Moc05g14170 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g14170
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationchr5: 10796068 .. 10796616 (+)
RNA-Seq ExpressionMoc05g14170
SyntenyMoc05g14170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCAGATTGTCAAGGAGAGCGCAACAAAGCTAAAATGGGAGCATTTCTGTGTGCCCTTTATGCCGCTGCTGACGGGGCTAGTGCGAGAGTTTTACGCCAACTGTGATGCTGACAGAGTGGGACGCACAGTGGTGCGGGAGGTCGAAGTGGACTGGACACCTGAGCGAATCAACAAGGTCCTCAAGCTGTCGAGCAACCCCTACGCCGAGTTTAATGAGTTTGTCCAGCAACCATCTATCAGAGAGCTTGATCATGCCCTGTAGCTGGTAGGAGTAGAAGGCGCATCTTGGCAGATCACAGAAAAATGTGCCCGCTCCTTAAAGTCTGGTCAACTCACTACTGAAGCAAATGTGTGGCTCTACTTTGTTAAGAGCCGAATCATGCCAACAACGCATGATTCGTCTGTTACAAAGGACATGGTCCTTCTGTTGGCTTGCATCTTGGAGGGGCATTCTATTGACGTTGGCCAGCTTATTCATCGGGAGATCGCCCATTGTGCAGCAAAAAGATCTGGTCGTCTATTTTTTCCAAGCCTCATCGCCTGA

mRNA sequence

ATGCCCCAGATTGTCAAGGAGAGCGCAACAAAGCTAAAATGGGAGCATTTCTGTGTGCCCTTTATGCCGCTGCTGACGGGGCTAGTGCGAGAGTTTTACGCCAACTGTGATGCTGACAGAGTGGGACGCACAGTGGTGCGGGAGGTCGAAGTGGACTGGACACCTGAGCGAATCAACAAGCTGGTAGGAGTAGAAGGCGCATCTTGGCAGATCACAGAAAAATGTGCCCGCTCCTTAAAGTCTGGTCAACTCACTACTGAAGCAAATGTGTGGCTCTACTTTGTTAAGAGCCGAATCATGCCAACAACGCATGATTCGTCTGTTACAAAGGACATGGTCCTTCTGTTGGCTTGCATCTTGGAGGGGCATTCTATTGACGTTGGCCAGCTTATTCATCGGGAGATCGCCCATTGTGCAGCAAAAAGATCTGGTCGTCTATTTTTTCCAAGCCTCATCGCCTGA

Coding sequence (CDS)

ATGCCCCAGATTGTCAAGGAGAGCGCAACAAAGCTAAAATGGGAGCATTTCTGTGTGCCCTTTATGCCGCTGCTGACGGGGCTAGTGCGAGAGTTTTACGCCAACTGTGATGCTGACAGAGTGGGACGCACAGTGGTGCGGGAGGTCGAAGTGGACTGGACACCTGAGCGAATCAACAAGCTGGTAGGAGTAGAAGGCGCATCTTGGCAGATCACAGAAAAATGTGCCCGCTCCTTAAAGTCTGGTCAACTCACTACTGAAGCAAATGTGTGGCTCTACTTTGTTAAGAGCCGAATCATGCCAACAACGCATGATTCGTCTGTTACAAAGGACATGGTCCTTCTGTTGGCTTGCATCTTGGAGGGGCATTCTATTGACGTTGGCCAGCTTATTCATCGGGAGATCGCCCATTGTGCAGCAAAAAGATCTGGTCGTCTATTTTTTCCAAGCCTCATCGCCTGA

Protein sequence

MPQIVKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKLVGVEGASWQITEKCARSLKSGQLTTEANVWLYFVKSRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLIA
Homology
BLAST of Moc05g14170 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-23
Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 0

Query: 5   VKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKLVGV 64
           + +  T+  W+ FC      +  LVREFYAN          VR V+V W+ E IN + G+
Sbjct: 63  IAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGL 122

Query: 65  ----------------------------EGASWQITEKCARSLKSGQLTTEANVWLYFVK 124
                                        GA W ++ + A +     LT  A VW +F+K
Sbjct: 123 GDPVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLK 182

Query: 125 SRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           SR++PTTH  +V+KD +LLL  +L G SI+VG++IH EI  CAA+++G LFFPSLI
Sbjct: 183 SRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLI 238

BLAST of Moc05g14170 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-23
Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = 0

Query: 5   VKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTV-VREVEVDWTPERINKLVG 64
           + +  T+  W+ FC      +  LVREFYAN   D V  TV VR V+V W+ E IN + G
Sbjct: 54  IAQVITQHNWKQFCAHPEDPIVPLVREFYANL-TDPVENTVYVRGVQVSWSEEAINAVFG 113

Query: 65  ----------------------------VEGASWQITEKCARSLKSGQLTTEANVWLYFV 124
                                       V GA W ++ + A +     LT  A VW +F+
Sbjct: 114 LGDPVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFL 173

Query: 125 KSRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           KS ++PTTH  +V+KD +LLL  +L G SI+VG++IH EI  CAA+++G LFFPSLI
Sbjct: 174 KSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLI 229

BLAST of Moc05g14170 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 110.9 bits (276), Expect = 9.7e-21
Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 0

Query: 19  VPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKLVGV-------------- 78
           + F+P    LVREFYAN          VR V+V W+ E IN + G+              
Sbjct: 11  IQFLP----LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENI 70

Query: 79  --------------EGASWQITEKCARSLKSGQLTTEANVWLYFVKSRIMPTTHDSSVTK 138
                          GA W ++ + A +     LT  A VW +F+KSR++PTTH   V+K
Sbjct: 71  TEPELITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSK 130

Query: 139 DMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           D +LLL  +L G SI+VG++IH EI  CAA+++G LFFPSLI
Sbjct: 131 DRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLI 168

BLAST of Moc05g14170 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20
Identity = 62/179 (34.64%), Postives = 89/179 (49.72%), Query Frame = 0

Query: 2   PQIVKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKL 61
           P  + +   +  W+ FC      +  LVREFY N          +R V+V  + E IN +
Sbjct: 81  PPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTI 140

Query: 62  ----------------------------VGVEGASWQITEKCARSLKSGQLTTEANVWLY 121
                                       V + GA W ++ + A +     L   A VW +
Sbjct: 141 FSLGDPIDEHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYH 200

Query: 122 FVKSRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           F+KSR++PTTH  +V+K+ V LL  +L G SI+VG++IHREI  CAA++SG LFFPSLI
Sbjct: 201 FLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLI 259

BLAST of Moc05g14170 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-18
Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 0

Query: 28  LVREFYANCDADRVGRTVVREVEVDWTPERINKLVG------------------------ 87
           LVREFY N          VR V+V  + E IN + G                        
Sbjct: 3   LVREFYTNLTNPDDDTVYVRGVQVPLSAEAINTIYGLGDLVDEHSEFVEDITEPELAMVL 62

Query: 88  ----VEGASWQITEKCARSLKSGQLTTEANVWLYFVKSRIMPTTHDSSVTKDMVLLLACI 147
               + GA W ++ +   +     L   A +W +F+KSR++PTTH   V+K+ VLLL  +
Sbjct: 63  ETVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSM 122

Query: 148 LEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           L G SI++G++IHREI  CAA++SG LFFPSLI
Sbjct: 123 LTGKSINMGRMIHREICACAARKSGALFFPSLI 155

BLAST of Moc05g14170 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-23
Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 0

Query: 5   VKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKLVGV 64
           + +  T+  W+ FC      +  LVREFYAN          VR V+V W+ E IN + G+
Sbjct: 63  IAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGL 122

Query: 65  ----------------------------EGASWQITEKCARSLKSGQLTTEANVWLYFVK 124
                                        GA W ++ + A +     LT  A VW +F+K
Sbjct: 123 GDPVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLK 182

Query: 125 SRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           SR++PTTH  +V+KD +LLL  +L G SI+VG++IH EI  CAA+++G LFFPSLI
Sbjct: 183 SRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLI 238

BLAST of Moc05g14170 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-23
Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = 0

Query: 5   VKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTV-VREVEVDWTPERINKLVG 64
           + +  T+  W+ FC      +  LVREFYAN   D V  TV VR V+V W+ E IN + G
Sbjct: 54  IAQVITQHNWKQFCAHPEDPIVPLVREFYANL-TDPVENTVYVRGVQVSWSEEAINAVFG 113

Query: 65  ----------------------------VEGASWQITEKCARSLKSGQLTTEANVWLYFV 124
                                       V GA W ++ + A +     LT  A VW +F+
Sbjct: 114 LGDPVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFL 173

Query: 125 KSRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           KS ++PTTH  +V+KD +LLL  +L G SI+VG++IH EI  CAA+++G LFFPSLI
Sbjct: 174 KSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLI 229

BLAST of Moc05g14170 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.7e-21
Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 0

Query: 19  VPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKLVGV-------------- 78
           + F+P    LVREFYAN          VR V+V W+ E IN + G+              
Sbjct: 11  IQFLP----LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENI 70

Query: 79  --------------EGASWQITEKCARSLKSGQLTTEANVWLYFVKSRIMPTTHDSSVTK 138
                          GA W ++ + A +     LT  A VW +F+KSR++PTTH   V+K
Sbjct: 71  TEPELITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSK 130

Query: 139 DMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           D +LLL  +L G SI+VG++IH EI  CAA+++G LFFPSLI
Sbjct: 131 DRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLI 168

BLAST of Moc05g14170 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.1e-21
Identity = 62/179 (34.64%), Postives = 89/179 (49.72%), Query Frame = 0

Query: 2   PQIVKESATKLKWEHFCVPFMPLLTGLVREFYANCDADRVGRTVVREVEVDWTPERINKL 61
           P  + +   +  W+ FC      +  LVREFY N          +R V+V  + E IN +
Sbjct: 81  PPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTI 140

Query: 62  ----------------------------VGVEGASWQITEKCARSLKSGQLTTEANVWLY 121
                                       V + GA W ++ + A +     L   A VW +
Sbjct: 141 FSLGDPIDEHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYH 200

Query: 122 FVKSRIMPTTHDSSVTKDMVLLLACILEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           F+KSR++PTTH  +V+K+ V LL  +L G SI+VG++IHREI  CAA++SG LFFPSLI
Sbjct: 201 FLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLI 259

BLAST of Moc05g14170 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 0

Query: 28  LVREFYANCDADRVGRTVVREVEVDWTPERINKLVG------------------------ 87
           LVREFY N          VR V+V  + E IN + G                        
Sbjct: 3   LVREFYTNLTNPDDDTVYVRGVQVPLSAEAINTIYGLGDLVDEHSEFVEDITEPELAMVL 62

Query: 88  ----VEGASWQITEKCARSLKSGQLTTEANVWLYFVKSRIMPTTHDSSVTKDMVLLLACI 147
               + GA W ++ +   +     L   A +W +F+KSR++PTTH   V+K+ VLLL  +
Sbjct: 63  ETVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSM 122

Query: 148 LEGHSIDVGQLIHREIAHCAAKRSGRLFFPSLI 153
           L G SI++G++IHREI  CAA++SG LFFPSLI
Sbjct: 123 LTGKSINMGRMIHREICACAARKSGALFFPSLI 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.13.5e-2336.93hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON35554.16.1e-2338.98hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
PON78020.19.7e-2138.89hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON70375.11.3e-2034.64hypothetical protein PanWU01x14_080440 [Parasponia andersonii][more]
PON50458.13.4e-1837.25hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG41.7e-2336.93Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5AGA52.9e-2338.98Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DXM34.7e-2138.89Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5DAQ26.1e-2134.64Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... [more]
A0A2P5BNT01.7e-1837.25Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g14170.1Moc05g14170.1mRNA