGAGAGCATCTCGGGAGCCGGAAGACTCTTCGTCCTTCTCCCGAGAGTTCTCCAACTCTGACCTCAAGGCTGAATCCAAGTATAAGTCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCGACCTGATGAAACACAGGTTCGACGAGCAGGTCGAGGCGCTCAAAGCCAGGTGCGAGAAGAAAGAGAATTCTTTTGACGATGGCGACCTGGGAGAATCGCCATTCACCCCGGACATCATGGAGGCTCCAATTCCTCCAAAGTTCAAGACTCCCACCATGAAGCCTTATGATGGGTCTAAAGACCCAAAGGACTATGTTGTGGTCTTCGAAGGCCTATGGACTTTCAAGCGGCAACAGACGCAATCAAGTGCCGCGCCTTCCAGATCGCACTCACCGGCAGCGCGCGCTTGTGCGACTCACCTCGTCACCATTAGGCAGAAGGAGGGTGAGACGCTGAGAGAGTATGTCACAAGGTTCCAGGAGGAGCAGCTGAAAGTCGCACACTGCTCCGATGACTCGGCCATGTGCTACTTTCTCACCTGCCTTGCCGATGAAACCCTCACTGTGAAGCTCGGAGAAGAGGCCTTAACCACTTTTGTCGAAGTCCTACAAAAGGCGAAGAAGGTTATTGATGGGCAAGAGCTCCTCCGAACCAAAACTGGCAGATCAGAAAAGAAGGTCGACCAGGGGAGAGCTGGCCAGGAGAAGAGAAAGACTGATTCCAAGACAAAGGACAAGGGATCGACCGTCTCCAGCAGCCGGGCTGAGTATCGTAGAACGGACAGTGACCCCAATTGA

Coding sequence (CDS)

ATGGTGCAGCCAGCAAACTCTGCTAATACTACAGAACGGAGGGGTTTGAACGCTGATAACGGCCCTCAGCGAAATATTGATGCTATAATGGTCGAGGACCAGACTCGAGCAGGGCAAGAGGGAGATCTTCCATGGAGATCGGCCCGCCATGCGAACCAGAAGTTACCCCCTGCTCACCCTAAGCCAATCGAGGCTGAGGAGGGACCTCAAGAAAGGCCTCCCGAAGGGCTGACCCGACGGCAGACCCTGAGGCTTTGTCTACTTTCTAGCGCGAGTTGGATGATATGCGTCATCGACGCACCCGGAGAGAAGGAAGGCCGGGTTCCATCTCTCTACCCTGGCGACCGCGAGCCCGTTCCCAACAATGAGGGGGTGGATTATAGCTTGCGGGACAACGATCTTAGAAAGCACCTCACTGATAAGAAGAAGAGAGCATCTCGGGAGCCGGAAGACTCTTCGTCCTTCTCCCGAGAGTTCTCCAACTCTGACCTCAAGGCTGAATCCAAGTATAAGTCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCGACCTGATGAAACACAGGTTCGACGAGCAGGTCGAGGCGCTCAAAGCCAGGTGCGAGAAGAAAGAGAATTCTTTTGACGATGGCGACCTGGGAGAATCGCCATTCACCCCGGACATCATGGAGGCTCCAATTCCTCCAAAGTTCAAGACTCCCACCATGAAGCCTTATGATGGGTCTAAAGACCCAAAGGACTATGTTGTGGTCTTCGAAGGCCTATGGACTTTCAAGCGGCAACAGACGCAATCAAGTGCCGCGCCTTCCAGATCGCACTCACCGGCAGCGCGCGCTTGTGCGACTCACCTCGTCACCATTAGGCAGAAGGAGGGTGAGACGCTGAGAGAGTATGTCACAAGGTTCCAGGAGGAGCAGCTGAAAGTCGCACACTGCTCCGATGACTCGGCCATGTGCTACTTTCTCACCTGCCTTGCCGATGAAACCCTCACTGTGAAGCTCGGAGAAGAGGCCTTAACCACTTTTGTCGAAGTCCTACAAAAGGCGAAGAAGGTTATTGATGGGCAAGAGCTCCTCCGAACCAAAACTGGCAGATCAGAAAAGAAGGTCGACCAGGGGAGAGCTGGCCAGGAGAAGAGAAAGACTGATTCCAAGACAAAGGACAAGGGATCGACCGTCTCCAGCAGCCGGGCTGAGTATCGTAGAACGGACAGTGACCCCAATTGA

Protein sequence

MVQPANSANTTERRGLNADNGPQRNIDAIMVEDQTRAGQEGDLPWRSARHANQKLPPAHPKPIEAEEGPQERPPEGLTRRQTLRLCLLSSASWMICVIDAPGEKEGRVPSLYPGDREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLTPEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKTPTMKPYDGSKDPKDYVVVFEGLWTFKRQQTQSSAAPSRSHSPAARACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLADETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKTKDKGSTVSSSRAEYRRTDSDPN

Homology

[Close]

BLAST of Moc05g14610 vs. NCBI nr
Match: XP_022155139.1 (uncharacterized protein LOC111022280 [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 2.5e-92
Identity = 203/316 (64.24%), Postives = 230/316 (72.78%), Query Frame = 0


Query: 100 APGEKEGRVPSLYPGDREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREF 159
           APGEK    PS+ PG+REP+PN+EGVDYSLRDNDLRKHLTDKKK+AS EPEDS S+SREF
Sbjct: 7   APGEK--GAPSIQPGNREPIPNDEGVDYSLRDNDLRKHLTDKKKKASWEPEDSLSYSREF 66

Query: 160 SNSDLKAESKYKSLTPEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPF 219
           SNS+LKA+SKYK L PEAVI REEFDLMKHRFDEQVEALKARCEKKE+ FDD DLGESPF
Sbjct: 67  SNSNLKAQSKYKPLIPEAVINREEFDLMKHRFDEQVEALKARCEKKESPFDDDDLGESPF 126

Query: 220 TPDIMEAPIPPKFKTPTMKPYDGSKDPKDYVVVFEGLWTFKRQQTQ------SSAAPSRS 279
           T DIMEAPIPPKFKTPTMKPYDGSKDPKDYV VFEGL  F+             A    +
Sbjct: 127 TSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCLAFQIALTGSA 186

Query: 280 HSPAARACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLADETLTV 339
                R  A  + T  Q   E + ++  R  + +    H +        +    DETLTV
Sbjct: 187 RLWCRRLPARSISTYSQLRKEFIGQFSFRHYDRK-TATHLAT-------IRQKEDETLTV 246

Query: 340 KLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKTKDKGST 399
           KLGEEA  TF EVLQ AKKVIDGQELLRTKT R EK++DQ R  Q+KRK DSK+KDKGS+
Sbjct: 247 KLGEEAPATFAEVLQNAKKVIDGQELLRTKTDRPEKQIDQKRLSQKKRKDDSKSKDKGSS 306

Query: 400 VSSSRAEYRRTDSDPN 410
            S SR EYRR++S P+
Sbjct: 307 SSGSRTEYRRSESGPS 312

[Close]

BLAST of Moc05g14610 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 342.0 bits (876), Expect = 6.9e-90
Identity = 231/448 (51.56%), Postives = 274/448 (61.16%), Query Frame = 0


Query: 1   MVQPANSANTTERRGLNADNGPQRNIDAIMVEDQTRAGQEGDLPWRSARHANQKLPPAHP 60
           MVQP +S NT +RR L A++G QR + A +VE Q   G   +   RSAR     L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  KPIEAEEGPQERPPEGLTRRQTLRLCLLSSASWMICV---IDAPGEKEGRVPSLYPGDRE 120
           KP +A  G       G +RR TL      S      +   ++A   +   +  +Y    +
Sbjct: 61  KPFKANRG-----RGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQ 120

Query: 121 PV-PNNEGVDYSLRD--NDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLT 180
            V   +   D + RD   DLR HL+ K+  + R+     S S    NS+ +AES Y  + 
Sbjct: 121 AVGAGSRSEDRAARDERGDLRDHLSRKRSSSLRK---GRSPSCSHKNSNQQAESSYNPVV 180

Query: 181 PEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKT 240
           PE VITREEFD +K +FD QVE LKARCE K ++FDDGDLGESPFT DI+EA IP KFKT
Sbjct: 181 PEGVITREEFDQLKSKFDAQVETLKARCEVKGSTFDDGDLGESPFTSDILEALIPSKFKT 240

Query: 241 PTMKPYDGSKDPKDYVVVFEGLWTFKR----------QQTQSSAA-------PSRSHSPA 300
           PTMKPYDGSKDPKDYV VFEGL  F+           Q   +S+A       P+RS S  
Sbjct: 241 PTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIKYRAFQIALTSSARLWYRRLPARSISTY 300

Query: 301 A----------------RACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCY 360
           +                R  ATHL TIRQKE ETLREYVT FQEEQLKVAH SDDSA+CY
Sbjct: 301 SQLRKEFNSQFSSRHYERKTATHLATIRQKERETLREYVTWFQEEQLKVAHYSDDSALCY 360

Query: 361 FLTCLADETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKR 410
           FLT L DETLTVKLGEEA  TF EVLQKAKKVIDGQEL RTKTGRSEK++DQ +  QEKR
Sbjct: 361 FLTDLVDETLTVKLGEEAPATFAEVLQKAKKVIDGQELFRTKTGRSEKQIDQKKPSQEKR 420

[Close]

BLAST of Moc05g14610 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 333.2 bits (853), Expect = 3.2e-87
Identity = 201/335 (60.00%), Postives = 231/335 (68.96%), Query Frame = 0


Query: 105 EGRVPSLYPGDREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDL 164
           E R   L P  +      E  +Y+ +  DLR+HL  K+  + R+ +  S   R   NS+ 
Sbjct: 36  EQRGHHLGPVKKGHPEGGEDEEYTHQRGDLREHLNRKRSSSLRKGQSPSCSHR---NSNQ 95

Query: 165 KAESKYKSLTPEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIM 224
           +AES Y  +TPE VITREEFD +K +FD QVEALKA+CEKKE+SFDDGDLGESPFT DI+
Sbjct: 96  QAESSYNPITPEGVITREEFDQLKSKFDAQVEALKAKCEKKESSFDDGDLGESPFTSDIL 155

Query: 225 EAPIPPKFKTPTMKPYDGSKDPKDYVVVFEGLWTFKR----------QQTQSSAA----- 284
           EA IP KFKTPTMKPYDGSKDPKDYV VFEGL  F+           Q   + +A     
Sbjct: 156 EALIPLKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRDFQIALTGSARLWYR 215

Query: 285 --PSRSHSPAA----------------RACATHLVTIRQKEGETLREYVTRFQEEQLKVA 344
             P+RS S  +                R  ATHL TIRQKEGETLREYVTRFQEEQLKVA
Sbjct: 216 RLPARSISTYSQLRKEFIIQFSSRHYDRKTATHLTTIRQKEGETLREYVTRFQEEQLKVA 275

Query: 345 HCSDDSAMCYFLTCLADETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKV 404
           HCSD SAMCYFLT LADETLTVKL EEA  TFVEVLQKAKK+IDGQELLRTKT R EKK+
Sbjct: 276 HCSDHSAMCYFLTTLADETLTVKLEEEAPATFVEVLQKAKKIIDGQELLRTKTDRPEKKI 335

Query: 405 DQGRAGQEKRKTDSKTKDKGSTVSSSRAEYRRTDS 407
           DQGRA ++K KTDSKT+DKG +  SSR  YRR+D+
Sbjct: 336 DQGRASKDKGKTDSKTRDKGPSSFSSRVNYRRSDN 367

[Close]

BLAST of Moc05g14610 vs. NCBI nr
Match: XP_022155128.1 (uncharacterized protein LOC111022267 [Momordica charantia])

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-86
Identity = 196/320 (61.25%), Postives = 230/320 (71.88%), Query Frame = 0


Query: 123 EGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLTPEAVITRE 182
           E  +Y+ +  DLR+HL  K+  + R+ +  SS  R   NS+ +AES Y  +TP+ VITRE
Sbjct: 33  EDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHR---NSNQQAESSYNPITPKRVITRE 92

Query: 183 EFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKTPTMKPYDG 242
           EFD +K +FD QVEALKA CEKKE+SFDDGDLGE PFT DI+EAPI PKFKTPTMKPYDG
Sbjct: 93  EFDQLKSKFDAQVEALKANCEKKESSFDDGDLGELPFTLDILEAPIHPKFKTPTMKPYDG 152

Query: 243 SKDPKDYVVVFEGLWTFKR----------QQTQSSAA-------PSRSHSPAA------- 302
           SK+PKDYV VFEGL  F+           Q   + +A       P+RS S  +       
Sbjct: 153 SKNPKDYVKVFEGLMNFQAATDAIKCRAFQIAFTGSARLWYRRLPARSISTYSQLRKEFI 212

Query: 303 ---------RACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLADE 362
                    R  ATHL TIRQK+GETLREYVTRFQEEQLKVAHCSDDSAMCYFLT LAD+
Sbjct: 213 SQFSSRYYDRKTATHLATIRQKKGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADK 272

Query: 363 TLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKTKD 410
           TLTVKLGEEA  TF EVLQKAKKVIDGQELLRTKTGR EKK+DQ R G++K K  SK++D
Sbjct: 273 TLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKKIDQRRVGKDKGKAYSKSRD 332

[Close]

BLAST of Moc05g14610 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-81
Identity = 209/442 (47.29%), Postives = 232/442 (52.49%), Query Frame = 0


Query: 1   MVQPANSANTTERRGLNADNGPQRNIDAIMVEDQTRAGQEGDLPWRSARHANQKLPPAHP 60
           MVQPANS NT +RR L A++G QR + A +VE Q       +   RSAR     LPPAHP
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61  KPIEAEEGPQERPPEGLTRRQTLRLCLLSSASWMICVIDAPGEKEGRVPSLYPGDREPVP 120
           KP                                                          
Sbjct: 61  KP---------------------------------------------------------- 120

Query: 121 NNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLTPEAVIT 180
                                                       KAES Y  +TP  VIT
Sbjct: 121 -------------------------------------------SKAESSYNPITP-GVIT 180

Query: 181 REEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKTPTMKPY 240
           REEFD +K +FD QVEALKARCEKKE+SFDDGDLGE  F+ DI+EA IPPKFKTPTMKPY
Sbjct: 181 REEFDQLKSKFDAQVEALKARCEKKESSFDDGDLGELSFSSDILEALIPPKFKTPTMKPY 240

Query: 241 DGSKDPKDYVVVFEGLWTFKR---------------------------------QQTQSS 300
           DGSKDPKDYV VFE L  F+                                   Q +  
Sbjct: 241 DGSKDPKDYVEVFESLMDFQAATDAIKCCAFQIALTGSARLWYRRLPARLISTYSQLRKE 300

Query: 301 AAPSRSHSPAARACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLA 360
                S     R   THL TIRQKEGETLREYVTRF EEQLKVAHCSDDSAMCYFLT LA
Sbjct: 301 FISQFSSRHYDRKTPTHLATIRQKEGETLREYVTRFPEEQLKVAHCSDDSAMCYFLTGLA 340

Query: 361 DETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKT 410
           DETLTVKL EEA  TF EVLQK KKVIDGQELLRTKTGR EK +DQGRAG++K K DSK+
Sbjct: 361 DETLTVKLREEAPATFAEVLQKTKKVIDGQELLRTKTGRPEKNIDQGRAGKDKGKADSKS 340

[Close]

BLAST of Moc05g14610 vs. ExPASy TrEMBL
Match: A0A6J1DPC9 (uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022280 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 203/316 (64.24%), Postives = 230/316 (72.78%), Query Frame = 0


Query: 100 APGEKEGRVPSLYPGDREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREF 159
           APGEK    PS+ PG+REP+PN+EGVDYSLRDNDLRKHLTDKKK+AS EPEDS S+SREF
Sbjct: 7   APGEK--GAPSIQPGNREPIPNDEGVDYSLRDNDLRKHLTDKKKKASWEPEDSLSYSREF 66

Query: 160 SNSDLKAESKYKSLTPEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPF 219
           SNS+LKA+SKYK L PEAVI REEFDLMKHRFDEQVEALKARCEKKE+ FDD DLGESPF
Sbjct: 67  SNSNLKAQSKYKPLIPEAVINREEFDLMKHRFDEQVEALKARCEKKESPFDDDDLGESPF 126

Query: 220 TPDIMEAPIPPKFKTPTMKPYDGSKDPKDYVVVFEGLWTFKRQQTQ------SSAAPSRS 279
           T DIMEAPIPPKFKTPTMKPYDGSKDPKDYV VFEGL  F+             A    +
Sbjct: 127 TSDIMEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCLAFQIALTGSA 186

Query: 280 HSPAARACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLADETLTV 339
                R  A  + T  Q   E + ++  R  + +    H +        +    DETLTV
Sbjct: 187 RLWCRRLPARSISTYSQLRKEFIGQFSFRHYDRK-TATHLAT-------IRQKEDETLTV 246

Query: 340 KLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKTKDKGST 399
           KLGEEA  TF EVLQ AKKVIDGQELLRTKT R EK++DQ R  Q+KRK DSK+KDKGS+
Sbjct: 247 KLGEEAPATFAEVLQNAKKVIDGQELLRTKTDRPEKQIDQKRLSQKKRKDDSKSKDKGSS 306

Query: 400 VSSSRAEYRRTDSDPN 410
            S SR EYRR++S P+
Sbjct: 307 SSGSRTEYRRSESGPS 312

[Close]

BLAST of Moc05g14610 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 231/448 (51.56%), Postives = 274/448 (61.16%), Query Frame = 0


Query: 1   MVQPANSANTTERRGLNADNGPQRNIDAIMVEDQTRAGQEGDLPWRSARHANQKLPPAHP 60
           MVQP +S NT +RR L A++G QR + A +VE Q   G   +   RSAR     L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  KPIEAEEGPQERPPEGLTRRQTLRLCLLSSASWMICV---IDAPGEKEGRVPSLYPGDRE 120
           KP +A  G       G +RR TL      S      +   ++A   +   +  +Y    +
Sbjct: 61  KPFKANRG-----RGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQ 120

Query: 121 PV-PNNEGVDYSLRD--NDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLT 180
            V   +   D + RD   DLR HL+ K+  + R+     S S    NS+ +AES Y  + 
Sbjct: 121 AVGAGSRSEDRAARDERGDLRDHLSRKRSSSLRK---GRSPSCSHKNSNQQAESSYNPVV 180

Query: 181 PEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKT 240
           PE VITREEFD +K +FD QVE LKARCE K ++FDDGDLGESPFT DI+EA IP KFKT
Sbjct: 181 PEGVITREEFDQLKSKFDAQVETLKARCEVKGSTFDDGDLGESPFTSDILEALIPSKFKT 240

Query: 241 PTMKPYDGSKDPKDYVVVFEGLWTFKR----------QQTQSSAA-------PSRSHSPA 300
           PTMKPYDGSKDPKDYV VFEGL  F+           Q   +S+A       P+RS S  
Sbjct: 241 PTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIKYRAFQIALTSSARLWYRRLPARSISTY 300

Query: 301 A----------------RACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCY 360
           +                R  ATHL TIRQKE ETLREYVT FQEEQLKVAH SDDSA+CY
Sbjct: 301 SQLRKEFNSQFSSRHYERKTATHLATIRQKERETLREYVTWFQEEQLKVAHYSDDSALCY 360

Query: 361 FLTCLADETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKR 410
           FLT L DETLTVKLGEEA  TF EVLQKAKKVIDGQEL RTKTGRSEK++DQ +  QEKR
Sbjct: 361 FLTDLVDETLTVKLGEEAPATFAEVLQKAKKVIDGQELFRTKTGRSEKQIDQKKPSQEKR 420

[Close]

BLAST of Moc05g14610 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.5e-87
Identity = 201/335 (60.00%), Postives = 231/335 (68.96%), Query Frame = 0


Query: 105 EGRVPSLYPGDREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDL 164
           E R   L P  +      E  +Y+ +  DLR+HL  K+  + R+ +  S   R   NS+ 
Sbjct: 36  EQRGHHLGPVKKGHPEGGEDEEYTHQRGDLREHLNRKRSSSLRKGQSPSCSHR---NSNQ 95

Query: 165 KAESKYKSLTPEAVITREEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIM 224
           +AES Y  +TPE VITREEFD +K +FD QVEALKA+CEKKE+SFDDGDLGESPFT DI+
Sbjct: 96  QAESSYNPITPEGVITREEFDQLKSKFDAQVEALKAKCEKKESSFDDGDLGESPFTSDIL 155

Query: 225 EAPIPPKFKTPTMKPYDGSKDPKDYVVVFEGLWTFKR----------QQTQSSAA----- 284
           EA IP KFKTPTMKPYDGSKDPKDYV VFEGL  F+           Q   + +A     
Sbjct: 156 EALIPLKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRDFQIALTGSARLWYR 215

Query: 285 --PSRSHSPAA----------------RACATHLVTIRQKEGETLREYVTRFQEEQLKVA 344
             P+RS S  +                R  ATHL TIRQKEGETLREYVTRFQEEQLKVA
Sbjct: 216 RLPARSISTYSQLRKEFIIQFSSRHYDRKTATHLTTIRQKEGETLREYVTRFQEEQLKVA 275

Query: 345 HCSDDSAMCYFLTCLADETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKV 404
           HCSD SAMCYFLT LADETLTVKL EEA  TFVEVLQKAKK+IDGQELLRTKT R EKK+
Sbjct: 276 HCSDHSAMCYFLTTLADETLTVKLEEEAPATFVEVLQKAKKIIDGQELLRTKTDRPEKKI 335

Query: 405 DQGRAGQEKRKTDSKTKDKGSTVSSSRAEYRRTDS 407
           DQGRA ++K KTDSKT+DKG +  SSR  YRR+D+
Sbjct: 336 DQGRASKDKGKTDSKTRDKGPSSFSSRVNYRRSDN 367

[Close]

BLAST of Moc05g14610 vs. ExPASy TrEMBL
Match: A0A6J1DM55 (uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022267 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 5.9e-87
Identity = 196/320 (61.25%), Postives = 230/320 (71.88%), Query Frame = 0


Query: 123 EGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLTPEAVITRE 182
           E  +Y+ +  DLR+HL  K+  + R+ +  SS  R   NS+ +AES Y  +TP+ VITRE
Sbjct: 33  EDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHR---NSNQQAESSYNPITPKRVITRE 92

Query: 183 EFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKTPTMKPYDG 242
           EFD +K +FD QVEALKA CEKKE+SFDDGDLGE PFT DI+EAPI PKFKTPTMKPYDG
Sbjct: 93  EFDQLKSKFDAQVEALKANCEKKESSFDDGDLGELPFTLDILEAPIHPKFKTPTMKPYDG 152

Query: 243 SKDPKDYVVVFEGLWTFKR----------QQTQSSAA-------PSRSHSPAA------- 302
           SK+PKDYV VFEGL  F+           Q   + +A       P+RS S  +       
Sbjct: 153 SKNPKDYVKVFEGLMNFQAATDAIKCRAFQIAFTGSARLWYRRLPARSISTYSQLRKEFI 212

Query: 303 ---------RACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLADE 362
                    R  ATHL TIRQK+GETLREYVTRFQEEQLKVAHCSDDSAMCYFLT LAD+
Sbjct: 213 SQFSSRYYDRKTATHLATIRQKKGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADK 272

Query: 363 TLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKTKD 410
           TLTVKLGEEA  TF EVLQKAKKVIDGQELLRTKTGR EKK+DQ R G++K K  SK++D
Sbjct: 273 TLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKKIDQRRVGKDKGKAYSKSRD 332

[Close]

BLAST of Moc05g14610 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 7.4e-82
Identity = 209/442 (47.29%), Postives = 232/442 (52.49%), Query Frame = 0


Query: 1   MVQPANSANTTERRGLNADNGPQRNIDAIMVEDQTRAGQEGDLPWRSARHANQKLPPAHP 60
           MVQPANS NT +RR L A++G QR + A +VE Q       +   RSAR     LPPAHP
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61  KPIEAEEGPQERPPEGLTRRQTLRLCLLSSASWMICVIDAPGEKEGRVPSLYPGDREPVP 120
           KP                                                          
Sbjct: 61  KP---------------------------------------------------------- 120

Query: 121 NNEGVDYSLRDNDLRKHLTDKKKRASREPEDSSSFSREFSNSDLKAESKYKSLTPEAVIT 180
                                                       KAES Y  +TP  VIT
Sbjct: 121 -------------------------------------------SKAESSYNPITP-GVIT 180

Query: 181 REEFDLMKHRFDEQVEALKARCEKKENSFDDGDLGESPFTPDIMEAPIPPKFKTPTMKPY 240
           REEFD +K +FD QVEALKARCEKKE+SFDDGDLGE  F+ DI+EA IPPKFKTPTMKPY
Sbjct: 181 REEFDQLKSKFDAQVEALKARCEKKESSFDDGDLGELSFSSDILEALIPPKFKTPTMKPY 240

Query: 241 DGSKDPKDYVVVFEGLWTFKR---------------------------------QQTQSS 300
           DGSKDPKDYV VFE L  F+                                   Q +  
Sbjct: 241 DGSKDPKDYVEVFESLMDFQAATDAIKCCAFQIALTGSARLWYRRLPARLISTYSQLRKE 300

Query: 301 AAPSRSHSPAARACATHLVTIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTCLA 360
                S     R   THL TIRQKEGETLREYVTRF EEQLKVAHCSDDSAMCYFLT LA
Sbjct: 301 FISQFSSRHYDRKTPTHLATIRQKEGETLREYVTRFPEEQLKVAHCSDDSAMCYFLTGLA 340

Query: 361 DETLTVKLGEEALTTFVEVLQKAKKVIDGQELLRTKTGRSEKKVDQGRAGQEKRKTDSKT 410
           DETLTVKL EEA  TF EVLQK KKVIDGQELLRTKTGR EK +DQGRAG++K K DSK+
Sbjct: 361 DETLTVKLREEAPATFAEVLQKTKKVIDGQELLRTKTGRPEKNIDQGRAGKDKGKADSKS 340

The following BLAST results are available for this feature:

BLAST of Moc05g14610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155139.1	2.5e-92	64.24	uncharacterized protein LOC111022280 [Momordica charantia]	[more]
XP_022159327.1	6.9e-90	51.56	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	3.2e-87	60.00	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022155128.1	1.2e-86	61.25	uncharacterized protein LOC111022267 [Momordica charantia]	[more]
XP_022152854.1	1.5e-81	47.29	uncharacterized protein LOC111020479 [Momordica charantia]	[more]

BLAST of Moc05g14610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g14610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPC9	1.2e-92	64.24	uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DZJ1	3.3e-90	51.56	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	1.5e-87	60.00	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DM55	5.9e-87	61.25	uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DHB3	7.4e-82	47.29	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Moc05g14610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g14610.1	Moc05g14610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity