Moc05g13320 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13320
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	bud site selection protein 4 isoform X3
Location	chr5: 10200718 .. 10201541 (-)
RNA-Seq Expression	Moc05g13320
Synteny	Moc05g13320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCACCTTGCCAAAAGAGTCGAGAGAAGGCATCAAAGAGAATCATCGAGGTATGTTGACCCTAAACCTATTCCTCGTGTAATTCCAAATTTTGGAAAGGTTAGTGTACCTACTTTAGTCCCAATGGTAGAAATTAATGAGCATGATATACTTTGTGAAACTATGTATGGAATGCCTACTACTAGTACTAGAGAAGTATTGCATGACTTAAATTCTATTGATAAGGAAGAAAGTAAGATGATTGATGAGATGCTTTGTGATAATATGCATGTTGATCCTATTTCATTAGATTGCAAAGTATTACATGATTCTATGCCTATTGTTGAAAAGGTAAGTGGTTTAGTTGAATATAAAATAACTTGTGAATCTAAACATGAAATTCCTAATCCCATAGATTACAAGTTGTTGCATGACATCTTACCTATTATTGAGGAACAGTGTGGTGAGAAAGAAGAAGACATGTTGTGTGAAACCATGCATGAAGTTTATATTCCCATTAGTAACAAAGTAGTACATGAAGTAAATGAGAATGAGAGTAGTATGGTAGAAAAAGTGATACTTAGTGATTCTATGCACAACATTTTTAATTGCTTAGATCACAAAGATTCTTTTGATTGTGAAATACCTACTTTTGGTTTGGGTATGGTCTAACAATCGAGTTTTTTGCAGACCACTCCCATTTTCTATCGGTGATTGGGCAGCTGAAAGAAATTGCTAATAAGGCAAAACAGGAGGCTAATCAAGATGAGTTGACTGAAAATACTAGGGATGAGGAACTGCCAGAGTTGTCTCCTGAAAATACGTATGTTTGCTTTCTCTAG

mRNA sequence

ATGTTGCACCTTGCCAAAAGAGTCGAGAGAAGGCATCAAAGAGAATCATCGAGGTATGTTGACCCTAAACCTATTCCTCGTGTAATTCCAAATTTTGGAAAGGTTAGTGTACCTACTTTAGTCCCAATGGTAGAAATTAATGAGCATGATATACTTTGTGAAACTATGTATGGAATGCCTACTACTAGTACTAGAGAAGTATTGCATGACTTAAATTCTATTGATAAGGAAGAAAGTAAGATGATTGATGAGATGCTTTGTGATAATATGCATGTTGATCCTATTTCATTAGATTGCAAAGTATTACATGATTCTATGCCTATTGTTGAAAAGTGTGGTGAGAAAGAAGAAGACATGTTGTGTGAAACCATGCATGAAGTTTATATTCCCATTAGTAACAAAGTAGTACATGAAGTAAATGAGAATGAGAGTAACCACTCCCATTTTCTATCGGTGATTGGGCAGCTGAAAGAAATTGCTAATAAGGCAAAACAGGAGGCTAATCAAGATGAGTTGACTGAAAATACTAGGGATGAGGAACTGCCAGAGTTGTCTCCTGAAAATACGTATGTTTGCTTTCTCTAG

Coding sequence (CDS)

ATGTTGCACCTTGCCAAAAGAGTCGAGAGAAGGCATCAAAGAGAATCATCGAGGTATGTTGACCCTAAACCTATTCCTCGTGTAATTCCAAATTTTGGAAAGGTTAGTGTACCTACTTTAGTCCCAATGGTAGAAATTAATGAGCATGATATACTTTGTGAAACTATGTATGGAATGCCTACTACTAGTACTAGAGAAGTATTGCATGACTTAAATTCTATTGATAAGGAAGAAAGTAAGATGATTGATGAGATGCTTTGTGATAATATGCATGTTGATCCTATTTCATTAGATTGCAAAGTATTACATGATTCTATGCCTATTGTTGAAAAGTGTGGTGAGAAAGAAGAAGACATGTTGTGTGAAACCATGCATGAAGTTTATATTCCCATTAGTAACAAAGTAGTACATGAAGTAAATGAGAATGAGAGTAACCACTCCCATTTTCTATCGGTGATTGGGCAGCTGAAAGAAATTGCTAATAAGGCAAAACAGGAGGCTAATCAAGATGAGTTGACTGAAAATACTAGGGATGAGGAACTGCCAGAGTTGTCTCCTGAAAATACGTATGTTTGCTTTCTCTAG

Protein sequence

MLHLAKRVERRHQRESSRYVDPKPIPRVIPNFGKVSVPTLVPMVEINEHDILCETMYGMPTTSTREVLHDLNSIDKEESKMIDEMLCDNMHVDPISLDCKVLHDSMPIVEKCGEKEEDMLCETMHEVYIPISNKVVHEVNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPENTYVCFL

Homology

[Close]

BLAST of Moc05g13320 vs. NCBI nr
Match: XP_022141623.1 (bud site selection protein 4 isoform X3 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 642 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 690

[Close]

BLAST of Moc05g13320 vs. NCBI nr
Match: XP_022141622.1 (uncharacterized protein LOC111011932 isoform X2 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 643 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 691

[Close]

BLAST of Moc05g13320 vs. NCBI nr
Match: XP_022141624.1 (uncharacterized protein LOC111011932 isoform X4 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 640 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 688

[Close]

BLAST of Moc05g13320 vs. NCBI nr
Match: XP_022141619.1 (uncharacterized protein LOC111011932 isoform X1 [Momordica charantia] >XP_022141620.1 uncharacterized protein LOC111011932 isoform X1 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 645 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 693

[Close]

BLAST of Moc05g13320 vs. NCBI nr
Match: XP_022990943.1 (uncharacterized protein LOC111487681 [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-10
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 122 ETMHEVYIPISNKVVHE-------VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTE 181
           +T H++ +   N+  H        V    ++HS FLS+IGQLKE ANKAKQE+NQDELTE
Sbjct: 614 KTRHQIKLKFKNEERHHPFRLSDAVTNRATDHSQFLSLIGQLKEAANKAKQESNQDELTE 673

Query: 182 NTRDEELPELSPE 188
           NT DEELPELSPE
Sbjct: 674 NTGDEELPELSPE 686

[Close]

BLAST of Moc05g13320 vs. ExPASy TrEMBL
Match: A0A6J1CIL9 (uncharacterized protein LOC111011932 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011932 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 645 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 693

[Close]

BLAST of Moc05g13320 vs. ExPASy TrEMBL
Match: A0A6J1CKC3 (uncharacterized protein LOC111011932 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011932 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 643 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 691

[Close]

BLAST of Moc05g13320 vs. ExPASy TrEMBL
Match: A0A6J1CJ72 (uncharacterized protein LOC111011932 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111011932 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 640 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 688

[Close]

BLAST of Moc05g13320 vs. ExPASy TrEMBL
Match: A0A6J1CL20 (bud site selection protein 4 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011932 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-11
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 139 VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTENTRDEELPELSPE 188
           +    ++HSHFLSVIGQLKE ANKAKQEANQDELTENT DEELPELSPE
Sbjct: 642 ITNRANDHSHFLSVIGQLKEAANKAKQEANQDELTENTGDEELPELSPE 690

[Close]

BLAST of Moc05g13320 vs. ExPASy TrEMBL
Match: A0A6J1JUR8 (uncharacterized protein LOC111487681 OS=Cucurbita maxima OX=3661 GN=LOC111487681 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.3e-11
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 122 ETMHEVYIPISNKVVHE-------VNENESNHSHFLSVIGQLKEIANKAKQEANQDELTE 181
           +T H++ +   N+  H        V    ++HS FLS+IGQLKE ANKAKQE+NQDELTE
Sbjct: 614 KTRHQIKLKFKNEERHHPFRLSDAVTNRATDHSQFLSLIGQLKEAANKAKQESNQDELTE 673

Query: 182 NTRDEELPELSPE 188
           NT DEELPELSPE
Sbjct: 674 NTGDEELPELSPE 686

The following BLAST results are available for this feature:

BLAST of Moc05g13320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141623.1	4.0e-11	81.63	bud site selection protein 4 isoform X3 [Momordica charantia]	[more]
XP_022141622.1	4.0e-11	81.63	uncharacterized protein LOC111011932 isoform X2 [Momordica charantia]	[more]
XP_022141624.1	4.0e-11	81.63	uncharacterized protein LOC111011932 isoform X4 [Momordica charantia]	[more]
XP_022141619.1	4.0e-11	81.63	uncharacterized protein LOC111011932 isoform X1 [Momordica charantia] >XP_022141...	[more]
XP_022990943.1	1.5e-10	57.53	uncharacterized protein LOC111487681 [Cucurbita maxima]	[more]

BLAST of Moc05g13320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g13320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIL9	1.9e-11	81.63	uncharacterized protein LOC111011932 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CKC3	1.9e-11	81.63	uncharacterized protein LOC111011932 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CJ72	1.9e-11	81.63	uncharacterized protein LOC111011932 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CL20	1.9e-11	81.63	bud site selection protein 4 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1JUR8	7.3e-11	57.53	uncharacterized protein LOC111487681 OS=Cucurbita maxima OX=3661 GN=LOC111487681...	[more]

BLAST of Moc05g13320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13320.1	Moc05g13320.1	mRNA